Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,892,505 T→C G75G (GGT→GGC)  yieF → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,892,5050TC99.8% 1295.0 / ‑6.3 415G75G (GGT→GGC) yieFhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (193/221);  total (194/221)
Fisher's exact test for biased strand distribution p-value = 4.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 447 total aligned reads displayed.

CATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACC  >  NC_000913/3892415‑3892594
                                                                                          |                                                                                         
cATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGgcgt                                                                                         >  2:6405130/1‑93 (MQ=255)
cATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGgcgt                                                                                         >  2:2982509/1‑93 (MQ=255)
  ttCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCgtgg                                                                                       <  1:5775026/93‑1 (MQ=255)
  ttCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCgtgg                                                                                       >  2:4735894/1‑93 (MQ=255)
  ttCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGAGGAACAGATCCGTCATGCTGACGGTgtgg                                                                                       >  1:481725/1‑93 (MQ=255)
   tCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCgtggt                                                                                      <  2:7406460/93‑1 (MQ=255)
      cTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGAt                                                                                   <  1:3826042/93‑1 (MQ=255)
      cTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGAt                                                                                   <  1:2353408/93‑1 (MQ=255)
       ttGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATc                                                                                  >  1:7652644/1‑93 (MQ=255)
        tGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCg                                                                                 <  2:1172765/93‑1 (MQ=255)
           aTGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCa                                                                              >  2:7931503/1‑93 (MQ=255)
           aTGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCa                                                                              <  2:2586740/93‑1 (MQ=255)
            tGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCAc                                                                             >  1:7817824/1‑93 (MQ=255)
            tGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCAc                                                                             <  2:5400477/93‑1 (MQ=255)
                gCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCg                                                                         <  2:2509378/93‑1 (MQ=255)
                gCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCg                                                                         <  2:4348110/93‑1 (MQ=255)
                  tGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGa                                                                       >  1:6129407/1‑93 (MQ=255)
                  tGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTCGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGa                                                                       >  1:5974195/1‑93 (MQ=255)
                   gACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGaa                                                                      <  2:1013489/93‑1 (MQ=255)
                   gACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGaa                                                                      >  1:3240264/1‑93 (MQ=255)
                     cGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAata                                                                    <  1:7743220/93‑1 (MQ=255)
                     cGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAata                                                                    <  2:4141046/93‑1 (MQ=255)
                     cGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAata                                                                    <  1:1069696/93‑1 (MQ=255)
                       tACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAAtata                                                                  >  2:6941860/1‑93 (MQ=255)
                        aCAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATaa                                                                 >  1:4444691/1‑93 (MQ=255)
                        aCAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATaa                                                                 <  2:1853634/93‑1 (MQ=255)
                         cagcagGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGACTATAac                                                                >  1:685485/1‑93 (MQ=255)
                         cagcagGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAac                                                                >  2:2686904/1‑93 (MQ=255)
                          agcagGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAact                                                               >  2:2453617/1‑93 (MQ=255)
                           gcagGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAactc                                                              >  1:6282625/1‑92 (MQ=255)
                           gcagGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAacta                                                              >  2:3398488/1‑93 (MQ=255)
                             agGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAactact                                                            >  2:1577251/1‑93 (MQ=255)
                              ggAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTc                                                           <  2:1498072/93‑1 (MQ=255)
                              ggAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTc                                                           >  2:6010240/1‑93 (MQ=255)
                              ggAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTc                                                           >  2:6780255/1‑93 (MQ=255)
                               gaagaaGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAAATACTCg                                                          >  2:1377021/1‑93 (MQ=255)
                                 agaagGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGCCGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGt                                                        >  2:2090192/1‑93 (MQ=255)
                                 agaagGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGt                                                        >  1:3415586/1‑93 (MQ=255)
                                 agaagGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGt                                                        >  1:3300121/1‑93 (MQ=255)
                                  gaagGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTa                                                       <  1:24195/93‑1 (MQ=255)
                                      gTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCgg                                                   >  2:5934644/1‑93 (MQ=255)
                                       ttttCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGCACCggg                                                  >  1:477939/1‑93 (MQ=255)
                                        ttgccAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGt                                                 <  1:6463405/90‑1 (MQ=255)
                                           ccAGCAACGGTTGAAGCTCTGGCTGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTggg                                              <  2:4290018/93‑1 (MQ=255)
                                            cAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGc                                             <  2:3121438/93‑1 (MQ=255)
                                            cAGCAACGGTTGAAGCTCTGGCGGAACAGATCCATCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGc                                             <  1:7160176/93‑1 (MQ=255)
                                             aGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGCGATCGTCACGCCGGAATATAACTACTTGGTACCGGGTGGGCt                                            >  2:171362/1‑93 (MQ=255)
                                              gCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTg                                           <  1:5121022/93‑1 (MQ=255)
                                                   ggTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGaaaaa                                      <  1:1166861/93‑1 (MQ=255)
                                                    gTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAAt                                     <  1:209607/93‑1 (MQ=255)
                                                    gTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAAt                                     >  2:3888593/1‑93 (MQ=255)
                                                    gTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAAt                                     >  1:2888429/1‑93 (MQ=255)
                                                    gTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAAt                                     >  2:7481249/1‑93 (MQ=255)
                                                    gTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAAt                                     >  1:4093586/1‑93 (MQ=255)
                                                    gTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAAt                                     >  1:3935906/1‑93 (MQ=255)
                                                     ttGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATg                                    >  2:4781319/1‑93 (MQ=255)
                                                      tGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGc                                   <  1:4186864/93‑1 (MQ=255)
                                                      tGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGc                                   >  2:7339541/1‑93 (MQ=255)
                                                       gAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGcc                                  >  1:7418043/1‑93 (MQ=255)
                                                        aaGCTCTGTGGGAACAGATTCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCa                                 <  1:5886893/93‑1 (MQ=255)
                                                        aaGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCa                                 <  2:4008/93‑1 (MQ=255)
                                                        aaGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCa                                 <  1:2524829/93‑1 (MQ=255)
                                                        aaGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCa                                 >  2:2627252/1‑93 (MQ=255)
                                                         aGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCAt                                <  2:6113429/93‑1 (MQ=255)
                                                          gCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATc                               <  2:5143864/93‑1 (MQ=255)
                                                          gCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATc                               <  2:6461815/93‑1 (MQ=255)
                                                          gCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATc                               <  1:3051670/93‑1 (MQ=255)
                                                          gCTCTGGCAGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGAAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATc                               <  2:6674747/93‑1 (MQ=255)
                                                           ctctGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCg                              <  1:7128378/93‑1 (MQ=255)
                                                           ctctGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCg                              <  1:837875/93‑1 (MQ=255)
                                                            tctGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGa                             >  1:4374385/1‑93 (MQ=255)
                                                            tctGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGa                             <  1:5249186/93‑1 (MQ=255)
                                                            cctGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGa                             <  1:2621849/92‑1 (MQ=255)
                                                             ctGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGAc                            <  2:7831187/93‑1 (MQ=255)
                                                              tGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACt                           <  2:3258859/93‑1 (MQ=255)
                                                              tGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACt                           <  1:1926824/93‑1 (MQ=255)
                                                              tGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACt                           >  1:7528466/1‑93 (MQ=255)
                                                              tGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACt                           <  1:4608984/93‑1 (MQ=255)
                                                                gCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTgg                         >  1:3708628/1‑93 (MQ=255)
                                                                 cGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGc                        <  1:1407000/93‑1 (MQ=255)
                                                                  ggAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCt                       <  2:5490482/93‑1 (MQ=255)
                                                                   gAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCtt                      >  2:4927666/1‑93 (MQ=255)
                                                                    aaCAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCttt                     >  2:7604939/1‑93 (MQ=255)
                                                                     aCAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTc                    >  1:1771562/1‑93 (MQ=255)
                                                                      cAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTcc                   <  1:6359045/93‑1 (MQ=255)
                                                                      cAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTcc                   <  2:6277773/93‑1 (MQ=255)
                                                                         aTCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGc                >  2:2840218/1‑93 (MQ=255)
                                                                          tCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGcc               >  1:1002706/1‑93 (MQ=255)
                                                                          tCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGcc               <  2:349822/93‑1 (MQ=255)
                                                                               cAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCg          <  1:1632358/93‑1 (MQ=255)
                                                                                aGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCgg         <  2:22836/93‑1 (MQ=255)
                                                                                 ggCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGa        >  2:373896/1‑93 (MQ=255)
                                                                                  gCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGAt       >  1:4918605/1‑93 (MQ=255)
                                                                                   cTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATc      <  2:5771394/93‑1 (MQ=255)
                                                                                    tGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCa     >  1:6551839/1‑93 (MQ=255)
                                                                                     gACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCaa    <  1:6687258/93‑1 (MQ=255)
                                                                                     gACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCaa    <  2:7734086/93‑1 (MQ=255)
                                                                                      aCGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAAc   <  1:3657690/93‑1 (MQ=255)
                                                                                      aCGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAAc   >  1:5486523/1‑93 (MQ=255)
                                                                                       cGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAAcc  >  1:1529792/1‑93 (MQ=255)
                                                                                          |                                                                                         
CATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACC  >  NC_000913/3892415‑3892594

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 238 total aligned reads displayed.
GACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTG  >  NC_000913/3892413‑3892598
                                                                                            |                                                                                             
GACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCG                                                                                              >  SRR4302543.6281921/1‑94 (MQ=60)
GACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCG                                                                                              <  SRR4302543.838922/94‑1 (MQ=60)
GACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCG                                                                                              >  SRR4302543.3565132/1‑94 (MQ=60)
GACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCG                                                                                              <  SRR4302543.7041267/94‑1 (MQ=60)
 ACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGT                                                                                             >  SRR4302543.3359610/1‑94 (MQ=60)
  CATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTG                                                                                            >  SRR4302543.3797262/1‑94 (MQ=60)
   ATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGG                                                                                           >  SRR4302543.5770084/1‑94 (MQ=60)
   ATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGG                                                                                           >  SRR4302543.486174/1‑94 (MQ=60)
   ATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGG                                                                                           >  SRR4302543.406150/1‑94 (MQ=60)
   ATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGG                                                                                           >  SRR4302543.1892754/1‑94 (MQ=60)
   ATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGG                                                                                           >  SRR4302543.1072811/1‑94 (MQ=60)
   ATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGAGGAACAGATCCGTCATGCTGACGGTGTGG                                                                                           >  SRR4302543.486175/1‑94 (MQ=60)
    TTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGT                                                                                          <  SRR4302543.7272832/94‑1 (MQ=60)
    TTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGT                                                                                          >  SRR4302543.1880706/1‑94 (MQ=60)
    TTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGT                                                                                          <  SRR4302543.4015148/94‑1 (MQ=60)
      CCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGA                                                                                        >  SRR4302543.7405724/1‑94 (MQ=60)
      CCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGA                                                                                        >  SRR4302543.7954297/1‑94 (MQ=60)
      CCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGA                                                                                        >  SRR4302543.3710671/1‑94 (MQ=60)
       CCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGAT                                                                                       <  SRR4302543.5143759/94‑1 (MQ=60)
       CCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGAT                                                                                       <  SRR4302543.3187704/94‑1 (MQ=60)
        CTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATG                                                                                      >  SRR4302543.3021018/1‑94 (MQ=60)
        CTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATC                                                                                      >  SRR4302543.4634944/1‑94 (MQ=60)
        CTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATC                                                                                      <  SRR4302543.7522989/94‑1 (MQ=60)
        CTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATC                                                                                      <  SRR4302543.3859790/94‑1 (MQ=60)
        CTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATC                                                                                      <  SRR4302543.6533418/94‑1 (MQ=60)
        CTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATC                                                                                      >  SRR4302543.7725201/1‑94 (MQ=60)
        CTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATC                                                                                      <  SRR4302543.2374752/94‑1 (MQ=60)
         TTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCG                                                                                     <  SRR4302543.4841806/94‑1 (MQ=60)
         TTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGAGTGGAGATCC                                                                                     >  SRR4302543.7515944/1‑94 (MQ=60)
          TGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGT                                                                                    >  SRR4302543.7414626/1‑94 (MQ=60)
             ATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCAC                                                                                 <  SRR4302543.1161485/94‑1 (MQ=60)
             ATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCAC                                                                                 >  SRR4302543.3182836/1‑94 (MQ=60)
             ATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCAC                                                                                 >  SRR4302543.780637/1‑94 (MQ=60)
             ATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCAC                                                                                 <  SRR4302543.5320636/94‑1 (MQ=60)
             ATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCAC                                                                                 >  SRR4302543.5963503/1‑94 (MQ=60)
             ATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCAC                                                                                 >  SRR4302543.7891483/1‑94 (MQ=60)
             ATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCAC                                                                                 <  SRR4302543.2436751/94‑1 (MQ=60)
             ATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCCCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCAC                                                                                 >  SRR4302543.7215846/1‑94 (MQ=60)
              TGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACG                                                                                <  SRR4302543.6676972/94‑1 (MQ=60)
               GACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGC                                                                               >  SRR4302543.492892/1‑94 (MQ=60)
               GACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGC                                                                               >  SRR4302543.6829514/1‑94 (MQ=60)
               GACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGC                                                                               >  SRR4302543.1808939/1‑94 (MQ=60)
                ACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCC                                                                              >  SRR4302543.1013573/1‑94 (MQ=60)
                 CGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCAGGCCG                                                                             >  SRR4302543.6226389/1‑94 (MQ=60)
                 CGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCG                                                                             <  SRR4302543.4711335/94‑1 (MQ=60)
                 CGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCG                                                                             >  SRR4302543.3321239/1‑94 (MQ=60)
                 CGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCG                                                                             <  SRR4302543.1518279/94‑1 (MQ=60)
                  GCTGACGTGCAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGG                                                                            <  SRR4302543.2096805/94‑1 (MQ=60)
                   CTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGA                                                                           >  SRR4302543.6187463/1‑94 (MQ=60)
                   CTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGA                                                                           <  SRR4302543.417756/94‑1 (MQ=60)
                   CTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGA                                                                           <  SRR4302543.6216921/94‑1 (MQ=60)
                   CTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTCGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGA                                                                           >  SRR4302543.6028917/1‑94 (MQ=60)
                    TGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAA                                                                          <  SRR4302543.3013771/94‑1 (MQ=60)
                     GACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAAT                                                                         <  SRR4302543.1591130/94‑1 (MQ=60)
                     GACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAAT                                                                         <  SRR4302543.7849712/94‑1 (MQ=60)
                     GACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAAT                                                                         <  SRR4302543.5815862/94‑1 (MQ=60)
                     GACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAAT                                                                         >  SRR4302543.3801845/1‑94 (MQ=60)
                     GACGTACAGCAGGAAGAAGGTTTTCCACCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAAT                                                                         <  SRR4302543.3873091/94‑1 (MQ=60)
                      ACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATA                                                                        >  SRR4302543.4932335/1‑94 (MQ=60)
                       CGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATAT                                                                       <  SRR4302543.1079312/94‑1 (MQ=60)
                       CGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATAT                                                                       <  SRR4302543.7816360/94‑1 (MQ=60)
                       CGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATAGTCACGCCGGAATAT                                                                       >  SRR4302543.2390791/1‑94 (MQ=60)
                        GTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATA                                                                      <  SRR4302543.244766/94‑1 (MQ=60)
                         TACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAA                                                                     <  SRR4302543.6653953/94‑1 (MQ=60)
                         TACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAA                                                                     >  SRR4302543.4484945/1‑94 (MQ=60)
                         TACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAA                                                                     <  SRR4302543.4428908/94‑1 (MQ=60)
                         TACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAA                                                                     <  SRR4302543.2374455/94‑1 (MQ=60)
                          ACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGACTATAAC                                                                    >  SRR4302543.691799/1‑94 (MQ=60)
                          ACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAAC                                                                    <  SRR4302543.1233031/94‑1 (MQ=60)
                           CAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACT                                                                   <  SRR4302543.1570680/94‑1 (MQ=60)
                            AGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACTGCGTGGTGATCGTCACGCCGGAATATAACTA                                                                  >  SRR4302543.7180970/1‑94 (MQ=60)
                            AGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTA                                                                  <  SRR4302543.7630457/94‑1 (MQ=60)
                            AGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTA                                                                  >  SRR4302543.786359/1‑94 (MQ=60)
                            AGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGACCCGTCAGGCTGACGGCGGGGTGATCGTCACGCCGGAATATAACTA                                                                  >  SRR4302543.4614247/1‑94 (MQ=60)
                              CAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACT                                                                <  SRR4302543.2468692/94‑1 (MQ=60)
                              CAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACT                                                                <  SRR4302543.4311074/94‑1 (MQ=60)
                              CAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACT                                                                <  SRR4302543.1492459/94‑1 (MQ=60)
                              CAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGCAATATAACTACT                                                                >  SRR4302543.5735196/1‑94 (MQ=60)
                              CAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGCTGATCGTCACGCCGGAATATAACTATT                                                                >  SRR4302543.1987723/1‑94 (MQ=60)
                               AGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCTGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTC                                                               <  SRR4302543.4250209/94‑1 (MQ=60)
                               AGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTG                                                               >  SRR4302543.6121494/1‑94 (MQ=60)
                               AGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTC                                                               >  SRR4302543.3999526/1‑94 (MQ=60)
                                GGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCG                                                              <  SRR4302543.4660678/94‑1 (MQ=60)
                                GGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCG                                                              >  SRR4302543.6877314/1‑94 (MQ=60)
                                  AAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGT                                                            >  SRR4302543.6010231/1‑94 (MQ=60)
                                  AAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGT                                                            >  SRR4302543.3329902/1‑94 (MQ=60)
                                  AAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGT                                                            >  SRR4302543.6458441/1‑94 (MQ=60)
                                  AAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGT                                                            >  SRR4302543.3446159/1‑94 (MQ=60)
                                   AGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTA                                                           >  SRR4302543.2665167/1‑94 (MQ=60)
                                   AGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTA                                                           >  SRR4302543.3458908/1‑94 (MQ=60)
                                    GAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTAC                                                          <  SRR4302543.24413/94‑1 (MQ=60)
                                    GAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTAC                                                          <  SRR4302543.6411298/94‑1 (MQ=60)
                                     AAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACC                                                         <  SRR4302543.2249848/94‑1 (MQ=60)
                                      AGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCG                                                        <  SRR4302543.6237028/94‑1 (MQ=60)
                                       GGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGG                                                       <  SRR4302543.2597933/94‑1 (MQ=60)
                                        GTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGG                                                      >  SRR4302543.7806010/1‑94 (MQ=60)
                                        GTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGG                                                      <  SRR4302543.6485609/94‑1 (MQ=60)
                                        GTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGG                                                      <  SRR4302543.5378747/94‑1 (MQ=60)
                                        GTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGCACCGGG                                                      >  SRR4302543.482356/1‑94 (MQ=60)
                                        GTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGCACCGCCGGAATATCCCTACCCGGAACCGGG                                                      >  SRR4302543.6135165/1‑94 (MQ=60)
                                         TTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAAGTACTCGGAACCGGGA                                                     >  SRR4302543.7618022/1‑94 (MQ=60)
                                          TTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTG                                                    <  SRR4302543.2896080/94‑1 (MQ=60)
                                          TTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTG                                                    <  SRR4302543.6524304/94‑1 (MQ=60)
                                          TTGCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTG                                                    <  SRR4302543.6524303/94‑1 (MQ=60)
                                           TTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGG                                                   <  SRR4302543.897204/94‑1 (MQ=60)
                                           TTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGG                                                   <  SRR4302543.2118285/94‑1 (MQ=60)
                                           TTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGG                                                   <  SRR4302543.1228318/94‑1 (MQ=60)
                                           TTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGG                                                   <  SRR4302543.4968928/94‑1 (MQ=60)
                                              CAGCAACGGTTGAAGCTCTGGCGGAACAGATCCATCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCT                                                <  SRR4302543.7229748/94‑1 (MQ=60)
                                               AGCAACGGTTGAAGCCCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTG                                               <  SRR4302543.7027918/94‑1 (MQ=60)
                                                GCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGA                                              >  SRR4302543.3692234/1‑94 (MQ=60)
                                                GCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGA                                              <  SRR4302543.5167327/94‑1 (MQ=60)
                                                GCAACGGTTGAAGCGCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGA                                              <  SRR4302543.4099937/94‑1 (MQ=60)
                                                 CAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGCGTGGGCTGAA                                             >  SRR4302543.5272164/1‑94 (MQ=60)
                                                 CAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAA                                             >  SRR4302543.1574476/1‑94 (MQ=60)
                                                  AACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAA                                            >  SRR4302543.4444792/1‑94 (MQ=60)
                                                  AACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGGGGGCTGAAA                                            >  SRR4302543.2297958/1‑94 (MQ=60)
                                                  AACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGCTGGGCTGAAA                                            >  SRR4302543.4191004/1‑94 (MQ=60)
                                                    CGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAA                                          >  SRR4302543.3297613/1‑94 (MQ=60)
                                                     GGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAAT                                         <  SRR4302543.1177464/94‑1 (MQ=60)
                                                     GGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAAT                                         >  SRR4302543.2914714/1‑94 (MQ=60)
                                                     GGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAAT                                         >  SRR4302543.7860618/1‑94 (MQ=60)
                                                     GGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAAT                                         >  SRR4302543.6353518/1‑94 (MQ=60)
                                                     GGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAAT                                         >  SRR4302543.3970682/1‑94 (MQ=60)
                                                     GGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAAT                                         >  SRR4302543.3970681/1‑94 (MQ=60)
                                                      GTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATG                                        <  SRR4302543.937340/94‑1 (MQ=60)
                                                      GTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATG                                        <  SRR4302543.211394/94‑1 (MQ=60)
                                                      GTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATG                                        <  SRR4302543.384189/94‑1 (MQ=60)
                                                      GTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATG                                        >  SRR4302543.5342246/1‑94 (MQ=60)
                                                       TTGAATCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGC                                       <  SRR4302543.7666989/94‑1 (MQ=60)
                                                        TGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCC                                      >  SRR4302543.6472288/1‑94 (MQ=60)
                                                        TGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCC                                      <  SRR4302543.4224822/94‑1 (MQ=60)
                                                        TGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCC                                      >  SRR4302543.7489203/1‑94 (MQ=60)
                                                         GAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCA                                     <  SRR4302543.2785120/94‑1 (MQ=60)
                                                          AAGCTCTGTGGGAACAGATTCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCAT                                    <  SRR4302543.5940554/94‑1 (MQ=60)
                                                          AAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCAT                                    <  SRR4302543.5056070/94‑1 (MQ=60)
                                                          AAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCAT                                    >  SRR4302543.3343086/1‑94 (MQ=60)
                                                          AAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCAT                                    <  SRR4302543.2547791/94‑1 (MQ=60)
                                                          AAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCAT                                    <  SRR4302543.7612619/94‑1 (MQ=60)
                                                          AAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCAT                                    <  SRR4302543.776929/94‑1 (MQ=60)
                                                           AGCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATC                                   >  SRR4302543.3581625/1‑94 (MQ=60)
                                                            GCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCG                                  <  SRR4302543.3079159/94‑1 (MQ=60)
                                                            GCTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCG                                  <  SRR4302543.461729/94‑1 (MQ=60)
                                                             CTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGA                                 <  SRR4302543.7197647/94‑1 (MQ=60)
                                                             CTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGA                                 <  SRR4302543.4149711/94‑1 (MQ=60)
                                                             CTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGA                                 >  SRR4302543.4414015/1‑94 (MQ=60)
                                                             CTCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGA                                 <  SRR4302543.845268/94‑1 (MQ=60)
                                                              TCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGAC                                <  SRR4302543.585550/94‑1 (MQ=60)
                                                              TCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGAC                                <  SRR4302543.5296506/94‑1 (MQ=60)
                                                              CCTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGAC                                <  SRR4302543.2645596/94‑1 (MQ=60)
                                                               CTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACT                               >  SRR4302543.805717/1‑94 (MQ=60)
                                                               CTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACT                               >  SRR4302543.1435599/1‑94 (MQ=60)
                                                               CTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACT                               >  SRR4302543.7600282/1‑94 (MQ=60)
                                                               CTGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACT                               >  SRR4302543.3724985/1‑94 (MQ=60)
                                                                TGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTG                              <  SRR4302543.4650643/94‑1 (MQ=60)
                                                                TGGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTG                              <  SRR4302543.2640120/94‑1 (MQ=60)
                                                                 GGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGG                             <  SRR4302543.3277320/94‑1 (MQ=60)
                                                                 GGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGG                             <  SRR4302543.1660959/94‑1 (MQ=60)
                                                                 GGCGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGG                             >  SRR4302543.3741235/1‑94 (MQ=60)
                                                                   CGGAACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCT                           <  SRR4302543.1419706/94‑1 (MQ=60)
                                                                      AACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTC                        >  SRR4302543.1787397/1‑94 (MQ=60)
                                                                      AACAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTC                        >  SRR4302543.1027567/1‑94 (MQ=60)
                                                                        CAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCC                      <  SRR4302543.2448760/94‑1 (MQ=60)
                                                                        CAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCC                      <  SRR4302543.7214564/94‑1 (MQ=60)
                                                                        CAGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCC                      <  SRR4302543.6418835/94‑1 (MQ=60)
                                                                        CAGACCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCC                      <  SRR4302543.5292508/94‑1 (MQ=60)
                                                                         AGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCG                     >  SRR4302543.1825563/1‑94 (MQ=60)
                                                                         AGATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCG                     <  SRR4302543.5926971/94‑1 (MQ=60)
                                                                           ATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCT                   >  SRR4302543.5910416/1‑94 (MQ=60)
                                                                           ATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCC                   >  SRR4302543.1011568/1‑94 (MQ=60)
                                                                           ATCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCC                   >  SRR4302543.5470630/1‑94 (MQ=60)
                                                                            TCCGTCGGGCTGGCGGCGTGGTGATCGTCACCCCGGAATATAACTACTCGGTTCCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCT                  <  SRR4302543.1651209/94‑1 (MQ=60)
                                                                            TCCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCT                  <  SRR4302543.3631937/94‑1 (MQ=60)
                                                                             CCGTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTG                 >  SRR4302543.6000256/1‑94 (MQ=60)
                                                                               GTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCC               >  SRR4302543.2038900/1‑94 (MQ=60)
                                                                               GTCAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCC               >  SRR4302543.6306510/1‑94 (MQ=60)
                                                                               GTCAGGCTGACGGCGTGGTGACCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCC               <  SRR4302543.4652856/94‑1 (MQ=60)
                                                                                 CAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGG             <  SRR4302543.4367379/94‑1 (MQ=60)
                                                                                 CAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGG             <  SRR4302543.1646912/94‑1 (MQ=60)
                                                                                 CAGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGG             >  SRR4302543.1120478/1‑94 (MQ=60)
                                                                                  AGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAACATGCCATCGACTGGCTTTCCCGCCTGCCGGA            >  SRR4302543.6657327/1‑94 (MQ=60)
                                                                                  AGGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGA            >  SRR4302543.1202577/1‑94 (MQ=60)
                                                                                   GGCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGAT           <  SRR4302543.4836506/94‑1 (MQ=60)
                                                                                    GCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATC          <  SRR4302543.5147282/94‑1 (MQ=60)
                                                                                    GCTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATC          <  SRR4302543.6347320/94‑1 (MQ=60)
                                                                                     CTGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCA         >  SRR4302543.6613504/1‑94 (MQ=60)
                                                                                      TGACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAA        >  SRR4302543.4928854/1‑94 (MQ=60)
                                                                                       GACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAAC       <  SRR4302543.6750384/94‑1 (MQ=60)
                                                                                       GACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAAC       <  SRR4302543.3153480/94‑1 (MQ=60)
                                                                                       GACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAAC       >  SRR4302543.5536265/1‑94 (MQ=60)
                                                                                       GACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAAC       <  SRR4302543.6750386/94‑1 (MQ=60)
                                                                                       GACGGCGTGGTAATCGACACGCCGGAATATAACTCCTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTCCCCGCCTGCCGGATCAAC       <  SRR4302543.3153479/94‑1 (MQ=60)
                                                                                        ACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACC      <  SRR4302543.7093751/94‑1 (MQ=60)
                                                                                        ACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACC      >  SRR4302543.1543510/1‑94 (MQ=60)
                                                                                        ACGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACC      <  SRR4302543.3689814/94‑1 (MQ=60)
                                                                                         CGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCG     >  SRR4302543.6623875/1‑94 (MQ=60)
                                                                                         CGGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCG     >  SRR4302543.2236612/1‑94 (MQ=60)
                                                                                          GGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGC    >  SRR4302543.6596096/1‑94 (MQ=60)
                                                                                          GGCGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGC    >  SRR4302543.7688184/1‑94 (MQ=60)
                                                                                            CGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTG  >  SRR4302543.7267021/1‑94 (MQ=60)
                                                                                            |                                                                                             
GACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTG  >  NC_000913/3892413‑3892598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑