Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,905,748 A→G S83P (TCT→CCT)  pstB ← ATP‑binding component of high‑affinity phosphate‑specific transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,905,7480AG100.0% 1269.3 / NA 402S83P (TCT→CCT) pstBATP‑binding component of high‑affinity phosphate‑specific transport system
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (216/186);  total (216/186)

Only 100 of 417 total aligned reads displayed.

AAGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGAGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCA  >  NC_000913/3905658‑3905837
                                                                                          |                                                                                         
aaGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGt                                                                                         <  1:5223920/93‑1 (MQ=255)
    gATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGt                                                                                     >  1:5728204/1‑93 (MQ=255)
    gATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGt                                                                                     >  2:1813587/1‑93 (MQ=255)
     aTGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTc                                                                                    >  1:5981436/1‑93 (MQ=255)
      tgttgtCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCa                                                                                   >  1:2412434/1‑93 (MQ=255)
      tgttgtCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCa                                                                                   <  2:2178438/93‑1 (MQ=255)
      tgttgtCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCa                                                                                   >  1:7584076/1‑93 (MQ=255)
         tgtCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGa                                                                                >  1:850368/1‑93 (MQ=255)
          gtCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGAt                                                                               <  1:613299/93‑1 (MQ=255)
          gtCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGAt                                                                               <  2:5133552/93‑1 (MQ=255)
           tCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGAtg                                                                              >  2:6305317/1‑93 (MQ=255)
           tCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGAtg                                                                              <  1:7087401/93‑1 (MQ=255)
            cGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGAtgt                                                                             <  1:6686471/93‑1 (MQ=255)
             gTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGAtgtt                                                                            >  1:2173823/1‑93 (MQ=255)
              tAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGAtgttg                                                                           >  2:7875448/1‑93 (MQ=255)
                gATGGTCATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTc                                                                         >  1:484426/1‑93 (MQ=255)
                gATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTc                                                                         <  2:3081756/93‑1 (MQ=255)
                gATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTc                                                                         >  2:4963955/1‑93 (MQ=255)
                gATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTc                                                                         >  2:5894258/1‑93 (MQ=255)
                gATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTc                                                                         <  2:7162536/93‑1 (MQ=255)
                  tGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGc                                                                       <  1:1861328/93‑1 (MQ=255)
                  tGGACATCGGAAACGGCGGCGGGTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGc                                                                       >  2:7743242/1‑93 (MQ=255)
                    gACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCa                                                                     >  1:7777861/1‑93 (MQ=255)
                     aCATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCAt                                                                    <  2:6473934/93‑1 (MQ=255)
                      cATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATc                                                                   <  2:7587396/93‑1 (MQ=255)
                      cATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATc                                                                   <  2:5767955/93‑1 (MQ=255)
                       aTCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCa                                                                  >  1:4639296/1‑93 (MQ=255)
                       aTCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCa                                                                  >  1:5605747/1‑93 (MQ=255)
                        tCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCaa                                                                 <  1:1042263/93‑1 (MQ=255)
                        tCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCaa                                                                 >  2:229259/1‑93 (MQ=255)
                        tCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGGCAGGATGTTGTGGCCATTaa                                                                 >  1:3211645/1‑93 (MQ=255)
                         cGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAg                                                                <  2:1036859/93‑1 (MQ=255)
                         cGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAg                                                                <  1:696687/93‑1 (MQ=255)
                           gAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCa                                                              >  2:1745900/1‑93 (MQ=255)
                             aaCGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGa                                                            <  2:7527295/93‑1 (MQ=255)
                              aCGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGaa                                                           >  1:3121189/1‑93 (MQ=255)
                              aCGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGaa                                                           >  1:2225273/1‑93 (MQ=255)
                               cGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGGCAGGATGTTGTCGCCATGAAGCAGAAt                                                          >  2:5499505/1‑93 (MQ=255)
                                    tCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCAc                                                     >  2:1290067/1‑93 (MQ=255)
                                    tCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCAc                                                     <  2:3917133/93‑1 (MQ=255)
                                    tCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCAc                                                     <  2:2354818/93‑1 (MQ=255)
                                      ggTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCt                                                   <  1:4714701/93‑1 (MQ=255)
                                      ggTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCt                                                   <  1:7441714/93‑1 (MQ=255)
                                         ttCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTcc                                                <  2:7427300/93‑1 (MQ=255)
                                            tGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCa                                             >  1:7210526/1‑93 (MQ=255)
                                             ggAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCAc                                            <  1:2538611/93‑1 (MQ=255)
                                             ggAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCAc                                            >  1:7921266/1‑93 (MQ=255)
                                              gAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACg                                           >  1:6430725/1‑93 (MQ=255)
                                                  acCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACgctgc                                       <  1:7645453/93‑1 (MQ=255)
                                                   ccATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACgctgct                                      >  1:4450354/1‑93 (MQ=255)
                                                    cATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCTCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTc                                     <  2:2020797/93‑1 (MQ=255)
                                                     aTGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTcc                                    <  2:6803010/93‑1 (MQ=255)
                                                      tGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCg                                   >  1:169551/1‑93 (MQ=255)
                                                      tGCCAACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCg                                   <  2:3262283/93‑1 (MQ=255)
                                                        cccACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCggg                                 <  2:635741/93‑1 (MQ=255)
                                                        cccACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCggg                                 <  1:2354631/93‑1 (MQ=255)
                                                          cACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGtc                               >  1:1411151/1‑92 (MQ=255)
                                                          cACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTa                               <  1:2065410/93‑1 (MQ=255)
                                                          cACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTa                               >  2:6651798/1‑93 (MQ=255)
                                                           aCTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTAc                              >  1:941979/1‑93 (MQ=255)
                                                           aCTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTAc                              <  1:413334/93‑1 (MQ=255)
                                                           aCTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGGAc                              >  1:3978761/1‑93 (MQ=255)
                                                            cTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACa                             <  2:2915812/93‑1 (MQ=255)
                                                              ttCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGt                           >  1:395322/1‑93 (MQ=255)
                                                              ttCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGt                           >  2:5052461/1‑93 (MQ=255)
                                                                  cacgcaGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCaa                       <  1:1141021/93‑1 (MQ=255)
                                                                     gcagcaGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACa                    <  1:3776390/93‑1 (MQ=255)
                                                                     gcagcaGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACa                    >  2:4725255/1‑93 (MQ=255)
                                                                        gcagTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACAttt                 >  2:3594073/1‑93 (MQ=255)
                                                                        gcagTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCGGCTCCGGGTACAGTTCAAACAttt                 >  2:4245672/1‑93 (MQ=255)
                                                                         cagTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACAtttt                <  1:3907899/93‑1 (MQ=255)
                                                                          agTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTttg               <  1:6757039/93‑1 (MQ=255)
                                                                          agTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTttg               <  2:4884607/93‑1 (MQ=255)
                                                                           gTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCACCGCGTACAGTTCAAACATTttgt              >  2:338293/1‑93 (MQ=255)
                                                                            tGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTttgtt             >  1:2759897/1‑93 (MQ=255)
                                                                             gCGATATCCGGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAAGTTCACCTTCCGCACGCTGCTACGGGTACAGTTCAAACATTttgttg            <  1:4318570/93‑1 (MQ=255)
                                                                              cGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGa           <  1:2996534/93‑1 (MQ=255)
                                                                               gATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGaa          <  2:3428630/93‑1 (MQ=255)
                                                                               gATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGaa          >  1:549205/1‑93 (MQ=255)
                                                                                atatCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAg         <  1:4930049/93‑1 (MQ=255)
                                                                                 tatCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAgg        <  2:4622790/93‑1 (MQ=255)
                                                                                 tatCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAgg        >  1:406704/1‑93 (MQ=255)
                                                                                 tatCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAg         <  2:3823566/92‑1 (MQ=255)
                                                                                   tCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTa      >  1:7301975/1‑93 (MQ=255)
                                                                                   tCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTa      <  1:3348429/93‑1 (MQ=255)
                                                                                   tCCTGAGGGGTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTa      >  2:5242839/1‑93 (MQ=255)
                                                                                    ccTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTAc     <  2:4437764/93‑1 (MQ=255)
                                                                                    ccTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTAc     <  1:5345830/93‑1 (MQ=255)
                                                                                    ccTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTAc     <  1:6299562/93‑1 (MQ=255)
                                                                                    ccTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTAc     >  2:5968788/1‑93 (MQ=255)
                                                                                     cTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTCCAGTTCAAACATTTTGTTGAAGGTACg    >  2:61089/1‑93 (MQ=255)
                                                                                     cTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACg    >  2:6441012/1‑93 (MQ=255)
                                                                                     cTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACg    <  1:6563861/93‑1 (MQ=255)
                                                                                      tGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGCAGGTACgc   >  1:3267326/1‑93 (MQ=255)
                                                                                      tGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACgc   >  1:5851475/1‑93 (MQ=255)
                                                                                      tGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACgc   >  1:1613714/1‑93 (MQ=255)
                                                                                       gaggGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCATGCTGCTCCGGGTACAGTTCAAACATTTTGTAGAAAGTACgca  <  2:7005183/93‑1 (MQ=255)
                                                                                       gaggGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACgca  >  2:1524979/1‑93 (MQ=255)
                                                                                       gaggGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACgca  <  2:1912172/93‑1 (MQ=255)
                                                                                       gaggGTTGGTCAGGATGTTGTCGACTTCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTTTTGAAGGTACgca  <  2:2638762/93‑1 (MQ=255)
                                                                                          |                                                                                         
AAGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGAGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCA  >  NC_000913/3905658‑3905837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 249 total aligned reads displayed.
CAAAAGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGAGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGCAG  >  NC_000913/3905655‑3905841
                                                                                             |                                                                                             
CAAAAGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGG                                                                                               <  SRR4302543.3533127/94‑1 (MQ=60)
CAAAAGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGG                                                                                               <  SRR4302543.4294197/94‑1 (MQ=60)
CAAAAGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGG                                                                                               >  SRR4302543.1816981/1‑94 (MQ=60)
 AAAAGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGG                                                                                              <  SRR4302543.2110198/94‑1 (MQ=60)
 AAAAGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGG                                                                                              >  SRR4302543.4771932/1‑94 (MQ=60)
  AAAGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGT                                                                                             <  SRR4302543.5372613/94‑1 (MQ=60)
  AAAGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGT                                                                                             >  SRR4302543.7369699/1‑94 (MQ=60)
   AAGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTT                                                                                            >  SRR4302543.4593225/1‑94 (MQ=60)
    AGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTG                                                                                           >  SRR4302543.4961113/1‑94 (MQ=60)
    AGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTG                                                                                           <  SRR4302543.1878976/94‑1 (MQ=60)
    AGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTG                                                                                           >  SRR4302543.7987367/1‑94 (MQ=60)
      CGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGT                                                                                         >  SRR4302543.5780469/1‑94 (MQ=60)
      CGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGT                                                                                         >  SRR4302543.5780470/1‑94 (MQ=60)
       GATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTC                                                                                        >  SRR4302543.7616147/1‑94 (MQ=60)
       GATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTC                                                                                        <  SRR4302543.4479182/94‑1 (MQ=60)
       GATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTC                                                                                        >  SRR4302543.6036241/1‑94 (MQ=60)
       GATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTC                                                                                        >  SRR4302543.5886912/1‑94 (MQ=60)
        CTGTTGTCGTAGACGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCA                                                                                       <  SRR4302543.5183005/94‑1 (MQ=60)
        ATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCA                                                                                       >  SRR4302543.7656158/1‑94 (MQ=60)
        ATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCA                                                                                       <  SRR4302543.1665097/94‑1 (MQ=60)
        ATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCA                                                                                       >  SRR4302543.4908059/1‑94 (MQ=60)
         TGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACGCCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAG                                                                                      <  SRR4302543.5408709/94‑1 (MQ=60)
          GTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGG                                                                                     <  SRR4302543.5664783/94‑1 (MQ=60)
           TTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGA                                                                                    >  SRR4302543.857912/1‑94 (MQ=60)
            TGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGAT                                                                                   <  SRR4302543.1053505/94‑1 (MQ=60)
            TGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGAT                                                                                   <  SRR4302543.4869619/94‑1 (MQ=60)
            TGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGAT                                                                                   >  SRR4302543.719667/1‑94 (MQ=60)
             GTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATG                                                                                  <  SRR4302543.618904/94‑1 (MQ=60)
              TCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGT                                                                                 <  SRR4302543.6810994/94‑1 (MQ=60)
              TCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGT                                                                                 <  SRR4302543.6924517/94‑1 (MQ=60)
               CGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTT                                                                                >  SRR4302543.3193331/1‑94 (MQ=60)
               CGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTT                                                                                <  SRR4302543.6749593/94‑1 (MQ=60)
               CGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTT                                                                                <  SRR4302543.4105225/94‑1 (MQ=60)
               CGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTT                                                                                <  SRR4302543.241283/94‑1 (MQ=60)
               CGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTT                                                                                >  SRR4302543.2193298/1‑94 (MQ=60)
               CGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTT                                                                                >  SRR4302543.1284865/1‑94 (MQ=60)
                GTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTG                                                                               >  SRR4302543.3314751/1‑94 (MQ=60)
                GTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTG                                                                               >  SRR4302543.1267069/1‑94 (MQ=60)
                GTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTG                                                                               <  SRR4302543.7971374/94‑1 (MQ=60)
                  AGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTTCGATATCCTGAGGGTTGGTCAGGATGTTGTC                                                                             <  SRR4302543.7898838/94‑1 (MQ=60)
                  AGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTC                                                                             <  SRR4302543.7806378/94‑1 (MQ=60)
                  AGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTC                                                                             >  SRR4302543.1094858/1‑94 (MQ=60)
                  AGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTC                                                                             >  SRR4302543.2215268/1‑94 (MQ=60)
                   GATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCG                                                                            >  SRR4302543.2493478/1‑94 (MQ=60)
                    ATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGC                                                                           >  SRR4302543.4388502/1‑94 (MQ=60)
                    ATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGC                                                                           >  SRR4302543.6021589/1‑94 (MQ=60)
                     TGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCC                                                                          >  SRR4302543.7400199/1‑94 (MQ=60)
                     TGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCC                                                                          >  SRR4302543.481939/1‑94 (MQ=60)
                     TGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCC                                                                          <  SRR4302543.1728013/94‑1 (MQ=60)
                     TGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCC                                                                          <  SRR4302543.1878051/94‑1 (MQ=60)
                       GACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCAT                                                                        <  SRR4302543.2410472/94‑1 (MQ=60)
                         CATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCA                                                                      >  SRR4302543.5656822/1‑94 (MQ=60)
                         CATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCA                                                                      >  SRR4302543.4681488/1‑94 (MQ=60)
                          ATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAA                                                                     <  SRR4302543.763248/94‑1 (MQ=60)
                          ATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAA                                                                     >  SRR4302543.55875/1‑94 (MQ=60)
                           TCGGAAACGGCGTCTGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAG                                                                    <  SRR4302543.96935/94‑1 (MQ=60)
                           TCGGAAACGGCGTCGGTTTCTTGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAG                                                                    <  SRR4302543.2711021/94‑1 (MQ=60)
                           TCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAG                                                                    <  SRR4302543.1051556/94‑1 (MQ=60)
                            CGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGC                                                                   <  SRR4302543.703066/94‑1 (MQ=60)
                             GGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCA                                                                  <  SRR4302543.7250043/94‑1 (MQ=60)
                             GGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCA                                                                  <  SRR4302543.5840789/94‑1 (MQ=60)
                             GGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCA                                                                  >  SRR4302543.7706686/1‑94 (MQ=60)
                             GGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCA                                                                  >  SRR4302543.2887784/1‑94 (MQ=60)
                             GGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCA                                                                  >  SRR4302543.3855235/1‑94 (MQ=60)
                              GAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAG                                                                 >  SRR4302543.654905/1‑94 (MQ=60)
                                AACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAA                                                               >  SRR4302543.2245361/1‑94 (MQ=60)
                                AACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAA                                                               >  SRR4302543.3149260/1‑94 (MQ=60)
                                 ACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAAT                                                              <  SRR4302543.1796590/94‑1 (MQ=60)
                                 ACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAAT                                                              <  SRR4302543.7769877/94‑1 (MQ=60)
                                  CGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATT                                                             >  SRR4302543.7614482/1‑94 (MQ=60)
                                  CGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATT                                                             >  SRR4302543.847263/1‑94 (MQ=60)
                                  CGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATT                                                             <  SRR4302543.6756227/94‑1 (MQ=60)
                                   GGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTT                                                            >  SRR4302543.2399680/1‑94 (MQ=60)
                                   GGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTT                                                            >  SRR4302543.325666/1‑94 (MQ=60)
                                   GGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTT                                                            <  SRR4302543.4738753/94‑1 (MQ=60)
                                    GCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTC                                                           <  SRR4302543.4335608/94‑1 (MQ=60)
                                     CGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCC                                                          >  SRR4302543.2255240/1‑94 (MQ=60)
                                     CGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCA                                                          >  SRR4302543.4907845/1‑94 (MQ=60)
                                     CGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCA                                                          >  SRR4302543.945169/1‑94 (MQ=60)
                                     CGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTCTCGCCATCAAGCAGAATTTCA                                                          >  SRR4302543.2255241/1‑94 (MQ=60)
                                      GTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGCCAGGATGTTGTCGCCATCAAGCAGAATTTCAC                                                         <  SRR4302543.7347533/94‑1 (MQ=60)
                                      GTCGGGTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCAC                                                         <  SRR4302543.6383494/94‑1 (MQ=60)
                                      GTCCGTTTCAGGAACACCATTCCCACTTTCGCACGCGGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTGGTCGCCATCAAGCAGAATTTCAC                                                         <  SRR4302543.7180514/94‑1 (MQ=60)
                                       TCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACC                                                        >  SRR4302543.4201879/1‑94 (MQ=60)
                                        CGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCT                                                       >  SRR4302543.5298251/1‑94 (MQ=60)
                                        CGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCT                                                       <  SRR4302543.748529/94‑1 (MQ=60)
                                        CGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCT                                                       >  SRR4302543.4563232/1‑94 (MQ=60)
                                         GGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTT                                                      <  SRR4302543.7513040/94‑1 (MQ=60)
                                         GGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTT                                                      <  SRR4302543.4757777/94‑1 (MQ=60)
                                         GGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTT                                                      <  SRR4302543.7658064/94‑1 (MQ=60)
                                         GGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTT                                                      >  SRR4302543.830595/1‑94 (MQ=60)
                                         GGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTT                                                      <  SRR4302543.341071/94‑1 (MQ=60)
                                          GTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTC                                                     <  SRR4302543.3172324/94‑1 (MQ=60)
                                          GTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTC                                                     >  SRR4302543.3981553/1‑94 (MQ=60)
                                           TTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTACGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCC                                                    <  SRR4302543.5094997/94‑1 (MQ=60)
                                            TTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCG                                                   <  SRR4302543.5709481/94‑1 (MQ=60)
                                             TCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGC                                                  <  SRR4302543.2195137/94‑1 (MQ=60)
                                              CTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCA                                                 >  SRR4302543.7280427/1‑94 (MQ=60)
                                               TGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCAC                                                <  SRR4302543.2600974/94‑1 (MQ=60)
                                               TGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCAC                                                >  SRR4302543.7995670/1‑94 (MQ=60)
                                                GGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACG                                               <  SRR4302543.2561748/94‑1 (MQ=60)
                                                GGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACG                                               <  SRR4302543.3215202/94‑1 (MQ=60)
                                                GGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACG                                               >  SRR4302543.6491317/1‑94 (MQ=60)
                                                 GAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGC                                              <  SRR4302543.3381216/94‑1 (MQ=60)
                                                  AACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCT                                             >  SRR4302543.7833960/1‑94 (MQ=60)
                                                  AACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCT                                             >  SRR4302543.2505029/1‑94 (MQ=60)
                                                   ACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTG                                            <  SRR4302543.3974689/94‑1 (MQ=60)
                                                     CCCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCT                                          <  SRR4302543.4167597/94‑1 (MQ=60)
                                                     ACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCT                                          <  SRR4302543.7717954/94‑1 (MQ=60)
                                                     ACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCT                                          >  SRR4302543.4490659/1‑94 (MQ=60)
                                                        ATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCG                                       >  SRR4302543.171002/1‑94 (MQ=60)
                                                           CCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGT                                    <  SRR4302543.2375983/94‑1 (MQ=60)
                                                           CCCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGT                                    <  SRR4302543.5494505/94‑1 (MQ=60)
                                                            CCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTC                                   >  SRR4302543.1423906/1‑94 (MQ=60)
                                                            CCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTA                                   >  SRR4302543.694428/1‑94 (MQ=60)
                                                            CCACTTTCGCACGCAGCAGTGCGATATCCTGAGGGGTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTA                                   >  SRR4302543.4050531/1‑94 (MQ=60)
                                                             CACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTAC                                  >  SRR4302543.4014046/1‑94 (MQ=60)
                                                             CACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTAC                                  <  SRR4302543.2083879/94‑1 (MQ=60)
                                                             CACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTAC                                  >  SRR4302543.4144870/1‑94 (MQ=60)
                                                             CACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTAC                                  >  SRR4302543.950212/1‑94 (MQ=60)
                                                             CACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGGAC                                  >  SRR4302543.4014047/1‑94 (MQ=60)
                                                             CACTTTCGCACGCAGCAGTGCGATATCATGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTAC                                  <  SRR4302543.6237865/94‑1 (MQ=60)
                                                              ACTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACA                                 >  SRR4302543.6666628/1‑94 (MQ=60)
                                                               CTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAG                                <  SRR4302543.6002731/94‑1 (MQ=60)
                                                               CTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAG                                >  SRR4302543.6541798/1‑94 (MQ=60)
                                                               CTTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAG                                <  SRR4302543.1625390/94‑1 (MQ=60)
                                                                TTTCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGT                               >  SRR4302543.398975/1‑94 (MQ=60)
                                                                  TCGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTC                             <  SRR4302543.6694247/94‑1 (MQ=60)
                                                                   CGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCA                            >  SRR4302543.5376710/1‑94 (MQ=60)
                                                                   CGCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCA                            >  SRR4302543.3705467/1‑94 (MQ=60)
                                                                    GCACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAA                           >  SRR4302543.7110876/1‑94 (MQ=60)
                                                                     CACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAA                          >  SRR4302543.5592247/1‑94 (MQ=60)
                                                                     CACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAA                          >  SRR4302543.3093349/1‑94 (MQ=60)
                                                                     CACGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAA                          <  SRR4302543.1151413/94‑1 (MQ=60)
                                                                       CGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCGCCTTCCGCACGCTGCTCCGGGTACAGTTCAAACA                        <  SRR4302543.6080842/94‑1 (MQ=60)
                                                                       CGCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACA                        >  SRR4302543.5231967/1‑94 (MQ=60)
                                                                        GCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACAT                       <  SRR4302543.4008410/94‑1 (MQ=60)
                                                                        CCAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACAT                       <  SRR4302543.2109923/94‑1 (MQ=60)
                                                                         CAGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATT                      >  SRR4302543.3281093/1‑94 (MQ=60)
                                                                          AGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTT                     >  SRR4302543.910223/1‑94 (MQ=60)
                                                                          AGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTT                     >  SRR4302543.1439534/1‑94 (MQ=60)
                                                                          AGCAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTT                     <  SRR4302543.2490798/94‑1 (MQ=60)
                                                                            CAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTG                   <  SRR4302543.3942391/94‑1 (MQ=60)
                                                                            CAGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTG                   >  SRR4302543.7036212/1‑94 (MQ=60)
                                                                             AGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGT                  >  SRR4302543.1860956/1‑94 (MQ=60)
                                                                             AGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGT                  <  SRR4302543.6820857/94‑1 (MQ=60)
                                                                             AGTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGT                  >  SRR4302543.869737/1‑94 (MQ=60)
                                                                              GTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTT                 >  SRR4302543.7097703/1‑94 (MQ=60)
                                                                              GTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTT                 >  SRR4302543.4727298/1‑94 (MQ=60)
                                                                              GTGCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTT                 >  SRR4302543.2785008/1‑94 (MQ=60)
                                                                                GCGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGA               <  SRR4302543.3316311/94‑1 (MQ=60)
                                                                                GCGATATCCGGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAAGTTCACCTTCCGCACGCTGCTACGGGTACAGTTCAAACATTTTGTTGA               <  SRR4302543.4357788/94‑1 (MQ=60)
                                                                                 CGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAA              <  SRR4302543.3023720/94‑1 (MQ=60)
                                                                                 CGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAA              <  SRR4302543.1965202/94‑1 (MQ=60)
                                                                                 CGATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAA              >  SRR4302543.554264/1‑94 (MQ=60)
                                                                                  GATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAG             <  SRR4302543.6564159/94‑1 (MQ=60)
                                                                                  GATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAG             >  SRR4302543.6348536/1‑94 (MQ=60)
                                                                                  GATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAG             <  SRR4302543.6016979/94‑1 (MQ=60)
                                                                                   ATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGG            >  SRR4302543.4256882/1‑94 (MQ=60)
                                                                                   ATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGG            >  SRR4302543.410455/1‑94 (MQ=60)
                                                                                   ATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGG            >  SRR4302543.219230/1‑94 (MQ=60)
                                                                                   ATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGG            <  SRR4302543.4974957/94‑1 (MQ=60)
                                                                                   ATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGG            >  SRR4302543.3857293/1‑94 (MQ=60)
                                                                                   ATATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGG            >  SRR4302543.3857294/1‑94 (MQ=60)
                                                                                    TATCCTGGGGGTTGGTGAGGATGTTGGCGGCATCAAGCAGAATTGCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGGTGAAGGT           <  SRR4302543.6059246/94‑1 (MQ=60)
                                                                                    TATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGT           <  SRR4302543.1131262/94‑1 (MQ=60)
                                                                                    TATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGT           <  SRR4302543.1652312/94‑1 (MQ=60)
                                                                                     ATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTA          <  SRR4302543.5329497/94‑1 (MQ=60)
                                                                                     ATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTA          <  SRR4302543.4846754/94‑1 (MQ=60)
                                                                                     ATCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTA          >  SRR4302543.7372402/1‑94 (MQ=60)
                                                                                      TCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTTGGGGTACAGTTCAAACATTTTGTTGAAGGTAC         <  SRR4302543.205895/94‑1 (MQ=60)
                                                                                      TCCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTAC         <  SRR4302543.3378577/94‑1 (MQ=60)
                                                                                       CCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACG        <  SRR4302543.5777326/94‑1 (MQ=60)
                                                                                       CCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACG        >  SRR4302543.6778323/1‑94 (MQ=60)
                                                                                       CCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACG        >  SRR4302543.2964075/1‑94 (MQ=60)
                                                                                       CCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACG        <  SRR4302543.6369016/94‑1 (MQ=60)
                                                                                       CCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACG        <  SRR4302543.6358844/94‑1 (MQ=60)
                                                                                       CCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACG        >  SRR4302543.3414241/1‑94 (MQ=60)
                                                                                       CCTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACG        <  SRR4302543.4038118/94‑1 (MQ=60)
                                                                                       CCTGAGGGTTGGTCAGGACGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACG        <  SRR4302543.5256507/94‑1 (MQ=60)
                                                                                        CTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGCAGGTACGC       >  SRR4302543.3296850/1‑94 (MQ=60)
                                                                                        CTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGC       >  SRR4302543.3128577/1‑94 (MQ=60)
                                                                                        CTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGC       >  SRR4302543.1628103/1‑94 (MQ=60)
                                                                                        CTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGC       >  SRR4302543.5904720/1‑94 (MQ=60)
                                                                                        CTGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGC       >  SRR4302543.3259704/1‑94 (MQ=60)
                                                                                         TGAGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCA      >  SRR4302543.2741892/1‑94 (MQ=60)
                                                                                           AGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGC    >  SRR4302543.675113/1‑94 (MQ=60)
                                                                                           AGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGC    >  SRR4302543.4460336/1‑94 (MQ=60)
                                                                                           AGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGC    >  SRR4302543.563816/1‑94 (MQ=60)
                                                                                           AGGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGC    <  SRR4302543.6342207/94‑1 (MQ=60)
                                                                                            GGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGCA   >  SRR4302543.553484/1‑94 (MQ=60)
                                                                                            GGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGCA   >  SRR4302543.4215229/1‑94 (MQ=60)
                                                                                            GGGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGCA   <  SRR4302543.5881232/94‑1 (MQ=60)
                                                                                             GGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCAGGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGTAGCAG  >  SRR4302543.5397230/1‑94 (MQ=60)
                                                                                             GGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTCCAGTTCAAACATTTTtttaaagttaggaagagg  >  SRR4302543.6660101/1‑76 (MQ=60)
                                                                                             GGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGCAG  >  SRR4302543.5397229/1‑94 (MQ=60)
                                                                                             GGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGCAG  <  SRR4302543.2296494/94‑1 (MQ=60)
                                                                                             GGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGCAG  <  SRR4302543.4715420/94‑1 (MQ=60)
                                                                                             GGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGCAG  <  SRR4302543.5766288/94‑1 (MQ=60)
                                                                                             GGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGCAG  >  SRR4302543.6660100/1‑94 (MQ=60)
                                                                                             |                                                                                             
CAAAAGCGATGTTGTCGTAGATGGACATCGGAAACGGCGTCGGTTTCTGGAACACCATGCCCACTTTCGCACGCAGCAGTGCGATATCCTGAGAGTTGGTCAGGATGTTGTCGCCATCAAGCAGAATTTCACCTTCCGCACGCTGCTCCGGGTACAGTTCAAACATTTTGTTGAAGGTACGCAGCAG  >  NC_000913/3905655‑3905841

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑