Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,902,432 G→A P265L (CCG→CTG)  bglF ← PTS system beta‑glucosides‑specific enzyme IIABC component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,902,4320GA99.5% 1363.1 / ‑5.2 378P265L (CCG→CTG) bglFPTS system beta‑glucosides‑specific enzyme IIABC component
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base A (189/186);  total (190/188)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

Only 100 of 388 total aligned reads displayed.

CCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCA  >  NC_000913/3902342‑3902521
                                                                                          |                                                                                         
  gccCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGccc                                                                                       <  1:3705408/93‑1 (MQ=255)
   cccATTACCGTGCCCGCTAATGCAGGAACCGCCTGATAAAGCCAGTGATTACCGGCGGCAATCAGTTCGCTTATCTAGGTTGATAGCATcccc                                                                                      >  2:7035887/1‑93 (MQ=255)
   cccATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGcccc                                                                                      >  1:1601370/1‑93 (MQ=255)
   cccATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGcccc                                                                                      >  2:5551854/1‑93 (MQ=255)
   cccATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGcccc                                                                                      >  2:2336084/1‑93 (MQ=255)
     cATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCccac                                                                                    >  1:570816/1‑93 (MQ=255)
     cATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCccac                                                                                    <  1:3888583/93‑1 (MQ=255)
     cATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAAGTTGATAGCAGCCccac                                                                                    >  2:6425839/1‑93 (MQ=255)
     cATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCCGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCccac                                                                                    >  1:6713515/1‑93 (MQ=255)
       ttACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCccacca                                                                                  >  2:2972357/1‑93 (MQ=255)
       ttACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCccacca                                                                                  >  1:2775919/1‑93 (MQ=255)
        tACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACcag                                                                                 <  1:5446388/93‑1 (MQ=255)
        tACCGCGCACGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACcag                                                                                 <  1:2716931/93‑1 (MQ=255)
         aCCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACcagc                                                                                <  2:4633659/93‑1 (MQ=255)
         aCCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACcagc                                                                                <  1:1654442/93‑1 (MQ=255)
          ccGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACcagca                                                                               <  1:2462039/93‑1 (MQ=255)
            gcgcCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGa                                                                             <  2:3105303/93‑1 (MQ=255)
            gcgcCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGa                                                                             <  2:7428401/93‑1 (MQ=255)
             cgcCCGCAAATGCAGAAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGaa                                                                            <  2:3599768/93‑1 (MQ=255)
              gcCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGaaa                                                                           <  2:7254341/93‑1 (MQ=255)
               cccGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAg                                                                          <  2:4082744/93‑1 (MQ=255)
                ccGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAgg                                                                         >  1:5178546/1‑93 (MQ=255)
                  gCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTg                                                                       >  1:3539372/1‑93 (MQ=255)
                   cAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGa                                                                      <  1:2953145/93‑1 (MQ=255)
                    aaaTGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGAc                                                                     <  1:6582849/93‑1 (MQ=255)
                      aTGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACgg                                                                   <  2:1137752/93‑1 (MQ=255)
                       tGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACggg                                                                  <  1:7151525/93‑1 (MQ=255)
                        gCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACgggg                                                                 >  2:5172914/1‑92 (MQ=255)
                        gCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACgggg                                                                 >  1:604499/1‑92 (MQ=255)
                          aGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGgtgt                                                               <  1:7540250/93‑1 (MQ=255)
                          aGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGgtgt                                                               <  1:5355494/93‑1 (MQ=255)
                          aGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGgtgt                                                               <  1:3946207/93‑1 (MQ=255)
                          aGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGgtgt                                                               <  1:7866041/93‑1 (MQ=255)
                                cGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTGCGCTTATCCAGTTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAAc                                                         <  2:5059466/93‑1 (MQ=255)
                                 gCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAAcc                                                        >  1:907585/1‑93 (MQ=255)
                                  ccTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCa                                                       <  1:4563923/93‑1 (MQ=255)
                                   cTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCAt                                                      >  2:3319568/1‑93 (MQ=255)
                                    tGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATc                                                     >  2:2698856/1‑93 (MQ=255)
                                    tGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATc                                                     >  1:4681587/1‑93 (MQ=255)
                                    tGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATc                                                     >  1:4660561/1‑93 (MQ=255)
                                     gATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCa                                                    >  1:2355434/1‑93 (MQ=255)
                                     gATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCa                                                    <  2:6687932/93‑1 (MQ=255)
                                     gATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCa                                                    <  2:1619378/93‑1 (MQ=255)
                                       tAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGa                                                  >  2:374266/1‑93 (MQ=255)
                                       tAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGa                                                  >  1:6905909/1‑93 (MQ=255)
                                       tAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGa                                                  <  1:1897166/93‑1 (MQ=255)
                                        aaaGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGAc                                                 >  2:35054/1‑93 (MQ=255)
                                         aaGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACa                                                <  1:49540/93‑1 (MQ=255)
                                         aaGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACa                                                <  2:4338651/93‑1 (MQ=255)
                                         aaGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACa                                                <  1:3298787/93‑1 (MQ=255)
                                           gCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATa                                              <  1:7387842/93‑1 (MQ=255)
                                           gCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATa                                              <  1:1165943/93‑1 (MQ=255)
                                            caagagATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATATCCATCAGACATAg                                             <  2:208303/91‑1 (MQ=255)
                                             cAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGc                                            <  2:2900451/93‑1 (MQ=255)
                                               gagaTAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCaa                                          <  2:3954538/93‑1 (MQ=255)
                                               gagaTAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCaa                                          >  2:850966/1‑93 (MQ=255)
                                               gagaTAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCaa                                          <  2:1473200/93‑1 (MQ=255)
                                                agaTAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAAt                                         >  1:2223205/1‑93 (MQ=255)
                                                 gaTAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATg                                        >  2:6058441/1‑93 (MQ=255)
                                                  aTAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATgg                                       <  1:3434339/93‑1 (MQ=255)
                                                   tAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGgt                                      >  2:7724938/1‑93 (MQ=255)
                                                    aaCCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGgtg                                     >  1:6439649/1‑93 (MQ=255)
                                                     aCCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGgtgt                                    <  2:1903641/93‑1 (MQ=255)
                                                      ccGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGtgtg                                   <  1:624117/93‑1 (MQ=255)
                                                       cggcggCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTga                                  <  1:4826075/93‑1 (MQ=255)
                                                       cggcggCAATCAGTTCGCTTATCCAGGTGGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTga                                  <  1:375754/93‑1 (MQ=255)
                                                        ggcggcAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTgaa                                 <  1:566561/93‑1 (MQ=255)
                                                         gcggcAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACTTAGCAATGGTGTgaag                                <  2:7509497/93‑1 (MQ=255)
                                                          cggcAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTgaaga                               <  2:157914/93‑1 (MQ=255)
                                                          cggcAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTgaaga                               <  1:4396068/93‑1 (MQ=255)
                                                             cAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAt                            <  2:6958410/93‑1 (MQ=255)
                                                             cAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAt                            <  1:1299380/93‑1 (MQ=255)
                                                             cAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAt                            >  1:7559348/1‑93 (MQ=255)
                                                              aaTCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAtt                           <  2:5230144/93‑1 (MQ=255)
                                                               aTCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAACttt                          >  1:4049967/1‑93 (MQ=255)
                                                               aTCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAttt                          >  1:5206009/1‑93 (MQ=255)
                                                               aTCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAttt                          >  1:3124207/1‑93 (MQ=255)
                                                               aTCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAttt                          >  2:1359092/1‑93 (MQ=255)
                                                                tCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAtttt                         <  1:1047312/93‑1 (MQ=255)
                                                                tCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAtttt                         >  2:6280721/1‑93 (MQ=255)
                                                                  aGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTg                       >  2:4250944/1‑93 (MQ=255)
                                                                   gTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGa                      <  2:4867183/93‑1 (MQ=255)
                                                                   gTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGa                      >  2:2518107/1‑93 (MQ=255)
                                                                   gTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGa                      <  1:2091215/93‑1 (MQ=255)
                                                                    ttCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGAt                     <  2:7858175/93‑1 (MQ=255)
                                                                    ttCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGAt                     <  2:4383123/93‑1 (MQ=255)
                                                                     tCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGAtt                    >  1:5107793/1‑93 (MQ=255)
                                                                          tATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGa               <  2:4738903/93‑1 (MQ=255)
                                                                          tATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGa               <  2:6847687/93‑1 (MQ=255)
                                                                           aTCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGAc              <  1:5784365/93‑1 (MQ=255)
                                                                           aTCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGAc              <  2:3460454/93‑1 (MQ=255)
                                                                           aTCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGAc              <  2:7167277/93‑1 (MQ=255)
                                                                            tCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACg             >  1:5563556/1‑93 (MQ=255)
                                                                              cAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGt           >  2:450649/1‑93 (MQ=255)
                                                                              cAGGTTGATAGCAGCCCCACCAGCAGAAAGGCGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACgga           >  2:5738429/1‑92 (MQ=255)
                                                                               aGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCTGACGGTa          >  2:3237009/1‑93 (MQ=255)
                                                                                ggTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTaa         >  2:1734263/1‑93 (MQ=255)
                                                                                    gATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCAc     <  1:1722957/93‑1 (MQ=255)
                                                                                    gATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCAc     >  2:1014791/1‑93 (MQ=255)
                                                                                     aTAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACg    >  2:7085520/1‑93 (MQ=255)
                                                                                          |                                                                                         
CCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCA  >  NC_000913/3902342‑3902521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 201 total aligned reads displayed.
AGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAA  >  NC_000913/3902340‑3902525
                                                                                            |                                                                                             
AGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAG                                                                                              >  SRR4302543.2485178/1‑94 (MQ=60)
 GCCGCCCATTACCTCGCCCGCAAATGCAGGAACCGCCTGATAAAGGCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGC                                                                                             <  SRR4302543.56617/94‑1 (MQ=60)
  CCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCC                                                                                            <  SRR4302543.3097287/94‑1 (MQ=60)
  CCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCC                                                                                            <  SRR4302543.761066/94‑1 (MQ=60)
    GCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCC                                                                                          >  SRR4302543.526908/1‑94 (MQ=60)
    GCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCC                                                                                          <  SRR4302543.3737974/94‑1 (MQ=60)
    GCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCC                                                                                          <  SRR4302543.7616793/94‑1 (MQ=60)
    GCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCC                                                                                          >  SRR4302543.5203182/1‑94 (MQ=60)
    GCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCC                                                                                          >  SRR4302543.1615662/1‑94 (MQ=60)
     CCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCC                                                                                         >  SRR4302543.5163840/1‑94 (MQ=60)
     CCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCA                                                                                         >  SRR4302543.3352793/1‑94 (MQ=60)
      CCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCAC                                                                                        >  SRR4302543.1806398/1‑94 (MQ=60)
      CCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCAC                                                                                        >  SRR4302543.576039/1‑94 (MQ=60)
      CCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCAC                                                                                        >  SRR4302543.3041816/1‑94 (MQ=60)
      CCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCCGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCAC                                                                                        >  SRR4302543.6776955/1‑94 (MQ=60)
       CATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACC                                                                                       <  SRR4302543.3922913/94‑1 (MQ=60)
       CATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACC                                                                                       <  SRR4302543.6635548/94‑1 (MQ=60)
        ATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCA                                                                                      >  SRR4302543.5733083/1‑94 (MQ=60)
        ATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCA                                                                                      >  SRR4302543.3983198/1‑94 (MQ=60)
        ATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCA                                                                                      >  SRR4302543.2801193/1‑94 (MQ=60)
        ATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCA                                                                                      >  SRR4302543.4714356/1‑94 (MQ=60)
         TTCCCGCGCCCGCAAATGCAGGACCCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAG                                                                                     <  SRR4302543.7355520/94‑1 (MQ=60)
          TACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGC                                                                                    <  SRR4302543.5495810/94‑1 (MQ=60)
          TACCGCGCACGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGC                                                                                    <  SRR4302543.2741620/94‑1 (MQ=60)
           ACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCA                                                                                   <  SRR4302543.1669248/94‑1 (MQ=60)
            CCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAG                                                                                  <  SRR4302543.2484235/94‑1 (MQ=60)
            CCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAG                                                                                  <  SRR4302543.901663/94‑1 (MQ=60)
             CGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGA                                                                                 <  SRR4302543.4860167/94‑1 (MQ=60)
             CGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGA                                                                                 <  SRR4302543.5446719/94‑1 (MQ=60)
             CGCGCCCGCAAATGCAGAACCCGCCTGATAAAGCCAGAGATAACCGGCGGCACTCCGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGA                                                                                 <  SRR4302543.2114017/94‑1 (MQ=60)
                GCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAG                                                                              >  SRR4302543.248947/1‑94 (MQ=60)
                GCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAG                                                                              <  SRR4302543.1244440/94‑1 (MQ=60)
                 CCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGG                                                                             >  SRR4302543.5225292/1‑94 (MQ=60)
                 CCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGG                                                                             <  SRR4302543.700482/94‑1 (MQ=60)
                  CCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGT                                                                            <  SRR4302543.5826035/94‑1 (MQ=60)
                  CCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGT                                                                            >  SRR4302543.5407365/1‑94 (MQ=60)
                  CCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGG                                                                            >  SRR4302543.332053/1‑94 (MQ=60)
                   CGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTG                                                                           <  SRR4302543.4565831/94‑1 (MQ=60)
                   CGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTG                                                                           >  SRR4302543.3570836/1‑94 (MQ=60)
                   CGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTG                                                                           >  SRR4302543.3512408/1‑94 (MQ=60)
                   CGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTG                                                                           >  SRR4302543.3933293/1‑94 (MQ=60)
                   CGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTG                                                                           <  SRR4302543.3371478/94‑1 (MQ=60)
                   CGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTG                                                                           <  SRR4302543.5555227/94‑1 (MQ=60)
                   CGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTG                                                                           <  SRR4302543.590699/94‑1 (MQ=60)
                    GCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGA                                                                          <  SRR4302543.1882176/94‑1 (MQ=60)
                     CAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGAC                                                                         <  SRR4302543.7707173/94‑1 (MQ=60)
                     CAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGAC                                                                         >  SRR4302543.24098/1‑94 (MQ=60)
                     CAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGAC                                                                         <  SRR4302543.4304968/94‑1 (MQ=60)
                     CAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGAC                                                                         >  SRR4302543.4788278/1‑94 (MQ=60)
                     CAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGAC                                                                         <  SRR4302543.2979960/94‑1 (MQ=60)
                     CAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGAC                                                                         <  SRR4302543.1959763/94‑1 (MQ=60)
                      AAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACG                                                                        >  SRR4302543.2700869/1‑94 (MQ=60)
                      AAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACG                                                                        <  SRR4302543.5192199/94‑1 (MQ=60)
                      AAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACG                                                                        <  SRR4302543.6644845/94‑1 (MQ=60)
                        ATGCAGGAGCCGCCTGATAAAGCCAGAGATAGCCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGG                                                                      <  SRR4302543.6476839/94‑1 (MQ=60)
                        ATGCAGGACCCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGG                                                                      <  SRR4302543.3827342/94‑1 (MQ=60)
                         TGCAGGAGCCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGT                                                                     <  SRR4302543.3599794/94‑1 (MQ=60)
                         TGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGT                                                                     <  SRR4302543.5739848/94‑1 (MQ=60)
                         TGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGT                                                                     <  SRR4302543.7221034/94‑1 (MQ=60)
                         TGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGT                                                                     >  SRR4302543.5050548/1‑94 (MQ=60)
                         TGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGG                                                                     >  SRR4302543.610030/1‑94 (MQ=60)
                           CAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGT                                                                   <  SRR4302543.7519531/94‑1 (MQ=60)
                            AGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTG                                                                  <  SRR4302543.7940114/94‑1 (MQ=60)
                            AGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTG                                                                  <  SRR4302543.7940115/94‑1 (MQ=60)
                            AGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTG                                                                  <  SRR4302543.7612120/94‑1 (MQ=60)
                            AGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTG                                                                  <  SRR4302543.7612119/94‑1 (MQ=60)
                            AGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTG                                                                  >  SRR4302543.5130090/1‑94 (MQ=60)
                            AGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTG                                                                  <  SRR4302543.5403966/94‑1 (MQ=60)
                            AGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTG                                                                  <  SRR4302543.3981095/94‑1 (MQ=60)
                              GAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGAT                                                                <  SRR4302543.6768202/94‑1 (MQ=60)
                                ACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAA                                                              <  SRR4302543.2745501/94‑1 (MQ=60)
                                  CGCCTGATAAAGCCAGAGATAACCGGTGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGAGTGATAACC                                                            >  SRR4302543.7003244/1‑94 (MQ=60)
                                  CGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACC                                                            >  SRR4302543.915571/1‑94 (MQ=60)
                                  CGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACC                                                            >  SRR4302543.5463325/1‑94 (MQ=60)
                                   GCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCA                                                           <  SRR4302543.4908945/94‑1 (MQ=60)
                                   GCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCA                                                           >  SRR4302543.874469/1‑94 (MQ=60)
                                    CCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCAT                                                          <  SRR4302543.4605453/94‑1 (MQ=60)
                                    CCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCAT                                                          >  SRR4302543.3099335/1‑94 (MQ=60)
                                    CCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCAT                                                          <  SRR4302543.6213544/94‑1 (MQ=60)
                                    CCCGATAAAGCCAGAGAAAACCCGCCGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCAT                                                          <  SRR4302543.2451501/94‑1 (MQ=60)
                                     CTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATC                                                         >  SRR4302543.4703012/1‑94 (MQ=60)
                                     CTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATC                                                         >  SRR4302543.4724278/1‑94 (MQ=60)
                                     CTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATC                                                         >  SRR4302543.4703011/1‑94 (MQ=60)
                                     CTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGCGACGGGTGTGATAACCATC                                                         >  SRR4302543.1702804/1‑94 (MQ=60)
                                      TGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCGGAAAGGTGACGGGTGTGATAACCATCA                                                        >  SRR4302543.3927645/1‑94 (MQ=60)
                                      TGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCA                                                        <  SRR4302543.2899504/94‑1 (MQ=60)
                                      TGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCA                                                        >  SRR4302543.2376796/1‑94 (MQ=60)
                                       GATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAG                                                       <  SRR4302543.5823607/94‑1 (MQ=60)
                                       GATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAG                                                       >  SRR4302543.4716071/1‑94 (MQ=60)
                                        ATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGGTAGCAGCCCCAGCAGCAGAAAGGTGACGGGTGTGATAACCATCAGC                                                      >  SRR4302543.6488548/1‑94 (MQ=60)
                                        ATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGA                                                      >  SRR4302543.6970805/1‑94 (MQ=60)
                                         TAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGAC                                                     >  SRR4302543.5619735/1‑94 (MQ=60)
                                         TAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGAC                                                     >  SRR4302543.7499726/1‑94 (MQ=60)
                                         TAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGAC                                                     <  SRR4302543.2084166/94‑1 (MQ=60)
                                         TAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGAC                                                     <  SRR4302543.1914236/94‑1 (MQ=60)
                                           AAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACAT                                                   <  SRR4302543.49987/94‑1 (MQ=60)
                                           AAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACAT                                                   <  SRR4302543.3328552/94‑1 (MQ=60)
                                           AAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACAT                                                   <  SRR4302543.1279886/94‑1 (MQ=60)
                                            AGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATA                                                  <  SRR4302543.4011700/94‑1 (MQ=60)
                                            AGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATA                                                  <  SRR4302543.1622890/94‑1 (MQ=60)
                                             GCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAG                                                 <  SRR4302543.1176543/94‑1 (MQ=60)
                                             GCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAG                                                 <  SRR4302543.7458824/94‑1 (MQ=60)
                                             ACCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAG                                                 <  SRR4302543.2793683/94‑1 (MQ=60)
                                              CCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGC                                                <  SRR4302543.7079980/94‑1 (MQ=60)
                                              CCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGC                                                >  SRR4302543.3760171/1‑94 (MQ=60)
                                               CAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCA                                               >  SRR4302543.627741/1‑94 (MQ=60)
                                               CAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCA                                               <  SRR4302543.3731899/94‑1 (MQ=60)
                                                AGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAA                                              >  SRR4302543.7392918/1‑94 (MQ=60)
                                                AGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAA                                              <  SRR4302543.2126264/94‑1 (MQ=60)
                                                AGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAA                                              >  SRR4302543.2794662/1‑94 (MQ=60)
                                                 GAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAAT                                             >  SRR4302543.2243272/1‑94 (MQ=60)
                                                 GAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAAT                                             <  SRR4302543.6018998/94‑1 (MQ=60)
                                                 GAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAAT                                             >  SRR4302543.6556716/1‑94 (MQ=60)
                                                 GAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAAT                                             <  SRR4302543.5701343/94‑1 (MQ=60)
                                                 GAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAAT                                             <  SRR4302543.4070551/94‑1 (MQ=60)
                                                 GAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAAT                                             <  SRR4302543.4630334/94‑1 (MQ=60)
                                                  AGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATG                                            >  SRR4302543.4600890/1‑94 (MQ=60)
                                                  AGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATG                                            <  SRR4302543.6686743/94‑1 (MQ=60)
                                                   GATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGG                                           <  SRR4302543.3283084/94‑1 (MQ=60)
                                                   GATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGG                                           >  SRR4302543.1660252/1‑94 (MQ=60)
                                                   GATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGG                                           <  SRR4302543.5248486/94‑1 (MQ=60)
                                                   GATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGG                                           <  SRR4302543.5248487/94‑1 (MQ=60)
                                                   GATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGG                                           >  SRR4302543.3487427/1‑94 (MQ=60)
                                                    ATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGT                                          <  SRR4302543.3465079/94‑1 (MQ=60)
                                                    ATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGT                                          <  SRR4302543.5601402/94‑1 (MQ=60)
                                                     TAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTG                                         <  SRR4302543.6489544/94‑1 (MQ=60)
                                                     TAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTG                                         >  SRR4302543.6500321/1‑94 (MQ=60)
                                                     TAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTG                                         >  SRR4302543.2833483/1‑94 (MQ=60)
                                                     TAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTG                                         >  SRR4302543.2846322/1‑94 (MQ=60)
                                                       ACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTG                                       <  SRR4302543.189154/94‑1 (MQ=60)
                                                       ACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTG                                       >  SRR4302543.1611716/1‑94 (MQ=60)
                                                        CCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGA                                      <  SRR4302543.629831/94‑1 (MQ=60)
                                                         CGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAA                                     <  SRR4302543.4870116/94‑1 (MQ=60)
                                                         CGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAA                                     >  SRR4302543.5894746/1‑94 (MQ=60)
                                                         CGGCGGCAATCAGTTCGCTTATCCAGGTGGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAA                                     <  SRR4302543.379213/94‑1 (MQ=60)
                                                          GGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAG                                    <  SRR4302543.6897655/94‑1 (MQ=60)
                                                          GGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAG                                    <  SRR4302543.571748/94‑1 (MQ=60)
                                                            CGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAA                                  <  SRR4302543.4435922/94‑1 (MQ=60)
                                                            CGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAA                                  >  SRR4302543.5245151/1‑94 (MQ=60)
                                                              GCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAT                                <  SRR4302543.7806700/94‑1 (MQ=60)
                                                              GCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAT                                >  SRR4302543.7535162/1‑94 (MQ=60)
                                                              GCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAT                                <  SRR4302543.5633348/94‑1 (MQ=60)
                                                              GCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAT                                >  SRR4302543.7631314/1‑94 (MQ=60)
                                                               CAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCATAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATT                               >  SRR4302543.2335542/1‑94 (MQ=60)
                                                               CAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATT                               >  SRR4302543.4802903/1‑94 (MQ=60)
                                                               CAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATT                               <  SRR4302543.1310923/94‑1 (MQ=60)
                                                                AATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAACTTT                              >  SRR4302543.4086204/1‑94 (MQ=60)
                                                                AATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTT                              >  SRR4302543.3152309/1‑94 (MQ=60)
                                                                AATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTT                              <  SRR4302543.5395097/94‑1 (MQ=60)
                                                                AATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTT                              >  SRR4302543.5252931/1‑94 (MQ=60)
                                                                AATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTT                              >  SRR4302543.2380609/1‑94 (MQ=60)
                                                                AATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTT                              <  SRR4302543.5346141/94‑1 (MQ=60)
                                                                 ATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTT                             >  SRR4302543.2159876/1‑94 (MQ=60)
                                                                 ATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTT                             >  SRR4302543.4883042/1‑94 (MQ=60)
                                                                 ATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTT                             >  SRR4302543.4883040/1‑94 (MQ=60)
                                                                  TCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTT                            <  SRR4302543.1056692/94‑1 (MQ=60)
                                                                   CAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTG                           <  SRR4302543.1717213/94‑1 (MQ=60)
                                                                    AGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGA                          >  SRR4302543.616751/1‑94 (MQ=60)
                                                                     GTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGAT                         >  SRR4302543.4128915/1‑94 (MQ=60)
                                                                     GTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGAT                         <  SRR4302543.2109895/94‑1 (MQ=60)
                                                                     GTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGAT                         >  SRR4302543.1964210/1‑94 (MQ=60)
                                                                      TTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATT                        >  SRR4302543.5154010/1‑94 (MQ=60)
                                                                      GTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATT                        <  SRR4302543.1110494/94‑1 (MQ=60)
                                                                        CGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGC                      >  SRR4302543.4614025/1‑94 (MQ=60)
                                                                         GCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCC                     >  SRR4302543.3843317/1‑94 (MQ=60)
                                                                          CTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCG                    >  SRR4302543.3382058/1‑94 (MQ=60)
                                                                           TTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGA                   >  SRR4302543.146349/1‑94 (MQ=60)
                                                                            TATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGAC                  <  SRR4302543.2579491/94‑1 (MQ=60)
                                                                            TATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGAC                  >  SRR4302543.6891744/1‑94 (MQ=60)
                                                                             ATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACG                 >  SRR4302543.5614157/1‑94 (MQ=60)
                                                                             ATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACG                 <  SRR4302543.5837000/94‑1 (MQ=60)
                                                                              TCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGG                <  SRR4302543.3788475/94‑1 (MQ=60)
                                                                              TCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGG                <  SRR4302543.572008/94‑1 (MQ=60)
                                                                               CCAGGTTGATGGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGTCATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGA               >  SRR4302543.165719/1‑94 (MQ=60)
                                                                               CCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGT               >  SRR4302543.115490/1‑94 (MQ=60)
                                                                               CCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGT               <  SRR4302543.4588423/94‑1 (MQ=60)
                                                                                CAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTA              >  SRR4302543.3582367/1‑94 (MQ=60)
                                                                                CAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTA              <  SRR4302543.5829910/94‑1 (MQ=60)
                                                                                CAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTA              <  SRR4302543.389779/94‑1 (MQ=60)
                                                                                 AGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAA             >  SRR4302543.1407715/1‑94 (MQ=60)
                                                                                 AGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAA             >  SRR4302543.3932014/1‑94 (MQ=60)
                                                                                   GTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACC           >  SRR4302543.6888332/1‑94 (MQ=60)
                                                                                   GTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACC           >  SRR4302543.418886/1‑94 (MQ=60)
                                                                                    TTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCA          <  SRR4302543.5106616/94‑1 (MQ=60)
                                                                                     TGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCAC         >  SRR4302543.6319339/1‑94 (MQ=60)
                                                                                     TGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCAC         >  SRR4302543.1223047/1‑94 (MQ=60)
                                                                                     TGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCAC         <  SRR4302543.3777342/94‑1 (MQ=60)
                                                                                     TGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCAC         >  SRR4302543.1720247/1‑94 (MQ=60)
                                                                                      GATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACG        <  SRR4302543.1738320/94‑1 (MQ=60)
                                                                                      GATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACG        <  SRR4302543.7315129/94‑1 (MQ=60)
                                                                                      GATAGCAGCCCCACCAGCAGAAAGGGGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACG        >  SRR4302543.2374801/1‑94 (MQ=60)
                                                                                       ATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGC       >  SRR4302543.6635704/1‑94 (MQ=60)
                                                                                       ATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGC       >  SRR4302543.7816084/1‑94 (MQ=60)
                                                                                        TAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCA      >  SRR4302543.3284081/1‑94 (MQ=60)
                                                                                          GCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATT    >  SRR4302543.5706925/1‑94 (MQ=60)
                                                                                          GCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGATAACCACGCATT    <  SRR4302543.4796441/94‑1 (MQ=60)
                                                                                            AGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAA  <  SRR4302543.4168357/94‑1 (MQ=60)
                                                                                            AGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAA  >  SRR4302543.1291299/1‑94 (MQ=60)
                                                                                            AGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAA  >  SRR4302543.5051626/1‑94 (MQ=60)
                                                                                            AGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAA  >  SRR4302543.2182041/1‑94 (MQ=60)
                                                                                            |                                                                                             
AGCCGCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAA  >  NC_000913/3902340‑3902525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑