Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,853,574	T→C	R8R (AGA→AGG)	yidG ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,853,574	0	T	C	99.8%	1325.0 / ‑5.7	422	R8R (AGA→AGG)	yidG	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (159/262); total (159/263)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01

Only 100 of 446 total aligned reads displayed.

AGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGT  >  NC_000913/3853484‑3853663

aGCCGACGCCATCAACGCGCCGTAGCCCAGCATGGTCCGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCt                                                                                         <  2:1965254/93‑1 (MQ=255)

  ccAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTgg                                                                                       >  2:2949110/1‑93 (MQ=255)

   cAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCCATGCGCCTGGc                                                                                      >  2:4540060/1‑93 (MQ=255)

   cAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGc                                                                                      <  1:1750828/93‑1 (MQ=255)

    aaagCCATCAACGCGACGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCt                                                                                     >  2:5526727/4‑93 (MQ=255)

    aaCGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCt                                                                                     >  1:1662353/1‑93 (MQ=255)

     aCGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGGCGGCAATGCGCCTGGCtt                                                                                    >  2:6543640/1‑93 (MQ=255)

      cGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCttt                                                                                   <  2:4767177/93‑1 (MQ=255)

      cGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCttt                                                                                   <  1:7830670/93‑1 (MQ=255)

      cGCCATCAACGCGCCCTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCttt                                                                                   <  2:7358995/93‑1 (MQ=255)

       gCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTg                                                                                  <  1:6366359/93‑1 (MQ=255)

        ccATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGc                                                                                 >  1:796033/1‑93 (MQ=255)

           tCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGc                                                                              >  2:581373/1‑93 (MQ=255)

            cAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCt                                                                             <  1:7035634/93‑1 (MQ=255)

             aaCGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTa                                                                            <  1:5129347/93‑1 (MQ=255)

             aaCGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTa                                                                            <  1:575369/93‑1 (MQ=255)

               cgcgCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATc                                                                          <  1:7180362/93‑1 (MQ=255)

               cgcgCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATc                                                                          <  2:876144/93‑1 (MQ=255)

                gcgcCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATcc                                                                         >  1:2087054/1‑93 (MQ=255)

                   ccGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGc                                                                      >  2:7552268/1‑93 (MQ=255)

                    cGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCa                                                                     >  2:5702369/1‑93 (MQ=255)

                      tAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATa                                                                   >  2:5309/1‑93 (MQ=255)

                        gCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATaca                                                                 >  2:6988430/1‑93 (MQ=255)

                        gCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATaca                                                                 >  1:529481/1‑93 (MQ=255)

                          ccAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATacaac                                                               >  1:437974/1‑93 (MQ=255)

                            aGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAacac                                                             >  1:3272380/1‑93 (MQ=255)

                            aGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAacac                                                             <  1:756270/93‑1 (MQ=255)

                             gCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACAcc                                                            >  1:6915403/1‑93 (MQ=255)

                              cATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCa                                                           <  2:4271442/93‑1 (MQ=255)

                              cATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCa                                                           <  1:2666146/93‑1 (MQ=255)

                              cATGGGACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGGCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCa                                                           <  1:2007988/93‑1 (MQ=255)

                               aTGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAg                                                          <  2:4036579/93‑1 (MQ=255)

                               aTGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAg                                                          <  1:2980223/93‑1 (MQ=255)

                               aTGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAg                                                          >  2:3623611/1‑93 (MQ=255)

                                tGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCTCCTGGCTTTGGGGCTATCTGTCATCCAACACCAgc                                                         >  1:5841869/1‑92 (MQ=255)

                                 ggTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTc                                                        <  2:2365235/93‑1 (MQ=255)

                                  gTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTcc                                                       >  1:4120140/1‑93 (MQ=255)

                                   tACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTccc                                                      <  2:251572/93‑1 (MQ=255)

                                      gAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATa                                                   <  1:3528793/93‑1 (MQ=255)

                                      gAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATa                                                   >  1:5510365/1‑93 (MQ=255)

                                       aaaCCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATaa                                                  >  2:3487278/1‑93 (MQ=255)

                                       aaaCCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATaa                                                  <  2:7115005/93‑1 (MQ=255)

                                       aaaCCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATaa                                                  <  2:1926381/93‑1 (MQ=255)

                                       aaaCCACGCCAGTGATGTGCGCTCCGGCTCCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATaa                                                  <  1:590702/93‑1 (MQ=255)

                                        aaCCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAAc                                                 >  2:5947113/1‑93 (MQ=255)

                                         aCCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACg                                                <  2:4987509/93‑1 (MQ=255)

                                         aCCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACg                                                >  1:4774463/1‑93 (MQ=255)

                                          ccACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGa                                               <  2:1635994/93‑1 (MQ=255)

                                           cACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGAt                                              <  2:6140406/93‑1 (MQ=255)

                                           cACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGAt                                              <  2:262977/93‑1 (MQ=255)

                                           cACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGAt                                              <  2:1254522/93‑1 (MQ=255)

                                           cACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGAt                                              <  2:3899080/93‑1 (MQ=255)

                                           cACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGAt                                              <  2:1443597/93‑1 (MQ=255)

                                             cGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCa                                            <  2:330948/93‑1 (MQ=255)

                                               ccAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCAcc                                          >  2:5602394/1‑93 (MQ=255)

                                                 aGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGc                                        <  2:7235245/93‑1 (MQ=255)

                                                  gTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGcc                                       >  2:129166/1‑93 (MQ=255)

                                                  gTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGCCATACAACACCAGTCCCATAACGATCACCGcc                                       >  2:5376826/1‑93 (MQ=255)

                                                    gATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCAc                                     <  2:1680048/93‑1 (MQ=255)

                                                         gcgcTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCa                                <  1:6249013/93‑1 (MQ=255)

                                                         gcgcTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGCCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCa                                <  2:3739350/93‑1 (MQ=255)

                                                          cgcTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCAt                               <  1:1189284/93‑1 (MQ=255)

                                                           gcTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATc                              <  1:7291046/93‑1 (MQ=255)

                                                           gcTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATc                              >  1:4616183/1‑93 (MQ=255)

                                                            cTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCa                             >  1:669682/1‑93 (MQ=255)

                                                            cTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCa                             >  1:3688143/1‑93 (MQ=255)

                                                             tCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCaa                            <  2:5280216/93‑1 (MQ=255)

                                                             tCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCaa                            <  2:6201964/93‑1 (MQ=255)

                                                             tCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCaa                            <  1:4340974/93‑1 (MQ=255)

                                                             tCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCaa                            >  2:1086754/1‑93 (MQ=255)

                                                                cgCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAatat                         <  2:2763878/92‑1 (MQ=255)

                                                                  gtGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTa                       <  1:1266633/92‑1 (MQ=255)

                                                                   tGCCGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTag                      >  2:7839771/1‑92 (MQ=255)

                                                                   tGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTaa                      <  2:2270194/93‑1 (MQ=255)

                                                                    gCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAg                     <  2:7583864/93‑1 (MQ=255)

                                                                      aGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCt                   >  2:3432297/1‑93 (MQ=255)

                                                                        tCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTaa                 >  1:6487450/1‑93 (MQ=255)

                                                                         ccTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAAt                <  2:63437/93‑1 (MQ=255)

                                                                         ccTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAAt                <  1:3979782/93‑1 (MQ=255)

                                                                          cTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATg               >  2:6737844/1‑93 (MQ=255)

                                                                          cTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATg               >  1:3597966/1‑93 (MQ=255)

                                                                           tGGTTCGGCAATGCGCCTGGCGTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGa              <  2:2158840/93‑1 (MQ=255)

                                                                           tGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGa              <  1:7748013/93‑1 (MQ=255)

                                                                            gggTCGGCAATGCGCCTGGCTTTGCGGCTATCCGTCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGAt             <  2:4404632/93‑1 (MQ=255)

                                                                              gTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATta           <  1:2290210/93‑1 (MQ=255)

                                                                                cGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATtaat         <  1:1484064/93‑1 (MQ=255)

                                                                                 ggCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATtaata        <  1:3144750/93‑1 (MQ=255)

                                                                                 ggCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATtaata        >  1:2136213/1‑93 (MQ=255)

                                                                                  gCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATtaataa       <  2:5159114/93‑1 (MQ=255)

                                                                                  gCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATtaataa       <  1:6131577/93‑1 (MQ=255)

                                                                                  gCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATtaataa       <  1:2434216/93‑1 (MQ=255)

                                                                                    aaTGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGc     >  1:1099633/1‑93 (MQ=255)

                                                                                    aaTGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGc     <  1:392922/93‑1 (MQ=255)

                                                                                    aaTGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGc     >  1:1014243/1‑93 (MQ=255)

                                                                                     aTGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCt    <  1:4147325/93‑1 (MQ=255)

                                                                                     aTGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCt    <  1:4888199/93‑1 (MQ=255)

                                                                                     aTGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCt    <  1:5378070/93‑1 (MQ=255)

                                                                                      tGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTg   >  1:3057049/1‑93 (MQ=255)

                                                                                      tGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTg   <  2:419242/93‑1 (MQ=255)

                                                                                       gcgcCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGt  <  2:3118971/93‑1 (MQ=255)

AGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGT  >  NC_000913/3853484‑3853663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 235 total aligned reads displayed.

GATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGTTGGT  >  NC_000913/3853481‑3853667

GATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGC                                                                                               >  SRR4302543.6655554/1‑94 (MQ=60)

 ATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCC                                                                                              <  SRR4302543.2706970/94‑1 (MQ=60)

 ATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCC                                                                                              >  SRR4302543.3726239/1‑94 (MQ=60)

 ATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGGGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCC                                                                                              >  SRR4302543.6676540/1‑94 (MQ=60)

  TAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCT                                                                                             <  SRR4302543.736511/94‑1 (MQ=60)

  TAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCT                                                                                             <  SRR4302543.6871535/94‑1 (MQ=60)

  TAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCT                                                                                             <  SRR4302543.6445824/94‑1 (MQ=60)

  TAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCT                                                                                             >  SRR4302543.6197431/1‑94 (MQ=60)

  TAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCT                                                                                             >  SRR4302543.6197430/1‑94 (MQ=60)

   AGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTG                                                                                            <  SRR4302543.1823677/94‑1 (MQ=60)

   AGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTG                                                                                            <  SRR4302543.3137305/94‑1 (MQ=60)

   AGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTG                                                                                            <  SRR4302543.3240569/94‑1 (MQ=60)

    GCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGG                                                                                           <  SRR4302543.7959962/94‑1 (MQ=60)

    GCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGG                                                                                           >  SRR4302543.425067/1‑94 (MQ=60)

     CCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGC                                                                                          >  SRR4302543.3331963/1‑94 (MQ=60)

      CAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCT                                                                                         <  SRR4302543.3967013/94‑1 (MQ=60)

      CAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCT                                                                                         >  SRR4302543.4482309/1‑94 (MQ=60)

      CAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCT                                                                                         >  SRR4302543.1029689/1‑94 (MQ=60)

      CAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCT                                                                                         <  SRR4302543.1766467/94‑1 (MQ=60)

      CAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCT                                                                                         >  SRR4302543.1677245/1‑94 (MQ=60)

       AACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTT                                                                                        >  SRR4302543.1522579/1‑94 (MQ=60)

        ACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTT                                                                                       <  SRR4302543.2201456/94‑1 (MQ=60)

        ACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTT                                                                                       <  SRR4302543.7852572/94‑1 (MQ=60)

         CGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTG                                                                                      <  SRR4302543.4608615/94‑1 (MQ=60)

         CGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTG                                                                                      <  SRR4302543.7662106/94‑1 (MQ=60)

         CGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTG                                                                                      <  SRR4302543.7904404/94‑1 (MQ=60)

          GCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGGGCTCCGGCTGCAGGCCTGGGACGGCAATGCGCCGGGCTTTGG                                                                                     >  SRR4302543.803033/1‑94 (MQ=60)

          GCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGC                                                                                     <  SRR4302543.6426235/94‑1 (MQ=60)

          GCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGC                                                                                     >  SRR4302543.6858527/1‑94 (MQ=60)

          GCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGC                                                                                     >  SRR4302543.803032/1‑94 (MQ=60)

          CCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGC                                                                                     <  SRR4302543.6426236/94‑1 (MQ=60)

           CCATCAACGCGCCGTAGCCCAGCATGGTACGAAGCCAGGGCAGTGATGTGCGCTCCGGCTGCAGTCCTGGTTCGGCAATGCGCCTGGCTTTGCG                                                                                    <  SRR4302543.487667/94‑1 (MQ=60)

           CCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCG                                                                                    <  SRR4302543.3292810/94‑1 (MQ=60)

           CCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCG                                                                                    >  SRR4302543.4183993/1‑94 (MQ=60)

           CCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCG                                                                                    <  SRR4302543.541590/94‑1 (MQ=60)

           CCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCG                                                                                    <  SRR4302543.4380755/94‑1 (MQ=60)

            CATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGG                                                                                   >  SRR4302543.1588197/1‑94 (MQ=60)

             ATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGC                                                                                  >  SRR4302543.2526183/1‑94 (MQ=60)

             ATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGC                                                                                  >  SRR4302543.2402881/1‑94 (MQ=60)

             ATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGC                                                                                  >  SRR4302543.7019691/1‑94 (MQ=60)

             ATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGC                                                                                  <  SRR4302543.1050198/94‑1 (MQ=60)

             ATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGC                                                                                  >  SRR4302543.116966/1‑94 (MQ=60)

              TCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCT                                                                                 <  SRR4302543.3609073/94‑1 (MQ=60)

              TCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTAGGTCGGCAATGCGCCTGGCTTTGCGGCT                                                                                 <  SRR4302543.5306986/94‑1 (MQ=60)

               CAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTA                                                                                <  SRR4302543.7103387/94‑1 (MQ=60)

                CACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTAT                                                                               <  SRR4302543.638797/94‑1 (MQ=60)

                AACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTAT                                                                               <  SRR4302543.5175706/94‑1 (MQ=60)

                AACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTAT                                                                               <  SRR4302543.1384187/94‑1 (MQ=60)

                AACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTAT                                                                               <  SRR4302543.580631/94‑1 (MQ=60)

                AACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTAT                                                                               >  SRR4302543.1984376/1‑94 (MQ=60)

                  CGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCC                                                                             <  SRR4302543.5509589/94‑1 (MQ=60)

                  CGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCC                                                                             <  SRR4302543.7250046/94‑1 (MQ=60)

                  CGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCC                                                                             >  SRR4302543.2105694/1‑94 (MQ=60)

                  CGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCC                                                                             <  SRR4302543.2690593/94‑1 (MQ=60)

                   GCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCG                                                                            <  SRR4302543.5011441/94‑1 (MQ=60)

                   GCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCG                                                                            >  SRR4302543.4638063/1‑94 (MQ=60)

                   GCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCG                                                                            <  SRR4302543.3971563/94‑1 (MQ=60)

                    CGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGG                                                                           >  SRR4302543.7265773/1‑94 (MQ=60)

                       CGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCAT                                                                        <  SRR4302543.5665024/94‑1 (MQ=60)

                       CGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCAT                                                                        <  SRR4302543.7305632/94‑1 (MQ=60)

                        GTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATA                                                                       >  SRR4302543.7705744/1‑94 (MQ=60)

                         TAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATAC                                                                      <  SRR4302543.4187817/94‑1 (MQ=60)

                         TAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATAC                                                                      <  SRR4302543.204623/94‑1 (MQ=60)

                          AGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACA                                                                     >  SRR4302543.534379/1‑94 (MQ=60)

                          AGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACA                                                                     <  SRR4302543.3619700/94‑1 (MQ=60)

                           GCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAA                                                                    >  SRR4302543.4689599/1‑94 (MQ=60)

                            CCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAAC                                                                   >  SRR4302543.442080/1‑94 (MQ=60)

                            CCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAAC                                                                   >  SRR4302543.1242530/1‑94 (MQ=60)

                              CAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACAC                                                                 >  SRR4302543.3301942/1‑94 (MQ=60)

                              CAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACAC                                                                 <  SRR4302543.3012254/94‑1 (MQ=60)

                               CGCATCGTACCAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACC                                                                <  SRR4302543.2129989/94‑1 (MQ=60)

                               AGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACC                                                                <  SRR4302543.762956/94‑1 (MQ=60)

                               AGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACC                                                                >  SRR4302543.759892/1‑94 (MQ=60)

                               AGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACC                                                                >  SRR4302543.6980406/1‑94 (MQ=60)

                               AGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACC                                                                >  SRR4302543.7396974/1‑94 (MQ=60)

                                 CATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAG                                                              >  SRR4302543.3074780/1‑94 (MQ=60)

                                 CATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAG                                                              >  SRR4302543.5892806/1‑94 (MQ=60)

                                 CATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAG                                                              <  SRR4302543.473108/94‑1 (MQ=60)

                                 CATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAG                                                              <  SRR4302543.105636/94‑1 (MQ=60)

                                 CATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAG                                                              <  SRR4302543.2690321/94‑1 (MQ=60)

                                 CATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAG                                                              <  SRR4302543.403627/94‑1 (MQ=60)

                                 CATGGGACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGGCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAG                                                              <  SRR4302543.2026033/94‑1 (MQ=60)

                                  ATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCTCCTGGCTTTGGGGCTATCTGTCATCCAACACCAGC                                                             >  SRR4302543.5895017/1‑94 (MQ=60)

                                  ATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGT                                                             >  SRR4302543.5895018/1‑94 (MQ=60)

                                  ATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGT                                                             >  SRR4302543.3511384/1‑94 (MQ=60)

                                  ATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGT                                                             >  SRR4302543.1697478/1‑94 (MQ=60)

                                  ATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGT                                                             <  SRR4302543.2415894/94‑1 (MQ=60)

                                  ATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGC                                                             >  SRR4302543.5895012/1‑94 (MQ=60)

                                   TGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTC                                                            <  SRR4302543.1406285/94‑1 (MQ=60)

                                    GGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCC                                                           >  SRR4302543.4157268/1‑94 (MQ=60)

                                    GGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCC                                                           <  SRR4302543.5208400/94‑1 (MQ=60)

                                       ACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCAT                                                        >  SRR4302543.4161870/1‑94 (MQ=60)

                                       ACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCAT                                                        >  SRR4302543.4161871/1‑94 (MQ=60)

                                       ACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCAT                                                        <  SRR4302543.3259018/94‑1 (MQ=60)

                                        CGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATA                                                       <  SRR4302543.4797157/94‑1 (MQ=60)

                                        CGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATA                                                       >  SRR4302543.5560396/1‑94 (MQ=60)

                                        CGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATA                                                       >  SRR4302543.4922852/1‑94 (MQ=60)

                                         GAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAA                                                      >  SRR4302543.3639500/1‑94 (MQ=60)

                                         GAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAA                                                      <  SRR4302543.3560234/94‑1 (MQ=60)

                                          AAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAAC                                                     <  SRR4302543.6467412/94‑1 (MQ=60)

                                          AAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAAC                                                     <  SRR4302543.3108385/94‑1 (MQ=60)

                                          AAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAAC                                                     >  SRR4302543.209098/1‑94 (MQ=60)

                                          AAACCACGCCAGTGATGTGCGCTCCGGCTCCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAAC                                                     <  SRR4302543.596129/94‑1 (MQ=60)

                                           AACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACG                                                    <  SRR4302543.2199712/94‑1 (MQ=60)

                                           AACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACG                                                    >  SRR4302543.4818100/1‑94 (MQ=60)

                                           AACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACG                                                    <  SRR4302543.5560925/94‑1 (MQ=60)

                                           AACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACG                                                    <  SRR4302543.7725183/94‑1 (MQ=60)

                                           AACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACG                                                    <  SRR4302543.3631571/94‑1 (MQ=60)

                                           AACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACG                                                    <  SRR4302543.1239312/94‑1 (MQ=60)

                                           AACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACG                                                    <  SRR4302543.3524721/94‑1 (MQ=60)

                                             CCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGAT                                                  <  SRR4302543.2219470/94‑1 (MQ=60)

                                              CACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATC                                                 <  SRR4302543.5132743/94‑1 (MQ=60)

                                                CGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCAC                                               <  SRR4302543.4329877/94‑1 (MQ=60)

                                                CGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCAC                                               <  SRR4302543.6628521/94‑1 (MQ=60)

                                                 GCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACC                                              >  SRR4302543.5381559/1‑94 (MQ=60)

                                                 GCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACC                                              <  SRR4302543.3777175/94‑1 (MQ=60)

                                                   CAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGC                                            >  SRR4302543.5964903/1‑94 (MQ=60)

                                                   CAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGC                                            >  SRR4302543.7815073/1‑94 (MQ=60)

                                                   CAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGC                                            >  SRR4302543.3815014/1‑94 (MQ=60)

                                                    ATTGATGTGCGCTCCGGCTGCAGTCCTGGGGCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCACAACGATCACCGCC                                           >  SRR4302543.7093787/1‑94 (MQ=60)

                                                    AGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCC                                           >  SRR4302543.6386744/1‑94 (MQ=60)

                                                    AGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCC                                           >  SRR4302543.4797306/1‑94 (MQ=60)

                                                    AGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCC                                           >  SRR4302543.5492828/1‑94 (MQ=60)

                                                    AGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCC                                           >  SRR4302543.7821190/1‑94 (MQ=60)

                                                    AGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCC                                           >  SRR4302543.1247094/1‑94 (MQ=60)

                                                      TGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCAC                                         <  SRR4302543.2138043/94‑1 (MQ=60)

                                                       GATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACG                                        <  SRR4302543.7882749/94‑1 (MQ=60)

                                                       GATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACG                                        <  SRR4302543.4050868/94‑1 (MQ=60)

                                                         TGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGAC                                      <  SRR4302543.1950198/94‑1 (MQ=60)

                                                           TGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCA                                    <  SRR4302543.7282800/94‑1 (MQ=60)

                                                            GCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCAT                                   <  SRR4302543.6307960/94‑1 (MQ=60)

                                                            GCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCAT                                   <  SRR4302543.4958721/94‑1 (MQ=60)

                                                             CGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATC                                  >  SRR4302543.2427862/1‑94 (MQ=60)

                                                             CGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATC                                  <  SRR4302543.1200008/94‑1 (MQ=60)

                                                              GCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCA                                 >  SRR4302543.675850/1‑94 (MQ=60)

                                                              GCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCA                                 >  SRR4302543.3720557/1‑94 (MQ=60)

                                                              GCTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCA                                 <  SRR4302543.7361415/94‑1 (MQ=60)

                                                               CTCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAA                                <  SRR4302543.4282159/94‑1 (MQ=60)

                                                                TCCGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAAT                               <  SRR4302543.4380349/94‑1 (MQ=60)

                                                                  CGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATAT                             >  SRR4302543.1995042/1‑94 (MQ=60)

                                                                  CGGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATAT                             <  SRR4302543.6615911/94‑1 (MQ=60)

                                                                   GGCTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATT                            >  SRR4302543.6303123/1‑94 (MQ=60)

                                                                     CTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAA                          >  SRR4302543.1246864/1‑94 (MQ=60)

                                                                     CTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAA                          >  SRR4302543.3589982/1‑94 (MQ=60)

                                                                     CTGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAA                          >  SRR4302543.6013913/1‑94 (MQ=60)

                                                                      TGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAG                         >  SRR4302543.7999040/1‑94 (MQ=60)

                                                                      TGCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAG                         <  SRR4302543.5364953/94‑1 (MQ=60)

                                                                       GCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGC                        <  SRR4302543.5941874/94‑1 (MQ=60)

                                                                       GCAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGC                        <  SRR4302543.5941873/94‑1 (MQ=60)

                                                                        GAGTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCT                       <  SRR4302543.2601788/94‑1 (MQ=60)

                                                                          GTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAA                     <  SRR4302543.7089250/94‑1 (MQ=60)

                                                                          GTCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAA                     >  SRR4302543.6548569/1‑94 (MQ=60)

                                                                           TCCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAAT                    <  SRR4302543.3767321/94‑1 (MQ=60)

                                                                            CCTGTGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATG                   <  SRR4302543.2381743/94‑1 (MQ=60)

                                                                            CCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCGTAACGATCACCGCCACGACCATCAATATTAAGCTAATG                   <  SRR4302543.2701192/94‑1 (MQ=60)

                                                                            CCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATG                   >  SRR4302543.3629717/1‑94 (MQ=60)

                                                                            CCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATG                   <  SRR4302543.2144137/94‑1 (MQ=60)

                                                                            CCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATG                   <  SRR4302543.6569568/94‑1 (MQ=60)

                                                                            CCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATG                   <  SRR4302543.4015074/94‑1 (MQ=60)

                                                                            CCTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATG                   >  SRR4302543.5816595/1‑94 (MQ=60)

                                                                             CTGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGA                  <  SRR4302543.5379541/94‑1 (MQ=60)

                                                                              TGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGAT                 <  SRR4302543.7821184/94‑1 (MQ=60)

                                                                              TGGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGAT                 >  SRR4302543.7007803/1‑94 (MQ=60)

                                                                               GGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATT                <  SRR4302543.164023/94‑1 (MQ=60)

                                                                               GGGTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATT                >  SRR4302543.3969922/1‑94 (MQ=60)

                                                                                 GTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAA              <  SRR4302543.2311115/94‑1 (MQ=60)

                                                                                 GTCGGCAATGCGCCTGGCTTTGCGTCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAA              <  SRR4302543.2868107/94‑1 (MQ=60)

                                                                                 GTCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAA              <  SRR4302543.3072758/94‑1 (MQ=60)

                                                                                  TCGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAAT             <  SRR4302543.6239178/94‑1 (MQ=60)

                                                                                   CGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATA            <  SRR4302543.1497430/94‑1 (MQ=60)

                                                                                   CGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATA            >  SRR4302543.2155327/1‑94 (MQ=60)

                                                                                   CGGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATA            >  SRR4302543.7183699/1‑94 (MQ=60)

                                                                                    GGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAA           <  SRR4302543.1683963/94‑1 (MQ=60)

                                                                                    GGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAA           <  SRR4302543.3173035/94‑1 (MQ=60)

                                                                                    GGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAA           <  SRR4302543.7165849/94‑1 (MQ=60)

                                                                                    GGCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAA           <  SRR4302543.559536/94‑1 (MQ=60)

                                                                                     GCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAG          <  SRR4302543.2456180/94‑1 (MQ=60)

                                                                                     GCAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAG          <  SRR4302543.6189654/94‑1 (MQ=60)

                                                                                      CAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGC         >  SRR4302543.1023217/1‑94 (MQ=60)

                                                                                      CAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGC         <  SRR4302543.4125583/94‑1 (MQ=60)

                                                                                      CAATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGC         >  SRR4302543.1109540/1‑94 (MQ=60)

                                                                                       AATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCT        <  SRR4302543.139433/94‑1 (MQ=60)

                                                                                       AATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCT        <  SRR4302543.396547/94‑1 (MQ=60)

                                                                                       AATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCT        >  SRR4302543.4406312/1‑94 (MQ=60)

                                                                                        ATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTG       <  SRR4302543.3008671/94‑1 (MQ=60)

                                                                                        ATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTG       >  SRR4302543.7942628/1‑94 (MQ=60)

                                                                                        ATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTG       >  SRR4302543.3084566/1‑94 (MQ=60)

                                                                                        ATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTG       <  SRR4302543.4932750/94‑1 (MQ=60)

                                                                                        ATGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTG       <  SRR4302543.5426815/94‑1 (MQ=60)

                                                                                         TGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGT      <  SRR4302543.5199016/94‑1 (MQ=60)

                                                                                         TGCGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGT      <  SRR4302543.680156/94‑1 (MQ=60)

                                                                                           CGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGTTG    <  SRR4302543.5211835/94‑1 (MQ=60)

                                                                                           CGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGTTG    >  SRR4302543.7535055/1‑94 (MQ=60)

                                                                                           CGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGTTG    <  SRR4302543.7428651/94‑1 (MQ=60)

                                                                                           CGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGTTG    <  SRR4302543.3239995/94‑1 (MQ=60)

                                                                                           CGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGTTG    <  SRR4302543.7428650/94‑1 (MQ=60)

                                                                                           CGCCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGTTG    <  SRR4302543.6393251/94‑1 (MQ=60)

                                                                                             GCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGTTGGT  <  SRR4302543.1128143/94‑1 (MQ=60)

                                                                                             CCTGGCTTTGCGGGTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGTTGGT  <  SRR4302543.510440/94‑1 (MQ=60)

                                                                                             CCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGTTGGT  >  SRR4302543.1543610/1‑94 (MQ=60)

GATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAAGCTAATGATTAATAAGCTGTTGGT  >  NC_000913/3853481‑3853667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`