Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,829,419	C→T	R446C (CGC→TGC)	yicH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,829,419	0	C	T	100.0%	1351.5 / NA	373	R446C (CGC→TGC)	yicH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (148/225); total (148/225)

Only 100 of 406 total aligned reads displayed.

ACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACC  >  NC_000913/3829329‑3829508

aCGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGc                                                                                         >  2:142223/1‑93 (MQ=255)

 cGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGcc                                                                                        <  1:3107113/93‑1 (MQ=255)

   cTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGCGTTGATGTTGGTTGCCCg                                                                                      >  2:2054674/1‑93 (MQ=255)

    tGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGGTCGTTGCCCGt                                                                                     >  2:6308176/1‑93 (MQ=255)

    tGGGTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCTAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGt                                                                                     <  1:782893/93‑1 (MQ=255)

     ggTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTc                                                                                    >  2:2936613/1‑93 (MQ=255)

     ggTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACACTCAAATGTGTTGATTTTCGTTGCCCGTc                                                                                    >  1:7044182/1‑93 (MQ=255)

       ttACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGGCGCCGCCGCGACATTCAATCGTGTTTGTGTTTGTTGCCCGTCGc                                                                                  >  2:3133899/1‑93 (MQ=255)

       ttACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGc                                                                                  >  1:2806798/1‑93 (MQ=255)

         aCCGATCATAAATGGGGCGTCTGGAGTGGCTCCGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTTGTTCCCCGTCGCTg                                                                                >  2:5889322/1‑93 (MQ=255)

            gATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGgcg                                                                             <  2:6831868/93‑1 (MQ=255)

            gATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGgcg                                                                             <  2:1645036/93‑1 (MQ=255)

             aTCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGgcgc                                                                            <  1:1003700/93‑1 (MQ=255)

              tCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCt                                                                           <  2:5011762/93‑1 (MQ=255)

               cATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTg                                                                          >  1:6580322/1‑93 (MQ=255)

                aTAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGa                                                                         >  1:1262911/1‑93 (MQ=255)

                 tAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAc                                                                        >  2:3761523/1‑93 (MQ=255)

                 tAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAc                                                                        <  1:4529921/93‑1 (MQ=255)

                   aaTGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCg                                                                      >  1:3514161/1‑93 (MQ=255)

                    aTGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGc                                                                     >  1:2987685/1‑93 (MQ=255)

                     tGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGcc                                                                    <  1:3385993/93‑1 (MQ=255)

                       gggCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATGGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCaa                                                                  <  2:3912652/93‑1 (MQ=255)

                       gggCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCaa                                                                  <  2:6665434/93‑1 (MQ=255)

                           gTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAAcagc                                                              <  1:488212/93‑1 (MQ=255)

                           gTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAAcagc                                                              >  1:3445557/1‑93 (MQ=255)

                            tCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAAcagca                                                             >  2:4913089/1‑93 (MQ=255)

                            tCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAAcagca                                                             >  1:1679814/1‑93 (MQ=255)

                              tGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACagcagc                                                           <  2:4020191/93‑1 (MQ=255)

                              tGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACagcagc                                                           <  1:458261/93‑1 (MQ=255)

                              tGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACagcagc                                                           <  1:5090241/93‑1 (MQ=255)

                               ggAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAgcagca                                                          <  2:2763156/93‑1 (MQ=255)

                                   tGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGt                                                      <  1:5454309/93‑1 (MQ=255)

                                     gCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGGTGCCCGCCAAAAGCAGCACGGGGa                                                    >  2:4312273/1‑93 (MQ=255)

                                     gCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGa                                                    <  1:1727806/93‑1 (MQ=255)

                                      cTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGaa                                                   <  2:5732616/93‑1 (MQ=255)

                                       tCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAat                                                  >  2:4937179/1‑93 (MQ=255)

                                       tCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAat                                                  >  2:1542949/1‑93 (MQ=255)

                                        cGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAata                                                 <  2:7796617/93‑1 (MQ=255)

                                          gCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATc                                               >  1:7533674/1‑93 (MQ=255)

                                            gAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAg                                             <  2:255879/93‑1 (MQ=255)

                                             aaTCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGc                                            <  2:6134456/93‑1 (MQ=255)

                                             aaTCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGc                                            >  2:843398/1‑93 (MQ=255)

                                              aTCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCg                                           >  1:2450739/1‑93 (MQ=255)

                                              aTCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCg                                           <  2:1511481/93‑1 (MQ=255)

                                               tCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGa                                          >  1:6495075/1‑93 (MQ=255)

                                               tCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGa                                          >  1:531034/1‑93 (MQ=255)

                                               tCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGa                                          >  2:1768472/1‑93 (MQ=255)

                                                 tGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAc                                        <  1:1066713/93‑1 (MQ=255)

                                                 tGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAc                                        <  1:1562826/93‑1 (MQ=255)

                                                     tGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAg                                    <  1:7589035/93‑1 (MQ=255)

                                                      gccgccgccGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGt                                   <  2:3521269/93‑1 (MQ=255)

                                                      gccgccgccGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGt                                   >  2:4358355/1‑93 (MQ=255)

                                                      gccgccgccGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGt                                   >  1:620041/1‑93 (MQ=255)

                                                      gccgccgccGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGt                                   <  2:1258513/93‑1 (MQ=255)

                                                      gccgccgccGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGt                                   <  1:717651/93‑1 (MQ=255)

                                                       ccgccgccgCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTg                                  <  2:6473247/93‑1 (MQ=255)

                                                         gccgccgcGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCa                                <  1:4194063/93‑1 (MQ=255)

                                                          ccgccgcGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAt                               <  1:7369987/93‑1 (MQ=255)

                                                           cgccgcGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAtt                              <  1:4844382/93‑1 (MQ=255)

                                                               gcgACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACt                          >  2:2171205/1‑93 (MQ=255)

                                                                 gACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGa                        <  1:2557990/93‑1 (MQ=255)

                                                                     ttCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGaaaaa                    >  2:716891/1‑93 (MQ=255)

                                                                     ttCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGGGAATATCAGCGAACTGAGTGCATTTACTGaaaag                    >  2:6739662/1‑92 (MQ=255)

                                                                      tCAATCGTGTTGATGTTCGTTGCCCGTCGGTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAg                   >  2:3342791/1‑93 (MQ=255)

                                                                      tCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAg                   <  1:5989293/93‑1 (MQ=255)

                                                                      tCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAg                   <  1:5628725/93‑1 (MQ=255)

                                                                       cAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAgg                  <  2:4550796/93‑1 (MQ=255)

                                                                       cAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAgg                  >  1:3745901/1‑93 (MQ=255)

                                                                         aTCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCa                <  2:1009926/93‑1 (MQ=255)

                                                                         aTCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCa                <  1:4421946/93‑1 (MQ=255)

                                                                          tCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCAt               <  1:3615064/93‑1 (MQ=255)

                                                                          tCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGCGAATATCAGCGCACTGAGTGCATTTACTGAAAAAGGCAt               >  2:3819507/1‑93 (MQ=255)

                                                                          tCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACAGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCAt               <  1:3942301/93‑1 (MQ=255)

                                                                           cGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCAtt              <  1:1477342/93‑1 (MQ=255)

                                                                           cGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCAtt              <  1:640663/93‑1 (MQ=255)

                                                                            gtgtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTc             >  2:2422798/1‑93 (MQ=255)

                                                                            gtgtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTc             <  2:1924763/93‑1 (MQ=255)

                                                                            gtgtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTc             <  1:263919/93‑1 (MQ=255)

                                                                             tgtTGATGTTCGTTGCCCGTCTGTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCt            >  1:1370866/1‑93 (MQ=255)

                                                                             tgtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGCGTGCATTTACTGAAAAAGGCATTCt            >  2:7068575/1‑93 (MQ=255)

                                                                             tgtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCt            >  1:4948776/1‑93 (MQ=255)

                                                                             tgtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGCGCATTTACTGAAAAAGGCATTCt            >  2:200785/1‑93 (MQ=255)

                                                                              gtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTg           <  2:160508/93‑1 (MQ=255)

                                                                              gtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTg           >  1:4039582/1‑93 (MQ=255)

                                                                                tGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGa         <  2:5178418/93‑1 (MQ=255)

                                                                                tGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGa         <  2:5292950/93‑1 (MQ=255)

                                                                                tGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGa         <  1:5897400/93‑1 (MQ=255)

                                                                                 gATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGaa        <  1:7419979/93‑1 (MQ=255)

                                                                                   tGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGc      >  1:1197251/1‑93 (MQ=255)

                                                                                   tGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGc      <  2:2266015/93‑1 (MQ=255)

                                                                                    gTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGcc     <  1:6909067/93‑1 (MQ=255)

                                                                                    gTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTCAAAAAGGCATTCTGGAAgac     >  1:681253/1‑91 (MQ=255)

                                                                                     ttCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCa    >  1:2108142/1‑93 (MQ=255)

                                                                                     ttCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCa    <  2:7680667/93‑1 (MQ=255)

                                                                                     ttCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCa    <  1:929921/93‑1 (MQ=255)

                                                                                      tcgttgCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAc   >  2:5767869/1‑93 (MQ=255)

                                                                                      tcgttgCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAc   <  2:4213858/93‑1 (MQ=255)

                                                                                       cgttgCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAcc  <  1:2936614/93‑1 (MQ=255)

                                                                                       cgttgCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAcc  <  2:740148/93‑1 (MQ=255)

                                                                                       cgttgCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAcc  >  1:7696397/1‑93 (MQ=255)

ACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACC  >  NC_000913/3829329‑3829508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 227 total aligned reads displayed.

CTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCA  >  NC_000913/3829326‑3829512

CTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTT                                                                                               <  SRR4302543.3027722/94‑1 (MQ=60)

CTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTT                                                                                               <  SRR4302543.295196/94‑1 (MQ=60)

CTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTT                                                                                               >  SRR4302543.4571360/1‑94 (MQ=60)

CTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTT                                                                                               <  SRR4302543.2807783/94‑1 (MQ=60)

 TGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTG                                                                                              <  SRR4302543.7120529/94‑1 (MQ=60)

     GCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCG                                                                                          <  SRR4302543.4967195/94‑1 (MQ=60)

     GCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCG                                                                                          <  SRR4302543.3381870/94‑1 (MQ=60)

     GCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCG                                                                                          <  SRR4302543.1498974/94‑1 (MQ=60)

       TGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCTAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTC                                                                                        <  SRR4302543.789783/94‑1 (MQ=60)

       TGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACACTCAAATGTGTTGATTTTCGTTGCCCGTC                                                                                        >  SRR4302543.7112333/1‑94 (MQ=60)

       TGGGTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCTAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTC                                                                                        <  SRR4302543.789781/94‑1 (MQ=60)

         GTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGC                                                                                      >  SRR4302543.2832487/1‑94 (MQ=60)

         GTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGC                                                                                      <  SRR4302543.1459337/94‑1 (MQ=60)

          TTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGGCGCCGCCGCGACATTCAATCGTGTTTGTGTTCGTTGCCCGTCGCT                                                                                     >  SRR4302543.2562211/1‑94 (MQ=60)

          TTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCT                                                                                     <  SRR4302543.4288300/94‑1 (MQ=60)

             CCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTTGTTGCCCGTCGCTGGC                                                                                  >  SRR4302543.6581801/1‑94 (MQ=60)

               GATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGC                                                                                <  SRR4302543.2482929/94‑1 (MQ=60)

                ATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATTTGAATTCCGCCGCCGCGACATTCAATCGGGTTGATGTTCGGTGTCCGTCGCTGGGGCT                                                                               >  SRR4302543.2105865/1‑94 (MQ=60)

                ATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCT                                                                               <  SRR4302543.7881832/94‑1 (MQ=60)

                ATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCT                                                                               <  SRR4302543.342637/94‑1 (MQ=60)

                ATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCT                                                                               <  SRR4302543.1012575/94‑1 (MQ=60)

                  CATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGA                                                                             >  SRR4302543.1274217/1‑94 (MQ=60)

                  CATAAATGGGGCGTCTGAAGTGGCTCGTCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGA                                                                             <  SRR4302543.2999874/94‑1 (MQ=60)

                   ATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAC                                                                            <  SRR4302543.5126483/94‑1 (MQ=60)

                   ATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAC                                                                            <  SRR4302543.6876505/94‑1 (MQ=60)

                    TAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGGTGCCCGTCGCTGGCGCTGACC                                                                           >  SRR4302543.5408159/1‑94 (MQ=60)

                     AAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCG                                                                          >  SRR4302543.3545550/1‑94 (MQ=60)

                     AAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCG                                                                          <  SRR4302543.682547/94‑1 (MQ=60)

                     AAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCC                                                                          >  SRR4302543.496019/1‑94 (MQ=60)

                      AATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGC                                                                         >  SRR4302543.3014814/1‑94 (MQ=60)

                       ATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCC                                                                        >  SRR4302543.6602137/1‑94 (MQ=60)

                       ATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCC                                                                        >  SRR4302543.2957536/1‑94 (MQ=60)

                       ATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCC                                                                        >  SRR4302543.5841497/1‑94 (MQ=60)

                        TGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCA                                                                       <  SRR4302543.3416352/94‑1 (MQ=60)

                           GGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACA                                                                    <  SRR4302543.1317344/94‑1 (MQ=60)

                           GGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACA                                                                    <  SRR4302543.7587429/94‑1 (MQ=60)

                            GCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAG                                                                   <  SRR4302543.3496962/94‑1 (MQ=60)

                            GCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAG                                                                   >  SRR4302543.3013595/1‑94 (MQ=60)

                             CGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGC                                                                  <  SRR4302543.5419992/94‑1 (MQ=60)

                              GTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCA                                                                 >  SRR4302543.1694885/1‑94 (MQ=60)

                              GTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCA                                                                 >  SRR4302543.4500663/1‑94 (MQ=60)

                              GTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCA                                                                 <  SRR4302543.492725/94‑1 (MQ=60)

                              GTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCA                                                                 <  SRR4302543.620180/94‑1 (MQ=60)

                               TCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAG                                                                <  SRR4302543.7352599/94‑1 (MQ=60)

                               TCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAG                                                                <  SRR4302543.6548513/94‑1 (MQ=60)

                               TCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAG                                                                <  SRR4302543.3533881/94‑1 (MQ=60)

                               GCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAG                                                                <  SRR4302543.2634535/94‑1 (MQ=60)

                                CTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGC                                                               <  SRR4302543.5805533/94‑1 (MQ=60)

                                 TGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCCATCGTGGTGACGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCA                                                              >  SRR4302543.2932181/1‑94 (MQ=60)

                                 TGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCA                                                              <  SRR4302543.462517/94‑1 (MQ=60)

                                 TGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCA                                                              >  SRR4302543.3878759/1‑94 (MQ=60)

                                 TGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCA                                                              <  SRR4302543.5136366/94‑1 (MQ=60)

                                  GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAC                                                             >  SRR4302543.7442254/1‑94 (MQ=60)

                                  GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAC                                                             <  SRR4302543.725849/94‑1 (MQ=60)

                                  GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAC                                                             >  SRR4302543.5585598/1‑94 (MQ=60)

                                  GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAC                                                             <  SRR4302543.7346996/94‑1 (MQ=60)

                                   GAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACG                                                            <  SRR4302543.3487809/94‑1 (MQ=60)

                                    AGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGG                                                           <  SRR4302543.3452408/94‑1 (MQ=60)

                                      TGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTG                                                         <  SRR4302543.1262350/94‑1 (MQ=60)

                                      TGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTG                                                         <  SRR4302543.5503763/94‑1 (MQ=60)

                                      TGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTG                                                         <  SRR4302543.6237504/94‑1 (MQ=60)

                                      TGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTG                                                         >  SRR4302543.4889317/1‑94 (MQ=60)

                                        GCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGCCCGCCAACAGCAGCACGGTGAA                                                       <  SRR4302543.6012131/94‑1 (MQ=60)

                                        GCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAA                                                       <  SRR4302543.1743208/94‑1 (MQ=60)

                                          TCGGCGAATCTGAATGCCGCCGCCGCGGCATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATA                                                     >  SRR4302543.3416777/1‑94 (MQ=60)

                                          TCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATA                                                     <  SRR4302543.467008/94‑1 (MQ=60)

                                           CGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATAT                                                    <  SRR4302543.3613466/94‑1 (MQ=60)

                                           CGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATAT                                                    >  SRR4302543.3925788/1‑94 (MQ=60)

                                           CGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATAT                                                    <  SRR4302543.2485929/94‑1 (MQ=60)

                                           CGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATAT                                                    <  SRR4302543.295991/94‑1 (MQ=60)

                                            GGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATC                                                   >  SRR4302543.3980663/1‑94 (MQ=60)

                                            GGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATC                                                   >  SRR4302543.7605509/1‑94 (MQ=60)

                                            GGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATC                                                   >  SRR4302543.3558134/1‑94 (MQ=60)

                                             GCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCA                                                  <  SRR4302543.3738623/94‑1 (MQ=60)

                                             GCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCA                                                  <  SRR4302543.5427892/94‑1 (MQ=60)

                                              GGAATCGGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG                                                 <  SRR4302543.2733417/94‑1 (MQ=60)

                                              CGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG                                                 <  SRR4302543.1805953/94‑1 (MQ=60)

                                              CGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG                                                 <  SRR4302543.1159064/94‑1 (MQ=60)

                                              CGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG                                                 <  SRR4302543.6502757/94‑1 (MQ=60)

                                              CGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG                                                 <  SRR4302543.489557/94‑1 (MQ=60)

                                              CGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG                                                 <  SRR4302543.6011510/94‑1 (MQ=60)

                                               GAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGC                                                >  SRR4302543.1717494/1‑94 (MQ=60)

                                               GAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGC                                                >  SRR4302543.6323862/1‑94 (MQ=60)

                                               GAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGC                                                >  SRR4302543.5856342/1‑94 (MQ=60)

                                               GAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGC                                                >  SRR4302543.3208711/1‑94 (MQ=60)

                                               GAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGC                                                >  SRR4302543.1256537/1‑94 (MQ=60)

                                                AATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCG                                               >  SRR4302543.4209693/1‑94 (MQ=60)

                                                AATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCG                                               <  SRR4302543.6374689/94‑1 (MQ=60)

                                                AATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCG                                               >  SRR4302543.5646926/1‑94 (MQ=60)

                                                AATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCG                                               >  SRR4302543.2472846/1‑94 (MQ=60)

                                                 ATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGA                                              >  SRR4302543.4907220/1‑94 (MQ=60)

                                                 ATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGA                                              >  SRR4302543.6556263/1‑94 (MQ=60)

                                                   CTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAC                                            <  SRR4302543.4719463/94‑1 (MQ=60)

                                                   CTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAC                                            >  SRR4302543.1066880/1‑94 (MQ=60)

                                                   CTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAC                                            <  SRR4302543.1704874/94‑1 (MQ=60)

                                                   CTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAC                                            >  SRR4302543.4988547/1‑94 (MQ=60)

                                                   CTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAC                                            >  SRR4302543.1565092/1‑94 (MQ=60)

                                                   CTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAC                                            <  SRR4302543.1480799/94‑1 (MQ=60)

                                                   CTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAC                                            >  SRR4302543.301501/1‑94 (MQ=60)

                                                    TGAATGCCGCGGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACT                                           <  SRR4302543.1076301/94‑1 (MQ=60)

                                                    TGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACT                                           <  SRR4302543.1576781/94‑1 (MQ=60)

                                                    TGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACT                                           <  SRR4302543.1076300/94‑1 (MQ=60)

                                                    TGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACT                                           <  SRR4302543.5228963/94‑1 (MQ=60)

                                                    TGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACT                                           <  SRR4302543.3591187/94‑1 (MQ=60)

                                                    GGAATGCGGCCGCCGCGACATTCAATCGTGGTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAAGATCAGCGAACT                                           <  SRR4302543.1076299/94‑1 (MQ=60)

                                                     GAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTG                                          <  SRR4302543.416658/94‑1 (MQ=60)

                                                     GAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTG                                          >  SRR4302543.1621741/1‑94 (MQ=60)

                                                     GAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTG                                          <  SRR4302543.554117/94‑1 (MQ=60)

                                                     GAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAACGCCAACAGCAGCACGGTGAATATCAGCGAACTG                                          >  SRR4302543.4881215/1‑94 (MQ=60)

                                                     GAACGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTG                                          <  SRR4302543.7201095/94‑1 (MQ=60)

                                                      AATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGA                                         >  SRR4302543.3989254/1‑94 (MQ=60)

                                                       ATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAG                                        <  SRR4302543.4488876/94‑1 (MQ=60)

                                                        TGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT                                       <  SRR4302543.7661149/94‑1 (MQ=60)

                                                        TGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT                                       <  SRR4302543.7757665/94‑1 (MQ=60)

                                                        TGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT                                       >  SRR4302543.625717/1‑94 (MQ=60)

                                                        TGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT                                       <  SRR4302543.6922548/94‑1 (MQ=60)

                                                        TGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT                                       <  SRR4302543.7571995/94‑1 (MQ=60)

                                                        TGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT                                       <  SRR4302543.4602175/94‑1 (MQ=60)

                                                        AGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT                                       <  SRR4302543.7757666/94‑1 (MQ=60)

                                                         GCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTG                                      <  SRR4302543.3699642/94‑1 (MQ=60)

                                                         GCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTG                                      <  SRR4302543.724139/94‑1 (MQ=60)

                                                          CCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGC                                     <  SRR4302543.5128789/94‑1 (MQ=60)

                                                           CGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCA                                    <  SRR4302543.3409935/94‑1 (MQ=60)

                                                           CGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCA                                    >  SRR4302543.2109354/1‑94 (MQ=60)

                                                            GCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAT                                   <  SRR4302543.1036411/94‑1 (MQ=60)

                                                            GCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAT                                   <  SRR4302543.773250/94‑1 (MQ=60)

                                                            GCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAT                                   <  SRR4302543.4550019/94‑1 (MQ=60)

                                                            GCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAT                                   <  SRR4302543.809343/94‑1 (MQ=60)

                                                             CCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATT                                  <  SRR4302543.7440844/94‑1 (MQ=60)

                                                              CGCCGCGAGATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTT                                 <  SRR4302543.6980319/94‑1 (MQ=60)

                                                              CGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTT                                 <  SRR4302543.264794/94‑1 (MQ=60)

                                                               GCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTA                                >  SRR4302543.761496/1‑94 (MQ=60)

                                                                CCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTAC                               <  SRR4302543.1654156/94‑1 (MQ=60)

                                                                 CGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACT                              >  SRR4302543.4321045/1‑94 (MQ=60)

                                                                 CGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACT                              >  SRR4302543.6856110/1‑94 (MQ=60)

                                                                 CGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACT                              <  SRR4302543.1318186/94‑1 (MQ=60)

                                                                  ctctCATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTG                             <  SRR4302543.2699859/90‑1 (MQ=60)

                                                                  GCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTG                             >  SRR4302543.3082354/1‑94 (MQ=60)

                                                                  GCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTG                             <  SRR4302543.6582738/94‑1 (MQ=60)

                                                                   CGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGA                            >  SRR4302543.760478/1‑94 (MQ=60)

                                                                   CGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGA                            <  SRR4302543.7490926/94‑1 (MQ=60)

                                                                    GACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAA                           >  SRR4302543.1259916/1‑94 (MQ=60)

                                                                    GACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAA                           <  SRR4302543.2581370/94‑1 (MQ=60)

                                                                     ACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAA                          >  SRR4302543.7848875/1‑94 (MQ=60)

                                                                     ACATTCAATCGTGTTGATGTTCGGTGCCCGTCGCTGTCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTTCTGAAA                          >  SRR4302543.3859758/1‑94 (MQ=60)

                                                                      CATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAA                         >  SRR4302543.6950738/1‑94 (MQ=60)

                                                                      CATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAA                         >  SRR4302543.4613559/1‑94 (MQ=60)

                                                                       ATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAA                        <  SRR4302543.7847112/94‑1 (MQ=60)

                                                                       ATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAA                        >  SRR4302543.2418157/1‑94 (MQ=60)

                                                                        TTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAG                       <  SRR4302543.3273585/94‑1 (MQ=60)

                                                                         TCAATCGTGTTTATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGG                      <  SRR4302543.7562159/94‑1 (MQ=60)

                                                                         TCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGG                      >  SRR4302543.3778851/1‑94 (MQ=60)

                                                                         TCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGG                      <  SRR4302543.6044184/94‑1 (MQ=60)

                                                                         TCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGG                      <  SRR4302543.4574151/94‑1 (MQ=60)

                                                                          CAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGATTATCAGCGAACTGAGTGCATTTACTGAAAAAGGC                     <  SRR4302543.7067540/94‑1 (MQ=60)

                                                                          CAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGC                     <  SRR4302543.3647714/94‑1 (MQ=60)

                                                                            ATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCAT                   <  SRR4302543.4462023/94‑1 (MQ=60)

                                                                            ATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCAT                   <  SRR4302543.617685/94‑1 (MQ=60)

                                                                             TCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATT                  <  SRR4302543.948937/94‑1 (MQ=60)

                                                                             TCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACAGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATT                  <  SRR4302543.3977153/94‑1 (MQ=60)

                                                                              CGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTC                 <  SRR4302543.1490657/94‑1 (MQ=60)

                                                                               GTGTTGATGTTCGTTGCCCGTCTGTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCT                >  SRR4302543.1383179/1‑94 (MQ=60)

                                                                               GTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGCCCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCT                <  SRR4302543.5024128/94‑1 (MQ=60)

                                                                               GTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCT                <  SRR4302543.6382403/94‑1 (MQ=60)

                                                                               GTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCT                >  SRR4302543.2222411/1‑94 (MQ=60)

                                                                               GTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCT                <  SRR4302543.4337218/94‑1 (MQ=60)

                                                                               GTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCT                <  SRR4302543.2653764/94‑1 (MQ=60)

                                                                               GTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCT                <  SRR4302543.266233/94‑1 (MQ=60)

                                                                                TGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTG               <  SRR4302543.1418560/94‑1 (MQ=60)

                                                                                TGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTG               >  SRR4302543.4075736/1‑94 (MQ=60)

                                                                                TGTTGATGTTCGTTGCCCGTCGCGGGCGCTGACCGCCAACAGCAGCACGGAGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTG               >  SRR4302543.4052638/1‑94 (MQ=60)

                                                                                   TGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGATTGCATTTACTGAAAAAGGCATTCTGGAA            <  SRR4302543.789976/94‑1 (MQ=60)

                                                                                   TGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTTAAAAAGGCATTCTGGAA            >  SRR4302543.7085195/1‑94 (MQ=60)

                                                                                   TGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAA            <  SRR4302543.5951191/94‑1 (MQ=60)

                                                                                   TGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAA            <  SRR4302543.1644379/94‑1 (MQ=60)

                                                                                   TGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAA            <  SRR4302543.555948/94‑1 (MQ=60)

                                                                                    GATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAG           <  SRR4302543.6474831/94‑1 (MQ=60)

                                                                                    GATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAG           <  SRR4302543.7491151/94‑1 (MQ=60)

                                                                                    GATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAG           >  SRR4302543.7202468/1‑94 (MQ=60)

                                                                                     ATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGC          >  SRR4302543.2733486/1‑94 (MQ=60)

                                                                                     ATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGC          >  SRR4302543.1208033/1‑94 (MQ=60)

                                                                                     ATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGC          <  SRR4302543.4224755/94‑1 (MQ=60)

                                                                                      TGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCC         <  SRR4302543.5228448/94‑1 (MQ=60)

                                                                                      TGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTCAAAAAGGCATTCTGGAAGAC         >  SRR4302543.687548/1‑94 (MQ=60)

                                                                                       GTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCA        >  SRR4302543.2127011/1‑94 (MQ=60)

                                                                                       GTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCA        <  SRR4302543.6974001/94‑1 (MQ=60)

                                                                                        TTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAC       >  SRR4302543.3118790/1‑94 (MQ=60)

                                                                                        TTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAC       <  SRR4302543.938049/94‑1 (MQ=60)

                                                                                        TTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAC       <  SRR4302543.2108917/94‑1 (MQ=60)

                                                                                         TCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACC      <  SRR4302543.5198736/94‑1 (MQ=60)

                                                                                         TCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACC      >  SRR4302543.7769248/1‑94 (MQ=60)

                                                                                          CGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCG     >  SRR4302543.1743296/1‑94 (MQ=60)

                                                                                          CGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCG     >  SRR4302543.7272445/1‑94 (MQ=60)

                                                                                          CGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCG     <  SRR4302543.2963277/94‑1 (MQ=60)

                                                                                           GTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGC    >  SRR4302543.1288799/1‑94 (MQ=60)

                                                                                           GTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGC    >  SRR4302543.1288798/1‑94 (MQ=60)

                                                                                           GTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGC    >  SRR4302543.2901478/1‑94 (MQ=60)

                                                                                           GTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGC    >  SRR4302543.1119577/1‑94 (MQ=60)

                                                                                            TTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCC   <  SRR4302543.6697184/94‑1 (MQ=60)

                                                                                             TGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCA  <  SRR4302543.5753048/94‑1 (MQ=60)

CTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCA  >  NC_000913/3829326‑3829512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`