Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,847,265 A→G W167R (TGG→CGG)  b3668 ← sensor histidine protein kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,847,2650AG99.7% 1190.1 / ‑5.6 384W167R (TGG→CGG) b3668sensor histidine protein kinase
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (156/227);  total (156/228)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01

Only 100 of 417 total aligned reads displayed.

GACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCAGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACG  >  NC_000913/3847175‑3847354
                                                                                          |                                                                                         
gaCTGAGAGCAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCTAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCggg                                                                                         <  1:1577926/93‑1 (MQ=255)
 aCTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCgggg                                                                                        >  2:6909685/1‑92 (MQ=255)
 aCTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGgt                                                                                        <  1:1329452/93‑1 (MQ=255)
 aCTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGgt                                                                                        <  2:4336807/93‑1 (MQ=255)
  cTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGgtg                                                                                       >  2:5954424/1‑93 (MQ=255)
   tGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGgtgt                                                                                      >  1:3275070/1‑93 (MQ=255)
     aTAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTa                                                                                    >  1:6723469/1‑93 (MQ=255)
      tAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTAt                                                                                   <  1:7656370/93‑1 (MQ=255)
       aacaaacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTAtt                                                                                  <  2:2433749/93‑1 (MQ=255)
       aacaaacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTAtt                                                                                  >  2:4265490/1‑93 (MQ=255)
        acaaacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTg                                                                                 <  2:4137536/93‑1 (MQ=255)
        acaaacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTg                                                                                 <  2:5597986/93‑1 (MQ=255)
         caaacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTgg                                                                                >  1:5388941/1‑93 (MQ=255)
            acaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCga                                                                             <  1:7781877/93‑1 (MQ=255)
              agcagcAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCgaga                                                                           <  1:2024942/93‑1 (MQ=255)
               gcagcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGAt                                                                          <  2:6127267/93‑1 (MQ=255)
                cagcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATa                                                                         <  1:402789/93‑1 (MQ=255)
                 agcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAg                                                                        <  2:3126576/93‑1 (MQ=255)
                 agcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAg                                                                        <  2:2916621/93‑1 (MQ=255)
                 agcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAg                                                                        >  1:3498717/1‑93 (MQ=255)
                  gcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAgg                                                                       >  2:2021739/1‑92 (MQ=255)
                  gcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGt                                                                       <  2:7877235/93‑1 (MQ=255)
                  gcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGt                                                                       <  2:4687042/93‑1 (MQ=255)
                  gcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGCGTTAGTGGCGAGATAGt                                                                       >  1:6453869/1‑93 (MQ=255)
                  gcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGGGACGGACCGCGCGGCAGCCGGGGTTTATGGGCGagagagg                                                                       >  1:254663/1‑92 (MQ=255)
                    aaGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGc                                                                     >  2:3672505/1‑93 (MQ=255)
                     aGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGcc                                                                    >  1:4844052/1‑93 (MQ=255)
                      gTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCa                                                                   <  2:184523/93‑1 (MQ=255)
                      gTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCa                                                                   >  1:4379508/1‑93 (MQ=255)
                      gTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCa                                                                   <  1:238212/93‑1 (MQ=255)
                         ccagaccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGaa                                                                <  2:3778649/93‑1 (MQ=255)
                          cagaccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAac                                                               >  1:7719267/1‑93 (MQ=255)
                           agaccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAaca                                                              >  2:5367489/1‑93 (MQ=255)
                             accagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACAcc                                                            >  2:4411757/1‑93 (MQ=255)
                              ccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACCCCa                                                           >  1:3306261/1‑93 (MQ=255)
                              ccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCa                                                           >  1:3029025/1‑93 (MQ=255)
                              ccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCa                                                           <  2:1945970/93‑1 (MQ=255)
                              ccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCa                                                           >  1:867356/1‑93 (MQ=255)
                              ccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCa                                                           >  2:5251105/1‑93 (MQ=255)
                              ccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGAAAGTGCCCGAACACCa                                                           >  2:2352198/1‑93 (MQ=255)
                               cagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAg                                                          >  1:1680953/1‑93 (MQ=255)
                               cagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGACGGGTGTTATTGGCGAGATAGTGCCAGAACACCAg                                                          >  2:4046341/1‑93 (MQ=255)
                                ngaTGTCNCCCGCGCCAGTTGNTTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGa                                                         <  1:6103217/92‑1 (MQ=255)
                                agaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGa                                                         <  1:5120569/93‑1 (MQ=255)
                                 gaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAGCCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGAc                                                        <  1:6014751/93‑1 (MQ=255)
                                 gaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGAc                                                        >  2:3218135/1‑93 (MQ=255)
                                 gaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGAc                                                        >  2:4858036/1‑93 (MQ=255)
                                 gaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGAc                                                        >  1:1424097/1‑93 (MQ=255)
                                 gaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGGGTTATTGGCGAGATAGTGCCAGAACACCAGAc                                                        >  1:7151269/1‑93 (MQ=255)
                                  aTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGAGCCAGAACACCAGACa                                                       >  1:5773285/1‑93 (MQ=255)
                                   tGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACat                                                      <  1:4564611/93‑1 (MQ=255)
                                     tCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGTACACCAGACatat                                                    <  1:5230385/93‑1 (MQ=255)
                                     tCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACatat                                                    >  2:77492/1‑93 (MQ=255)
                                     tCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACatat                                                    >  1:4486173/1‑93 (MQ=255)
                                     tCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACatat                                                    <  2:2668413/93‑1 (MQ=255)
                                      cGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATc                                                   >  1:2221626/1‑93 (MQ=255)
                                      cGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATc                                                   <  2:5701780/93‑1 (MQ=255)
                                         ccGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCggg                                                <  1:3752999/93‑1 (MQ=255)
                                         ccGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGGGTTATTGGCGAGCTAGTGCCAGAACACCAGACATATCggg                                                >  2:6719801/1‑93 (MQ=255)
                                          cgcgCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGCGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCgggg                                               >  1:2860790/1‑93 (MQ=255)
                                           gcgcCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGc                                              <  2:5445118/93‑1 (MQ=255)
                                            cgcCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGcc                                             <  1:4965543/93‑1 (MQ=255)
                                              ccAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAg                                           <  2:703233/93‑1 (MQ=255)
                                                aGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCCGAACACCAGACATATCGGGGTCAGCg                                         >  2:2229828/1‑93 (MQ=255)
                                                aGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCg                                         >  2:2527412/1‑93 (MQ=255)
                                                aGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCg                                         >  1:41245/1‑93 (MQ=255)
                                                 gTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGt                                        >  1:5526817/1‑93 (MQ=255)
                                                 gTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGGGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGt                                        >  2:7664832/1‑93 (MQ=255)
                                                   tGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCa                                      <  2:3948142/93‑1 (MQ=255)
                                                   tGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCa                                      <  2:1430748/93‑1 (MQ=255)
                                                   tGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCa                                      <  1:7832212/93‑1 (MQ=255)
                                                   tGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCa                                      <  2:500772/93‑1 (MQ=255)
                                                    gATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAg                                     <  2:3544963/93‑1 (MQ=255)
                                                      tgggCGGAAAAACGAGGGAGGGCCGGAGCGGCGGCGGGTTTTTATTGGCGAGATAGTGCAAAACCCCAAGACATAGGGGGCCCGGCGTCAGgc                                   <  2:1157557/91‑1 (MQ=255)
                                                         gCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGgccgc                                <  2:631623/93‑1 (MQ=255)
                                                           tGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCa                              <  1:6781004/93‑1 (MQ=255)
                                                           tGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCa                              <  2:7365657/93‑1 (MQ=255)
                                                            gagaAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGAGCCAGAACACCAGACATATCGGGGCCCGCGTCAGGCCGCCAg                             >  2:5138161/1‑93 (MQ=255)
                                                              gaAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGtt                           <  1:2683490/93‑1 (MQ=255)
                                                                aaCCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTaa                         <  1:5867243/93‑1 (MQ=255)
                                                                aaCCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTaa                         >  2:6512261/1‑93 (MQ=255)
                                                                  ccAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAg                       <  1:980099/93‑1 (MQ=255)
                                                                   cAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGt                      >  2:7546390/1‑93 (MQ=255)
                                                                   cAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGt                      <  2:3394838/93‑1 (MQ=255)
                                                                         cGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCaa                <  1:3597146/93‑1 (MQ=255)
                                                                         cGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAATGCCAGAACACCAGACATATCGGGGCCCGCGTCAGGCCGCCAGTTAAAGTCCGCaa                >  2:2756647/1‑93 (MQ=255)
                                                                          ggACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAAc               >  1:1028242/1‑93 (MQ=255)
                                                                          ggACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAAc               <  1:2000097/93‑1 (MQ=255)
                                                                          ggACCGAGCGGCAGCCGGGGGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAAc               <  2:2277317/93‑1 (MQ=255)
                                                                           gACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACa              >  1:1773744/1‑93 (MQ=255)
                                                                           gACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACa              >  1:7324969/1‑93 (MQ=255)
                                                                              cGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAgcg           >  1:6665922/1‑93 (MQ=255)
                                                                              cGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAgcg           >  2:1330781/1‑93 (MQ=255)
                                                                               gAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAgcgc          <  2:7174249/93‑1 (MQ=255)
                                                                                aGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGGTAAAGTCAGCAACAGCGCa         >  2:1699733/1‑93 (MQ=255)
                                                                                    gCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTcc     <  2:1568711/93‑1 (MQ=255)
                                                                                    gCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTcc     >  2:1781030/1‑93 (MQ=255)
                                                                                    gCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTcc     >  1:3159430/1‑93 (MQ=255)
                                                                                     cAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCa    <  1:5633652/93‑1 (MQ=255)
                                                                                      aGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCAc   <  2:5862619/93‑1 (MQ=255)
                                                                                          |                                                                                         
GACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCAGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACG  >  NC_000913/3847175‑3847354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 214 total aligned reads displayed.
AGAGACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCAGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACGACTC  >  NC_000913/3847172‑3847358
                                                                                             |                                                                                             
AGAGACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACGGAGCGGCAGCCG                                                                                               >  SRR4302543.2640237/1‑94 (MQ=60)
AGAGACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCG                                                                                               >  SRR4302543.4740545/1‑94 (MQ=60)
AGAGACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCG                                                                                               >  SRR4302543.5160181/1‑94 (MQ=60)
AGAGACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCG                                                                                               >  SRR4302543.690031/1‑94 (MQ=60)
AGAGACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCG                                                                                               <  SRR4302543.1428531/94‑1 (MQ=60)
 GAGACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGG                                                                                              >  SRR4302543.3672984/1‑94 (MQ=60)
  AGACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGG                                                                                             <  SRR4302543.1857586/94‑1 (MQ=60)
  AGACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGG                                                                                             >  SRR4302543.3335381/1‑94 (MQ=60)
  AGACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGG                                                                                             >  SRR4302543.3335382/1‑94 (MQ=60)
    GCTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTG                                                                                           <  SRR4302543.1576339/94‑1 (MQ=60)
    ACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTG                                                                                           >  SRR4302543.362225/1‑94 (MQ=60)
    ACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTG                                                                                           <  SRR4302543.931663/94‑1 (MQ=60)
    ACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTG                                                                                           <  SRR4302543.6131013/94‑1 (MQ=60)
    ACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTG                                                                                           <  SRR4302543.1341302/94‑1 (MQ=60)
    ACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTG                                                                                           >  SRR4302543.5196364/1‑94 (MQ=60)
     CTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGT                                                                                          >  SRR4302543.3304649/1‑94 (MQ=60)
      TGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTT                                                                                         >  SRR4302543.7297324/1‑94 (MQ=60)
      TGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTT                                                                                         >  SRR4302543.1885470/1‑94 (MQ=60)
       GATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTA                                                                                        >  SRR4302543.1789196/1‑94 (MQ=60)
       GATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTA                                                                                        >  SRR4302543.6787004/1‑94 (MQ=60)
       GATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTA                                                                                        >  SRR4302543.5223613/1‑94 (MQ=60)
       GATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTA                                                                                        >  SRR4302543.4253169/1‑94 (MQ=60)
        ATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTAT                                                                                       <  SRR4302543.5650419/94‑1 (MQ=60)
        ATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTAT                                                                                       <  SRR4302543.3624750/94‑1 (MQ=60)
        ATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTAT                                                                                       <  SRR4302543.7826672/94‑1 (MQ=60)
         TAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATT                                                                                      <  SRR4302543.7728953/94‑1 (MQ=60)
         TAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATT                                                                                      >  SRR4302543.649927/1‑94 (MQ=60)
         GAACAAACATCAGCAAGTACCAGACCATATATCGTCCGCGCCAGGTGATTGGATGAGAAGCCAGTGACGGACCGAGCGGCAGCCAGGGGTTATT                                                                                      <  SRR4302543.4731366/94‑1 (MQ=60)
           ACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGG                                                                                    <  SRR4302543.2899812/94‑1 (MQ=60)
           ACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGG                                                                                    <  SRR4302543.5012468/94‑1 (MQ=60)
           ACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGG                                                                                    >  SRR4302543.5437915/1‑94 (MQ=60)
            CAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGC                                                                                   <  SRR4302543.4911669/94‑1 (MQ=60)
             AAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCG                                                                                  <  SRR4302543.4526928/94‑1 (MQ=60)
               ACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAG                                                                                <  SRR4302543.7855251/94‑1 (MQ=60)
                 AGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGAT                                                                              <  SRR4302543.2043139/94‑1 (MQ=60)
                 AGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGAT                                                                              <  SRR4302543.3713694/94‑1 (MQ=60)
                 AGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGATGAGAAACCAGTGACGGACCGAGCGGCAGCCGAGTGTTATTGGCGAGAT                                                                              <  SRR4302543.2042915/94‑1 (MQ=60)
                  GCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATA                                                                             <  SRR4302543.7585588/94‑1 (MQ=60)
                  GCAGCAAGTACCAGACCAGATGTCACCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATA                                                                             <  SRR4302543.6844341/94‑1 (MQ=60)
                   CAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAG                                                                            <  SRR4302543.2041037/94‑1 (MQ=60)
                   CAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAG                                                                            >  SRR4302543.2394335/1‑94 (MQ=60)
                   CAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAG                                                                            >  SRR4302543.3530014/1‑94 (MQ=60)
                    AGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGT                                                                           <  SRR4302543.3111508/94‑1 (MQ=60)
                    AGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGT                                                                           <  SRR4302543.2817957/94‑1 (MQ=60)
                    AGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGT                                                                           <  SRR4302543.104516/94‑1 (MQ=60)
                    AGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGT                                                                           <  SRR4302543.1716585/94‑1 (MQ=60)
                    AGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGCGTTAGTGGCGAGATAGT                                                                           >  SRR4302543.6514681/1‑94 (MQ=60)
                     GCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTG                                                                          <  SRR4302543.2171460/94‑1 (MQ=60)
                     GCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTG                                                                          <  SRR4302543.1891305/94‑1 (MQ=60)
                      CAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGC                                                                         >  SRR4302543.3799330/1‑94 (MQ=60)
                       AAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCC                                                                        >  SRR4302543.4888221/1‑94 (MQ=60)
                       AAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGGGTTATTGGCGAGATAGTGCC                                                                        >  SRR4302543.1556617/1‑94 (MQ=60)
                        AGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCA                                                                       >  SRR4302543.4419206/1‑94 (MQ=60)
                        AGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCA                                                                       <  SRR4302543.5913885/94‑1 (MQ=60)
                        AGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGGGTTATTGGCGAGATAGTGCCA                                                                       >  SRR4302543.1484070/1‑94 (MQ=60)
                         GTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAG                                                                      <  SRR4302543.240274/94‑1 (MQ=60)
                         GTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAG                                                                      <  SRR4302543.6108128/94‑1 (MQ=60)
                          TACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGA                                                                     <  SRR4302543.2589576/94‑1 (MQ=60)
                          TACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGAGTTATTGGCGAGATAGTGCCAGA                                                                     >  SRR4302543.731487/1‑94 (MQ=60)
                           ACCAGACCAGATGTCGCCAGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAA                                                                    <  SRR4302543.4236669/94‑1 (MQ=60)
                            CCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAAC                                                                   >  SRR4302543.7792265/1‑94 (MQ=60)
                              AGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACAC                                                                 >  SRR4302543.969271/1‑94 (MQ=60)
                              AGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCACAACAC                                                                 >  SRR4302543.4480603/1‑94 (MQ=60)
                               GACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACC                                                                >  SRR4302543.5040434/1‑94 (MQ=60)
                                ACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACCCCA                                                               >  SRR4302543.3336093/1‑94 (MQ=60)
                                ACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCA                                                               <  SRR4302543.5604805/94‑1 (MQ=60)
                                ACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCA                                                               >  SRR4302543.875107/1‑94 (MQ=60)
                                 CCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAG                                                              >  SRR4302543.1696036/1‑94 (MQ=60)
                                 CCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGGGTTATTGGGGAGATAGGGCCAGAACAACAG                                                              >  SRR4302543.3621202/1‑94 (MQ=60)
                                  CAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGA                                                             >  SRR4302543.4752317/1‑94 (MQ=60)
                                  CAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGA                                                             <  SRR4302543.2759923/94‑1 (MQ=60)
                                   NGATGTCNCCCGCGCCAGTTGNTTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGAC                                                            <  SRR4302543.6161044/94‑1 (MQ=60)
                                   AGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGAC                                                            <  SRR4302543.903948/94‑1 (MQ=60)
                                   AGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGAC                                                            >  SRR4302543.1436986/1‑94 (MQ=60)
                                   AGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGAC                                                            <  SRR4302543.5166873/94‑1 (MQ=60)
                                   AGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGAC                                                            >  SRR4302543.717791/1‑94 (MQ=60)
                                   AGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGGGTTATTGGCGAGATAGTGCCAGAACACCAGAC                                                            >  SRR4302543.7220777/1‑94 (MQ=60)
                                    GATGTCGCCCGCGCCAGTTGATTGGCTGAGAAGCCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACA                                                           <  SRR4302543.6070346/94‑1 (MQ=60)
                                    GATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGAGCCAGAACACCAGACA                                                           >  SRR4302543.5825837/1‑94 (MQ=60)
                                     ATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACAT                                                          >  SRR4302543.238838/1‑94 (MQ=60)
                                     ATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACAT                                                          <  SRR4302543.4988050/94‑1 (MQ=60)
                                      TGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATA                                                         >  SRR4302543.4680814/1‑94 (MQ=60)
                                      TGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATA                                                         <  SRR4302543.4606149/94‑1 (MQ=60)
                                      TGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATA                                                         <  SRR4302543.5605643/94‑1 (MQ=60)
                                       GTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATAT                                                        >  SRR4302543.4526925/1‑94 (MQ=60)
                                       GTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATAT                                                        <  SRR4302543.139363/94‑1 (MQ=60)
                                       GTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATAT                                                        <  SRR4302543.792022/94‑1 (MQ=60)
                                       GTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATAT                                                        <  SRR4302543.4121223/94‑1 (MQ=60)
                                       GTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATAT                                                        <  SRR4302543.332181/94‑1 (MQ=60)
                                        TCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGTACACCAGACATATC                                                       <  SRR4302543.5277508/94‑1 (MQ=60)
                                        TCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATC                                                       >  SRR4302543.4958124/1‑94 (MQ=60)
                                        TCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATC                                                       <  SRR4302543.3734175/94‑1 (MQ=60)
                                        TCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATC                                                       <  SRR4302543.431937/94‑1 (MQ=60)
                                        TCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATC                                                       >  SRR4302543.2241675/1‑94 (MQ=60)
                                         CGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCG                                                      <  SRR4302543.2362044/94‑1 (MQ=60)
                                         CGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCG                                                      <  SRR4302543.5868663/94‑1 (MQ=60)
                                           CCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGG                                                    >  SRR4302543.7836214/1‑94 (MQ=60)
                                           CCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGG                                                    <  SRR4302543.6771567/94‑1 (MQ=60)
                                            CCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGG                                                   >  SRR4302543.1198888/1‑94 (MQ=60)
                                            CCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGG                                                   <  SRR4302543.3786021/94‑1 (MQ=60)
                                            CCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGG                                                   >  SRR4302543.7860076/1‑94 (MQ=60)
                                            CCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGG                                                   <  SRR4302543.2451526/94‑1 (MQ=60)
                                            CCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGCGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGG                                                   >  SRR4302543.2886879/1‑94 (MQ=60)
                                             CGCGCCAGTTGATTGGCTGAGAAACCCGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGC                                                  <  SRR4302543.1360642/94‑1 (MQ=60)
                                               CGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCA                                                >  SRR4302543.3980105/1‑94 (MQ=60)
                                               CGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCA                                                <  SRR4302543.5010741/94‑1 (MQ=60)
                                                GCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAG                                               >  SRR4302543.3197572/1‑94 (MQ=60)
                                                GCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAG                                               <  SRR4302543.6768802/94‑1 (MQ=60)
                                                 CCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGC                                              <  SRR4302543.7710261/94‑1 (MQ=60)
                                                 CCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGC                                              <  SRR4302543.1095402/94‑1 (MQ=60)
                                                 CCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGC                                              <  SRR4302543.6938686/94‑1 (MQ=60)
                                                  CAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCG                                             >  SRR4302543.3170111/1‑94 (MQ=60)
                                                  CAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCG                                             <  SRR4302543.4087167/94‑1 (MQ=60)
                                                  CAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCG                                             >  SRR4302543.41624/1‑94 (MQ=60)
                                                   AGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGT                                            >  SRR4302543.5577015/1‑94 (MQ=60)
                                                   AGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGT                                            >  SRR4302543.4116486/1‑94 (MQ=60)
                                                   AGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGC                                            >  SRR4302543.6554755/1‑94 (MQ=60)
                                                   AGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGCGCCAGAACACCAGACATATCGGGGCCAGCGT                                            >  SRR4302543.3408408/1‑94 (MQ=60)
                                                   AGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTCGCGAGATAGTGCCCGAACACCAGCCATATCGGGGCCAGCGC                                            >  SRR4302543.1681783/1‑94 (MQ=60)
                                                    GTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTC                                           >  SRR4302543.6954641/1‑94 (MQ=60)
                                                    GTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTC                                           <  SRR4302543.4427604/94‑1 (MQ=60)
                                                      TGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAG                                         >  SRR4302543.4569456/1‑94 (MQ=60)
                                                      TGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAG                                         <  SRR4302543.7905951/94‑1 (MQ=60)
                                                      TGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAG                                         >  SRR4302543.285493/1‑94 (MQ=60)
                                                      TGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAG                                         <  SRR4302543.5778192/94‑1 (MQ=60)
                                                      TGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAG                                         <  SRR4302543.2588351/94‑1 (MQ=60)
                                                          TGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCG                                     <  SRR4302543.2917295/94‑1 (MQ=60)
                                                             CTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCC                                  >  SRR4302543.7703644/1‑94 (MQ=60)
                                                             CTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCA                                  >  SRR4302543.1657395/1‑94 (MQ=60)
                                                              TGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAG                                 <  SRR4302543.6845039/94‑1 (MQ=60)
                                                              TGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAG                                 <  SRR4302543.2676921/94‑1 (MQ=60)
                                                               GAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGT                                >  SRR4302543.6021875/1‑94 (MQ=60)
                                                                AGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTT                               <  SRR4302543.5447052/94‑1 (MQ=60)
                                                                AGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTT                               <  SRR4302543.5341077/94‑1 (MQ=60)
                                                                 GAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTA                              <  SRR4302543.6420750/94‑1 (MQ=60)
                                                                 GAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTA                              <  SRR4302543.2707809/94‑1 (MQ=60)
                                                                  AAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAA                             <  SRR4302543.5366284/94‑1 (MQ=60)
                                                                  AAACCAGTGACGGACCGAGCGGCAGCCGAGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAA                             >  SRR4302543.2797831/1‑94 (MQ=60)
                                                                   AACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAA                            <  SRR4302543.5920656/94‑1 (MQ=60)
                                                                    ACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAG                           >  SRR4302543.7751381/1‑94 (MQ=60)
                                                                     CCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGT                          <  SRR4302543.8001633/94‑1 (MQ=60)
                                                                     CCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGT                          <  SRR4302543.988751/94‑1 (MQ=60)
                                                                     CCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGT                          >  SRR4302543.5521606/1‑94 (MQ=60)
                                                                      CAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTC                         >  SRR4302543.5876407/1‑94 (MQ=60)
                                                                      CAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTC                         <  SRR4302543.2148994/94‑1 (MQ=60)
                                                                       AGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAagcg                        >  SRR4302543.2218845/1‑90 (MQ=60)
                                                                       AGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCA                        >  SRR4302543.5991061/1‑94 (MQ=60)
                                                                       AGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCA                        >  SRR4302543.1790892/1‑94 (MQ=60)
                                                                       AGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCA                        <  SRR4302543.7782656/94‑1 (MQ=60)
                                                                        GTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAG                       <  SRR4302543.6639582/94‑1 (MQ=60)
                                                                         TGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGC                      >  SRR4302543.1395154/1‑94 (MQ=60)
                                                                         TGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGC                      >  SRR4302543.3247143/1‑94 (MQ=60)
                                                                         TGACGGACCGAGCGGCAGCCGGGGGTTCTTGGCGAGATAGTGCCAGCACACCAGACATATCGGGGGCAGCGTCAGCCCGCCcggtcacagccgc                      >  SRR4302543.1395158/1‑81 (MQ=60)
                                                                          GACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCA                     <  SRR4302543.5464523/94‑1 (MQ=60)
                                                                          GACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCA                     <  SRR4302543.7785117/94‑1 (MQ=60)
                                                                          GACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCA                     <  SRR4302543.7876308/94‑1 (MQ=60)
                                                                           ACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAA                    <  SRR4302543.5208549/94‑1 (MQ=60)
                                                                           ACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAA                    <  SRR4302543.3108748/94‑1 (MQ=60)
                                                                           ACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAA                    <  SRR4302543.384708/94‑1 (MQ=60)
                                                                            CGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAAC                   >  SRR4302543.1037352/1‑94 (MQ=60)
                                                                            CGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAAC                   <  SRR4302543.3258770/94‑1 (MQ=60)
                                                                            CGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAAC                   <  SRR4302543.3628894/94‑1 (MQ=60)
                                                                             GGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACA                  >  SRR4302543.4549789/1‑94 (MQ=60)
                                                                             GGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACA                  <  SRR4302543.2018269/94‑1 (MQ=60)
                                                                             GGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACA                  <  SRR4302543.2018054/94‑1 (MQ=60)
                                                                             GGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACA                  >  SRR4302543.7395501/1‑94 (MQ=60)
                                                                             GGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACA                  >  SRR4302543.1789596/1‑94 (MQ=60)
                                                                              GACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAG                 >  SRR4302543.7868059/1‑94 (MQ=60)
                                                                                CCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCG               <  SRR4302543.6842495/94‑1 (MQ=60)
                                                                                 CGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGC              <  SRR4302543.6237124/94‑1 (MQ=60)
                                                                                  GAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCA             >  SRR4302543.1633565/1‑94 (MQ=60)
                                                                                   GGCGGCAGCCAGGTGTTATTGGCGAGATAGTGCCAGAACACGAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCAT            <  SRR4302543.6754688/94‑1 (MQ=60)
                                                                                   AGCGGCAGCCGGGTGTTATTGGCGAGATGGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCAT            <  SRR4302543.3369417/94‑1 (MQ=60)
                                                                                   AGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCAT            <  SRR4302543.3541183/94‑1 (MQ=60)
                                                                                   AGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCAT            <  SRR4302543.1969496/94‑1 (MQ=60)
                                                                                    GCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATT           <  SRR4302543.6328774/94‑1 (MQ=60)
                                                                                    GCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATT           <  SRR4302543.7331179/94‑1 (MQ=60)
                                                                                    GCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATT           <  SRR4302543.4843455/94‑1 (MQ=60)
                                                                                    GCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATT           <  SRR4302543.5747212/94‑1 (MQ=60)
                                                                                     CGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTC          >  SRR4302543.6121924/1‑94 (MQ=60)
                                                                                     CGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTC          <  SRR4302543.1754078/94‑1 (MQ=60)
                                                                                     CGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTC          >  SRR4302543.5814853/1‑94 (MQ=60)
                                                                                     CGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTC          <  SRR4302543.3669282/94‑1 (MQ=60)
                                                                                     CGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTC          <  SRR4302543.766450/94‑1 (MQ=60)
                                                                                      GGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCC         <  SRR4302543.662389/94‑1 (MQ=60)
                                                                                      GGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCC         >  SRR4302543.3187880/1‑94 (MQ=60)
                                                                                        CAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCAC       <  SRR4302543.5369913/94‑1 (MQ=60)
                                                                                        CAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCAC       <  SRR4302543.4495503/94‑1 (MQ=60)
                                                                                        CAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCAC       <  SRR4302543.5684998/94‑1 (MQ=60)
                                                                                        CAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCAC       <  SRR4302543.2897082/94‑1 (MQ=60)
                                                                                         AGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACG      >  SRR4302543.2545737/1‑94 (MQ=60)
                                                                                         AGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACG      >  SRR4302543.7996747/1‑94 (MQ=60)
                                                                                          GCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACGA     >  SRR4302543.4121124/1‑94 (MQ=60)
                                                                                           CCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACGAC    <  SRR4302543.1595843/94‑1 (MQ=60)
                                                                                           CCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACGAC    >  SRR4302543.1315917/1‑94 (MQ=60)
                                                                                            CGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACGACT   >  SRR4302543.5219053/1‑94 (MQ=60)
                                                                                            CGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACGACT   <  SRR4302543.7736962/94‑1 (MQ=60)
                                                                                             GGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACGACTC  >  SRR4302543.2137794/1‑94 (MQ=60)
                                                                                             GGGTGTTATGGGCGAGATAGTGCCAGAACACCAGACAGATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACGACTC  <  SRR4302543.87833/94‑1 (MQ=60)
                                                                                             GGGTGGTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACGACTC  <  SRR4302543.5715179/94‑1 (MQ=60)
                                                                                             |                                                                                             
AGAGACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCAGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACGACTC  >  NC_000913/3847172‑3847358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑