Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,838,693 A→G I280T (ATC→ACC)  yicM ← putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,838,6930AG99.6% 1380.1 / ‑4.2 440I280T (ATC→ACC) yicMputative transport protein
Reads supporting (aligned to +/- strand):  ref base A (2/0);  new base G (186/252);  total (188/252)
Fisher's exact test for biased strand distribution p-value = 1.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.39e-01

Only 100 of 451 total aligned reads displayed.

GTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAGGC  >  NC_000913/3838603‑3838782
                                                                                          |                                                                                         
gTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTg                                                                                         >  2:1472385/1‑93 (MQ=255)
 ttAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTgg                                                                                        >  1:4890072/1‑93 (MQ=255)
    aGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGa                                                                                     <  1:525396/93‑1 (MQ=255)
     gCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGat                                                                                    >  2:6140421/1‑93 (MQ=255)
       cATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGatca                                                                                  <  2:2022599/93‑1 (MQ=255)
         tCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGatcatc                                                                                >  1:3319361/1‑93 (MQ=255)
           cACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATccc                                                                              <  1:4047855/93‑1 (MQ=255)
            aCGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCt                                                                             <  1:4672083/93‑1 (MQ=255)
             cGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTg                                                                            <  1:2676557/93‑1 (MQ=255)
               ccGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGcc                                                                          >  2:6906374/1‑93 (MQ=255)
                cGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCa                                                                         >  1:2104799/1‑93 (MQ=255)
                 gAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCAt                                                                        >  1:4330030/1‑93 (MQ=255)
                  aaTCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATc                                                                       <  2:5982678/93‑1 (MQ=255)
                    tCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATcac                                                                     >  2:3917191/1‑93 (MQ=255)
                    tCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATcac                                                                     >  2:5822114/1‑93 (MQ=255)
                      ccGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCacac                                                                   >  1:4757291/1‑93 (MQ=255)
                       cGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACAcc                                                                  <  1:3670588/93‑1 (MQ=255)
                       cGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCAACACAcc                                                                  <  2:4168774/93‑1 (MQ=255)
                        gCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACAccc                                                                 <  2:2766379/93‑1 (MQ=255)
                        gCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACAccc                                                                 >  2:3440673/1‑93 (MQ=255)
                         ccAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCg                                                                <  2:553868/93‑1 (MQ=255)
                          cAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCgg                                                               >  1:7439342/1‑93 (MQ=255)
                           aGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGa                                                              <  2:7378802/93‑1 (MQ=255)
                           aGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGa                                                              <  1:3822206/93‑1 (MQ=255)
                           aGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGa                                                              <  1:2015466/93‑1 (MQ=255)
                            ggTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGAc                                                             >  2:3223438/1‑93 (MQ=255)
                              ttCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGt                                                           >  2:2545021/1‑93 (MQ=255)
                              ttCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGt                                                           >  2:7248869/1‑93 (MQ=255)
                               tCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGtt                                                          <  1:4953968/93‑1 (MQ=255)
                               tCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGtt                                                          <  1:5414477/93‑1 (MQ=255)
                                cATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTg                                                         >  2:671566/1‑93 (MQ=255)
                                  tataCACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCNNCCATCACACCCGGACGTTNta                                                       >  1:1035071/1‑93 (MQ=255)
                                    taCACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGtaat                                                     >  1:7849820/1‑93 (MQ=255)
                                     acacCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGtaata                                                    <  1:6838629/93‑1 (MQ=255)
                                     acacCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGtaata                                                    <  1:4113722/93‑1 (MQ=255)
                                      cacCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGtaataa                                                   <  1:6418092/93‑1 (MQ=255)
                                      cacCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGtaataa                                                   <  1:2737974/93‑1 (MQ=255)
                                      cacCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGtaataa                                                   <  2:5671732/93‑1 (MQ=255)
                                        ccGGGCTAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGc                                                 <  2:3702744/93‑1 (MQ=255)
                                          gggCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCgg                                               <  1:1358976/93‑1 (MQ=255)
                                             cGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGaaa                                            <  1:1773882/93‑1 (MQ=255)
                                              gAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAg                                           >  1:1955086/1‑93 (MQ=255)
                                              gAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAg                                           >  1:618923/1‑93 (MQ=255)
                                              gAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAg                                           <  1:3084254/93‑1 (MQ=255)
                                               aaTATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGt                                          <  1:5495337/93‑1 (MQ=255)
                                               aaTATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGt                                          >  2:1101300/1‑93 (MQ=255)
                                                 tataCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAt                                        >  1:604618/1‑93 (MQ=255)
                                                  ataCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAtt                                       <  1:3458728/93‑1 (MQ=255)
                                                  ataCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAtt                                       <  2:6068361/93‑1 (MQ=255)
                                                   taCGTGAAGAAAGCATACTGCCCGGCGAAAGACATGAAGATGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAttt                                      >  2:7823812/1‑93 (MQ=255)
                                                   taCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAttt                                      >  1:7352432/1‑93 (MQ=255)
                                                   taCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAttt                                      <  1:2486244/93‑1 (MQ=255)
                                                   taCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAttt                                      <  1:1637495/93‑1 (MQ=255)
                                                   taCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAttt                                      <  2:3172849/93‑1 (MQ=255)
                                                   taCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGGGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAttt                                      <  2:649820/93‑1 (MQ=255)
                                                    aCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAtttt                                     <  1:3538779/93‑1 (MQ=255)
                                                    aCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAtttt                                     <  2:5426324/93‑1 (MQ=255)
                                                    aCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAtttt                                     <  2:4440434/93‑1 (MQ=255)
                                                     cGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTg                                    <  1:5079545/93‑1 (MQ=255)
                                                      gTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGt                                   <  2:5179581/93‑1 (MQ=255)
                                                      gTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGt                                   <  1:7534711/93‑1 (MQ=255)
                                                      gTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGt                                   <  2:2403322/93‑1 (MQ=255)
                                                       tGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGtt                                  <  2:6557991/93‑1 (MQ=255)
                                                       tGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGtt                                  >  2:3345790/1‑93 (MQ=255)
                                                       tGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGtt                                  >  1:1175930/1‑93 (MQ=255)
                                                       tGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGtt                                  <  2:286607/93‑1 (MQ=255)
                                                       tGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGtt                                  >  2:16703/1‑93 (MQ=255)
                                                       ggaagaaAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGtt                                  <  1:2261041/92‑1 (MQ=255)
                                                        gaagaaAGCAAACTGCCAGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGttt                                 <  1:7041872/93‑1 (MQ=255)
                                                          agaaAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCt                               <  1:5808943/93‑1 (MQ=255)
                                                           gaaAGCAAACTGCCCGGCGAAAGACATGAAGGTAGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTg                              <  2:6357203/93‑1 (MQ=255)
                                                            aaaGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGa                             <  1:375245/93‑1 (MQ=255)
                                                            aaaGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGa                             <  2:1812118/93‑1 (MQ=255)
                                                            aaaGCAAACCGCCCGGCGAAAGACATGAAGGTGGCGGTTATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGa                             <  2:261820/93‑1 (MQ=255)
                                                             aaGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGAt                            <  2:4618223/93‑1 (MQ=255)
                                                               acAAACTGCCCGGCGAAAGACATGAAGGTGGCCATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGc                          <  1:1878394/92‑1 (MQ=255)
                                                                 aaaCTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGa                        <  2:6265031/93‑1 (MQ=255)
                                                                 aaaCTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGa                        <  1:7148354/93‑1 (MQ=255)
                                                                  aaCTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAg                       <  2:3093223/93‑1 (MQ=255)
                                                                  aaCTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAg                       <  2:6992585/93‑1 (MQ=255)
                                                                   aCTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAgg                      <  2:1915441/93‑1 (MQ=255)
                                                                    cTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAggg                     <  2:2235814/93‑1 (MQ=255)
                                                                     tGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGt                    <  1:84865/93‑1 (MQ=255)
                                                                     tGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGt                    >  2:3661394/1‑93 (MQ=255)
                                                                       cccGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTc                  >  2:4295274/1‑93 (MQ=255)
                                                                        cgggCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCg                 <  1:4569514/91‑1 (MQ=255)
                                                                        ccGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCg                 >  2:5277960/1‑93 (MQ=255)
                                                                        ccGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCg                 <  2:1301683/93‑1 (MQ=255)
                                                                         cGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGc                <  2:4145286/93‑1 (MQ=255)
                                                                          ggCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGcc               <  1:5853643/93‑1 (MQ=255)
                                                                          ggCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGcc               <  2:6854443/93‑1 (MQ=255)
                                                                           gCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCt              >  1:7703053/1‑93 (MQ=255)
                                                                           gCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCt              <  2:7682320/93‑1 (MQ=255)
                                                                           gCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCt              <  1:2876082/93‑1 (MQ=255)
                                                                              aaaGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGc           <  2:4039661/93‑1 (MQ=255)
                                                                               aaGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCa          <  1:1457750/93‑1 (MQ=255)
                                                                               aaGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCa          >  2:4970100/1‑93 (MQ=255)
                                                                                   cATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGa      <  1:6562415/93‑1 (MQ=255)
                                                                                    aTGAAGGTGGCGATCATCCCTGCCATCTCACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCCGGCAGTGaa     <  2:2939383/93‑1 (MQ=255)
                                                                                       aaGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAGGc  <  2:3580601/93‑1 (MQ=255)
                                                                                          |                                                                                         
GTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAGGC  >  NC_000913/3838603‑3838782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 240 total aligned reads displayed.
AGCGTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAGGCAATG  >  NC_000913/3838600‑3838786
                                                                                             |                                                                                             
AGCGTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGG                                                                                               >  SRR4302543.4341389/1‑94 (MQ=60)
AGCGTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGG                                                                                               >  SRR4302543.5726227/1‑94 (MQ=60)
 GCGTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGT                                                                                              <  SRR4302543.6075482/94‑1 (MQ=60)
 GCGTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGT                                                                                              <  SRR4302543.5766140/94‑1 (MQ=60)
 GCGTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGT                                                                                              <  SRR4302543.2381327/94‑1 (MQ=60)
 GCGTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGT                                                                                              <  SRR4302543.2381328/94‑1 (MQ=60)
  CGTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTG                                                                                             <  SRR4302543.7817879/94‑1 (MQ=60)
   GTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGG                                                                                            <  SRR4302543.4678988/94‑1 (MQ=60)
   GTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGG                                                                                            >  SRR4302543.2686851/1‑94 (MQ=60)
   GTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGG                                                                                            >  SRR4302543.4934651/1‑94 (MQ=60)
   CTTAACCCATCCACGCCGAAACCCGCCAGGTTCATATCCACCGGGCGAATATACGTGAAGAAAGCAAGCTGCCCGGCGAAAGACATGAAGGTGG                                                                                            <  SRR4302543.2859588/94‑1 (MQ=60)
     TAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCG                                                                                          <  SRR4302543.4842783/94‑1 (MQ=60)
      AAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGA                                                                                         >  SRR4302543.3733625/1‑94 (MQ=60)
      AAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGA                                                                                         >  SRR4302543.7844356/1‑94 (MQ=60)
       AGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGAT                                                                                        <  SRR4302543.6783188/94‑1 (MQ=60)
       AGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGAT                                                                                        <  SRR4302543.530253/94‑1 (MQ=60)
        GCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATC                                                                                       >  SRR4302543.2219031/1‑94 (MQ=60)
         CCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCA                                                                                      <  SRR4302543.836723/94‑1 (MQ=60)
         CCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCA                                                                                      >  SRR4302543.3560147/1‑94 (MQ=60)
          CATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCAT                                                                                     <  SRR4302543.1174262/94‑1 (MQ=60)
           ATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATC                                                                                    >  SRR4302543.385154/1‑94 (MQ=60)
           ATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATC                                                                                    >  SRR4302543.2616023/1‑94 (MQ=60)
           ATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATC                                                                                    >  SRR4302543.5466905/1‑94 (MQ=60)
           ATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATC                                                                                    >  SRR4302543.3349317/1‑94 (MQ=60)
             CCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCC                                                                                  <  SRR4302543.3412060/94‑1 (MQ=60)
             CCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGCGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCCTCCC                                                                                  >  SRR4302543.1522524/1‑94 (MQ=60)
              CACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCT                                                                                 <  SRR4302543.4000810/94‑1 (MQ=60)
              CACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCT                                                                                 <  SRR4302543.2082338/94‑1 (MQ=60)
              CACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCT                                                                                 >  SRR4302543.2007232/1‑94 (MQ=60)
              CACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCT                                                                                 <  SRR4302543.4084077/94‑1 (MQ=60)
              CACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCT                                                                                 >  SRR4302543.3700178/1‑94 (MQ=60)
               ACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTG                                                                                <  SRR4302543.4714672/94‑1 (MQ=60)
                CGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGC                                                                               <  SRR4302543.2700824/94‑1 (MQ=60)
                CGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGC                                                                               >  SRR4302543.7875603/1‑94 (MQ=60)
                  CCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCA                                                                             >  SRR4302543.2123630/1‑94 (MQ=60)
                   CGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCAT                                                                            >  SRR4302543.4369322/1‑94 (MQ=60)
                   CGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCAT                                                                            >  SRR4302543.1394854/1‑94 (MQ=60)
                    GAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATC                                                                           >  SRR4302543.5055/1‑94 (MQ=60)
                    GAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATC                                                                           <  SRR4302543.824988/94‑1 (MQ=60)
                      ATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCAC                                                                         >  SRR4302543.1865613/1‑94 (MQ=60)
                       TCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACA                                                                        <  SRR4302543.3873217/94‑1 (MQ=60)
                       TCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACA                                                                        <  SRR4302543.7991851/94‑1 (MQ=60)
                        CCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACAC                                                                       >  SRR4302543.4800764/1‑94 (MQ=60)
                        CCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACAC                                                                       >  SRR4302543.2490178/1‑94 (MQ=60)
                        CCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACAC                                                                       >  SRR4302543.5317934/1‑94 (MQ=60)
                         CCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACC                                                                      >  SRR4302543.3859383/1‑94 (MQ=60)
                         CCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACC                                                                      <  SRR4302543.2697776/94‑1 (MQ=60)
                          CGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCC                                                                     <  SRR4302543.3702815/94‑1 (MQ=60)
                          CGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCC                                                                     <  SRR4302543.6373930/94‑1 (MQ=60)
                           GCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCG                                                                    <  SRR4302543.1583620/94‑1 (MQ=60)
                            CCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGG                                                                   >  SRR4302543.5296177/1‑94 (MQ=60)
                            CCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGG                                                                   >  SRR4302543.7510646/1‑94 (MQ=60)
                            CCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGG                                                                   >  SRR4302543.6109712/1‑94 (MQ=60)
                            CCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGGGGCGATCATCTCTGCCATCACACCCGG                                                                   >  SRR4302543.4755544/1‑94 (MQ=60)
                             CAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGC                                                                  >  SRR4302543.2098942/1‑94 (MQ=60)
                              AGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGAC                                                                 <  SRR4302543.4364620/94‑1 (MQ=60)
                              AGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGAC                                                                 <  SRR4302543.6089687/94‑1 (MQ=60)
                              AGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGAC                                                                 >  SRR4302543.1156379/1‑94 (MQ=60)
                              AGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGAC                                                                 <  SRR4302543.7633842/94‑1 (MQ=60)
                              AGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGAC                                                                 <  SRR4302543.2033580/94‑1 (MQ=60)
                              AGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGAC                                                                 <  SRR4302543.1480170/94‑1 (MQ=60)
                                 TTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTT                                                              <  SRR4302543.4485116/94‑1 (MQ=60)
                                  TCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTG                                                             <  SRR4302543.5463737/94‑1 (MQ=60)
                                  TCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTG                                                             >  SRR4302543.696147/1‑94 (MQ=60)
                                   CATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGT                                                            <  SRR4302543.5832111/94‑1 (MQ=60)
                                    ATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTA                                                           <  SRR4302543.3533186/94‑1 (MQ=60)
                                    ATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCNNCCATCACACCCGGACGTTNTA                                                           >  SRR4302543.1044263/1‑94 (MQ=60)
                                      ATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAAT                                                         <  SRR4302543.2702451/94‑1 (MQ=60)
                                      ATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAAT                                                         <  SRR4302543.1273562/94‑1 (MQ=60)
                                      ATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAAT                                                         >  SRR4302543.7923791/1‑94 (MQ=60)
                                       TACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATA                                                        <  SRR4302543.1691248/94‑1 (MQ=60)
                                        ACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAA                                                       <  SRR4302543.4150771/94‑1 (MQ=60)
                                        ACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAA                                                       <  SRR4302543.6903177/94‑1 (MQ=60)
                                         CACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAG                                                      <  SRR4302543.5413963/94‑1 (MQ=60)
                                         CACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAG                                                      <  SRR4302543.4121712/94‑1 (MQ=60)
                                         CACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAG                                                      <  SRR4302543.2762884/94‑1 (MQ=60)
                                         CACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAG                                                      <  SRR4302543.508454/94‑1 (MQ=60)
                                         CACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAG                                                      <  SRR4302543.6478546/94‑1 (MQ=60)
                                         CACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTCTAATAAG                                                      >  SRR4302543.3762681/1‑94 (MQ=60)
                                           CCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCG                                                    <  SRR4302543.1279359/94‑1 (MQ=60)
                                            CGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGG                                                   >  SRR4302543.523827/1‑94 (MQ=60)
                                            CGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGG                                                   <  SRR4302543.6752007/94‑1 (MQ=60)
                                             GGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGA                                                  <  SRR4302543.1371143/94‑1 (MQ=60)
                                             GGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGA                                                  >  SRR4302543.1998411/1‑94 (MQ=60)
                                                CGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACGCCCGGACGTTGTAATAAGCGGAAAG                                               <  SRR4302543.1934297/94‑1 (MQ=60)
                                                CGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAG                                               <  SRR4302543.1789737/94‑1 (MQ=60)
                                                CGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAG                                               >  SRR4302543.1972620/1‑94 (MQ=60)
                                                CGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAG                                               >  SRR4302543.624586/1‑94 (MQ=60)
                                                CGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAG                                               >  SRR4302543.1862969/1‑94 (MQ=60)
                                                 GAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGT                                              >  SRR4302543.5100705/1‑94 (MQ=60)
                                                 GAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGA                                              >  SRR4302543.4165262/1‑94 (MQ=60)
                                                  AATATACGTGAAGAAAGCAAACTGCGCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTA                                             <  SRR4302543.5545180/94‑1 (MQ=60)
                                                  AATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTA                                             >  SRR4302543.5988296/1‑94 (MQ=60)
                                                  AATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGCTGTAATAAGCGGAAAGTA                                             >  SRR4302543.3852318/1‑94 (MQ=60)
                                                   ATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAT                                            <  SRR4302543.3048004/94‑1 (MQ=60)
                                                    TATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATT                                           <  SRR4302543.7310005/94‑1 (MQ=60)
                                                    TATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATT                                           >  SRR4302543.1295727/1‑94 (MQ=60)
                                                     ATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTT                                          <  SRR4302543.3489713/94‑1 (MQ=60)
                                                     ATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTT                                          <  SRR4302543.242431/94‑1 (MQ=60)
                                                     ATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTT                                          <  SRR4302543.4673573/94‑1 (MQ=60)
                                                     ATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTT                                          >  SRR4302543.7423159/1‑94 (MQ=60)
                                                     ATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGCCGATCATCCCTGCCATCACACCCGCACGTTGTACTAAGAGGTAAGTATTT                                          >  SRR4302543.3974964/1‑94 (MQ=60)
                                                      TACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTT                                         <  SRR4302543.7713825/94‑1 (MQ=60)
                                                      TACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTT                                         <  SRR4302543.2508763/94‑1 (MQ=60)
                                                      TACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTT                                         <  SRR4302543.1652105/94‑1 (MQ=60)
                                                      TACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTT                                         >  SRR4302543.4936586/1‑94 (MQ=60)
                                                       ACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTG                                        <  SRR4302543.6292309/94‑1 (MQ=60)
                                                       ACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTG                                        <  SRR4302543.3197806/94‑1 (MQ=60)
                                                       ACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTG                                        <  SRR4302543.5102130/94‑1 (MQ=60)
                                                       ACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTG                                        <  SRR4302543.1674252/94‑1 (MQ=60)
                                                       ACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTG                                        <  SRR4302543.3466979/94‑1 (MQ=60)
                                                       ACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTG                                        <  SRR4302543.3570242/94‑1 (MQ=60)
                                                       ACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTG                                        <  SRR4302543.2879473/94‑1 (MQ=60)
                                                       ACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTG                                        <  SRR4302543.41410/94‑1 (MQ=60)
                                                        CGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGT                                       <  SRR4302543.5125622/94‑1 (MQ=60)
                                                        CGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGCACGTTGTAATAGGCGGAAAGTATTTTGT                                       >  SRR4302543.56524/1‑94 (MQ=60)
                                                         GTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTT                                      >  SRR4302543.1186579/1‑94 (MQ=60)
                                                         GTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTT                                      >  SRR4302543.6670597/1‑94 (MQ=60)
                                                         GTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTT                                      <  SRR4302543.7606554/94‑1 (MQ=60)
                                                          TGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTT                                     >  SRR4302543.38022/1‑94 (MQ=60)
                                                          GGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTT                                     <  SRR4302543.2281657/94‑1 (MQ=60)
                                                           GAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTC                                    <  SRR4302543.7731813/94‑1 (MQ=60)
                                                           GAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTC                                    <  SRR4302543.5579581/94‑1 (MQ=60)
                                                           GAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTC                                    >  SRR4302543.323169/1‑94 (MQ=60)
                                                           GAAGAAAGCAAACTGCCAGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTC                                    <  SRR4302543.7109908/94‑1 (MQ=60)
                                                            ctGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCT                                   <  SRR4302543.4190285/92‑1 (MQ=60)
                                                            AAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCT                                   <  SRR4302543.589659/94‑1 (MQ=60)
                                                            AAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCT                                   <  SRR4302543.2972332/94‑1 (MQ=60)
                                                            AAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCT                                   >  SRR4302543.7216345/1‑94 (MQ=60)
                                                            AAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCT                                   >  SRR4302543.7368912/1‑94 (MQ=60)
                                                            AAGAAAGCAAACTGCACGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCT                                   <  SRR4302543.2772358/94‑1 (MQ=60)
                                                             AGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTG                                  >  SRR4302543.7751741/1‑94 (MQ=60)
                                                             AGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTG                                  <  SRR4302543.5861772/94‑1 (MQ=60)
                                                               AAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGAT                                >  SRR4302543.7522568/1‑94 (MQ=60)
                                                               AAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGAT                                <  SRR4302543.3392457/94‑1 (MQ=60)
                                                               AAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGAT                                <  SRR4302543.6547831/94‑1 (MQ=60)
                                                               AAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGAT                                <  SRR4302543.378698/94‑1 (MQ=60)
                                                               AAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGAT                                <  SRR4302543.218592/94‑1 (MQ=60)
                                                               AAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGAT                                <  SRR4302543.4588594/94‑1 (MQ=60)
                                                               AAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGAT                                >  SRR4302543.7306496/1‑94 (MQ=60)
                                                               AAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGAT                                <  SRR4302543.5507842/94‑1 (MQ=60)
                                                                AAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATG                               >  SRR4302543.1964578/1‑94 (MQ=60)
                                                                 AGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGC                              >  SRR4302543.2169459/1‑94 (MQ=60)
                                                                 AGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGC                              <  SRR4302543.4686625/94‑1 (MQ=60)
                                                                 AGCAAACTGCCCGGCGAAAGACATGAAGGGGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGC                              <  SRR4302543.7521674/94‑1 (MQ=60)
                                                                  GCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCG                             >  SRR4302543.7495393/1‑94 (MQ=60)
                                                                  GCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCG                             <  SRR4302543.3738714/94‑1 (MQ=60)
                                                                  GCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCG                             >  SRR4302543.5899382/1‑94 (MQ=60)
                                                                  GCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCG                             <  SRR4302543.7825874/94‑1 (MQ=60)
                                                                  ACAAACTGCCCGGCGAAAGACATGAAGGTGGCCATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCG                             <  SRR4302543.1895271/94‑1 (MQ=60)
                                                                   CAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGA                            >  SRR4302543.7433083/1‑94 (MQ=60)
                                                                   CAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGA                            >  SRR4302543.6938741/1‑94 (MQ=60)
                                                                    AAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAG                           <  SRR4302543.711066/94‑1 (MQ=60)
                                                                    AAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAG                           <  SRR4302543.6411747/94‑1 (MQ=60)
                                                                    AAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAG                           <  SRR4302543.856558/94‑1 (MQ=60)
                                                                    AAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAG                           <  SRR4302543.6158393/94‑1 (MQ=60)
                                                                    AAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGCAAAGGATTTTGTTTCGGATGCGAG                           >  SRR4302543.1163480/1‑94 (MQ=60)
                                                                       CTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGT                        <  SRR4302543.6548578/94‑1 (MQ=60)
                                                                        TGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTT                       >  SRR4302543.2745675/1‑94 (MQ=60)
                                                                        TGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTT                       <  SRR4302543.7500728/94‑1 (MQ=60)
                                                                        TGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTT                       <  SRR4302543.85648/94‑1 (MQ=60)
                                                                         GCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGAGGTTGGACTAAGCGGACAGTAGTTTATTTCTCATGTGAGGGTcg                      >  SRR4302543.3182285/1‑92 (MQ=49)
                                                                         GCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTC                      >  SRR4302543.3182286/1‑94 (MQ=60)
                                                                         GCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTC                      <  SRR4302543.4974279/94‑1 (MQ=60)
                                                                         GCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTC                      <  SRR4302543.7180019/94‑1 (MQ=60)
                                                                           CGGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGC                    <  SRR4302543.4611070/94‑1 (MQ=60)
                                                                            CGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCC                   <  SRR4302543.623166/94‑1 (MQ=60)
                                                                              GCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTG                 <  SRR4302543.2902258/94‑1 (MQ=60)
                                                                              GCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTG                 <  SRR4302543.2902259/94‑1 (MQ=60)
                                                                              GCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTG                 <  SRR4302543.1452591/94‑1 (MQ=60)
                                                                               GGAAAGACATGAAGGTGGCGATCATCCCTGCCATCCCCCCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGG                <  SRR4302543.1875326/94‑1 (MQ=60)
                                                                               CGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGG                >  SRR4302543.4753095/1‑94 (MQ=60)
                                                                               CGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGG                >  SRR4302543.1655318/1‑94 (MQ=60)
                                                                                GAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGC               >  SRR4302543.2014459/1‑94 (MQ=60)
                                                                                GAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGC               >  SRR4302543.4992357/1‑94 (MQ=60)
                                                                                GAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGC               >  SRR4302543.3752869/1‑94 (MQ=60)
                                                                                GAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGC               >  SRR4302543.3500145/1‑94 (MQ=60)
                                                                                 AAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCA              >  SRR4302543.7046361/1‑94 (MQ=60)
                                                                                 AAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCA              <  SRR4302543.6877253/94‑1 (MQ=60)
                                                                                  AAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAG             <  SRR4302543.1470904/94‑1 (MQ=60)
                                                                                    GACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTG           >  SRR4302543.4343159/1‑94 (MQ=60)
                                                                                    GACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTG           >  SRR4302543.5731585/1‑94 (MQ=60)
                                                                                     ACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGA          >  SRR4302543.4632137/1‑94 (MQ=60)
                                                                                      CATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAA         >  SRR4302543.7148944/1‑94 (MQ=60)
                                                                                      CATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAA         <  SRR4302543.6624161/94‑1 (MQ=60)
                                                                                      CATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAA         <  SRR4302543.5902445/94‑1 (MQ=60)
                                                                                      CATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAA         <  SRR4302543.3152106/94‑1 (MQ=60)
                                                                                       ATGAAGGTGGCGATCATCCCTGCCATCACTCCCGGACGTTGTAATAAGCGGAAAGTAGTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTTAAG        <  SRR4302543.4872698/94‑1 (MQ=60)
                                                                                       ATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAG        >  SRR4302543.544182/1‑94 (MQ=60)
                                                                                       ATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAG        >  SRR4302543.2811350/1‑94 (MQ=60)
                                                                                       ATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAG        <  SRR4302543.6073236/94‑1 (MQ=60)
                                                                                       ATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAG        <  SRR4302543.4882006/94‑1 (MQ=60)
                                                                                       ATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAG        <  SRR4302543.2100929/94‑1 (MQ=60)
                                                                                        TGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAGG       <  SRR4302543.3596776/94‑1 (MQ=60)
                                                                                          AAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAGGCA     <  SRR4302543.5928288/94‑1 (MQ=60)
                                                                                           AGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAGGCAA    <  SRR4302543.6662052/94‑1 (MQ=60)
                                                                                            GGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAGGCAAT   <  SRR4302543.4555692/94‑1 (MQ=60)
                                                                                            GGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAGGCAAT   <  SRR4302543.4555892/94‑1 (MQ=60)
                                                                                            GGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAGGCAAT   <  SRR4302543.471844/94‑1 (MQ=60)
                                                                                             GTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGTGAGGGTTCGCCTGGCAGTGAAGGCAATG  <  SRR4302543.2204983/94‑1 (MQ=60)
                                                                                             |                                                                                             
AGCGTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAGGCAATG  >  NC_000913/3838600‑3838786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑