Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,857,264 A→G G160G (GGT→GGC yidK ← putative cotransporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,857,2640AG99.2% 1179.5 / ‑2.8 383G160G (GGT→GGCyidKputative cotransporter
Reads supporting (aligned to +/- strand):  ref base A (1/2);  new base G (208/170);  total (209/174)
Fisher's exact test for biased strand distribution p-value = 5.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01

Only 100 of 405 total aligned reads displayed.

GTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCACCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAC  >  NC_000913/3857174‑3857353
                                                                                          |                                                                                         
gTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGcc                                                                                         >  1:4088761/1‑93 (MQ=255)
gTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGcc                                                                                         <  2:105254/93‑1 (MQ=255)
gTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGcc                                                                                         >  2:2186091/1‑93 (MQ=255)
 tCCGCCACTGCCATTGCGCGCAGTCTGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCg                                                                                        >  1:5947162/1‑93 (MQ=255)
  ccGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGt                                                                                       >  1:91002/1‑93 (MQ=255)
   cGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTg                                                                                      <  2:5747942/93‑1 (MQ=255)
   cGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTg                                                                                      <  1:4497620/93‑1 (MQ=255)
    cccACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTga                                                                                     <  2:3354972/92‑1 (MQ=255)
    cccACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTga                                                                                     <  1:1506645/92‑1 (MQ=255)
     ccACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTgag                                                                                    >  1:5854544/1‑93 (MQ=255)
       aCTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGaa                                                                                  >  1:83177/1‑93 (MQ=255)
       aCTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGaa                                                                                  >  2:2515080/1‑93 (MQ=255)
        cTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGACaaa                                                                                 <  2:3051491/93‑1 (MQ=255)
         tGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAAt                                                                                >  2:5203647/1‑93 (MQ=255)
          gCCATTTCGCGCAGTTCGCAGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATc                                                                               <  1:2213501/93‑1 (MQ=255)
           ccATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCt                                                                              <  1:7848167/93‑1 (MQ=255)
            cATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTg                                                                             >  2:2792672/1‑93 (MQ=255)
             aTTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGt                                                                            >  2:6894720/1‑93 (MQ=255)
             aTTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGt                                                                            <  1:6622995/93‑1 (MQ=255)
             aTTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGt                                                                            >  2:6404524/1‑93 (MQ=255)
              ttGGGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTa                                                                           >  1:3304452/1‑93 (MQ=255)
              ttGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGAGAGCCGCGCCGTGAGAAATCTGTa                                                                           >  2:5662415/1‑93 (MQ=255)
                  gcgcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGa                                                                       >  2:5452504/1‑93 (MQ=255)
                    gcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGAtt                                                                     >  2:171617/1‑93 (MQ=255)
                    gcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGAtt                                                                     <  2:5947085/93‑1 (MQ=255)
                     gaGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTc                                                                    <  1:1622423/92‑1 (MQ=255)
                     cAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTc                                                                    >  2:1792742/1‑93 (MQ=255)
                       gTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTccc                                                                  >  1:2649967/1‑93 (MQ=255)
                        tCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTcccc                                                                 <  1:2477344/93‑1 (MQ=255)
                        tCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTcccc                                                                 >  1:4942795/1‑93 (MQ=255)
                          cgccgATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGa                                                               <  1:5387733/93‑1 (MQ=255)
                            ccgATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACg                                                             >  2:7393817/1‑93 (MQ=255)
                             cgATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGt                                                            <  1:6886095/93‑1 (MQ=255)
                             cgATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGt                                                            >  1:6379032/1‑93 (MQ=255)
                              gATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTg                                                           >  2:6309244/1‑93 (MQ=255)
                              gATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTg                                                           >  2:6800479/1‑93 (MQ=255)
                              gATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTg                                                           <  2:1279264/93‑1 (MQ=255)
                               aTCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGa                                                          >  1:7066189/1‑93 (MQ=255)
                                tCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGaa                                                         >  2:4221203/1‑93 (MQ=255)
                                 cACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGaaa                                                        >  1:57157/1‑93 (MQ=255)
                                 cACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGaaa                                                        <  2:40749/93‑1 (MQ=255)
                                  aCCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAAc                                                       >  2:2571084/1‑93 (MQ=255)
                                   ccGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACa                                                      <  2:3730205/93‑1 (MQ=255)
                                   ccGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACa                                                      <  1:4873587/93‑1 (MQ=255)
                                     gCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAgg                                                    >  2:193726/1‑93 (MQ=255)
                                      cATACAAAATTCCCGCCAGACCAAGCAAAATTCCCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGc                                                   <  2:7810289/93‑1 (MQ=255)
                                      cATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATGGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGc                                                   <  2:4868261/93‑1 (MQ=255)
                                      cATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGc                                                   >  2:7840333/1‑93 (MQ=255)
                                       aTACAAAATTCCCGCCAGATCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCt                                                  >  1:7339874/1‑93 (MQ=255)
                                        tACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGCAATCTGTAGCGATTCCCCGACGTGAAACAGGCTg                                                 >  1:2038933/1‑93 (MQ=255)
                                        tACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTg                                                 >  1:1375776/1‑93 (MQ=255)
                                        tACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTg                                                 >  1:3622213/1‑93 (MQ=255)
                                        tACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTg                                                 >  1:4694716/1‑93 (MQ=255)
                                          cAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGtt                                               <  2:657484/93‑1 (MQ=255)
                                          cAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGtt                                               <  1:599227/93‑1 (MQ=255)
                                           aaaaTTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGctgctg                                              >  2:7043035/1‑93 (MQ=255)
                                             actccccGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAg                                            <  2:6972367/89‑1 (MQ=255)
                                               tccccGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAgcg                                          <  2:4469772/91‑1 (MQ=255)
                                                  ccGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCa                                       <  2:4669594/93‑1 (MQ=255)
                                                   ccccAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCaa                                      >  2:3497453/3‑93 (MQ=255)
                                                   cGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCaa                                      <  2:767614/93‑1 (MQ=255)
                                                    gCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAAc                                     >  1:2843754/1‑93 (MQ=255)
                                                    cccAGCCCAAGCAAAATTACCAGTAGCCAGATAGCCGCTCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAAc                                     <  2:5489400/92‑1 (MQ=255)
                                                     ccAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAAcg                                    >  2:1568302/1‑93 (MQ=255)
                                                      cAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAAcgc                                   >  2:6159856/1‑93 (MQ=255)
                                                       aGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAAcgcg                                  >  1:3723255/1‑93 (MQ=255)
                                                        gACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAAcgcac                                 <  1:7423962/93‑3 (MQ=255)
                                                        gACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAAcgcac                                 <  2:5364361/93‑3 (MQ=255)
                                                        gACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACgcgc                                 >  2:1195989/1‑93 (MQ=255)
                                                        gACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACgcgc                                 >  1:4252757/1‑93 (MQ=255)
                                                        gACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACgcgc                                 >  2:3213128/1‑93 (MQ=255)
                                                          ccAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGCGCGCCGACGCGCCg                               >  2:876059/1‑93 (MQ=255)
                                                           cAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCgg                              >  1:6749293/1‑93 (MQ=255)
                                                             aGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAg                            >  1:1267893/1‑93 (MQ=255)
                                                              gCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGt                           <  1:2771220/93‑1 (MQ=255)
                                                                aaaaTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTag                         <  1:1057621/93‑1 (MQ=255)
                                                                aaaaTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTag                         <  1:6435779/93‑1 (MQ=255)
                                                                aaaaTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTag                         >  2:4989924/1‑93 (MQ=255)
                                                                aaaaTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTag                         >  1:3464178/1‑93 (MQ=255)
                                                                 aaaTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTaga                        <  1:2964057/93‑1 (MQ=255)
                                                                  aaTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTagag                       >  2:5222626/1‑93 (MQ=255)
                                                                    ttACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGaa                     >  1:1812231/1‑93 (MQ=255)
                                                                     tACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAAc                    <  1:531259/93‑1 (MQ=255)
                                                                       ccAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACaa                  >  1:7625051/1‑93 (MQ=255)
                                                                         aGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATc                <  1:3070530/93‑1 (MQ=255)
                                                                         aGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATc                <  2:7095867/93‑1 (MQ=255)
                                                                          gTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCg               >  1:3995677/1‑93 (MQ=255)
                                                                            aGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGc             <  2:5906365/93‑1 (MQ=255)
                                                                               cAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGa          <  1:3186557/93‑1 (MQ=255)
                                                                               cAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGa          <  1:6250535/93‑1 (MQ=255)
                                                                               cAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGa          >  2:1452654/1‑93 (MQ=255)
                                                                                 gATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGaaa        >  1:5222415/1‑93 (MQ=255)
                                                                                 gATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGaaa        >  1:696020/1‑93 (MQ=255)
                                                                                 gATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGATGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGaaa        >  1:7763918/1‑93 (MQ=255)
                                                                                   tAGCGGCGCCGTGATAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGc      <  1:6109568/93‑1 (MQ=255)
                                                                                    aGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCa     >  2:2363899/1‑93 (MQ=255)
                                                                                      ccGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGa   <  2:456851/93‑1 (MQ=255)
                                                                                       cgcgCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAc  <  1:3954438/93‑1 (MQ=255)
                                                                                       cgcgCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAc  >  1:4321680/1‑93 (MQ=255)
                                                                                       cgcgCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAc  <  1:1675742/93‑1 (MQ=255)
                                                                                          |                                                                                         
GTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCACCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAC  >  NC_000913/3857174‑3857353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 220 total aligned reads displayed.
GGAGTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCACCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCG  >  NC_000913/3857171‑3857357
                                                                                             |                                                                                             
GGAGTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTCCCAGTAGCCAGATAGCCGCG                                                                                               <  SRR4302543.3279908/94‑1 (MQ=60)
  AGTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCC                                                                                             <  SRR4302543.4099126/94‑1 (MQ=60)
  AGTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCC                                                                                             >  SRR4302543.4125434/1‑94 (MQ=60)
   GTCCGCCACTGCCATTGCGCGCAGTCTGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCG                                                                                            >  SRR4302543.6001590/1‑94 (MQ=60)
   GTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCG                                                                                            >  SRR4302543.816293/1‑94 (MQ=60)
    TCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGT                                                                                           >  SRR4302543.91855/1‑94 (MQ=60)
     CCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCACGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTG                                                                                          >  SRR4302543.3298330/1‑94 (MQ=60)
     CCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTG                                                                                          <  SRR4302543.1965630/94‑1 (MQ=60)
      CGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGA                                                                                         <  SRR4302543.4538500/94‑1 (MQ=60)
       GCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAG                                                                                        >  SRR4302543.7063023/1‑94 (MQ=60)
       GCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAG                                                                                        >  SRR4302543.1916721/1‑94 (MQ=60)
       GCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAG                                                                                        >  SRR4302543.5760704/1‑94 (MQ=60)
       GCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAG                                                                                        >  SRR4302543.5907830/1‑94 (MQ=60)
       GCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAG                                                                                        <  SRR4302543.6823133/94‑1 (MQ=60)
       CCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAG                                                                                        <  SRR4302543.1520178/94‑1 (MQ=60)
        CCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGA                                                                                       >  SRR4302543.1810520/1‑94 (MQ=60)
         CACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAA                                                                                      >  SRR4302543.6253449/1‑94 (MQ=60)
         CACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAA                                                                                      >  SRR4302543.1753672/1‑94 (MQ=60)
         CACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAA                                                                                      >  SRR4302543.3309767/1‑94 (MQ=60)
         CACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAA                                                                                      >  SRR4302543.83947/1‑94 (MQ=60)
         CACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAA                                                                                      >  SRR4302543.4935067/1‑94 (MQ=60)
             GCGATTGCGCGCAGTCCGCCGATCACGGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCT                                                                                  <  SRR4302543.5106329/94‑1 (MQ=60)
             GCCATTTCGCGCAGTTCGCAGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCT                                                                                  <  SRR4302543.2233449/94‑1 (MQ=60)
             GCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTATCCAGATAGCCGCGCCGTGAGAAATCT                                                                                  >  SRR4302543.5943015/1‑94 (MQ=60)
             GCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCT                                                                                  <  SRR4302543.4013372/94‑1 (MQ=60)
             GCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCT                                                                                  <  SRR4302543.7426734/94‑1 (MQ=60)
              CCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTG                                                                                 <  SRR4302543.7922129/94‑1 (MQ=60)
              CCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTG                                                                                 <  SRR4302543.4784920/94‑1 (MQ=60)
              CCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTG                                                                                 <  SRR4302543.7974032/94‑1 (MQ=60)
               CATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGT                                                                                <  SRR4302543.2853410/94‑1 (MQ=60)
               CATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGT                                                                                >  SRR4302543.3384251/1‑94 (MQ=60)
                ATTGGGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTA                                                                               >  SRR4302543.3334266/1‑94 (MQ=60)
                ATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTA                                                                               >  SRR4302543.7452621/1‑94 (MQ=60)
                ATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTA                                                                               <  SRR4302543.6685457/94‑1 (MQ=60)
                ATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTA                                                                               <  SRR4302543.3640732/94‑1 (MQ=60)
                ATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTA                                                                               >  SRR4302543.3573057/1‑94 (MQ=60)
                 TTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAG                                                                              <  SRR4302543.4802145/94‑1 (MQ=60)
                 TTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGACAGACCAAGCAACATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAG                                                                              >  SRR4302543.1209480/1‑94 (MQ=60)
                  TGCGCGACGTCCCCCGATCCCCGCATACAAAATTCCCGCCAGACCAAGCAAAATTCCCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGC                                                                             <  SRR4302543.2757325/94‑1 (MQ=60)
                   GCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCG                                                                            <  SRR4302543.6632467/94‑1 (MQ=60)
                   GCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCG                                                                            <  SRR4302543.3898526/94‑1 (MQ=60)
                    CGCGCAGTCCGCGGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGA                                                                           <  SRR4302543.3509681/94‑1 (MQ=60)
                     GCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGAT                                                                          <  SRR4302543.2859845/94‑1 (MQ=60)
                      CGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATT                                                                         <  SRR4302543.3737790/94‑1 (MQ=60)
                        GAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCC                                                                       <  SRR4302543.1636881/94‑1 (MQ=60)
                        CGGTCCGCCGATCACCGCATAAAAAATTCCCGCCAGACGAAGCAAAATTGCCAGTAGCAAGATAGCCGCTCCGTGAGAAATCTGTAGCGATTCC                                                                       <  SRR4302543.7009241/94‑1 (MQ=60)
                        CAGTCCGCCCATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCC                                                                       <  SRR4302543.6010525/94‑1 (MQ=60)
                         AGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTGCCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCC                                                                      <  SRR4302543.3747725/94‑1 (MQ=60)
                           TCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCG                                                                    <  SRR4302543.2499751/94‑1 (MQ=60)
                           TCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCG                                                                    <  SRR4302543.5748284/94‑1 (MQ=60)
                            CCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGA                                                                   >  SRR4302543.4349993/1‑94 (MQ=60)
                            CCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGA                                                                   >  SRR4302543.1179461/1‑94 (MQ=60)
                             CGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGAC                                                                  <  SRR4302543.5436681/94‑1 (MQ=60)
                              ccaGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACG                                                                 <  SRR4302543.4414419/91‑1 (MQ=60)
                              GCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACG                                                                 <  SRR4302543.6175515/94‑1 (MQ=60)
                               CCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGT                                                                >  SRR4302543.6439052/1‑94 (MQ=60)
                                CGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTG                                                               <  SRR4302543.6950866/94‑1 (MQ=60)
                                 GATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGA                                                              >  SRR4302543.7131384/1‑94 (MQ=60)
                                 GATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGA                                                              >  SRR4302543.7134796/1‑94 (MQ=60)
                                 GATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGA                                                              >  SRR4302543.6005632/1‑94 (MQ=60)
                                  ATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAA                                                             <  SRR4302543.5406643/94‑1 (MQ=60)
                                  ATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAA                                                             >  SRR4302543.5580596/1‑94 (MQ=60)
                                  ATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAA                                                             >  SRR4302543.4972157/1‑94 (MQ=60)
                                   TCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAA                                                            >  SRR4302543.57658/1‑94 (MQ=60)
                                   TCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAA                                                            >  SRR4302543.7147500/1‑94 (MQ=60)
                                     CCCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACA                                                          <  SRR4302543.1281141/94‑1 (MQ=60)
                                     CCCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGAGATTCCCCGACGTGAAACA                                                          <  SRR4302543.3043478/94‑1 (MQ=60)
                                     ACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACA                                                          <  SRR4302543.6691211/94‑1 (MQ=60)
                                      CCGCATACCACATTCCCGCCAGACCAAGCGAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAG                                                         <  SRR4302543.4918011/94‑1 (MQ=60)
                                      CCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAG                                                         <  SRR4302543.4918010/94‑1 (MQ=60)
                                      CCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAG                                                         >  SRR4302543.2715924/1‑94 (MQ=60)
                                      CCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAG                                                         <  SRR4302543.6564832/94‑1 (MQ=60)
                                       CGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGG                                                        >  SRR4302543.3363873/1‑94 (MQ=60)
                                        GCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGC                                                       >  SRR4302543.1824229/1‑94 (MQ=60)
                                        GCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGC                                                       >  SRR4302543.1283029/1‑94 (MQ=60)
                                        GCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGC                                                       <  SRR4302543.6491652/94‑1 (MQ=60)
                                         CATACAAAATTCCCGCCAGATCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCT                                                      >  SRR4302543.7410487/1‑94 (MQ=60)
                                         CATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCT                                                      >  SRR4302543.1512674/1‑94 (MQ=60)
                                         CATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCT                                                      <  SRR4302543.6322028/94‑1 (MQ=60)
                                         CATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCT                                                      <  SRR4302543.1118239/94‑1 (MQ=60)
                                          ATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGCAATCTGTAGCGATTCCCCGACGTGAAACAGGCTG                                                     >  SRR4302543.2057229/1‑94 (MQ=60)
                                          ATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTG                                                     >  SRR4302543.4791427/1‑94 (MQ=60)
                                          ATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTG                                                     >  SRR4302543.1388138/1‑94 (MQ=60)
                                          ATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTG                                                     >  SRR4302543.4737589/1‑94 (MQ=60)
                                            ACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTT                                                   >  SRR4302543.1639115/1‑94 (MQ=60)
                                            ACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTT                                                   <  SRR4302543.6886782/94‑1 (MQ=60)
                                             CAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTG                                                  <  SRR4302543.5288417/94‑1 (MQ=60)
                                             CAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTG                                                  >  SRR4302543.833963/1‑94 (MQ=60)
                                             CAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTG                                                  >  SRR4302543.4100522/1‑94 (MQ=60)
                                             CAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTG                                                  <  SRR4302543.604717/94‑1 (MQ=60)
                                             CAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTG                                                  <  SRR4302543.7606023/94‑1 (MQ=60)
                                             CAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTG                                                  >  SRR4302543.2176893/1‑94 (MQ=60)
                                             CAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTG                                                  >  SRR4302543.5790058/1‑94 (MQ=60)
                                             CAAAATTCCCACCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCACGCCGTGAGAAAGCGGTATCGATTCCCCGACGTGAAACAGGCTGTTG                                                  <  SRR4302543.2539748/94‑1 (MQ=60)
                                              AAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGA                                                 <  SRR4302543.28204/94‑1 (MQ=60)
                                              AAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGA                                                 >  SRR4302543.4023943/1‑94 (MQ=60)
                                               ACATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAG                                                <  SRR4302543.7786025/94‑1 (MQ=60)
                                               AAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAG                                                >  SRR4302543.6663510/1‑94 (MQ=60)
                                               AAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAG                                                <  SRR4302543.7786024/94‑1 (MQ=60)
                                                AATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGC                                               >  SRR4302543.6366747/1‑94 (MQ=60)
                                                 ATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCG                                              >  SRR4302543.3159713/1‑94 (MQ=60)
                                                 ATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCG                                              >  SRR4302543.4173639/1‑94 (MQ=60)
                                                 ATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCG                                              <  SRR4302543.1851283/94‑1 (MQ=60)
                                                  TTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGC                                             <  SRR4302543.3714600/94‑1 (MQ=60)
                                                   TCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCC                                            <  SRR4302543.2961521/94‑1 (MQ=60)
                                                      CGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAAC                                         >  SRR4302543.2869733/1‑94 (MQ=60)
                                                      CGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAAC                                         <  SRR4302543.6015493/94‑1 (MQ=60)
                                                       GCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACG                                        >  SRR4302543.7010362/1‑94 (MQ=60)
                                                       GCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCCCCAACG                                        >  SRR4302543.4060067/1‑94 (MQ=60)
                                                        CCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGC                                       <  SRR4302543.3041838/94‑1 (MQ=60)
                                                        CCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGC                                       <  SRR4302543.7630677/94‑1 (MQ=60)
                                                        CCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGC                                       >  SRR4302543.2503986/1‑94 (MQ=60)
                                                         CAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGTGCCGTGAGAAATCTGTAGCGATTCCGCGACGTGAAACGGGCTGTTGAGCGCCAACGAG                                      >  SRR4302543.1599855/1‑94 (MQ=60)
                                                         CAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGTTGTTGAGCGCACACGCG                                      >  SRR4302543.6725534/1‑94 (MQ=60)
                                                         CAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCG                                      >  SRR4302543.3755996/1‑94 (MQ=60)
                                                         CAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCG                                      <  SRR4302543.3074872/94‑1 (MQ=60)
                                                         CAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCG                                      <  SRR4302543.876670/94‑1 (MQ=60)
                                                         CAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCC                                      >  SRR4302543.4525024/1‑94 (MQ=60)
                                                         CAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCCCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCG                                      <  SRR4302543.5306615/94‑1 (MQ=60)
                                                           GACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCC                                    >  SRR4302543.6971842/1‑94 (MQ=60)
                                                           GACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCC                                    >  SRR4302543.5878702/1‑94 (MQ=60)
                                                           GACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCC                                    >  SRR4302543.5870068/1‑94 (MQ=60)
                                                           GACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCACC                                    <  SRR4302543.7495162/94‑1 (MQ=60)
                                                           AACCAAGCAAAATTACCAGTAGCCAGATAGCTGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCC                                    <  SRR4302543.3968558/94‑1 (MQ=60)
                                                            ACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCG                                   <  SRR4302543.245254/94‑1 (MQ=60)
                                                            ACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCG                                   <  SRR4302543.4094182/94‑1 (MQ=60)
                                                             CCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGG                                  >  SRR4302543.6813030/1‑94 (MQ=60)
                                                              CAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCGAACGCGCCGGA                                 >  SRR4302543.2628501/1‑94 (MQ=60)
                                                               AAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAG                                <  SRR4302543.5287129/94‑1 (MQ=60)
                                                               AAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAG                                >  SRR4302543.1279232/1‑94 (MQ=60)
                                                               AAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAG                                <  SRR4302543.1008514/94‑1 (MQ=60)
                                                                 GCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTA                              <  SRR4302543.2796446/94‑1 (MQ=60)
                                                                 GCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTA                              <  SRR4302543.5211768/94‑1 (MQ=60)
                                                                  CAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAG                             >  SRR4302543.7200406/1‑94 (MQ=60)
                                                                  CAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAG                             >  SRR4302543.3495206/1‑94 (MQ=60)
                                                                  CAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAG                             <  SRR4302543.7842321/94‑1 (MQ=60)
                                                                  CAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAG                             <  SRR4302543.7842322/94‑1 (MQ=60)
                                                                  CAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAG                             <  SRR4302543.6870127/94‑1 (MQ=60)
                                                                  CAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAG                             >  SRR4302543.1495664/1‑94 (MQ=60)
                                                                   AAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGA                            <  SRR4302543.6496419/94‑1 (MQ=60)
                                                                   AAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGA                            <  SRR4302543.1067107/94‑1 (MQ=60)
                                                                   AAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGA                            <  SRR4302543.611574/94‑1 (MQ=60)
                                                                   AAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGA                            >  SRR4302543.429769/1‑94 (MQ=60)
                                                                    AAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAG                           <  SRR4302543.2990981/94‑1 (MQ=60)
                                                                    AAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAG                           <  SRR4302543.5035165/94‑1 (MQ=60)
                                                                      ATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAA                         <  SRR4302543.7820460/94‑1 (MQ=60)
                                                                      ATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAA                         >  SRR4302543.1828481/1‑94 (MQ=60)
                                                                      ATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAA                         <  SRR4302543.4650106/94‑1 (MQ=60)
                                                                      ATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAA                         <  SRR4302543.4650107/94‑1 (MQ=60)
                                                                      ATTACCAGTAGCCAGATAGCCGCCCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAA                         <  SRR4302543.7464940/94‑1 (MQ=60)
                                                                       TTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAAC                        <  SRR4302543.3113806/94‑1 (MQ=60)
                                                                        TACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACA                       <  SRR4302543.536182/94‑1 (MQ=60)
                                                                         ACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAA                      >  SRR4302543.7697410/1‑94 (MQ=60)
                                                                          CCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAAT                     <  SRR4302543.2316845/94‑1 (MQ=60)
                                                                          CCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAAT                     >  SRR4302543.2068482/1‑94 (MQ=60)
                                                                           CAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATC                    >  SRR4302543.1561983/1‑94 (MQ=60)
                                                                           CAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATC                    <  SRR4302543.899698/94‑1 (MQ=60)
                                                                           CAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATC                    <  SRR4302543.3473068/94‑1 (MQ=60)
                                                                           CAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATC                    >  SRR4302543.5379579/1‑94 (MQ=60)
                                                                           CAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATC                    <  SRR4302543.5997298/94‑1 (MQ=60)
                                                                            AGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCG                   <  SRR4302543.3098141/94‑1 (MQ=60)
                                                                            AGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCG                   >  SRR4302543.4031281/1‑94 (MQ=60)
                                                                             GTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGG                  >  SRR4302543.4593497/1‑94 (MQ=60)
                                                                             GTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGG                  <  SRR4302543.6487971/94‑1 (MQ=60)
                                                                             GTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGG                  >  SRR4302543.7602229/1‑94 (MQ=60)
                                                                              TAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAGCAATCGGC                 >  SRR4302543.2401808/1‑94 (MQ=60)
                                                                               AGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCA                >  SRR4302543.4348576/1‑94 (MQ=60)
                                                                                GCCCGATAGCCGCGCCGTGAGAAATCTGTAGCGGTTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAG               <  SRR4302543.1663686/94‑1 (MQ=60)
                                                                                 CCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGA              >  SRR4302543.6684390/1‑94 (MQ=60)
                                                                                  CAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAA             >  SRR4302543.872150/1‑94 (MQ=60)
                                                                                  CAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAA             <  SRR4302543.3215294/94‑1 (MQ=60)
                                                                                  CAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAA             <  SRR4302543.6309496/94‑1 (MQ=60)
                                                                                  CAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAA             >  SRR4302543.3195622/1‑94 (MQ=60)
                                                                                   AGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAA            >  SRR4302543.702396/1‑94 (MQ=60)
                                                                                   AGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAA            >  SRR4302543.4434096/1‑94 (MQ=60)
                                                                                   AGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAA            >  SRR4302543.5269442/1‑94 (MQ=60)
                                                                                   AGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGATGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAA            >  SRR4302543.7837185/1‑94 (MQ=60)
                                                                                    GATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAG           >  SRR4302543.2872447/1‑94 (MQ=60)
                                                                                    GATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAG           <  SRR4302543.1366764/94‑1 (MQ=60)
                                                                                    GATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAG           <  SRR4302543.7355284/94‑1 (MQ=60)
                                                                                    GATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAG           >  SRR4302543.6194713/1‑94 (MQ=60)
                                                                                    GATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAG           >  SRR4302543.1670519/1‑94 (MQ=60)
                                                                                     ATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAAcaggaagaaaga          >  SRR4302543.6111533/1‑82 (MQ=60)
                                                                                      TAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCA         <  SRR4302543.4267553/94‑1 (MQ=60)
                                                                                      TAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCA         <  SRR4302543.6167444/94‑1 (MQ=60)
                                                                                       AGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAG        >  SRR4302543.6398049/1‑94 (MQ=60)
                                                                                         CCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAC      <  SRR4302543.2694111/94‑1 (MQ=60)
                                                                                         CCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAC      >  SRR4302543.4360920/1‑94 (MQ=60)
                                                                                          CGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACG     <  SRR4302543.3949168/94‑1 (MQ=60)
                                                                                          CGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACG     <  SRR4302543.2567420/94‑1 (MQ=60)
                                                                                          CGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACG     <  SRR4302543.3949167/94‑1 (MQ=60)
                                                                                          CGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACG     <  SRR4302543.3989433/94‑1 (MQ=60)
                                                                                          CGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACG     <  SRR4302543.422240/94‑1 (MQ=60)
                                                                                          CGCGCCGTGAGAAATCTGTAGCCATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACG     <  SRR4302543.1610863/94‑1 (MQ=60)
                                                                                           GCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGC    <  SRR4302543.2343090/94‑1 (MQ=60)
                                                                                           GCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGC    >  SRR4302543.8011076/1‑94 (MQ=60)
                                                                                            CGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCC   <  SRR4302543.4550072/94‑1 (MQ=60)
                                                                                            CGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCC   <  SRR4302543.664189/94‑1 (MQ=60)
                                                                                            CGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCC   <  SRR4302543.6230840/94‑1 (MQ=60)
                                                                                             GCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCG  >  SRR4302543.502344/1‑94 (MQ=60)
                                                                                             |                                                                                             
GGAGTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCACCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCG  >  NC_000913/3857171‑3857357

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: