Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,883,686 G→A V328I (GTT→ATT)  yidC → 60 KD inner‑membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,883,6860GA99.2% 1414.2 / ‑3.5 400V328I (GTT→ATT) yidC60 KD inner‑membrane protein
Reads supporting (aligned to +/- strand):  ref base G (0/3);  new base A (179/218);  total (179/221)
Fisher's exact test for biased strand distribution p-value = 2.56e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.03e-01

Only 100 of 409 total aligned reads displayed.

GGTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCGTTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCC  >  NC_000913/3883596‑3883775
                                                                                          |                                                                                         
 gTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTg                                                                                        >  2:4004694/1‑93 (MQ=255)
 gTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTg                                                                                        >  1:5353661/1‑93 (MQ=255)
  tCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGa                                                                                       <  2:1261384/93‑1 (MQ=255)
   cAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGAt                                                                                      <  1:7499588/93‑1 (MQ=255)
     gACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTa                                                                                    <  2:5179472/93‑1 (MQ=255)
     gACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTa                                                                                    <  2:6965736/93‑1 (MQ=255)
      aCTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTAc                                                                                   <  2:7059389/93‑1 (MQ=255)
       cTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACg                                                                                  <  2:2200436/93‑1 (MQ=255)
        tGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACgt                                                                                 >  2:2680441/1‑92 (MQ=255)
         ggCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCATCTGGATCTGACCATTGATTACggt                                                                                >  2:907478/1‑93 (MQ=255)
         ggCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACggt                                                                                >  2:3750344/1‑93 (MQ=255)
         ggCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACggt                                                                                <  2:316791/93‑1 (MQ=255)
          gcgcGATGAACAGCACCCTGTGGGTTGGCCCGGAGATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACggtt                                                                               <  1:6626562/93‑1 (MQ=255)
           cgcgATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACggttg                                                                              <  2:4129640/93‑1 (MQ=255)
             cgATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACggttggt                                                                            <  2:6490170/93‑1 (MQ=255)
              gATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACggttggtt                                                                           <  2:720242/93‑1 (MQ=255)
              gATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACggttggtt                                                                           >  2:2303198/1‑93 (MQ=255)
                tGAACAGCACCCTGTGGGTTGTCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCGTTGATTACGGTTGGTtgt                                                                         <  2:5500343/93‑1 (MQ=255)
                tGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGgttggttgg                                                                         >  1:5051041/1‑92 (MQ=255)
                tGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTtgt                                                                         <  1:7587961/93‑1 (MQ=255)
                 gAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTtgtg                                                                        >  1:5808380/1‑93 (MQ=255)
                   aCAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGt                                                                      <  2:2384822/93‑1 (MQ=255)
                     aGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGGTGTGGTTc                                                                    >  2:663972/1‑93 (MQ=255)
                      gCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCa                                                                   <  1:6123302/93‑1 (MQ=255)
                      gCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCa                                                                   <  1:6297191/93‑1 (MQ=255)
                      gCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCa                                                                   <  2:2812640/93‑1 (MQ=255)
                        aCCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCAtc                                                                 >  2:5089091/1‑93 (MQ=255)
                         cccTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCAtct                                                                >  2:7530268/1‑93 (MQ=255)
                           cTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCAtctct                                                              <  2:3894316/93‑1 (MQ=255)
                            tgtgGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCAtctctc                                                             >  1:6988392/1‑93 (MQ=255)
                            tgtgGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCAtctctc                                                             >  2:3500961/1‑93 (MQ=255)
                             gtgGGTTGGCCCGGAAATCCGGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCa                                                            >  1:165603/1‑93 (MQ=255)
                               gggTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGc                                                          <  1:6780315/93‑1 (MQ=255)
                               gggTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGc                                                          <  1:5866266/93‑1 (MQ=255)
                                ggTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGcc                                                         >  2:7878772/1‑93 (MQ=255)
                                   tGGCGCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCt                                                      <  1:7368222/93‑1 (MQ=255)
                                    ggCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTg                                                     >  1:3233760/1‑93 (MQ=255)
                                    ggCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTg                                                     >  2:164781/1‑93 (MQ=255)
                                     gCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGt                                                    <  1:7232271/93‑1 (MQ=255)
                                      cccGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGGCCATTGATTACGGTTGGTTGGGGTTCATCTCTCAGCCGCTGtt                                                   <  2:4854734/93‑1 (MQ=255)
                                       ccGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTc                                                  <  2:6780723/93‑1 (MQ=255)
                                        cGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCa                                                 >  1:1718762/1‑93 (MQ=255)
                                          gAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCaaa                                               <  1:820789/93‑1 (MQ=255)
                                          gAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCaaa                                               >  2:4641428/1‑93 (MQ=255)
                                          gAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCaaa                                               >  1:3764265/1‑93 (MQ=255)
                                             aTCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAActg                                            >  1:2082939/1‑93 (MQ=255)
                                             aTCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAActg                                            >  1:3637986/1‑93 (MQ=255)
                                             aTCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAActg                                            <  2:1018018/93‑1 (MQ=255)
                                              tCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAActgc                                           >  1:4551460/1‑93 (MQ=255)
                                                cAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAActgctg                                         >  2:1897536/1‑93 (MQ=255)
                                                 aGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGa                                        <  1:7658448/93‑1 (MQ=255)
                                                 aGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGa                                        >  1:4725762/1‑93 (MQ=255)
                                                 aGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCACCCGCTGTTCAAAATGCTGa                                        >  2:4782988/1‑93 (MQ=255)
                                                 aGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACAATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGa                                        >  1:1837552/1‑93 (MQ=255)
                                                   gACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGaaa                                      >  2:7347918/1‑93 (MQ=255)
                                                   gACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGaaa                                      >  2:298617/1‑93 (MQ=255)
                                                   gACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGaaa                                      <  2:449166/93‑1 (MQ=255)
                                                     cAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATg                                    <  1:5440589/93‑1 (MQ=255)
                                                     cAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATg                                    <  2:2080259/93‑1 (MQ=255)
                                                     cAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATg                                    <  1:6376934/93‑1 (MQ=255)
                                                      aaaaTGGCAGCTGTTTCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATgg                                   <  1:1953931/93‑1 (MQ=255)
                                                      aaaaTGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATgg                                   >  1:5379522/1‑93 (MQ=255)
                                                        aaTGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGAt                                 >  1:3414006/1‑93 (MQ=255)
                                                         aTGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATc                                >  1:3007228/1‑93 (MQ=255)
                                                          tGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATcc                               >  1:1294687/1‑93 (MQ=255)
                                                             cAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGCGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATa                            <  1:806514/93‑1 (MQ=255)
                                                              aGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAg                           <  2:6282909/93‑1 (MQ=255)
                                                              aGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAg                           >  2:2570771/1‑93 (MQ=255)
                                                               gCTGTTGCTCCGCACCTGGATCTGGCCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGc                          >  1:1377918/1‑93 (MQ=255)
                                                               gCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGc                          >  1:2800867/1‑93 (MQ=255)
                                                                cTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCt                         >  1:7343668/1‑93 (MQ=255)
                                                                cTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCt                         >  2:3648513/1‑93 (MQ=255)
                                                                  gTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCttt                       <  2:1144163/93‑1 (MQ=255)
                                                                  gTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCttt                       >  1:2519636/1‑93 (MQ=255)
                                                                  gTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCttt                       >  1:5943343/1‑93 (MQ=255)
                                                                   ttGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTtg                      >  1:7761875/1‑93 (MQ=255)
                                                                   ttGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTtg                      <  2:1529856/93‑1 (MQ=255)
                                                                    tGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTtgt                     <  2:5705138/93‑1 (MQ=255)
                                                                     gCTCCGAACCTCGCTCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTtgtg                    <  2:2462296/93‑1 (MQ=255)
                                                                       tCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTggg                  <  1:1510638/93‑1 (MQ=255)
                                                                       tCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTggg                  <  2:1957752/93‑1 (MQ=255)
                                                                          gCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTaa               >  2:337939/1‑93 (MQ=255)
                                                                            aCCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACt             >  2:5878391/1‑93 (MQ=255)
                                                                             ccTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTg            <  2:4745595/93‑1 (MQ=255)
                                                                             ccTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTg            >  1:265317/1‑93 (MQ=255)
                                                                             ccTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTg            <  1:3984707/93‑1 (MQ=255)
                                                                              cTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATCGCTTTGTGGGTAACTgg           >  1:4864142/1‑93 (MQ=255)
                                                                              cTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTgg           >  1:1193745/1‑93 (MQ=255)
                                                                              cTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTgg           <  1:2140169/93‑1 (MQ=255)
                                                                              cTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTgg           <  1:4264923/93‑1 (MQ=255)
                                                                              cTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTgg           <  2:5353660/93‑1 (MQ=255)
                                                                              cTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTgg           <  1:5617291/93‑1 (MQ=255)
                                                                              cTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTgg           <  1:6483371/93‑1 (MQ=255)
                                                                               tGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTggg          <  1:2295592/93‑1 (MQ=255)
                                                                                  aTCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCt       <  2:3048656/93‑1 (MQ=255)
                                                                                   tCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCtt      <  1:1410716/93‑1 (MQ=255)
                                                                                   tCTGACCATTGATTACGGGTGGTTGTGGGTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCtt      >  1:4403328/1‑93 (MQ=255)
                                                                                    cTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTtc     <  1:7729327/93‑1 (MQ=255)
                                                                                     tGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGTTAACTGGGGCTtct    >  1:1079091/1‑93 (MQ=255)
                                                                                     tGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTtct    >  2:6910719/1‑93 (MQ=255)
                                                                                          |                                                                                         
GGTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCGTTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCC  >  NC_000913/3883596‑3883775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 239 total aligned reads displayed.
CCTGGTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCGTTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCATTA  >  NC_000913/3883593‑3883779
                                                                                             |                                                                                             
CCTGGTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCA                                                                                               >  SRR4302543.6202729/1‑94 (MQ=60)
CCTGGTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCA                                                                                               >  SRR4302543.1780439/1‑94 (MQ=60)
 CTGGTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGGTCCGCACCTGGATCTGACCAT                                                                                              >  SRR4302543.3505714/1‑94 (MQ=60)
 CTGGTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCAT                                                                                              >  SRR4302543.3847193/1‑94 (MQ=60)
 CTGGTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCAT                                                                                              >  SRR4302543.3224192/1‑94 (MQ=60)
 CTGGTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCAT                                                                                              <  SRR4302543.5188416/94‑1 (MQ=60)
 CTGGTCAGACTGGCGCGATGAACAGCACCCTGTGGGGTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCAT                                                                                              >  SRR4302543.1667691/1‑94 (MQ=60)
  TGGTCAGTCTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATT                                                                                             >  SRR4302543.7823806/1‑94 (MQ=60)
    GTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGA                                                                                           <  SRR4302543.4143463/94‑1 (MQ=60)
    GTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGA                                                                                           >  SRR4302543.5751801/1‑94 (MQ=60)
     GCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGAT                                                                                          <  SRR4302543.2266615/94‑1 (MQ=60)
      CAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATT                                                                                         <  SRR4302543.7571306/94‑1 (MQ=60)
       AGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTA                                                                                        >  SRR4302543.4530326/1‑94 (MQ=60)
       AGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTA                                                                                        >  SRR4302543.7664561/1‑94 (MQ=60)
         ACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACG                                                                                      <  SRR4302543.7438645/94‑1 (MQ=60)
         ACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACG                                                                                      >  SRR4302543.4915879/1‑94 (MQ=60)
         ACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACG                                                                                      <  SRR4302543.6678454/94‑1 (MQ=60)
          CTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGG                                                                                     >  SRR4302543.1252160/1‑94 (MQ=60)
          CTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGG                                                                                     >  SRR4302543.778970/1‑94 (MQ=60)
          ATGGCGCGATGAACCGCAACCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGG                                                                                     <  SRR4302543.5061029/94‑1 (MQ=60)
           TGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGT                                                                                    <  SRR4302543.1895910/94‑1 (MQ=60)
            GGCGCGATGAACATCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTT                                                                                   >  SRR4302543.2884540/1‑94 (MQ=60)
             GCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAGATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTG                                                                                  <  SRR4302543.6689056/94‑1 (MQ=60)
             GCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTG                                                                                  <  SRR4302543.3268444/94‑1 (MQ=60)
             GCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTG                                                                                  <  SRR4302543.739063/94‑1 (MQ=60)
              CGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGG                                                                                 <  SRR4302543.1160954/94‑1 (MQ=60)
              CGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGG                                                                                 <  SRR4302543.6900270/94‑1 (MQ=60)
              CGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGG                                                                                 <  SRR4302543.4417224/94‑1 (MQ=60)
               GCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGT                                                                                >  SRR4302543.6657364/1‑94 (MQ=60)
               GCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGT                                                                                <  SRR4302543.6813997/94‑1 (MQ=60)
               GCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGT                                                                                <  SRR4302543.1656196/94‑1 (MQ=60)
                CGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTT                                                                               <  SRR4302543.1327118/94‑1 (MQ=60)
                  ATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGcgtggttag                                                                             >  SRR4302543.452683/1‑85 (MQ=60)
                  ATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGT                                                                             <  SRR4302543.3697556/94‑1 (MQ=60)
                   TGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTG                                                                            <  SRR4302543.6363249/94‑1 (MQ=60)
                   TGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTG                                                                            <  SRR4302543.7660064/94‑1 (MQ=60)
                   TGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTG                                                                            >  SRR4302543.5861206/1‑94 (MQ=60)
                   TGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTG                                                                            >  SRR4302543.5861011/1‑94 (MQ=60)
                   TGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTG                                                                            <  SRR4302543.1566715/94‑1 (MQ=60)
                    GAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGG                                                                           >  SRR4302543.2145846/1‑94 (MQ=60)
                      ACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTT                                                                         >  SRR4302543.2632866/1‑94 (MQ=60)
                        AGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCA                                                                       >  SRR4302543.1351931/1‑94 (MQ=60)
                        AGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCA                                                                       <  SRR4302543.2089050/94‑1 (MQ=60)
                        AGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCA                                                                       >  SRR4302543.1351932/1‑94 (MQ=60)
                         GCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCAT                                                                      <  SRR4302543.6356459/94‑1 (MQ=60)
                         GCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCAT                                                                      <  SRR4302543.6181295/94‑1 (MQ=60)
                          CACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATT                                                                     >  SRR4302543.5472197/1‑94 (MQ=60)
                          CACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATC                                                                     <  SRR4302543.2757997/94‑1 (MQ=60)
                          CACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATC                                                                     >  SRR4302543.4904660/1‑94 (MQ=60)
                           CCCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCT                                                                    <  SRR4302543.6251504/94‑1 (MQ=60)
                             CCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCT                                                                  <  SRR4302543.7734931/94‑1 (MQ=60)
                              CTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTC                                                                 >  SRR4302543.5405274/1‑94 (MQ=60)
                              CTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTC                                                                 >  SRR4302543.5924695/1‑94 (MQ=60)
                              CTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTC                                                                 >  SRR4302543.7054161/1‑94 (MQ=60)
                               TGTGGGTTGGCCCGGAAATCCGGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCA                                                                >  SRR4302543.167031/1‑94 (MQ=60)
                               TGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCA                                                                <  SRR4302543.7443689/94‑1 (MQ=60)
                                GTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAG                                                               <  SRR4302543.1932745/94‑1 (MQ=60)
                                GTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAG                                                               <  SRR4302543.7513677/94‑1 (MQ=60)
                                GTGGGTTGGCCCGGAAAGCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAG                                                               <  SRR4302543.7831295/94‑1 (MQ=60)
                                 TGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGC                                                              >  SRR4302543.1974931/1‑94 (MQ=60)
                                 TGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGC                                                              <  SRR4302543.1677731/94‑1 (MQ=60)
                                  GGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCC                                                             <  SRR4302543.4878123/94‑1 (MQ=60)
                                  GGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCC                                                             <  SRR4302543.5919666/94‑1 (MQ=60)
                                  GGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCC                                                             <  SRR4302543.6844343/94‑1 (MQ=60)
                                   GGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCG                                                            <  SRR4302543.3248746/94‑1 (MQ=60)
                                     TTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCT                                                          <  SRR4302543.179099/94‑1 (MQ=60)
                                     TTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCG                                                          >  SRR4302543.6057001/1‑94 (MQ=60)
                                      TGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTG                                                         >  SRR4302543.3263012/1‑94 (MQ=60)
                                      TGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTG                                                         <  SRR4302543.6156204/94‑1 (MQ=60)
                                       GGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGT                                                        >  SRR4302543.2644736/1‑94 (MQ=60)
                                        GCCCGTAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTT                                                       <  SRR4302543.3963891/94‑1 (MQ=60)
                                        GCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTT                                                       <  SRR4302543.7302311/94‑1 (MQ=60)
                                         CCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTC                                                      >  SRR4302543.3209973/1‑94 (MQ=60)
                                         CCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTC                                                      >  SRR4302543.6238248/1‑94 (MQ=60)
                                         CCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTC                                                      >  SRR4302543.5637084/1‑94 (MQ=60)
                                          CCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCA                                                     >  SRR4302543.1734109/1‑94 (MQ=60)
                                          CCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCA                                                     <  SRR4302543.2361375/94‑1 (MQ=60)
                                           CGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAA                                                    <  SRR4302543.2503350/94‑1 (MQ=60)
                                           CGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAA                                                    >  SRR4302543.3871709/1‑94 (MQ=60)
                                            GGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAA                                                   >  SRR4302543.3776350/1‑94 (MQ=60)
                                            GGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAA                                                   >  SRR4302543.3797395/1‑94 (MQ=60)
                                            GGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGGTGGTTGGGGATCATCTCTCAGCCGCTGTTCAAA                                                   >  SRR4302543.5931972/1‑94 (MQ=60)
                                             GAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTTGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAAC                                                  <  SRR4302543.1715091/94‑1 (MQ=60)
                                             GAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAAC                                                  <  SRR4302543.828016/94‑1 (MQ=60)
                                             GAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTAATCTCTCAGCCGCTGTTCAAAC                                                  <  SRR4302543.1397716/94‑1 (MQ=60)
                                              AAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACT                                                 <  SRR4302543.964959/94‑1 (MQ=60)
                                              AAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACT                                                 <  SRR4302543.4124129/94‑1 (MQ=60)
                                              AAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACT                                                 <  SRR4302543.7176126/94‑1 (MQ=60)
                                              AAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGCTGTGGGTCATCTCTCAGCCGCTGTTCAAACT                                                 >  SRR4302543.2984328/1‑94 (MQ=60)
                                               AATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTG                                                >  SRR4302543.2101539/1‑94 (MQ=60)
                                               AATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTG                                                >  SRR4302543.3670004/1‑94 (MQ=60)
                                                ATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGC                                               >  SRR4302543.21996/1‑94 (MQ=60)
                                                ATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGC                                               >  SRR4302543.4592909/1‑94 (MQ=60)
                                                 TCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCT                                              <  SRR4302543.2313080/94‑1 (MQ=60)
                                                 TCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCT                                              <  SRR4302543.707651/94‑1 (MQ=60)
                                                 TCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCT                                              <  SRR4302543.5402836/94‑1 (MQ=60)
                                                 TCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCT                                              >  SRR4302543.5205529/1‑94 (MQ=60)
                                                   CAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGA                                            >  SRR4302543.996454/1‑94 (MQ=60)
                                                   CAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGA                                            >  SRR4302543.4768942/1‑94 (MQ=60)
                                                   CAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGA                                            <  SRR4302543.5989223/94‑1 (MQ=60)
                                                   CAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACAATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGA                                            >  SRR4302543.1854081/1‑94 (MQ=60)
                                                    AGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAA                                           <  SRR4302543.2140781/94‑1 (MQ=60)
                                                    AGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAA                                           >  SRR4302543.2124091/1‑94 (MQ=60)
                                                    AGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAA                                           <  SRR4302543.7731045/94‑1 (MQ=60)
                                                    AGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAA                                           <  SRR4302543.3864815/94‑1 (MQ=60)
                                                      GACAAAGTGGCAGCTGTTGCTCAGCACCTGAATCTGACCATTGATTGCGGTTGGTTGTGGTGCAGCTCTCAGCCGCTGTTCAAACTGCTGAAAT                                         <  SRR4302543.7880717/94‑1 (MQ=60)
                                                      GACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAAT                                         <  SRR4302543.3049843/94‑1 (MQ=60)
                                                      GACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAAT                                         <  SRR4302543.7701237/94‑1 (MQ=60)
                                                      GAAAAAAGGGCAGCTGTGGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAAT                                         <  SRR4302543.6929860/94‑1 (MQ=60)
                                                       ACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATG                                        <  SRR4302543.295123/94‑1 (MQ=60)
                                                        CAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGG                                       <  SRR4302543.5923250/94‑1 (MQ=60)
                                                        CAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGG                                       >  SRR4302543.4929660/1‑94 (MQ=60)
                                                        CAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGG                                       >  SRR4302543.1209325/1‑94 (MQ=60)
                                                        CAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGG                                       >  SRR4302543.5428303/1‑94 (MQ=60)
                                                        CAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGG                                       <  SRR4302543.6436934/94‑1 (MQ=60)
                                                        CAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGG                                       <  SRR4302543.6436933/94‑1 (MQ=60)
                                                        CAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGG                                       <  SRR4302543.5489979/94‑1 (MQ=60)
                                                        CAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGG                                       <  SRR4302543.5651966/94‑1 (MQ=60)
                                                        CAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGGGGGTTGTGGTTCATATCTCAGCCGCCGTTCATACTGGTGAAATTG                                       >  SRR4302543.5243014/1‑94 (MQ=60)
                                                         AAAATGGCAGCTGTTTCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGA                                      <  SRR4302543.1971458/94‑1 (MQ=60)
                                                          AAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGAT                                     >  SRR4302543.3444570/1‑94 (MQ=60)
                                                          AAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGAT                                     >  SRR4302543.1132806/1‑94 (MQ=60)
                                                          AAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGAT                                     <  SRR4302543.1772805/94‑1 (MQ=60)
                                                           AATGGCAGCTGTTGCTCCGCGCCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATC                                    <  SRR4302543.4743021/94‑1 (MQ=60)
                                                           AATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGACATGGATC                                    >  SRR4302543.825722/1‑94 (MQ=60)
                                                           AATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATC                                    >  SRR4302543.3034469/1‑94 (MQ=60)
                                                           AATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATC                                    >  SRR4302543.825721/1‑94 (MQ=60)
                                                           AATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATC                                    <  SRR4302543.4743019/94‑1 (MQ=60)
                                                            ATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCC                                   >  SRR4302543.1306208/1‑94 (MQ=60)
                                                            ATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCC                                   >  SRR4302543.141322/1‑94 (MQ=60)
                                                            ATGGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCC                                   <  SRR4302543.5108505/94‑1 (MQ=60)
                                                              GGCAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCAT                                 <  SRR4302543.7635814/94‑1 (MQ=60)
                                                                CAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAG                               <  SRR4302543.2693362/94‑1 (MQ=60)
                                                                CAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGCGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAG                               <  SRR4302543.813615/94‑1 (MQ=60)
                                                                CAGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGCAGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAG                               <  SRR4302543.813616/94‑1 (MQ=60)
                                                                 AGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATGTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGC                              <  SRR4302543.7431357/94‑1 (MQ=60)
                                                                 AGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGC                              >  SRR4302543.3469330/1‑94 (MQ=60)
                                                                 AGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGC                              >  SRR4302543.140320/1‑94 (MQ=60)
                                                                 AGCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGC                              >  SRR4302543.2826479/1‑94 (MQ=60)
                                                                  GCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCT                             <  SRR4302543.7175193/94‑1 (MQ=60)
                                                                  GCTGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCT                             >  SRR4302543.7414320/1‑94 (MQ=60)
                                                                    TGTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTT                           >  SRR4302543.2542536/1‑94 (MQ=60)
                                                                     GTTGCTCCGCACCTGGATCTGACCATTGATTACTGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTG                          <  SRR4302543.6074364/94‑1 (MQ=60)
                                                                     GTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTG                          >  SRR4302543.3302786/1‑94 (MQ=60)
                                                                     GTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTG                          >  SRR4302543.7835126/1‑94 (MQ=60)
                                                                     GTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTG                          >  SRR4302543.2806367/1‑94 (MQ=60)
                                                                     GTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTG                          <  SRR4302543.1490135/94‑1 (MQ=60)
                                                                     GTTGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTG                          <  SRR4302543.5423234/94‑1 (MQ=60)
                                                                       TGCTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTG                        >  SRR4302543.6280172/1‑94 (MQ=60)
                                                                        GCTCCGCACCTGGATCTGACCGTTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGG                       <  SRR4302543.5434822/94‑1 (MQ=60)
                                                                         CTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGG                      <  SRR4302543.4395966/94‑1 (MQ=60)
                                                                         CTCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGG                      <  SRR4302543.4164411/94‑1 (MQ=60)
                                                                          TCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGT                     <  SRR4302543.1524202/94‑1 (MQ=60)
                                                                          TCCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGT                     <  SRR4302543.7624858/94‑1 (MQ=60)
                                                                           CCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTA                    >  SRR4302543.349277/1‑94 (MQ=60)
                                                                           CCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTA                    >  SRR4302543.7843469/1‑94 (MQ=60)
                                                                           CCGCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTA                    >  SRR4302543.4828343/1‑94 (MQ=60)
                                                                             GCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAAC                  <  SRR4302543.7792619/94‑1 (MQ=60)
                                                                             GCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAAC                  >  SRR4302543.1121477/1‑94 (MQ=60)
                                                                             GCACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAAC                  <  SRR4302543.2666247/94‑1 (MQ=60)
                                                                              CACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACT                 >  SRR4302543.7303555/1‑94 (MQ=60)
                                                                              CACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACT                 >  SRR4302543.5865201/1‑94 (MQ=60)
                                                                               ACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTG                <  SRR4302543.3706285/94‑1 (MQ=60)
                                                                               ACCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTG                <  SRR4302543.7477090/94‑1 (MQ=60)
                                                                                CCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATCGCTTTGTGGGTAACTGG               >  SRR4302543.4908484/1‑94 (MQ=60)
                                                                                CCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGG               <  SRR4302543.586496/94‑1 (MQ=60)
                                                                                CCTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGG               >  SRR4302543.1204511/1‑94 (MQ=60)
                                                                                 CTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGG              <  SRR4302543.2159322/94‑1 (MQ=60)
                                                                                 CTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGG              <  SRR4302543.4303660/94‑1 (MQ=60)
                                                                                 CTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGG              <  SRR4302543.566427/94‑1 (MQ=60)
                                                                                 CTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGG              <  SRR4302543.5668479/94‑1 (MQ=60)
                                                                                 CTGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGG              <  SRR4302543.6544460/94‑1 (MQ=60)
                                                                                  TGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGG             <  SRR4302543.2316528/94‑1 (MQ=60)
                                                                                  TGGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGG             <  SRR4302543.6611622/94‑1 (MQ=60)
                                                                                   GGATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGC            <  SRR4302543.6424713/94‑1 (MQ=60)
                                                                                    GATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCT           >  SRR4302543.7485512/1‑94 (MQ=60)
                                                                                    GATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCT           <  SRR4302543.4353637/94‑1 (MQ=60)
                                                                                     CTCTGACCATTGATTACGGGTGGTTGTGGGTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTT          >  SRR4302543.4443244/1‑94 (MQ=60)
                                                                                     ATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTT          >  SRR4302543.4443245/1‑94 (MQ=60)
                                                                                     ATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTT          <  SRR4302543.1777794/94‑1 (MQ=60)
                                                                                     ATCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTT          >  SRR4302543.5243565/1‑94 (MQ=60)
                                                                                      TCTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTC         <  SRR4302543.1423465/94‑1 (MQ=60)
                                                                                      TCTGACCAGTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTC         <  SRR4302543.1423468/94‑1 (MQ=60)
                                                                                       CTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGTTAACTGGGGCTTCT        >  SRR4302543.1088792/1‑94 (MQ=60)
                                                                                       CTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCT        <  SRR4302543.7418603/94‑1 (MQ=60)
                                                                                       CTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCT        <  SRR4302543.7802382/94‑1 (MQ=60)
                                                                                       CTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCT        <  SRR4302543.6794760/94‑1 (MQ=60)
                                                                                       CTGACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCT        <  SRR4302543.6534030/94‑1 (MQ=60)
                                                                                          ACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCA     >  SRR4302543.2058992/1‑94 (MQ=60)
                                                                                          ACCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCA     >  SRR4302543.6492672/1‑94 (MQ=60)
                                                                                           CCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCAT    <  SRR4302543.4040430/94‑1 (MQ=60)
                                                                                           CCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCAT    >  SRR4302543.3117709/1‑94 (MQ=60)
                                                                                           CCATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCAT    >  SRR4302543.1497911/1‑94 (MQ=60)
                                                                                           CCATTAATTACGGTGGGTTGTGGTTCAACTCCCAGCCGCTGTTCAAACTGCTGAAATCGATCCATCGCTTTGTGGGTAACTGGGGCTTCTCCAC    <  SRR4302543.4040431/94‑1 (MQ=60)
                                                                                            CATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCATT   >  SRR4302543.3999367/1‑94 (MQ=60)
                                                                                            CATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCATT   >  SRR4302543.859212/1‑94 (MQ=60)
                                                                                            CATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCATT   >  SRR4302543.859213/1‑94 (MQ=60)
                                                                                             ATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCATTA  >  SRR4302543.4417711/1‑94 (MQ=60)
                                                                                             ATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCATTA  >  SRR4302543.3847457/1‑94 (MQ=60)
                                                                                             ATTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCATTA  >  SRR4302543.991891/1‑94 (MQ=60)
                                                                                             |                                                                                             
CCTGGTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCGTTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCATTA  >  NC_000913/3883593‑3883779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑