Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,857,264 |
A→G |
G160G (GGT→GGC) |
yidK ← |
putative cotransporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,857,264 | 0 | A | G | 100.0%
| 742.5
/ NA
| 237 | G160G (GGT→GGC) | yidK | putative cotransporter |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (120/117); total (120/117) |
Only 100 of 245 total aligned reads displayed.
GTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCACCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAC > NC_000913/3857174‑3857353
|
gTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGcc > 1:794176/1‑93 (MQ=255)
ccGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGt < 1:1971922/93‑1 (MQ=255)
cGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTg < 1:4579379/93‑1 (MQ=255)
gCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTga < 1:4264283/93‑1 (MQ=255)
ccACTGCCCTTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTgag > 2:4556727/1‑93 (MQ=255)
cACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTgaga < 1:3741049/93‑1 (MQ=255)
aCTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGaa > 2:928231/1‑93 (MQ=255)
aCTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGaa > 2:1970156/1‑93 (MQ=255)
cTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGaaa > 2:54611/1‑93 (MQ=255)
cTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGaaa > 2:1230006/1‑93 (MQ=255)
tGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAAt > 2:1740233/1‑93 (MQ=255)
gCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATc > 2:1006637/1‑93 (MQ=255)
gCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATc > 2:3718340/1‑93 (MQ=255)
gCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATc < 2:2615048/93‑1 (MQ=255)
gCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATc < 1:30185/93‑1 (MQ=255)
gCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATc > 1:2120408/1‑93 (MQ=255)
accATTGCGCCCAGTCCGCCGATCGCCGCATACAAAATTCCCGCCAGACCAAGCAAAATTCCCAGTAGCCAGATAGCCGCGCCGTGAGAAATc < 2:2069223/92‑1 (MQ=255)
ccATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCt < 1:3919633/93‑1 (MQ=255)
ccATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCt < 1:340873/93‑1 (MQ=255)
cATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTg > 1:4340811/1‑93 (MQ=255)
aTTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGt > 1:652312/1‑93 (MQ=255)
aTTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGt < 1:1213553/93‑1 (MQ=255)
tGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAg < 2:2470951/93‑1 (MQ=255)
gcgcgcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGc < 1:1682961/93‑1 (MQ=255)
gcgcgcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGc < 1:2451728/93‑1 (MQ=255)
gcgcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGa < 1:4147636/93‑1 (MQ=255)
gcgcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGa < 2:2137997/93‑1 (MQ=255)
cgcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGAt < 2:2165249/93‑1 (MQ=255)
gcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGAtt < 1:3593722/93‑1 (MQ=255)
aGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTcc > 1:1317757/1‑93 (MQ=255)
aGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTcc > 1:4498365/1‑93 (MQ=255)
gTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTccc > 2:2758003/1‑93 (MQ=255)
gTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTccc > 2:3373522/1‑93 (MQ=255)
gTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTccc < 1:2949720/93‑1 (MQ=255)
gTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTccc > 1:4543362/1‑93 (MQ=255)
tCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTcccc < 1:913092/93‑1 (MQ=255)
tCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTcccc > 2:1402440/1‑93 (MQ=255)
cgccgATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGa < 1:175894/93‑1 (MQ=255)
ccgATCCCCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACg > 2:2287872/1‑93 (MQ=255)
ccgATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACg > 1:1506393/1‑93 (MQ=255)
cgATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGt > 2:155346/1‑93 (MQ=255)
cgATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCCATTCCCCGACGt < 2:4630021/93‑1 (MQ=255)
gATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTg > 1:2898814/1‑93 (MQ=255)
tCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGaa > 1:2528777/1‑93 (MQ=255)
cGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAg > 2:50797/1‑93 (MQ=255)
cGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAg < 2:319525/93‑1 (MQ=255)
cGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAg > 1:3266018/1‑93 (MQ=255)
cATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGACAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGc < 1:1870304/93‑1 (MQ=255)
aTACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCt > 2:763961/1‑93 (MQ=255)
tACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTg > 2:4304474/1‑93 (MQ=255)
aCAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGt > 2:623872/1‑93 (MQ=255)
aCAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGt > 1:4565694/1‑93 (MQ=255)
aaaTTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGa > 1:238622/1‑93 (MQ=255)
aaaTTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGa > 1:2760191/1‑93 (MQ=255)
aaTTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAg < 2:2786975/93‑1 (MQ=255)
atccccGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAgc < 2:3246895/90‑1 (MQ=255)
tCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAgcgc > 2:721642/1‑93 (MQ=255)
ccGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCa > 2:817577/1‑93 (MQ=255)
ccGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCACGACGTGAAACAGGCTGTTGAGCGCCa > 1:3689560/1‑93 (MQ=255)
cGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCaa < 2:2490871/93‑1 (MQ=255)
cGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCaa < 1:1074360/93‑1 (MQ=255)
gCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAAc > 1:2286881/1‑93 (MQ=255)
gACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACgcgc < 2:3545879/93‑1 (MQ=255)
gACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACgcgc > 1:1027204/1‑93 (MQ=255)
gACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACgcgc < 1:4678190/93‑1 (MQ=255)
ccAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCg > 1:862758/1‑93 (MQ=255)
ccAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCg < 2:362475/93‑1 (MQ=255)
aaGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGa < 2:1111120/93‑1 (MQ=255)
gCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAga > 1:1397372/1‑92 (MQ=255)
gCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGt < 1:4327013/93‑1 (MQ=255)
cAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTa < 2:2198465/93‑1 (MQ=255)
cAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTa < 2:3938507/93‑1 (MQ=255)
cAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTa < 1:1000142/93‑1 (MQ=255)
aaaaTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTag > 2:797927/1‑93 (MQ=255)
aaaaTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTag > 1:2210580/1‑93 (MQ=255)
aaaTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTaga > 2:3043326/1‑93 (MQ=255)
aTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAgaga < 1:3893401/93‑1 (MQ=255)
ttACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGaa < 2:1658518/93‑1 (MQ=255)
ccAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACaa < 2:1333960/93‑1 (MQ=255)
aGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATc > 1:2410201/1‑93 (MQ=255)
aGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATc < 1:2543411/93‑1 (MQ=255)
gTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCg > 2:3371548/1‑93 (MQ=255)
gaGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCgg < 2:4254259/92‑1 (MQ=255)
aGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGc > 2:1916018/1‑93 (MQ=255)
aGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGc < 2:2316357/93‑1 (MQ=255)
gCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCa > 1:3976364/1‑93 (MQ=255)
gCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGCTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCa > 2:3444039/1‑93 (MQ=255)
ccAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAg > 2:1938035/1‑93 (MQ=255)
ccAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAg > 1:2859294/1‑93 (MQ=255)
cAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGa > 2:3069564/1‑93 (MQ=255)
gATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGaaa < 1:4062865/93‑1 (MQ=255)
gATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGaaa > 1:2164979/1‑93 (MQ=255)
gATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGaaa > 1:3139985/1‑93 (MQ=255)
tAGCCGCTCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGc < 2:4174019/93‑1 (MQ=255)
aGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCa > 2:117799/1‑93 (MQ=255)
aGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCa < 2:3508123/93‑1 (MQ=255)
gCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAg > 1:4631136/1‑93 (MQ=255)
ccGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGa < 1:1636906/93‑1 (MQ=255)
ccGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGa < 2:3975188/93‑1 (MQ=255)
ccGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGa < 2:1778553/93‑1 (MQ=255)
|
GTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCACCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAC > NC_000913/3857174‑3857353
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAGTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCACCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCG > NC_000913/3857172‑3857357
|
GAGTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTATCAGTAGCCAGATAGCCGCGC > SRR4302535.3328500/1‑94 (MQ=60)
AGTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCC > SRR4302535.799755/1‑94 (MQ=60)
GTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCG > SRR4302535.1296880/1‑94 (MQ=60)
CCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTG < SRR4302535.1986123/94‑1 (MQ=60)
CGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGA < SRR4302535.4610572/94‑1 (MQ=60)
GCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAG > SRR4302535.842784/1‑94 (MQ=60)
GCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAG < SRR4302535.2727135/94‑1 (MQ=60)
GCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAG > SRR4302535.2914891/1‑94 (MQ=60)
GCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAG < SRR4302535.4293486/94‑1 (MQ=60)
CCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGA > SRR4302535.3646707/1‑94 (MQ=60)
CCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGA > SRR4302535.4313012/1‑94 (MQ=60)
CACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAA < SRR4302535.3766938/94‑1 (MQ=60)
ACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAA > SRR4302535.3926982/1‑94 (MQ=60)
ACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAA > SRR4302535.43776/1‑94 (MQ=60)
CTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGACGTGAGAAAT > SRR4302535.4341715/1‑94 (MQ=60)
TGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATC > SRR4302535.4124371/1‑94 (MQ=60)
TGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATC > SRR4302535.2135702/1‑94 (MQ=60)
GCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCT < SRR4302535.30418/94‑1 (MQ=60)
GCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCT < SRR4302535.115199/94‑1 (MQ=60)
CCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTG < SRR4302535.343237/94‑1 (MQ=60)
CCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTG < SRR4302535.3946438/94‑1 (MQ=60)
CCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTG > SRR4302535.4370499/1‑94 (MQ=60)
CCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAATAGCCAGATAGCCGCGCCGTGAGAAATCTG > SRR4302535.2455521/1‑94 (MQ=60)
CATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGT > SRR4302535.656860/1‑94 (MQ=60)
ATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTA > SRR4302535.2226302/1‑94 (MQ=60)
ATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTA < SRR4302535.1222257/94‑1 (MQ=60)
TGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGC < SRR4302535.4588177/94‑1 (MQ=60)
GCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCG < SRR4302535.1695151/94‑1 (MQ=60)
GCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCG < SRR4302535.2469400/94‑1 (MQ=60)
GCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGAT < SRR4302535.4176036/94‑1 (MQ=60)
CGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATT < SRR4302535.2560650/94‑1 (MQ=60)
GCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTC < SRR4302535.3618663/94‑1 (MQ=60)
CAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCC > SRR4302535.1327171/1‑94 (MQ=60)
CAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCC > SRR4302535.4529248/1‑94 (MQ=60)
CAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCC < SRR4302535.4687690/94‑1 (MQ=60)
AGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCTC > SRR4302535.2406594/1‑94 (MQ=60)
AGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCC > SRR4302535.4574436/1‑94 (MQ=60)
GTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCC < SRR4302535.2970442/94‑1 (MQ=60)
TCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCG > SRR4302535.4624575/1‑94 (MQ=60)
TCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCG < SRR4302535.919581/94‑1 (MQ=60)
CCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGA > SRR4302535.175002/1‑94 (MQ=60)
CCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGA > SRR4302535.2155690/1‑94 (MQ=60)
CGCCGATCACCTCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGAC < SRR4302535.3750081/94‑1 (MQ=60)
CGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGAC < SRR4302535.177117/94‑1 (MQ=60)
GCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACG < SRR4302535.1034362/94‑1 (MQ=60)
GCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACG > SRR4302535.1517223/1‑94 (MQ=60)
CGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTG > SRR4302535.2919312/1‑94 (MQ=60)
GATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGA > SRR4302535.3973243/1‑94 (MQ=60)
ATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAA > SRR4302535.2546997/1‑94 (MQ=60)
CCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAG > SRR4302535.3288708/1‑94 (MQ=60)
CGCATACAAAATTCCCGCCAGACCAAGCAAAATTGCCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGG < SRR4302535.1705215/94‑1 (MQ=60)
CGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGG > SRR4302535.1673298/1‑94 (MQ=60)
CGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGG < SRR4302535.3525011/94‑1 (MQ=60)
GCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGC > SRR4302535.2192580/1‑94 (MQ=60)
CATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCT > SRR4302535.3192985/1‑94 (MQ=60)
CATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGACAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCT < SRR4302535.1883786/94‑1 (MQ=60)
TACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGT > SRR4302535.4596842/1‑94 (MQ=60)
ACAAAAGTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTT < SRR4302535.1890604/94‑1 (MQ=60)
AAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGA > SRR4302535.2779860/1‑94 (MQ=60)
AAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGA > SRR4302535.731133/1‑94 (MQ=60)
AAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGA > SRR4302535.240260/1‑94 (MQ=60)
AAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAG > SRR4302535.996261/1‑94 (MQ=60)
ATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCG < SRR4302535.4690379/94‑1 (MQ=60)
ATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCG > SRR4302535.4555334/1‑94 (MQ=60)
CCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCA > SRR4302535.4602864/1‑94 (MQ=60)
CCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCACGACGTGAAACAGGCTGTTGAGCGCCA > SRR4302535.3715099/1‑94 (MQ=60)
CGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAACTCTGTAGCGATGCCCCGACGTGAAACAGGCTGTTGAGCGCCAAC < SRR4302535.2286883/94‑1 (MQ=60)
CGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAAC < SRR4302535.1081999/94‑1 (MQ=60)
CGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAAC > SRR4302535.2303219/1‑94 (MQ=60)
GCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACG < SRR4302535.1626099/94‑1 (MQ=60)
CCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGC > SRR4302535.20073/1‑94 (MQ=60)
CAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCG > SRR4302535.3901288/1‑94 (MQ=60)
AGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGC > SRR4302535.1034498/1‑94 (MQ=60)
GACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCC < SRR4302535.4709756/94‑1 (MQ=60)
ACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCG < SRR4302535.745664/94‑1 (MQ=60)
ACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCG > SRR4302535.868858/1‑94 (MQ=60)
CCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGG > SRR4302535.1070254/1‑94 (MQ=60)
CAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGA > SRR4302535.1389202/1‑94 (MQ=60)
CAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGA < SRR4302535.1098339/94‑1 (MQ=60)
AAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAG > SRR4302535.236713/1‑94 (MQ=60)
AAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAG > SRR4302535.2432232/1‑94 (MQ=60)
AGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGT > SRR4302535.1816632/1‑94 (MQ=60)
AGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGA > SRR4302535.2907040/1‑94 (MQ=60)
AGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGA > SRR4302535.1407347/1‑94 (MQ=60)
GCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTA < SRR4302535.4356603/94‑1 (MQ=60)
CAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAG < SRR4302535.1007252/94‑1 (MQ=60)
CAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAG > SRR4302535.2226329/1‑94 (MQ=60)
CAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAG < SRR4302535.2497655/94‑1 (MQ=60)
AAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGA > SRR4302535.4012907/1‑94 (MQ=60)
AAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGA > SRR4302535.3838634/1‑94 (MQ=60)
AATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGA > SRR4302535.149366/1‑94 (MQ=60)
ATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAA < SRR4302535.3969273/94‑1 (MQ=60)
ATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAA < SRR4302535.3920089/94‑1 (MQ=60)
TTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAAC > SRR4302535.163563/1‑94 (MQ=60)
CCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAAT < SRR4302535.878775/94‑1 (MQ=60)
CAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATC > SRR4302535.2427552/1‑94 (MQ=60)
CAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATC < SRR4302535.3292281/94‑1 (MQ=60)
AGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCG < SRR4302535.4362029/94‑1 (MQ=60)
AGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCG < SRR4302535.2561724/94‑1 (MQ=60)
AGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCG < SRR4302535.3531392/94‑1 (MQ=60)
AGTAGCCAGAGAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCG < SRR4302535.3010973/94‑1 (MQ=60)
GTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTTAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGG > SRR4302535.4383007/1‑94 (MQ=60)
GTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGG < SRR4302535.2328599/94‑1 (MQ=60)
AGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCA > SRR4302535.876115/1‑94 (MQ=60)
AGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCA > SRR4302535.2557760/1‑94 (MQ=60)
AGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCA > SRR4302535.4003529/1‑94 (MQ=60)
GCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAG > SRR4302535.2879548/1‑94 (MQ=60)
GCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAG < SRR4302535.4602266/94‑1 (MQ=60)
GCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAG < SRR4302535.6123/94‑1 (MQ=60)
AGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAA > SRR4302535.2180504/1‑94 (MQ=60)
AGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAA > SRR4302535.3161834/1‑94 (MQ=60)
GATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAG < SRR4302535.4090670/94‑1 (MQ=60)
GATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAG < SRR4302535.2920564/94‑1 (MQ=60)
ATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGC > SRR4302535.3158380/1‑94 (MQ=60)
TAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCA < SRR4302535.2815227/94‑1 (MQ=60)
AGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAG > SRR4302535.4662559/1‑94 (MQ=60)
AGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAG < SRR4302535.4244187/94‑1 (MQ=60)
GCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGA < SRR4302535.3016383/94‑1 (MQ=60)
CCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAC < SRR4302535.1648730/94‑1 (MQ=60)
CCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAC < SRR4302535.2109005/94‑1 (MQ=60)
CCGCGCCGTGAGAAATCTGTAGCGATCCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAC < SRR4302535.1364962/94‑1 (MQ=60)
CGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACG > SRR4302535.4381178/1‑94 (MQ=60)
CGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACG < SRR4302535.4161070/94‑1 (MQ=60)
CGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACG > SRR4302535.3758032/1‑94 (MQ=60)
CGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACG < SRR4302535.3279371/94‑1 (MQ=60)
GCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCG > SRR4302535.4626887/1‑94 (MQ=60)
|
GAGTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCACCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCG > NC_000913/3857172‑3857357
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
