Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,858,839	C→T	intergenic (+36/+137)	yidL → / ← glvG	putative ARAC‑type regulatory protein/putative 6‑phospho‑beta‑glucosidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,858,839	0	C	T	99.8%	1449.8 / ‑5.9	408	intergenic (+36/+137)	yidL/glvG	putative ARAC‑type regulatory protein/putative 6‑phospho‑beta‑glucosidase
Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (198/209); total (199/209)
Fisher's exact test for biased strand distribution p-value = 4.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.80e-01

Only 100 of 417 total aligned reads displayed.

AGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGCAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTG  >  NC_000913/3858749‑3858928

 gCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAAc                                                                                        <  2:176658/93‑1 (MQ=255)

 gCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAAc                                                                                        >  1:2055692/1‑93 (MQ=255)

    gTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCa                                                                                     >  1:1754961/1‑93 (MQ=255)

    gTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCa                                                                                     <  2:5693365/93‑1 (MQ=255)

     tGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCAt                                                                                    >  2:7117772/1‑93 (MQ=255)

      gCTAAAGAATCCGGACCAGCACCCAACGGATGCCCGTCCACACAATTAACGTAACTCTGGCCAGTACGATTTGTTAGCCTCCAGTAACTCATc                                                                                   >  2:7078005/1‑93 (MQ=255)

      gCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATc                                                                                   <  1:5572106/93‑1 (MQ=255)

       cTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATcc                                                                                  <  1:2508671/93‑1 (MQ=255)

         aaaGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAg                                                                                >  2:874140/1‑93 (MQ=255)

         aaaGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAg                                                                                >  1:6044836/1‑93 (MQ=255)

          aaGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGa                                                                               >  2:7475187/1‑93 (MQ=255)

          aaGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGa                                                                               <  1:1299120/93‑1 (MQ=255)

           aGAATACGGACCAGCACCCAACGTATGCCAGTCCACACAATAAGCGTAACTCTGGCCAGTACGCTTTGTGGTCCTCCAGTAACTCATCCAGaa                                                                              <  1:3226319/93‑1 (MQ=255)

           aGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGaa                                                                              <  2:7800971/93‑1 (MQ=255)

            gAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAAt                                                                             >  2:5319838/1‑93 (MQ=255)

            gAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAAt                                                                             <  1:6293602/93‑1 (MQ=255)

             aaTACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATa                                                                            <  1:7456868/93‑1 (MQ=255)

              aTACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAg                                                                           >  1:7631224/1‑93 (MQ=255)

               tACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGc                                                                          >  1:4163858/1‑93 (MQ=255)

               tACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGc                                                                          >  1:442403/1‑93 (MQ=255)

               tACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGc                                                                          <  2:3173706/93‑1 (MQ=255)

                  ggACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCttt                                                                       <  1:5092568/93‑1 (MQ=255)

                    gccAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTgg                                                                     <  1:5378925/92‑1 (MQ=255)

                       aGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGa                                                                  >  1:7916736/1‑93 (MQ=255)

                       aGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGa                                                                  <  2:185982/93‑1 (MQ=255)

                           cccAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGa                                                              <  1:4635071/93‑1 (MQ=255)

                           cccAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGa                                                              <  2:4762670/93‑1 (MQ=255)

                           cccAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGa                                                              <  1:881534/93‑1 (MQ=255)

                           cccAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGa                                                              <  1:1658008/93‑1 (MQ=255)

                            ccAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAg                                                             >  2:2946356/1‑93 (MQ=255)

                             cAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAgg                                                            >  2:1184211/1‑93 (MQ=255)

                             cAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAgg                                                            <  2:3495015/93‑1 (MQ=255)

                             cAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAgg                                                            <  1:3565623/93‑1 (MQ=255)

                              aaCGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGgc                                                           >  2:403099/1‑93 (MQ=255)

                                 ggATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCt                                                        >  2:1045043/1‑93 (MQ=255)

                                 ggATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTCGCGACCGTGGCGCt                                                        >  2:1121053/1‑93 (MQ=255)

                                  gATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTc                                                       >  2:4166092/1‑93 (MQ=255)

                                  gATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTc                                                       <  2:2520528/93‑1 (MQ=255)

                                    tGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCgg                                                     <  1:5063217/93‑1 (MQ=255)

                                      ccAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTa                                                   <  2:3357343/93‑1 (MQ=255)

                                      ccAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTa                                                   <  1:2813327/93‑1 (MQ=255)

                                       cAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTAc                                                  <  1:3656511/93‑1 (MQ=255)

                                       cAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTAc                                                  >  2:2588746/1‑93 (MQ=255)

                                       cAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTAc                                                  <  2:6438749/93‑1 (MQ=255)

                                       cAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTAc                                                  <  1:2646842/93‑1 (MQ=255)

                                        aGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTAcc                                                 >  1:6149651/1‑93 (MQ=255)

                                        aGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTAcc                                                 >  1:7360349/1‑93 (MQ=255)

                                         gTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCg                                                >  1:5670559/1‑93 (MQ=255)

                                         gTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCg                                                >  1:1814318/1‑93 (MQ=255)

                                            ctcacaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGttt                                             <  2:4947256/91‑1 (MQ=255)

                                             acacaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGtttt                                            <  2:4371649/93‑1 (MQ=255)

                                             acacaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGtttt                                            >  2:801764/1‑93 (MQ=255)

                                             acacaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGtttt                                            >  2:6314283/1‑93 (MQ=255)

                                              cacaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTc                                           >  1:1003402/1‑93 (MQ=255)

                                              cacaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTc                                           <  1:5858587/93‑1 (MQ=255)

                                              cacaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTc                                           >  2:5527712/1‑93 (MQ=255)

                                               acaATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCg                                          <  1:1922305/93‑1 (MQ=255)

                                                  aTTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACa                                       >  2:618581/1‑93 (MQ=255)

                                                   ttAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACac                                      >  1:1193659/1‑92 (MQ=255)

                                                   ttAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACaa                                      <  1:66751/93‑1 (MQ=255)

                                                   ttAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACaa                                      <  2:5221213/93‑1 (MQ=255)

                                                    tAACGTAACTCTGGCCAGTTCGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAAc                                     <  2:7356345/93‑1 (MQ=255)

                                                    tAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAAc                                     <  2:589368/93‑1 (MQ=255)

                                                      aCGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGt                                   >  1:1438820/1‑93 (MQ=255)

                                                        gTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTaa                                 >  2:2988808/1‑93 (MQ=255)

                                                        gTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTaa                                 >  1:3289456/1‑93 (MQ=255)

                                                        gTAACTCTGGCCAGTACGCTTTGGTGGCCTCCAGTAACTCATACAGAATAGATTTGGCGACCGATGCGCTCGGTACCGTTTTCGACAACGTaa                                 >  1:5496209/1‑93 (MQ=255)

                                                         tAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAAt                                <  2:3876504/93‑1 (MQ=255)

                                                          aaCTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATc                               <  1:3817856/93‑1 (MQ=255)

                                                          aaCTCCGTCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATc                               <  1:2304412/93‑1 (MQ=255)

                                                           aCTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATcc                              >  1:2411172/1‑92 (MQ=255)

                                                            ctctGGCCAGCACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGc                             <  2:143840/93‑1 (MQ=255)

                                                             tctGGCCAGTTCGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCAcc                            <  1:1133147/93‑1 (MQ=255)

                                                             tctGGCCAGTACGCTTGGTTGGCCTCCAGTAACTCATCCAGAAGAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGcc                            <  1:3184849/93‑1 (MQ=255)

                                                              ctGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCt                           <  1:4893417/93‑1 (MQ=255)

                                                               tGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCtc                          >  1:3408631/1‑92 (MQ=255)

                                                                  ccAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCca                       <  2:7696198/93‑1 (MQ=255)

                                                                   cAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCcac                      >  1:6841829/1‑93 (MQ=255)

                                                                    aGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCcaca                     >  2:6793411/1‑93 (MQ=255)

                                                                    aGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCcaca                     <  2:3682318/93‑1 (MQ=255)

                                                                    aGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCcaca                     >  2:6589521/1‑93 (MQ=255)

                                                                     gTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAg                    >  2:2310030/1‑93 (MQ=255)

                                                                      tACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAgg                   <  2:5063468/93‑1 (MQ=255)

                                                                       aCGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGt                  <  2:4552136/93‑1 (MQ=255)

                                                                       aCGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGt                  <  2:329852/93‑1 (MQ=255)

                                                                        cGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTg                 <  2:5404256/93‑1 (MQ=255)

                                                                         gCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGc                <  2:2792331/93‑1 (MQ=255)

                                                                          cTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCt               >  1:7121324/1‑93 (MQ=255)

                                                                          cTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCt               >  2:6946090/1‑93 (MQ=255)

                                                                            ttgttgGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGATGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACACGTGCTGa             >  2:4077289/1‑93 (MQ=255)

                                                                            ttgttgGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGa             <  1:7388861/93‑1 (MQ=255)

                                                                            ttgttgGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGa             <  1:2981592/93‑1 (MQ=255)

                                                                             tgttaGCCACCAGTAAATCAACGAGAATAGCTATGGCGACCGAGGGGCTGGGGACGGTTTTCGGCATCGTAATCGCCTGCCACAGGAGCTGat            <  2:2034306/93‑1 (MQ=255)

                                                                              gttgGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGata           <  2:4826326/93‑1 (MQ=255)

                                                                                tgGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATg         <  1:6411532/93‑1 (MQ=255)

                                                                                 ggCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGa        >  2:7012213/1‑93 (MQ=255)

                                                                                    cTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACg     >  1:4046840/1‑93 (MQ=255)

                                                                                    cTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGGACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACg     >  1:432723/1‑93 (MQ=255)

                                                                                     tCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGc    >  1:3955113/1‑93 (MQ=255)

                                                                                     cccAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGc    <  1:185788/92‑1 (MQ=255)

AGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGCAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTG  >  NC_000913/3858749‑3858928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 223 total aligned reads displayed.

GTCAGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGCAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTGTTCC  >  NC_000913/3858746‑3858932

GTCAGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGT                                                                                               >  SRR4302543.6346556/1‑94 (MQ=60)

GTCAGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGT                                                                                               >  SRR4302543.4648215/1‑94 (MQ=60)

GTCAGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGT                                                                                               >  SRR4302543.4648220/1‑94 (MQ=60)

GTCAGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGT                                                                                               >  SRR4302543.931793/1‑94 (MQ=60)

GTCAGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGT                                                                                               >  SRR4302543.1055543/1‑94 (MQ=60)

GTCAGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGA                                                                                               >  SRR4302543.2726902/1‑94 (MQ=60)

  CAGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAA                                                                                             >  SRR4302543.264091/1‑94 (MQ=60)

   AGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAAC                                                                                            >  SRR4302543.2074095/1‑94 (MQ=60)

   AGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAAC                                                                                            >  SRR4302543.1723727/1‑94 (MQ=60)

    GCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACT                                                                                           >  SRR4302543.3987097/1‑94 (MQ=60)

    GCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACT                                                                                           <  SRR4302543.5682501/94‑1 (MQ=60)

    GCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACT                                                                                           >  SRR4302543.5489957/1‑94 (MQ=60)

      CGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCA                                                                                         >  SRR4302543.6899919/1‑94 (MQ=60)

      CGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCA                                                                                         >  SRR4302543.1770636/1‑94 (MQ=60)

       GTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCAT                                                                                        >  SRR4302543.5848056/1‑94 (MQ=60)

       GTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCAT                                                                                        <  SRR4302543.7434463/94‑1 (MQ=60)

       GTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCAT                                                                                        >  SRR4302543.3627015/1‑94 (MQ=60)

         GCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCC                                                                                      <  SRR4302543.5622813/94‑1 (MQ=60)

         GCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCC                                                                                      <  SRR4302543.6087001/94‑1 (MQ=60)

          CTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCA                                                                                     >  SRR4302543.6473726/1‑94 (MQ=60)

          CTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCA                                                                                     <  SRR4302543.2531448/94‑1 (MQ=60)

           TAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAG                                                                                    >  SRR4302543.6102277/1‑94 (MQ=60)

           TAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAG                                                                                    <  SRR4302543.3789126/94‑1 (MQ=60)

           TAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAG                                                                                    >  SRR4302543.1783971/1‑94 (MQ=60)

           TAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAG                                                                                    >  SRR4302543.6102058/1‑94 (MQ=60)

             AAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAA                                                                                  >  SRR4302543.7669371/1‑94 (MQ=60)

             AAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAA                                                                                  <  SRR4302543.1310663/94‑1 (MQ=60)

              AGAATACGGACCAGCACCCAACGTATGCCAGTCCACACAATAAGCGTAACTCTGGCCAGTACGCTTTGTGGTCCTCCAGTAACTCATCCAGAAT                                                                                 <  SRR4302543.3255486/94‑1 (MQ=60)

              AGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAAT                                                                                 <  SRR4302543.3255487/94‑1 (MQ=60)

              AGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAAT                                                                                 >  SRR4302543.550490/1‑94 (MQ=60)

              AGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAAT                                                                                 <  SRR4302543.2591995/94‑1 (MQ=60)

               GAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATA                                                                                >  SRR4302543.7709666/1‑94 (MQ=60)

               GAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATA                                                                                <  SRR4302543.6352849/94‑1 (MQ=60)

               GAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATA                                                                                >  SRR4302543.3276731/1‑94 (MQ=60)

                AATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAG                                                                               <  SRR4302543.6816747/94‑1 (MQ=60)

                AATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAG                                                                               >  SRR4302543.7703638/1‑94 (MQ=60)

                AATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAG                                                                               <  SRR4302543.6288380/94‑1 (MQ=60)

                AATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAG                                                                               <  SRR4302543.7528304/94‑1 (MQ=60)

                 ATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGC                                                                              >  SRR4302543.446539/1‑94 (MQ=60)

                 ATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGC                                                                              >  SRR4302543.7307156/1‑94 (MQ=60)

                 ATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGC                                                                              >  SRR4302543.4201559/1‑94 (MQ=60)

                    CGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTT                                                                           <  SRR4302543.4828800/94‑1 (MQ=60)

                     GGACCAGCGCCGAACGGATGCCAGTCCACACAATTAACGTACCGCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTG                                                                          <  SRR4302543.5009044/94‑1 (MQ=60)

                     GGACCAGCACCCAACGGATGCTAGTCCACACAATTAACGTAACTCTGGCCAGTGCGCTTTGTTGGCCTCCAGTATCTCATCCAGAATAGCTTTG                                                                          <  SRR4302543.3244283/94‑1 (MQ=60)

                     GGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTG                                                                          <  SRR4302543.3576247/94‑1 (MQ=60)

                     GGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTG                                                                          >  SRR4302543.4016438/1‑94 (MQ=60)

                     GGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTG                                                                          <  SRR4302543.5138707/94‑1 (MQ=60)

                       ACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGC                                                                        <  SRR4302543.1947046/94‑1 (MQ=60)

                       ACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGC                                                                        <  SRR4302543.3618459/94‑1 (MQ=60)

                         CAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGACTAGCTTTGGCGA                                                                      >  SRR4302543.1403665/1‑94 (MQ=60)

                         CAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGA                                                                      >  SRR4302543.7991103/1‑94 (MQ=60)

                         CAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGACCTCCAGTAACTCATCCAGAATAGCTTTGGCGA                                                                      >  SRR4302543.1609459/1‑94 (MQ=60)

                          AGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGAC                                                                     <  SRR4302543.6049856/94‑1 (MQ=60)

                          AGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGAC                                                                     >  SRR4302543.6169952/1‑94 (MQ=60)

                            CACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCG                                                                   <  SRR4302543.7353152/94‑1 (MQ=60)

                             ACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGA                                                                  >  SRR4302543.2283705/1‑94 (MQ=60)

                              CCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAG                                                                 >  SRR4302543.7920441/1‑94 (MQ=60)

                              CCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAG                                                                 <  SRR4302543.4138530/94‑1 (MQ=60)

                              CCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAG                                                                 <  SRR4302543.1672848/94‑1 (MQ=60)

                              CCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAG                                                                 >  SRR4302543.6510421/1‑94 (MQ=60)

                              CCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAG                                                                 <  SRR4302543.889354/94‑1 (MQ=60)

                              CCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAG                                                                 <  SRR4302543.826693/94‑1 (MQ=60)

                              CCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAG                                                                 >  SRR4302543.7444849/1‑94 (MQ=60)

                                ccccggatgcccgtccacactcttgacgtccCTCTGGCCAGTGCGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGCCCGAGGC                                                               <  SRR4302543.7084647/63‑1 (MQ=60)

                                CAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGC                                                               <  SRR4302543.449763/94‑1 (MQ=60)

                                CAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGC                                                               <  SRR4302543.3597172/94‑1 (MQ=60)

                                CAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGC                                                               <  SRR4302543.1738233/94‑1 (MQ=60)

                                CAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGC                                                               <  SRR4302543.747447/94‑1 (MQ=60)

                                CAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGC                                                               <  SRR4302543.116738/94‑1 (MQ=60)

                                  ACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGC                                                             >  SRR4302543.5446652/1‑94 (MQ=60)

                                   CGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCT                                                            >  SRR4302543.3554808/1‑94 (MQ=60)

                                    GGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTC                                                           >  SRR4302543.1258967/1‑94 (MQ=60)

                                     GATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCG                                                          <  SRR4302543.5121707/94‑1 (MQ=60)

                                       TGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGT                                                        <  SRR4302543.5109203/94‑1 (MQ=60)

                                         CCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTAC                                                      >  SRR4302543.3328282/1‑94 (MQ=60)

                                         CCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTAC                                                      <  SRR4302543.2839095/94‑1 (MQ=60)

                                         CCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTAC                                                      >  SRR4302543.4338030/1‑94 (MQ=60)

                                          CAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACC                                                     >  SRR4302543.7431135/1‑94 (MQ=60)

                                          CAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACC                                                     <  SRR4302543.4456187/94‑1 (MQ=60)

                                          CAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACC                                                     <  SRR4302543.3688626/94‑1 (MQ=60)

                                          CAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACC                                                     <  SRR4302543.2670828/94‑1 (MQ=60)

                                          CAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACC                                                     >  SRR4302543.6207884/1‑94 (MQ=60)

                                          CAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACC                                                     <  SRR4302543.7505818/94‑1 (MQ=60)

                                           AGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCG                                                    >  SRR4302543.5722316/1‑94 (MQ=60)

                                           AGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCG                                                    >  SRR4302543.1830593/1‑94 (MQ=60)

                                           AGTCCACACAATTAACATAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCCGAATAGCTTTGGCGACCGAGGCGCTCGGTACCG                                                    >  SRR4302543.1830594/1‑94 (MQ=60)

                                            GTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGT                                                   >  SRR4302543.2366700/1‑94 (MQ=60)

                                            GTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGT                                                   <  SRR4302543.4582136/94‑1 (MQ=60)

                                            GTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGT                                                   <  SRR4302543.7440214/94‑1 (MQ=60)

                                             TCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTT                                                  >  SRR4302543.5138679/1‑94 (MQ=60)

                                               CACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTT                                                >  SRR4302543.1427570/1‑94 (MQ=60)

                                               CACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTT                                                <  SRR4302543.5583832/94‑1 (MQ=60)

                                               CACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTT                                                <  SRR4302543.243861/94‑1 (MQ=60)

                                               CACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTT                                                <  SRR4302543.1815547/94‑1 (MQ=60)

                                                ACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGCCCGAGGCGCTCGGTACCGTTTTC                                               <  SRR4302543.6364151/94‑1 (MQ=60)

                                                ACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTC                                               >  SRR4302543.1012272/1‑94 (MQ=60)

                                                ACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTC                                               <  SRR4302543.6364152/94‑1 (MQ=60)

                                                 CACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCG                                              <  SRR4302543.5911918/94‑1 (MQ=60)

                                                  ACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGA                                             <  SRR4302543.1939630/94‑1 (MQ=60)

                                                   CAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGAC                                            >  SRR4302543.4435529/1‑94 (MQ=60)

                                                   CAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGAC                                            >  SRR4302543.4435530/1‑94 (MQ=60)

                                                    AATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACA                                           >  SRR4302543.5775811/1‑94 (MQ=60)

                                                    AATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACA                                           <  SRR4302543.2947941/94‑1 (MQ=60)

                                                    AATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACA                                           <  SRR4302543.1381788/94‑1 (MQ=60)

                                                    AATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACA                                           >  SRR4302543.376760/1‑94 (MQ=60)

                                                    AATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACA                                           <  SRR4302543.1755041/94‑1 (MQ=60)

                                                    AATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACA                                           <  SRR4302543.3893467/94‑1 (MQ=60)

                                                     ATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAA                                          <  SRR4302543.4090944/94‑1 (MQ=60)

                                                      TTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAAC                                         <  SRR4302543.6879262/94‑1 (MQ=60)

                                                      TTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAAC                                         <  SRR4302543.7703496/94‑1 (MQ=60)

                                                      TTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAAC                                         <  SRR4302543.67346/94‑1 (MQ=60)

                                                      TTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAAC                                         <  SRR4302543.856135/94‑1 (MQ=60)

                                                      TTAACGTAACTCTGGCCAGTACGCTTTGTTGCCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAAC                                         <  SRR4302543.856134/94‑1 (MQ=60)

                                                       TAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACG                                        <  SRR4302543.563847/94‑1 (MQ=60)

                                                       TAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACG                                        <  SRR4302543.3883244/94‑1 (MQ=60)

                                                        AACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGT                                       >  SRR4302543.1451821/1‑94 (MQ=60)

                                                         ACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTA                                      >  SRR4302543.4164236/1‑94 (MQ=60)

                                                          CGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAA                                     >  SRR4302543.3319141/1‑94 (MQ=60)

                                                          CGTAACTCTGGCCAGTACGCTTTGGTGGCCTCCAGTAACTCATACAGAATAGATTTGGCGACCGATGCGCTCGGTACCGTTTTCGACAACGTAA                                     >  SRR4302543.5546061/1‑94 (MQ=60)

                                                           GTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAAT                                    <  SRR4302543.5685663/94‑1 (MQ=60)

                                                           GTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACAGAGGCGCTCGGTACCGTTTTCGACAACGTAAT                                    <  SRR4302543.6457125/94‑1 (MQ=60)

                                                            TAACTCTGGCCAGTACGCTTTTTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATC                                   <  SRR4302543.2193097/94‑1 (MQ=60)

                                                            TAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATC                                   <  SRR4302543.4929478/94‑1 (MQ=60)

                                                            TAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATC                                   >  SRR4302543.1714025/1‑94 (MQ=60)

                                                             AACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCG                                  >  SRR4302543.1832748/1‑94 (MQ=60)

                                                             AACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCG                                  >  SRR4302543.3351243/1‑94 (MQ=60)

                                                             AACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCG                                  <  SRR4302543.3851517/94‑1 (MQ=60)

                                                             AACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCC                                  >  SRR4302543.2432962/1‑94 (MQ=60)

                                                             AACTCCGTCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCG                                  <  SRR4302543.2325401/94‑1 (MQ=60)

                                                              ACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGC                                 <  SRR4302543.3116902/94‑1 (MQ=60)

                                                              ACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGC                                 <  SRR4302543.3963683/94‑1 (MQ=60)

                                                              ACTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGC                                 >  SRR4302543.1025472/1‑94 (MQ=60)

                                                               CTCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCC                                >  SRR4302543.5166094/1‑94 (MQ=60)

                                                                TCTGGCCAGTTCGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCACCT                               <  SRR4302543.1143437/94‑1 (MQ=60)

                                                                TCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCT                               <  SRR4302543.4039302/94‑1 (MQ=60)

                                                                TCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCACCT                               <  SRR4302543.1143438/94‑1 (MQ=60)

                                                                TCTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTGTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCT                               <  SRR4302543.3213572/94‑1 (MQ=60)

                                                                TCTGGCCAGTACGCTTGGTTGGCCTCCAGTAACTCATCCAGAAGAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCT                               <  SRR4302543.3213571/94‑1 (MQ=60)

                                                                 CTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTG                              <  SRR4302543.5593229/94‑1 (MQ=60)

                                                                 CTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTG                              <  SRR4302543.5247126/94‑1 (MQ=60)

                                                                 CTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTG                              <  SRR4302543.4938026/94‑1 (MQ=60)

                                                                 CTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTG                              >  SRR4302543.4765177/1‑94 (MQ=60)

                                                                 CTGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTG                              <  SRR4302543.466399/94‑1 (MQ=60)

                                                                  TGGCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGC                             <  SRR4302543.2739347/94‑1 (MQ=60)

                                                                  TGGCCAGTACGCTTTGTGTGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGC                             <  SRR4302543.2739348/94‑1 (MQ=60)

                                                                    GCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCA                           >  SRR4302543.1135398/1‑94 (MQ=60)

                                                                    GCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCA                           >  SRR4302543.7582355/1‑94 (MQ=60)

                                                                    GCCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCA                           <  SRR4302543.3251955/94‑1 (MQ=60)

                                                                     CCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCAC                          <  SRR4302543.5224240/94‑1 (MQ=60)

                                                                     CCAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCAC                          >  SRR4302543.6906401/1‑94 (MQ=60)

                                                                      CAGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACA                         <  SRR4302543.2303701/94‑1 (MQ=60)

                                                                       CGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCCGCCGAGGCCCTCGGTCCCGTTTTCGACAACGTAATCGCCCGCCACAG                        >  SRR4302543.1906853/1‑94 (MQ=60)

                                                                       AGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAG                        <  SRR4302543.2499954/94‑1 (MQ=60)

                                                                       AGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAG                        >  SRR4302543.5134768/1‑94 (MQ=60)

                                                                       AGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAG                        >  SRR4302543.2041654/1‑94 (MQ=60)

                                                                       AGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAG                        <  SRR4302543.6525029/94‑1 (MQ=60)

                                                                       AGTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAG                        >  SRR4302543.1906852/1‑94 (MQ=60)

                                                                        GTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGG                       >  SRR4302543.932095/1‑94 (MQ=60)

                                                                        GTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGG                       >  SRR4302543.5792422/1‑94 (MQ=60)

                                                                        GTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGG                       >  SRR4302543.2368603/1‑94 (MQ=60)

                                                                        GTACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGG                       >  SRR4302543.2952278/1‑94 (MQ=60)

                                                                         TACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGG                      >  SRR4302543.2484097/1‑94 (MQ=60)

                                                                          ACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTG                     <  SRR4302543.3147549/94‑1 (MQ=60)

                                                                          ACGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGCGGCTCGGTACCGTCTTCGACAACGTAATCCCCTCCCACAGGCG                     >  SRR4302543.3194105/1‑94 (MQ=60)

                                                                           CGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCTCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGC                    <  SRR4302543.6274055/94‑1 (MQ=60)

                                                                           CGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGC                    >  SRR4302543.3391319/1‑94 (MQ=60)

                                                                           CGCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGGGC                    >  SRR4302543.4270750/1‑94 (MQ=60)

                                                                            GCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCT                   >  SRR4302543.6132384/1‑94 (MQ=60)

                                                                            GCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCT                   >  SRR4302543.1223501/1‑94 (MQ=60)

                                                                            GCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCT                   <  SRR4302543.1867157/94‑1 (MQ=60)

                                                                            GCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCT                   <  SRR4302543.2742666/94‑1 (MQ=60)

                                                                            GCTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCT                   <  SRR4302543.4875337/94‑1 (MQ=60)

                                                                             CTTTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTG                  >  SRR4302543.1200570/1‑94 (MQ=60)

                                                                               TTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGAT                <  SRR4302543.239996/94‑1 (MQ=60)

                                                                               TTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGAT                <  SRR4302543.3008666/94‑1 (MQ=60)

                                                                               TTGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGAT                <  SRR4302543.7459847/94‑1 (MQ=60)

                                                                                TGTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATA               >  SRR4302543.6960509/1‑94 (MQ=60)

                                                                                 GTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATAT              <  SRR4302543.1641933/94‑1 (MQ=60)

                                                                                 GTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATAT              >  SRR4302543.7321852/1‑94 (MQ=60)

                                                                                 GTTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATAT              <  SRR4302543.7091692/94‑1 (MQ=60)

                                                                                  TTGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATG             <  SRR4302543.1018151/94‑1 (MQ=60)

                                                                                   TGGCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGA            <  SRR4302543.6471910/94‑1 (MQ=60)

                                                                                     GCCTCCAGTAACTCATCCAGTATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAAC          <  SRR4302543.7507185/94‑1 (MQ=60)

                                                                                     GCCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAAC          <  SRR4302543.5550302/94‑1 (MQ=60)

                                                                                      CCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACG         >  SRR4302543.3304383/1‑94 (MQ=60)

                                                                                      CCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACG         >  SRR4302543.4083056/1‑94 (MQ=60)

                                                                                      CCTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACG         <  SRR4302543.1209489/94‑1 (MQ=60)

                                                                                       CTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGC        >  SRR4302543.4950262/1‑94 (MQ=60)

                                                                                       CTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGC        >  SRR4302543.1995361/1‑94 (MQ=60)

                                                                                       CTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGC        >  SRR4302543.3654946/1‑94 (MQ=60)

                                                                                       CTCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGC        >  SRR4302543.3990115/1‑94 (MQ=60)

                                                                                        TCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCT       <  SRR4302543.4296163/94‑1 (MQ=60)

                                                                                        CCCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCT       <  SRR4302543.187368/94‑1 (MQ=60)

                                                                                         CCAGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTG      <  SRR4302543.3509892/94‑1 (MQ=60)

                                                                                          CAGTAACTCATCCAGAAGAGCTTTGGCGACCGAAGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTGT     <  SRR4302543.7680630/94‑1 (MQ=60)

                                                                                           AGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTGTT    <  SRR4302543.521565/94‑1 (MQ=60)

                                                                                           AGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTGTT    >  SRR4302543.255162/1‑94 (MQ=60)

                                                                                           AGTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTGTT    >  SRR4302543.4743456/1‑94 (MQ=60)

                                                                                            GTAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTGTTC   >  SRR4302543.1416272/1‑94 (MQ=60)

                                                                                             TAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTGTTCC  >  SRR4302543.5549902/1‑94 (MQ=60)

GTCAGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAACGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGCAACTCATCCAGAATAGCTTTGGCGACCGAGGCGCTCGGTACCGTTTTCGACAACGTAATCGCCTGCCACAGGTGCTGATATGAACGCTGTTCC  >  NC_000913/3858746‑3858932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`