Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,873,733	G→A	R204R (CGG→CGA)	yidX →	putative replicase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,873,733	0	G	A	99.8%	1651.6 / NA	450	R204R (CGG→CGA)	yidX	putative replicase
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (223/225); minor base C (1/0); total (225/225)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 460 total aligned reads displayed.

CATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTG  >  NC_000913/3873643‑3873825

  ttACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCaa                                                                                          >  1:3880553/1‑93 (MQ=255)

  ttACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCaa                                                                                          <  1:7294818/93‑1 (MQ=255)

   tccTGCCGGTGACTGTTCCGCTGGCCATCATTCCTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCaaa                                                                                         <  2:7000861/91‑1 (MQ=255)

    aCTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAAc                                                                                        <  2:7869356/93‑1 (MQ=255)

    aCTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAAc                                                                                        <  1:4483351/93‑1 (MQ=255)

    aCTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAAc                                                                                        <  1:7515858/93‑1 (MQ=255)

      tGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAAcgc                                                                                      <  2:7199029/93‑1 (MQ=255)

       gCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAAcgcg                                                                                     <  2:3306469/93‑1 (MQ=255)

        ccAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGt                                                                                    <  2:4550148/93‑1 (MQ=255)

          aGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGttt                                                                                  >  2:1850319/1‑93 (MQ=255)

           gTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTa                                                                                 >  1:681373/1‑93 (MQ=255)

           gTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTa                                                                                 <  2:4893607/93‑1 (MQ=255)

           gTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTa                                                                                 <  1:4582625/93‑1 (MQ=255)

            tGACTGTTACGCTGGACATCA‑TACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGGTTATg                                                                               >  1:1875769/1‑93 (MQ=255)

              aCTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGc                                                                              >  1:5319309/1‑93 (MQ=255)

              aCTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGc                                                                              >  2:5926615/1‑93 (MQ=255)

              aCTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGc                                                                              <  1:1588456/93‑1 (MQ=255)

                tGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTg                                                                            >  1:2997923/1‑93 (MQ=255)

                tGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTg                                                                            >  1:2626290/1‑93 (MQ=255)

                 gTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGt                                                                           <  2:6149109/93‑1 (MQ=255)

                  ttACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGtt                                                                          <  1:6962987/93‑1 (MQ=255)

                  ttACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGtt                                                                          <  2:5231409/93‑1 (MQ=255)

                  ttACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGtt                                                                          >  1:5620920/1‑93 (MQ=255)

                  ttACGCTGGACATCATTACTGCACCGCTGCAATGTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGtt                                                                          <  1:7607668/93‑1 (MQ=255)

                        tGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTgcccg                                                                    >  1:3188772/1‑93 (MQ=255)

                          gACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTgcccgcc                                                                  <  2:271355/93‑1 (MQ=255)

                          gACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTgcccgcc                                                                  <  1:5897300/93‑1 (MQ=255)

                             atcatTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCcac                                                               >  2:422102/1‑93 (MQ=255)

                              tcatTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCcaca                                                              >  1:3360760/1‑93 (MQ=255)

                              tcatTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGGAAGCGAGGAAACGCGTTTATGCTGGTTGGCCGCCcaca                                                              >  2:3718407/1‑93 (MQ=255)

                                atTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGa                                                            <  2:4463535/93‑1 (MQ=255)

                                atTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGa                                                            >  1:7035187/1‑93 (MQ=255)

                                atTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGa                                                            >  2:7336529/1‑93 (MQ=255)

                                 gtACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCGGTTTGCCCGCCCACAGAt                                                           <  2:7078495/92‑1 (MQ=255)

                                    cTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTaa                                                        >  1:6123346/1‑93 (MQ=255)

                                      gCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAAtt                                                      >  2:1421561/1‑93 (MQ=255)

                                        aCCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCa                                                    <  1:7800319/93‑1 (MQ=255)

                                          cGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGc                                                  <  1:341414/93‑1 (MQ=255)

                                           gCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGca                                                 >  1:6545172/1‑93 (MQ=255)

                                           gCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGca                                                 >  1:7431757/1‑93 (MQ=255)

                                            cTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCTTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGcac                                                <  2:1606627/93‑1 (MQ=255)

                                             tGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGcaca                                               <  1:5179664/93‑1 (MQ=255)

                                             tGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGcaca                                               <  1:4659921/93‑1 (MQ=255)

                                             tGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGcaca                                               >  2:2918242/1‑93 (MQ=255)

                                             tGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGcaca                                               <  1:197164/93‑1 (MQ=255)

                                               cAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATa                                             <  2:3831774/93‑1 (MQ=255)

                                                aaTTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATAc                                            <  2:1211518/93‑1 (MQ=255)

                                                  tttCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACtt                                          <  2:2271604/93‑1 (MQ=255)

                                                  tttCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACtt                                          >  1:1065559/1‑93 (MQ=255)

                                                  tttCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACtt                                          >  2:5314868/1‑93 (MQ=255)

                                                   ttCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTtc                                         >  1:6007484/1‑93 (MQ=255)

                                                     cTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTtctc                                       <  2:5690679/93‑1 (MQ=255)

                                                      tGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCa                                      >  2:6274687/1‑93 (MQ=255)

                                                      tGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCa                                      >  1:3550027/1‑93 (MQ=255)

                                                       ggTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCaa                                     >  2:5028013/1‑93 (MQ=255)

                                                       ggTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCaa                                     >  1:3961760/1‑93 (MQ=255)

                                                         ttGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATa                                   >  1:1038810/1‑93 (MQ=255)

                                                         ttGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATa                                   <  2:3534627/93‑1 (MQ=255)

                                                         ttGTATATGCAGTAAACCAATAATCAGTAAGCAAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATa                                   <  1:5847122/93‑1 (MQ=255)

                                                          tGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAg                                  >  1:721624/1‑93 (MQ=255)

                                                          tGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAg                                  >  2:80242/1‑93 (MQ=255)

                                                          tGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAg                                  >  1:497346/1‑93 (MQ=255)

                                                          tGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAg                                  <  1:3513917/93‑1 (MQ=255)

                                                           gTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGc                                 <  1:4156092/93‑1 (MQ=255)

                                                            tataTGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCa                                >  2:377174/1‑93 (MQ=255)

                                                             atatGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCaa                               >  2:4805771/1‑93 (MQ=255)

                                                              tatGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCaaa                              >  2:6875540/1‑93 (MQ=255)

                                                              tatGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCaaa                              <  1:954074/93‑1 (MQ=255)

                                                              tatGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCaaa                              >  1:2222922/1‑93 (MQ=255)

                                                               atGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAac                             <  2:4152498/93‑1 (MQ=255)

                                                               atGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAac                             <  1:7226602/93‑1 (MQ=255)

                                                                tGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAacg                            >  1:1409243/1‑93 (MQ=255)

                                                                   aGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAacgcca                         >  1:2778420/1‑93 (MQ=255)

                                                                    gTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAacgccac                        >  2:7630877/1‑93 (MQ=255)

                                                                     tAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAacgccacg                       >  1:205279/1‑93 (MQ=255)

                                                                        aCCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAAcgccacgcca                    <  2:6050428/93‑1 (MQ=255)

                                                                        aCCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAAcgccacgcca                    <  2:1066928/93‑1 (MQ=255)

                                                                        aCCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAAcgccacgcca                    <  1:4803891/93‑1 (MQ=255)

                                                                         ccAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCAt                   >  2:407464/1‑93 (MQ=255)

                                                                          cAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATc                  >  1:841933/1‑93 (MQ=255)

                                                                           aataatCAGTAAGCGCGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACAAACTTCTCAATAGCAAACGCCCCGCCATCt                 >  2:2763028/1‑93 (MQ=255)

                                                                            ataatCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCtt                >  1:1804256/1‑93 (MQ=255)

                                                                            ataatCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCtt                >  2:6709868/1‑93 (MQ=255)

                                                                            ataatCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCtt                <  2:115884/93‑1 (MQ=255)

                                                                             taatCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTc               >  2:3126029/1‑93 (MQ=255)

                                                                              aatCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCa              >  1:6403641/1‑93 (MQ=255)

                                                                               atCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCaa             <  2:5493605/93‑1 (MQ=255)

                                                                               atCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCaa             <  1:1247289/93‑1 (MQ=255)

                                                                               atCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAACAGCAAACGCCACGCCATCTTCaa             <  2:4677728/93‑1 (MQ=255)

                                                                                tCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAg            <  1:2435336/93‑1 (MQ=255)

                                                                                 cAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAgg           >  1:4262128/1‑93 (MQ=255)

                                                                                  aGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGt          >  2:7510682/1‑93 (MQ=255)

                                                                                  aGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGt          >  2:39536/1‑93 (MQ=255)

                                                                                    tAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTa        >  1:6302806/1‑93 (MQ=255)

                                                                                     aaGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAg       <  2:217292/93‑1 (MQ=255)

                                                                                      aGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGa      >  2:580638/1‑93 (MQ=255)

                                                                                      aGCAGGCAAAGGCGTTTTGCCTGTTTGCCCGCCCCCAGATTAATTAAGACCTTACTTTTCATAACCAACCGCCCCGCCATCTTCAAGGttggt      >  2:511529/1‑90 (MQ=255)

                                                                                       gCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGAt     >  2:896326/1‑93 (MQ=255)

                                                                                       gCGAGCAAACGCGTTTATGCTGTGTGCCCGCCCACAGGTTAATTCAGCACATTCTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGAt     <  1:382826/93‑1 (MQ=255)

                                                                                          ggCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTg  <  2:6534686/93‑1 (MQ=255)

CATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTG  >  NC_000913/3873643‑3873825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 255 total aligned reads displayed.

CAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGG  >  NC_000913/3873640‑3873826

CAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGA                                                                                               >  SRR4302543.1887360/1‑94 (MQ=60)

 AGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAG                                                                                              <  SRR4302543.2857301/94‑1 (MQ=60)

 AGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAG                                                                                              >  SRR4302543.264265/1‑94 (MQ=60)

 AGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAG                                                                                              >  SRR4302543.2996679/1‑94 (MQ=60)

 AGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAG                                                                                              <  SRR4302543.1985762/94‑1 (MQ=60)

  GCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGC                                                                                             <  SRR4302543.2188156/94‑1 (MQ=60)

   CATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCA                                                                                            >  SRR4302543.2758791/1‑94 (MQ=60)

    ATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAA                                                                                           >  SRR4302543.2756740/1‑94 (MQ=60)

    ATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAA                                                                                           >  SRR4302543.3914808/1‑94 (MQ=60)

    ATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAA                                                                                           >  SRR4302543.1527376/1‑94 (MQ=60)

     TTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAA                                                                                          <  SRR4302543.7365209/94‑1 (MQ=60)

     TTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAA                                                                                          >  SRR4302543.3668853/1‑94 (MQ=60)

     TTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAA                                                                                          >  SRR4302543.1573436/1‑94 (MQ=60)

      TACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAAC                                                                                         <  SRR4302543.1948176/94‑1 (MQ=60)

      TACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAAC                                                                                         <  SRR4302543.3402896/94‑1 (MQ=60)

      TACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAAC                                                                                         <  SRR4302543.7381415/94‑1 (MQ=60)

      TACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAAC                                                                                         <  SRR4302543.1198787/94‑1 (MQ=60)

       ACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACG                                                                                        <  SRR4302543.4524071/94‑1 (MQ=60)

       ACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACG                                                                                        <  SRR4302543.7587624/94‑1 (MQ=60)

        CTGCCAGTGACTGTTACGCTGGACATCCTTACTGCACCGCTGCACTTTCTGGTTGTATATGGAGTAAACCAATAATCAGTACGCGAGCAAACGC                                                                                       >  SRR4302543.6681811/1‑94 (MQ=60)

        CTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGC                                                                                       >  SRR4302543.6681810/1‑94 (MQ=60)

         TGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCG                                                                                      >  SRR4302543.1491055/1‑94 (MQ=60)

         TGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCG                                                                                      <  SRR4302543.3282653/94‑1 (MQ=60)

         TGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCG                                                                                      <  SRR4302543.4768415/94‑1 (MQ=60)

          GCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGT                                                                                     <  SRR4302543.4041507/94‑1 (MQ=60)

           CCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTT                                                                                    <  SRR4302543.4287060/94‑1 (MQ=60)

           CCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTT                                                                                    >  SRR4302543.4982330/1‑94 (MQ=60)

           CCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTT                                                                                    >  SRR4302543.3931198/1‑94 (MQ=60)

            CAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTT                                                                                   >  SRR4302543.5748142/1‑94 (MQ=60)

             AGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTA                                                                                  >  SRR4302543.687668/1‑94 (MQ=60)

             AGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTA                                                                                  <  SRR4302543.7563756/94‑1 (MQ=60)

              GTGACTGTTACGCTGGCCATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTAAT                                                                                 <  SRR4302543.7068584/94‑1 (MQ=60)

              GTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTAT                                                                                 <  SRR4302543.5257545/94‑1 (MQ=60)

              GTGACTGTTACGCTGGACATCATTACTGCACCGCTGAAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTAT                                                                                 <  SRR4302543.6137142/94‑1 (MQ=60)

              GTGACTGTTACGCTGGACATCA‑TACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGGTTATG                                                                                >  SRR4302543.1892623/1‑94 (MQ=60)

               TGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATG                                                                                >  SRR4302543.1868006/1‑94 (MQ=60)

               TGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATG                                                                                <  SRR4302543.6075626/94‑1 (MQ=60)

               TGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATG                                                                                <  SRR4302543.868382/94‑1 (MQ=60)

               TGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATG                                                                                <  SRR4302543.7175937/94‑1 (MQ=60)

               TGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATG                                                                                >  SRR4302543.3203309/1‑94 (MQ=60)

                GACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGC                                                                               >  SRR4302543.5367373/1‑94 (MQ=60)

                GACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGC                                                                               <  SRR4302543.1006568/94‑1 (MQ=60)

                 ACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCT                                                                              >  SRR4302543.1318792/1‑94 (MQ=60)

                 ACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCT                                                                              <  SRR4302543.1602636/94‑1 (MQ=60)

                  CTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTG                                                                             >  SRR4302543.3025112/1‑94 (MQ=60)

                  CTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTG                                                                             >  SRR4302543.2650060/1‑94 (MQ=60)

                   TGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGT                                                                            >  SRR4302543.2430928/1‑94 (MQ=60)

                   TGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGT                                                                            >  SRR4302543.7330447/1‑94 (MQ=60)

                   TGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGT                                                                            >  SRR4302543.6951056/1‑94 (MQ=60)

                    GTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTT                                                                           >  SRR4302543.6702486/1‑94 (MQ=60)

                    GTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTT                                                                           >  SRR4302543.5672147/1‑94 (MQ=60)

                    GTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTT                                                                           >  SRR4302543.6889584/1‑94 (MQ=60)

                    GTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTT                                                                           >  SRR4302543.7794548/1‑94 (MQ=60)

                     TTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTT                                                                          <  SRR4302543.6203992/94‑1 (MQ=60)

                     TTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTT                                                                          <  SRR4302543.7028508/94‑1 (MQ=60)

                     TTACGCTGGACATCATTACTGCACCGCTGCAATGTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTT                                                                          <  SRR4302543.7679895/94‑1 (MQ=60)

                      TACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTG                                                                         <  SRR4302543.7300033/94‑1 (MQ=60)

                      TACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTG                                                                         <  SRR4302543.3007219/94‑1 (MQ=60)

                       ACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGC                                                                        <  SRR4302543.5289999/94‑1 (MQ=60)

                        CGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCC                                                                       >  SRR4302543.291812/1‑94 (MQ=60)

                        CGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCC                                                                       >  SRR4302543.936728/1‑94 (MQ=60)

                        CGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCC                                                                       >  SRR4302543.4536066/1‑94 (MQ=60)

                        CGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCC                                                                       >  SRR4302543.1739883/1‑94 (MQ=60)

                          CTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCG                                                                     >  SRR4302543.3217529/1‑94 (MQ=60)

                           TGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGC                                                                    >  SRR4302543.5983476/1‑94 (MQ=60)

                             GACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCC                                                                  <  SRR4302543.5951090/94‑1 (MQ=60)

                              ACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAGACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCACGCCCA                                                                 >  SRR4302543.2084719/1‑94 (MQ=60)

                               CATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCAC                                                                <  SRR4302543.945844/94‑1 (MQ=60)

                               CATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCAC                                                                >  SRR4302543.4500411/1‑94 (MQ=60)

                               CATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCAC                                                                <  SRR4302543.3565990/94‑1 (MQ=60)

                                ATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACA                                                               >  SRR4302543.3390985/1‑94 (MQ=60)

                                ATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACA                                                               <  SRR4302543.4534968/94‑1 (MQ=60)

                                ATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACA                                                               >  SRR4302543.1694572/1‑94 (MQ=60)

                                ATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACA                                                               <  SRR4302543.761587/94‑1 (MQ=60)

                                ATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACA                                                               >  SRR4302543.7287358/1‑94 (MQ=60)

                                 TCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAG                                                              <  SRR4302543.135818/94‑1 (MQ=60)

                                 TCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAG                                                              <  SRR4302543.201967/94‑1 (MQ=60)

                                  CATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGA                                                             >  SRR4302543.6370480/1‑94 (MQ=60)

                                  CATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGA                                                             >  SRR4302543.3870988/1‑94 (MQ=60)

                                  CATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGA                                                             >  SRR4302543.7102919/1‑94 (MQ=60)

                                   ATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGAT                                                            >  SRR4302543.2214872/1‑94 (MQ=60)

                                   ATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGAT                                                            <  SRR4302543.7542210/94‑1 (MQ=60)

                                    TTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATT                                                           <  SRR4302543.6490661/94‑1 (MQ=60)

                                      ACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAA                                                         >  SRR4302543.6181339/1‑94 (MQ=60)

                                      ACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAA                                                         <  SRR4302543.417491/94‑1 (MQ=60)

                                        TGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACTCGTTTATGCTGTTTGCCCGCCCACAGATTAATT                                                       >  SRR4302543.7673583/1‑94 (MQ=60)

                                        TGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATT                                                       >  SRR4302543.4833397/1‑94 (MQ=60)

                                        TGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATT                                                       <  SRR4302543.3573849/94‑1 (MQ=60)

                                        TGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATT                                                       <  SRR4302543.4381604/94‑1 (MQ=60)

                                          CACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCA                                                     <  SRR4302543.7384118/94‑1 (MQ=60)

                                           CCCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAG                                                    <  SRR4302543.901514/94‑1 (MQ=60)

                                           ACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAG                                                    >  SRR4302543.4676313/1‑94 (MQ=60)

                                           ACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAG                                                    <  SRR4302543.7873838/94‑1 (MQ=60)

                                            CCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGC                                                   <  SRR4302543.3858977/94‑1 (MQ=60)

                                             CGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCA                                                  >  SRR4302543.6606777/1‑94 (MQ=60)

                                             CGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCA                                                  <  SRR4302543.344557/94‑1 (MQ=60)

                                             CGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCA                                                  >  SRR4302543.7503006/1‑94 (MQ=60)

                                             CGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTAAGCA                                                  >  SRR4302543.2640217/1‑94 (MQ=60)

                                               CTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACA                                                >  SRR4302543.1884285/1‑94 (MQ=60)

                                               CTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACA                                                >  SRR4302543.2172691/1‑94 (MQ=60)

                                               CTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACA                                                >  SRR4302543.4648716/1‑94 (MQ=60)

                                                TGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACAT                                               <  SRR4302543.3455837/94‑1 (MQ=60)

                                                TGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACAT                                               <  SRR4302543.5226419/94‑1 (MQ=60)

                                                TGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACAT                                               <  SRR4302543.4702366/94‑1 (MQ=60)

                                                  CGATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATAC                                             >  SRR4302543.2433329/1‑94 (MQ=60)

                                                  CAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATAC                                             >  SRR4302543.5247137/1‑94 (MQ=60)

                                                   AATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACT                                            >  SRR4302543.7889829/1‑94 (MQ=60)

                                                   AATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACT                                            >  SRR4302543.3917032/1‑94 (MQ=60)

                                                    ATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACAcactc                                           >  SRR4302543.6065090/1‑89 (MQ=60)

                                                    ATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTT                                           <  SRR4302543.3026324/94‑1 (MQ=60)

                                                    ATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTT                                           >  SRR4302543.3043385/1‑94 (MQ=60)

                                                    ATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTT                                           >  SRR4302543.1064898/1‑94 (MQ=60)

                                                    ATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTT                                           >  SRR4302543.1075137/1‑94 (MQ=60)

                                                     TTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTC                                          <  SRR4302543.117201/94‑1 (MQ=60)

                                                      TTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCT                                         <  SRR4302543.1316802/94‑1 (MQ=60)

                                                       TCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTC                                        <  SRR4302543.404807/94‑1 (MQ=60)

                                                       TCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTC                                        <  SRR4302543.7135645/94‑1 (MQ=60)

                                                        CTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCA                                       <  SRR4302543.3906314/94‑1 (MQ=60)

                                                        CTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCA                                       >  SRR4302543.3581524/1‑94 (MQ=60)

                                                        CTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCA                                       >  SRR4302543.7168241/1‑94 (MQ=60)

                                                         TGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAA                                      >  SRR4302543.3996849/1‑94 (MQ=60)

                                                          GGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAAT                                     >  SRR4302543.6392116/1‑94 (MQ=60)

                                                          GGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAAT                                     >  SRR4302543.5835223/1‑94 (MQ=60)

                                                          GGTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAAT                                     <  SRR4302543.7026359/94‑1 (MQ=60)

                                                           GTTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATA                                    >  SRR4302543.1048055/1‑94 (MQ=60)

                                                            TTGTATATGCAGTAACCCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCCCAGATTAATTCAGCACATACTTCTCAATAG                                   <  SRR4302543.1911544/94‑1 (MQ=60)

                                                            TTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAG                                   <  SRR4302543.5934389/94‑1 (MQ=60)

                                                            TTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAG                                   >  SRR4302543.728136/1‑94 (MQ=60)

                                                            TTGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAG                                   >  SRR4302543.501943/1‑94 (MQ=60)

                                                            TTGTATATGCAGTAAACCAATAATCAGTAAGCAAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAG                                   <  SRR4302543.5900320/94‑1 (MQ=60)

                                                             TGTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGC                                  <  SRR4302543.3545305/94‑1 (MQ=60)

                                                              GTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCA                                 >  SRR4302543.5923476/1‑94 (MQ=60)

                                                              GTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCA                                 <  SRR4302543.4193675/94‑1 (MQ=60)

                                                              GTATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCA                                 >  SRR4302543.4822656/1‑94 (MQ=60)

                                                               TATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAA                                <  SRR4302543.7908197/94‑1 (MQ=60)

                                                               TATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAA                                >  SRR4302543.3494771/1‑94 (MQ=60)

                                                                ATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAA                               >  SRR4302543.1961838/1‑94 (MQ=60)

                                                                ATATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAA                               >  SRR4302543.2242986/1‑94 (MQ=60)

                                                                 TATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAAC                              <  SRR4302543.962439/94‑1 (MQ=60)

                                                                 TATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAAC                              <  SRR4302543.6048027/94‑1 (MQ=60)

                                                                  ATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACG                             >  SRR4302543.1421978/1‑94 (MQ=60)

                                                                  ATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACG                             <  SRR4302543.462049/94‑1 (MQ=60)

                                                                  ATGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACG                             <  SRR4302543.7296615/94‑1 (MQ=60)

                                                                   TGCAGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGC                            <  SRR4302543.7589116/94‑1 (MQ=60)

                                                                      AGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCAC                         <  SRR4302543.2323586/94‑1 (MQ=60)

                                                                      AGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCAC                         <  SRR4302543.799738/94‑1 (MQ=60)

                                                                      AGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCAC                         >  SRR4302543.646044/1‑94 (MQ=60)

                                                                      AGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCAC                         >  SRR4302543.1069333/1‑94 (MQ=60)

                                                                      AGTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCAC                         >  SRR4302543.5861711/1‑94 (MQ=60)

                                                                       GTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACG                        >  SRR4302543.342054/1‑94 (MQ=60)

                                                                       GTAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACG                        >  SRR4302543.4171458/1‑94 (MQ=60)

                                                                       ATAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACG                        <  SRR4302543.6601302/94‑1 (MQ=60)

                                                                        TAAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGC                       <  SRR4302543.6324437/94‑1 (MQ=60)

                                                                         AAACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCC                      >  SRR4302543.7081383/1‑94 (MQ=60)

                                                                           ACCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCAT                    <  SRR4302543.4847784/94‑1 (MQ=60)

                                                                            CCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATC                   >  SRR4302543.3304142/1‑94 (MQ=60)

                                                                            CCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATC                   >  SRR4302543.849375/1‑94 (MQ=60)

                                                                            CCAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGACCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGACACGACATC                   >  SRR4302543.3304141/1‑94 (MQ=60)

                                                                             CAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACTCCACGCCATCT                  >  SRR4302543.1628520/1‑94 (MQ=60)

                                                                             CAATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCT                  <  SRR4302543.4942918/94‑1 (MQ=60)

                                                                              AATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTT                 >  SRR4302543.1820404/1‑94 (MQ=60)

                                                                              AATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTT                 <  SRR4302543.7846778/94‑1 (MQ=60)

                                                                              AATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTT                 >  SRR4302543.4229163/1‑94 (MQ=60)

                                                                               ATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTC                <  SRR4302543.5656242/94‑1 (MQ=60)

                                                                               ATAATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTC                >  SRR4302543.2567917/1‑94 (MQ=60)

                                                                                  ATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAG             <  SRR4302543.1258485/94‑1 (MQ=60)

                                                                                  ATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAG             >  SRR4302543.200940/1‑94 (MQ=60)

                                                                                  ATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAG             <  SRR4302543.4643666/94‑1 (MQ=60)

                                                                                  ATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAG             <  SRR4302543.6258188/94‑1 (MQ=60)

                                                                                  ATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAG             <  SRR4302543.2317071/94‑1 (MQ=60)

                                                                                  ATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAG             >  SRR4302543.6040193/1‑94 (MQ=60)

                                                                                  ATCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAG             <  SRR4302543.7376138/94‑1 (MQ=60)

                                                                                   TCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGG            <  SRR4302543.3450804/94‑1 (MQ=60)

                                                                                   TCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGG            >  SRR4302543.4300837/1‑94 (MQ=60)

                                                                                   TCAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGG            <  SRR4302543.2457308/94‑1 (MQ=60)

                                                                                    CAGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGT           <  SRR4302543.1149387/94‑1 (MQ=60)

                                                                                     AGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTT          >  SRR4302543.5139159/1‑94 (MQ=60)

                                                                                     AGTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTT          >  SRR4302543.5139161/1‑94 (MQ=60)

                                                                                      GTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTA         >  SRR4302543.72825/1‑94 (MQ=60)

                                                                                      GTAAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTA         >  SRR4302543.7312604/1‑94 (MQ=60)

                                                                                        AAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGT       >  SRR4302543.2729465/1‑94 (MQ=60)

                                                                                        AAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGA       <  SRR4302543.6406749/94‑1 (MQ=60)

                                                                                        AAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGA       >  SRR4302543.4455024/1‑94 (MQ=60)

                                                                                        AAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGA       >  SRR4302543.3711645/1‑94 (MQ=60)

                                                                                        AAGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGA       <  SRR4302543.5390372/94‑1 (MQ=60)

                                                                                         AGCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGAT      <  SRR4302543.2036158/94‑1 (MQ=60)

                                                                                          GCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATT     <  SRR4302543.5127854/94‑1 (MQ=60)

                                                                                          GCGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATT     <  SRR4302543.386362/94‑1 (MQ=60)

                                                                                          GCGAGCAAACGCGTTTATGCTGTGTGCCCGCCCACAGGTTAATTCAGCACATTCTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATT     <  SRR4302543.386361/94‑1 (MQ=60)

                                                                                           CGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTT    >  SRR4302543.1893505/1‑94 (MQ=60)

                                                                                           CGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTT    >  SRR4302543.28730/1‑94 (MQ=60)

                                                                                           CGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTT    <  SRR4302543.6559967/94‑1 (MQ=60)

                                                                                           CGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTT    <  SRR4302543.7533273/94‑1 (MQ=60)

                                                                                           CGAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTT    <  SRR4302543.2380691/94‑1 (MQ=60)

                                                                                            GAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTG   >  SRR4302543.5348380/1‑94 (MQ=60)

                                                                                            GAGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTG   <  SRR4302543.5337318/94‑1 (MQ=60)

                                                                                             AGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGG  >  SRR4302543.5546914/1‑94 (MQ=60)

                                                                                             AGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGG  >  SRR4302543.6040728/1‑94 (MQ=60)

                                                                                             AGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGG  >  SRR4302543.4327077/1‑94 (MQ=60)

                                                                                             AGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGG  >  SRR4302543.6040729/1‑94 (MQ=60)

CAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGG  >  NC_000913/3873640‑3873826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`