Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,907,388 T→C E213E (GAA→GAG pstC ← PstC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,907,3880TC99.7% 1147.5 / ‑6.1 363E213E (GAA→GAGpstCPstC
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (175/186);  total (177/186)
Fisher's exact test for biased strand distribution p-value = 4.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 375 total aligned reads displayed.

CATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACTTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTA  >  NC_000913/3907298‑3907477
                                                                                          |                                                                                         
 aTGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTcc                                                                                        <  2:5329398/93‑1 (MQ=255)
     tttCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAgg                                                                                    <  1:2877602/93‑1 (MQ=255)
          ccGACCGCGCGCCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGgtggtg                                                                               <  2:1008482/93‑1 (MQ=255)
             aGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAg                                                                            >  1:2227983/1‑93 (MQ=255)
                gcgcgGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCa                                                                         <  1:6105615/93‑1 (MQ=255)
                 cgcgGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCaa                                                                        >  1:6831650/1‑93 (MQ=255)
                  gcgGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAAt                                                                       <  1:5289853/93‑1 (MQ=255)
                  gcgGCCAAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAAt                                                                       <  2:7122236/93‑1 (MQ=255)
                   cgGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATa                                                                      <  2:4043983/93‑1 (MQ=255)
                   cgGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATa                                                                      >  1:1970257/1‑93 (MQ=255)
                     gCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATAcc                                                                    <  1:5939627/93‑1 (MQ=255)
                      cccagccccagcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCg                                                                   <  2:2698231/93‑1 (MQ=255)
                        cagccccagcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTa                                                                 <  1:7907708/93‑1 (MQ=255)
                        cagccccagcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTa                                                                 <  1:4179877/93‑1 (MQ=255)
                        cagccccagcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTa                                                                 <  2:7343090/93‑1 (MQ=255)
                        cagccccagcATGATGCCGACGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTa                                                                 <  1:5069702/93‑1 (MQ=255)
                        cagccccagaATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTa                                                                 <  1:7306161/93‑1 (MQ=255)
                         agccccagcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAg                                                                <  2:3035046/93‑1 (MQ=255)
                         agccccagcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAg                                                                <  1:641621/93‑1 (MQ=255)
                          gccccagcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAgg                                                               <  1:6785351/93‑1 (MQ=255)
                           ccccagcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGc                                                              <  1:483200/93‑1 (MQ=255)
                            cccagcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGcc                                                             >  1:6926445/1‑93 (MQ=255)
                             ccagcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCg                                                            >  2:6809174/1‑93 (MQ=255)
                             ccagcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCg                                                            <  2:4975364/93‑1 (MQ=255)
                              cagcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCGCCCAGGTGGTGCAGCCAATACCGTAGGCCGa                                                           >  2:7699059/1‑93 (MQ=255)
                               agcATGATGCCGCCGATAACACGATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGAc                                                          >  2:5736054/1‑93 (MQ=255)
                               agcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGAc                                                          >  2:6617311/1‑93 (MQ=255)
                                gcATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGAct                                                         <  1:135346/93‑1 (MQ=255)
                                 cATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGActc                                                        <  2:2881800/93‑1 (MQ=255)
                                 cATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACATCCCAGGTGGTGCAGCCAATACCGTAGGCCGActc                                                        >  2:4322463/1‑93 (MQ=255)
                                  atgatgCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGActct                                                       <  2:5188861/93‑1 (MQ=255)
                                   tgatgCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCtt                                                      >  2:6414184/1‑93 (MQ=255)
                                   tgatgCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCtt                                                      <  2:6093768/93‑1 (MQ=255)
                                    gatgCCGCCGATAACCCCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCttt                                                     <  1:2376424/93‑1 (MQ=255)
                                    gatgCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCttt                                                     >  1:4962487/1‑93 (MQ=255)
                                     atgCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTtc                                                    <  2:7818269/93‑1 (MQ=255)
                                     atgCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTtc                                                    <  1:2668074/93‑1 (MQ=255)
                                     atgCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTtc                                                    <  1:198831/93‑1 (MQ=255)
                                      tgCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTtca                                                   >  1:2842559/1‑93 (MQ=255)
                                       gccgccGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTtcat                                                  >  2:3149481/1‑93 (MQ=255)
                                       gccgccGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTtcat                                                  >  1:7736801/1‑93 (MQ=255)
                                          gccgATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTtcatcat                                               <  2:6858897/93‑1 (MQ=255)
                                            cgATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTtcatcatca                                             >  1:2129829/1‑93 (MQ=255)
                                             gATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCAc                                            >  2:5619959/1‑93 (MQ=255)
                                              aTAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCAcc                                           <  2:758993/93‑1 (MQ=255)
                                               tAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCg                                          >  2:4801252/1‑93 (MQ=255)
                                                aaCACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCgg                                         <  2:2022857/93‑1 (MQ=255)
                                                 acacCATTTTTGTTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCggg                                        <  1:1261889/93‑1 (MQ=255)
                                                 acacCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCggg                                        >  2:6246484/1‑93 (MQ=255)
                                                 acacCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCggg                                        <  1:1094802/93‑1 (MQ=255)
                                                 acacCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCggg                                        <  1:317436/93‑1 (MQ=255)
                                                 acacCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCggg                                        >  1:5186675/1‑93 (MQ=255)
                                                 acacCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCggg                                        <  1:4677558/93‑1 (MQ=255)
                                                  cacCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCgggg                                       >  2:370769/1‑93 (MQ=255)
                                                  cacCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCgggg                                       <  1:4785708/93‑1 (MQ=255)
                                                   acCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGt                                      <  2:2179742/93‑1 (MQ=255)
                                                   acCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGt                                      >  2:1438005/1‑93 (MQ=255)
                                                     cATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGttt                                    <  1:1189874/93‑1 (MQ=255)
                                                     cATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGttt                                    >  1:6569463/1‑93 (MQ=255)
                                                      aTTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTg                                   <  1:3357484/93‑1 (MQ=255)
                                                       tttttGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGt                                  >  2:6565689/1‑93 (MQ=255)
                                                       tttttGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGt                                  <  1:1447107/93‑1 (MQ=255)
                                                       tttttGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGt                                  >  2:5840766/1‑93 (MQ=255)
                                                        ttttGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGtt                                 <  1:4457746/93‑1 (MQ=255)
                                                          ttGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCg                               <  1:1011289/93‑1 (MQ=255)
                                                             gTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAac                            <  2:5932499/93‑1 (MQ=255)
                                                               gAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAacaa                          >  1:2026172/1‑92 (MQ=255)
                                                                aaCGGAAGAACGATACGCCAGATAGCCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAAcaca                         <  2:3270873/93‑1 (MQ=255)
                                                                 aCGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACAt                        <  1:3233005/93‑1 (MQ=255)
                                                                 aCGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACAt                        <  1:5475132/93‑1 (MQ=255)
                                                                  cGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATc                       <  2:1125004/93‑1 (MQ=255)
                                                                  cGGAAGAACGATACGCCAGATAACCCCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATc                       <  1:1777903/93‑1 (MQ=255)
                                                                   ggAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCa                      <  2:3509549/93‑1 (MQ=255)
                                                                   ggAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCa                      <  2:2377735/93‑1 (MQ=255)
                                                                    gaagaaCGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCAc                     >  2:1786990/1‑93 (MQ=255)
                                                                    gaagaaCGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCAc                     <  1:3998810/93‑1 (MQ=255)
                                                                     aagaaCGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACg                    <  1:349150/93‑1 (MQ=255)
                                                                       gaaCGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATATCGTATGCCGACTTTTTCTTCATCACAGGGGTTTGTTCGAACACATCACGCa                  >  1:5724708/1‑93 (MQ=255)
                                                                       gaaCGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCa                  <  2:2227982/93‑1 (MQ=255)
                                                                       gaaCGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCa                  <  2:5367340/93‑1 (MQ=255)
                                                                        aaCGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCAt                 <  1:7388018/93‑1 (MQ=255)
                                                                        aaCGATACGCCAGATAACCTCCCAGGTGGTGCAACCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCAt                 <  1:7625336/93‑1 (MQ=255)
                                                                         aCGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCAtt                <  1:84207/93‑1 (MQ=255)
                                                                         aCGATACGCCAGATAACCTCCCAGGTGGGGGAGCCAATACCGCAGGGCGACTTTTTAATCTTCACCCGGGTTTGTTTGTCCACATCACGCact                >  2:1597324/1‑91 (MQ=255)
                                                                          cGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCTACTCTTGCATCATCACCGGGGTTTGTTCGAACACATCACGCAttt               <  2:3927721/93‑2 (MQ=255)
                                                                           gATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTAc              <  1:5603646/93‑1 (MQ=255)
                                                                           gATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTAc              <  2:2502467/93‑1 (MQ=255)
                                                                                 ccAGATAACCTCCCAGGTGGTGCAGCCAATTCCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTCCcgccgc        <  2:4765769/93‑1 (MQ=255)
                                                                                  cAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCa       >  1:1704950/1‑93 (MQ=255)
                                                                                   aGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCaa      >  1:4250225/1‑93 (MQ=255)
                                                                                   aGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCaa      >  1:2589318/1‑93 (MQ=255)
                                                                                    gATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTATCGCCGCAAt     >  2:2537776/1‑93 (MQ=255)
                                                                                    gATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAAt     <  2:458381/93‑1 (MQ=255)
                                                                                     aTAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATg    >  2:1322793/1‑93 (MQ=255)
                                                                                      tAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGt   <  2:1555393/93‑1 (MQ=255)
                                                                                      tAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGt   >  2:815592/1‑93 (MQ=255)
                                                                                       aaCCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTa  <  1:3749864/93‑1 (MQ=255)
                                                                                       aaCCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTa  <  2:5445696/93‑1 (MQ=255)
                                                                                       aaCCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTa  <  1:6222016/93‑1 (MQ=255)
                                                                                       aaCCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTa  >  1:7165408/1‑93 (MQ=255)
                                                                                          |                                                                                         
CATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACTTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTA  >  NC_000913/3907298‑3907477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 211 total aligned reads displayed.
CGCCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACTTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTACGGA  >  NC_000913/3907295‑3907481
                                                                                             |                                                                                             
CGCCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACC                                                                                               <  SRR4302543.351740/94‑1 (MQ=60)
CGCCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACC                                                                                               <  SRR4302543.351739/94‑1 (MQ=60)
CGCCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACC                                                                                               >  SRR4302543.7420541/1‑94 (MQ=60)
CGCCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACC                                                                                               >  SRR4302543.6538125/1‑94 (MQ=60)
 GCCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCT                                                                                              >  SRR4302543.6546685/1‑94 (MQ=60)
  CCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTC                                                                                             >  SRR4302543.3421318/1‑94 (MQ=60)
  CCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTC                                                                                             >  SRR4302543.3024041/1‑94 (MQ=60)
  CCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTC                                                                                             >  SRR4302543.6112982/1‑94 (MQ=60)
   CATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCC                                                                                            >  SRR4302543.419398/1‑94 (MQ=60)
   CATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCC                                                                                            >  SRR4302543.5021350/1‑94 (MQ=60)
    ATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCC                                                                                           >  SRR4302543.6761481/1‑94 (MQ=60)
    ATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCC                                                                                           >  SRR4302543.2987117/1‑94 (MQ=60)
    ATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCC                                                                                           <  SRR4302543.2792358/94‑1 (MQ=60)
      GGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAG                                                                                         <  SRR4302543.6959566/94‑1 (MQ=60)
       GTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGG                                                                                        >  SRR4302543.1039533/1‑94 (MQ=60)
       GTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGG                                                                                        >  SRR4302543.7672098/1‑94 (MQ=60)
        TTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGT                                                                                       <  SRR4302543.2903789/94‑1 (MQ=60)
        TTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGT                                                                                       <  SRR4302543.5191218/94‑1 (MQ=60)
        TTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGG                                                                                       >  SRR4302543.7158191/1‑94 (MQ=60)
         TTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTG                                                                                      >  SRR4302543.6575419/1‑94 (MQ=60)
         TTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTG                                                                                      <  SRR4302543.1187244/94‑1 (MQ=60)
         TGCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGGAGAACGATACGCCAGATAACCTCCCAGGTG                                                                                      <  SRR4302543.6041908/94‑1 (MQ=60)
         TCCACCGACCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAAACTCCCAGGTG                                                                                      <  SRR4302543.1437990/94‑1 (MQ=60)
          TCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGG                                                                                     <  SRR4302543.122929/94‑1 (MQ=60)
           CACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGT                                                                                    >  SRR4302543.1283480/1‑94 (MQ=60)
            ACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTG                                                                                   <  SRR4302543.2127059/94‑1 (MQ=60)
             CCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGCACGATACGCCAGATAACCTCCCAGGTGGTGC                                                                                  >  SRR4302543.7468525/1‑94 (MQ=60)
              CGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCA                                                                                 >  SRR4302543.7437629/1‑94 (MQ=60)
               GAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAG                                                                                >  SRR4302543.2248101/1‑94 (MQ=60)
                AGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGC                                                                               >  SRR4302543.6230212/1‑94 (MQ=60)
                 GCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCC                                                                              <  SRR4302543.3947445/94‑1 (MQ=60)
                 GCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCC                                                                              <  SRR4302543.3386927/94‑1 (MQ=60)
                  CGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCA                                                                             >  SRR4302543.3206968/1‑94 (MQ=60)
                   GCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAA                                                                            <  SRR4302543.6163461/94‑1 (MQ=60)
                   GCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAA                                                                            >  SRR4302543.6896145/1‑94 (MQ=60)
                    CGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAAT                                                                           <  SRR4302543.2666826/94‑1 (MQ=60)
                     GCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATA                                                                          >  SRR4302543.1987915/1‑94 (MQ=60)
                     GCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATA                                                                          <  SRR4302543.5337606/94‑1 (MQ=60)
                     GCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATA                                                                          >  SRR4302543.288221/1‑94 (MQ=60)
                      CGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATAC                                                                         <  SRR4302543.1998784/94‑1 (MQ=60)
                       GGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACC                                                                        <  SRR4302543.4742707/94‑1 (MQ=60)
                       GGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACC                                                                        >  SRR4302543.6408582/1‑94 (MQ=60)
                        GCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCG                                                                       <  SRR4302543.4819610/94‑1 (MQ=60)
                        GCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCG                                                                       <  SRR4302543.5993971/94‑1 (MQ=60)
                        GCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCG                                                                       <  SRR4302543.4482479/94‑1 (MQ=60)
                         CCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGT                                                                      >  SRR4302543.7270402/1‑94 (MQ=60)
                          CCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTA                                                                     >  SRR4302543.3661087/1‑94 (MQ=60)
                          CCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTA                                                                     >  SRR4302543.33683/1‑94 (MQ=60)
                           CAGCCCCAGCATGATGCCGCGGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAG                                                                    <  SRR4302543.1986424/94‑1 (MQ=60)
                           CAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAG                                                                    <  SRR4302543.7982012/94‑1 (MQ=60)
                           CAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAG                                                                    <  SRR4302543.4217751/94‑1 (MQ=60)
                           CAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAG                                                                    <  SRR4302543.2640547/94‑1 (MQ=60)
                           CAGCCCCAGCATGATGCCGACGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAG                                                                    <  SRR4302543.5115719/94‑1 (MQ=60)
                           CAGCCCCAGAATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAG                                                                    <  SRR4302543.7376606/94‑1 (MQ=60)
                            AGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGG                                                                   <  SRR4302543.647480/94‑1 (MQ=60)
                            AGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGG                                                                   <  SRR4302543.4234334/94‑1 (MQ=60)
                             GCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGC                                                                  <  SRR4302543.6849431/94‑1 (MQ=60)
                             GCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGC                                                                  <  SRR4302543.6849430/94‑1 (MQ=60)
                              CCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCC                                                                 >  SRR4302543.6991571/1‑94 (MQ=60)
                              CCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCC                                                                 <  SRR4302543.487663/94‑1 (MQ=60)
                               CCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCG                                                                >  SRR4302543.4317883/1‑94 (MQ=60)
                                CCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGC                                                               >  SRR4302543.2147992/1‑94 (MQ=60)
                                 CAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGAC                                                              >  SRR4302543.4781439/1‑94 (MQ=60)
                                  AGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACT                                                             >  SRR4302543.2027068/1‑94 (MQ=60)
                                   GCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTC                                                            >  SRR4302543.1963619/1‑94 (MQ=60)
                                   GCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTC                                                            <  SRR4302543.136543/94‑1 (MQ=60)
                                   GCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTC                                                            >  SRR4302543.926391/1‑94 (MQ=60)
                                   GCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCCCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTC                                                            <  SRR4302543.7421866/94‑1 (MQ=60)
                                    CATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCT                                                           >  SRR4302543.1316316/1‑94 (MQ=60)
                                     ATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTT                                                          >  SRR4302543.5720908/1‑94 (MQ=60)
                                     ATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTT                                                          >  SRR4302543.5529749/1‑94 (MQ=60)
                                     ATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTT                                                          >  SRR4302543.3573707/1‑94 (MQ=60)
                                      TGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTT                                                         >  SRR4302543.5007662/1‑94 (MQ=60)
                                      TGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTT                                                         >  SRR4302543.1229765/1‑94 (MQ=60)
                                       GATGCCGCCGATAACCCCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTC                                                        <  SRR4302543.2397951/94‑1 (MQ=60)
                                        ATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCA                                                       >  SRR4302543.2868531/1‑94 (MQ=60)
                                        ATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCA                                                       <  SRR4302543.1076001/94‑1 (MQ=60)
                                        ATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCA                                                       <  SRR4302543.200511/94‑1 (MQ=60)
                                        ATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCA                                                       <  SRR4302543.2692264/94‑1 (MQ=60)
                                         TGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCAT                                                      >  SRR4302543.7809901/1‑94 (MQ=60)
                                          GCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATC                                                     <  SRR4302543.5867861/94‑1 (MQ=60)
                                           CCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCA                                                    >  SRR4302543.471390/1‑94 (MQ=60)
                                           CCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCA                                                    <  SRR4302543.6972792/94‑1 (MQ=60)
                                           CCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCA                                                    <  SRR4302543.6699909/94‑1 (MQ=60)
                                           CCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCA                                                    <  SRR4302543.541369/94‑1 (MQ=60)
                                           CCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCA                                                    <  SRR4302543.2233386/94‑1 (MQ=60)
                                           CCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCA                                                    <  SRR4302543.2701570/94‑1 (MQ=60)
                                            CGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCAT                                                   <  SRR4302543.4945821/94‑1 (MQ=60)
                                             GCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATC                                                  >  SRR4302543.7409874/1‑94 (MQ=60)
                                              CCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCA                                                 >  SRR4302543.2148897/1‑94 (MQ=60)
                                              CCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCA                                                 >  SRR4302543.1313595/1‑94 (MQ=60)
                                              CCGATAACACCATTTTTGGTGAACGGAAAAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCA                                                 >  SRR4302543.826548/1‑94 (MQ=60)
                                               CGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCAC                                                >  SRR4302543.5162085/1‑94 (MQ=60)
                                               CGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCAC                                                >  SRR4302543.3143128/1‑94 (MQ=60)
                                               CGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCAC                                                >  SRR4302543.1662732/1‑94 (MQ=60)
                                               CGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCAC                                                >  SRR4302543.241873/1‑94 (MQ=60)
                                                GATAACACCATTTTTGGTGAACGGAAGAACGATACTCCAGATAACCTCCCAGGTGGTGCAGCCAATAACGTAGGCCGACTCTTTCATCATCACC                                               >  SRR4302543.1401791/1‑94 (MQ=60)
                                                 ATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCG                                              <  SRR4302543.843422/94‑1 (MQ=60)
                                                 ATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCG                                              >  SRR4302543.1857559/1‑94 (MQ=60)
                                                 ATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCG                                              <  SRR4302543.4654319/94‑1 (MQ=60)
                                                  TAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGG                                             <  SRR4302543.6949073/94‑1 (MQ=60)
                                                   AACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGG                                            >  SRR4302543.5233467/1‑94 (MQ=60)
                                                   AACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGG                                            <  SRR4302543.2152343/94‑1 (MQ=60)
                                                    ACACCATTTTTGTTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGG                                           <  SRR4302543.1273185/94‑1 (MQ=60)
                                                    ACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGG                                           <  SRR4302543.1104652/94‑1 (MQ=60)
                                                    ACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGG                                           >  SRR4302543.5270427/1‑94 (MQ=60)
                                                    ACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGG                                           <  SRR4302543.4720200/94‑1 (MQ=60)
                                                    ACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGG                                           <  SRR4302543.3806231/94‑1 (MQ=60)
                                                    ACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGG                                           <  SRR4302543.320303/94‑1 (MQ=60)
                                                     CACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGT                                          <  SRR4302543.4829454/94‑1 (MQ=60)
                                                      ACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTT                                         >  SRR4302543.2241588/1‑94 (MQ=60)
                                                      ACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTT                                         <  SRR4302543.4862357/94‑1 (MQ=60)
                                                       CCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTT                                        <  SRR4302543.2359663/94‑1 (MQ=60)
                                                       CCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTT                                        >  SRR4302543.6631310/1‑94 (MQ=60)
                                                        CATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTNGTGCAGCCAATNCCGTAGGCCNANNNNTTNANCATCANCNNGNTNNN                                       >  SRR4302543.1783130/1‑94 (MQ=60)
                                                        CATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTG                                       <  SRR4302543.5522910/94‑1 (MQ=60)
                                                        CATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTG                                       <  SRR4302543.7968648/94‑1 (MQ=60)
                                                        CATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTG                                       <  SRR4302543.1712400/94‑1 (MQ=60)
                                                        CATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTG                                       <  SRR4302543.1200605/94‑1 (MQ=60)
                                                         ATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGT                                      <  SRR4302543.3387692/94‑1 (MQ=60)
                                                         ATTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGT                                      >  SRR4302543.5571012/1‑94 (MQ=60)
                                                          TTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTT                                     <  SRR4302543.5979740/94‑1 (MQ=60)
                                                          TTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTT                                     <  SRR4302543.1460183/94‑1 (MQ=60)
                                                          TTTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTT                                     <  SRR4302543.5619394/94‑1 (MQ=60)
                                                           TTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTC                                    <  SRR4302543.1725303/94‑1 (MQ=60)
                                                           TTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTC                                    <  SRR4302543.4498141/94‑1 (MQ=60)
                                                           TTTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTC                                    <  SRR4302543.753363/94‑1 (MQ=60)
                                                            TTTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCG                                   >  SRR4302543.3477772/1‑94 (MQ=60)
                                                             TTGGTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGA                                  <  SRR4302543.1020237/94‑1 (MQ=60)
                                                                GTGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACA                               >  SRR4302543.633909/1‑94 (MQ=60)
                                                                 TGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACAC                              >  SRR4302543.7808877/1‑94 (MQ=60)
                                                                 TGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACAC                              <  SRR4302543.7868834/94‑1 (MQ=60)
                                                                 TGAACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACAA                              >  SRR4302543.2044380/1‑94 (MQ=60)
                                                                    ACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATC                           <  SRR4302543.5524743/94‑1 (MQ=60)
                                                                    ACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATC                           <  SRR4302543.565567/94‑1 (MQ=60)
                                                                    ACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATC                           <  SRR4302543.3262250/94‑1 (MQ=60)
                                                                    ACGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATC                           <  SRR4302543.7224769/94‑1 (MQ=60)
                                                                    ACGGAAGAACGATACGCAAAATACCCTCCCAGGTGGTCCGGCCAATACCTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCA                          <  SRR4302543.7992465/94‑1 (MQ=60)
                                                                     CGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCcccggaacggcccgcaacgcgcag                          <  SRR4302543.5250890/94‑25 (MQ=60)
                                                                     CGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCA                          >  SRR4302543.2882687/1‑94 (MQ=60)
                                                                     CGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCA                          >  SRR4302543.4263420/1‑94 (MQ=60)
                                                                     CGGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCA                          <  SRR4302543.2270700/94‑1 (MQ=60)
                                                                     CGGAAGAACGATACGCCAGATAACCCCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCA                          <  SRR4302543.1793786/94‑1 (MQ=60)
                                                                      GGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCAC                         <  SRR4302543.7258570/94‑1 (MQ=60)
                                                                      GGAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCAC                         >  SRR4302543.4939382/1‑94 (MQ=60)
                                                                       GAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACG                        >  SRR4302543.2477992/1‑94 (MQ=60)
                                                                       GAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACG                        <  SRR4302543.1727080/94‑1 (MQ=60)
                                                                       GAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACG                        <  SRR4302543.5301187/94‑1 (MQ=60)
                                                                       GAAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACG                        <  SRR4302543.4152143/94‑1 (MQ=60)
                                                                        AAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGC                       >  SRR4302543.414987/1‑94 (MQ=60)
                                                                        AAGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGC                       <  SRR4302543.352380/94‑1 (MQ=60)
                                                                         AGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATATCGTATGCCGACTTTTTCTTCATCACAGGGGTTTGTTCGAACACATCACGCA                      >  SRR4302543.5776947/1‑94 (MQ=60)
                                                                         AGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCT                      >  SRR4302543.6882989/1‑94 (MQ=60)
                                                                         AGAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCA                      <  SRR4302543.355043/94‑1 (MQ=60)
                                                                          GAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCAT                     >  SRR4302543.849970/1‑94 (MQ=60)
                                                                          GAACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCAT                     <  SRR4302543.3207614/94‑1 (MQ=60)
                                                                           AACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATT                    >  SRR4302543.4899913/1‑94 (MQ=60)
                                                                           AACGATACGCCAGATAACCTCCCAGGTGGTGCAACCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATT                    <  SRR4302543.7697696/94‑1 (MQ=60)
                                                                            ACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTA                   <  SRR4302543.4648903/94‑1 (MQ=60)
                                                                            ACGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTA                   <  SRR4302543.84983/94‑1 (MQ=60)
                                                                             CGATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTAC                  >  SRR4302543.12181/1‑94 (MQ=60)
                                                                              GATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACC                 >  SRR4302543.5185457/1‑94 (MQ=60)
                                                                              GATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACC                 >  SRR4302543.1140909/1‑94 (MQ=60)
                                                                              GATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACC                 <  SRR4302543.5654705/94‑1 (MQ=60)
                                                                              GATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACC                 <  SRR4302543.6257677/94‑1 (MQ=60)
                                                                              CATACGCCAGATAACCCCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACC                 <  SRR4302543.2007016/94‑1 (MQ=60)
                                                                               ATACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCG                <  SRR4302543.5018842/94‑1 (MQ=60)
                                                                               ATACGCCAGATAACCGCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCG                <  SRR4302543.3304470/94‑1 (MQ=60)
                                                                                TACGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGC               >  SRR4302543.5715740/1‑94 (MQ=60)
                                                                                  CGCCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGGCTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCG             <  SRR4302543.617975/94‑1 (MQ=60)
                                                                                    CCAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCA           >  SRR4302543.1720218/1‑94 (MQ=60)
                                                                                     CAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAA          >  SRR4302543.3804418/1‑94 (MQ=60)
                                                                                     CAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAA          >  SRR4302543.4288796/1‑94 (MQ=60)
                                                                                     CAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAA          >  SRR4302543.2612860/1‑94 (MQ=60)
                                                                                     CAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAA          >  SRR4302543.2139658/1‑94 (MQ=60)
                                                                                     CAGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAA          >  SRR4302543.1134728/1‑94 (MQ=60)
                                                                                      AGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAAT         >  SRR4302543.7327714/1‑94 (MQ=60)
                                                                                      AGATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAAT         >  SRR4302543.5110903/1‑94 (MQ=60)
                                                                                       GATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATG        <  SRR4302543.1784018/94‑1 (MQ=60)
                                                                                       GATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATG        <  SRR4302543.7874760/94‑1 (MQ=60)
                                                                                       GATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATG        <  SRR4302543.7792567/94‑1 (MQ=60)
                                                                                        ATAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGCTTGTTCGAACACATCACGCATTACCGCCGCAATta       >  SRR4302543.4400816/1‑92 (MQ=60)
                                                                                         TAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTA      <  SRR4302543.2774680/94‑1 (MQ=60)
                                                                                         TAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTA      >  SRR4302543.7235007/1‑94 (MQ=60)
                                                                                         TAACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTA      <  SRR4302543.6680132/94‑1 (MQ=60)
                                                                                          AACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTAC     <  SRR4302543.6280750/94‑1 (MQ=60)
                                                                                          AACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTAC     <  SRR4302543.3782859/94‑1 (MQ=60)
                                                                                          AACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTAC     <  SRR4302543.1996673/94‑1 (MQ=60)
                                                                                          AACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTAC     <  SRR4302543.6530428/94‑1 (MQ=60)
                                                                                           ACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTACG    >  SRR4302543.1640003/1‑94 (MQ=60)
                                                                                           ACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTACG    <  SRR4302543.2083478/94‑1 (MQ=60)
                                                                                           ACCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTACG    <  SRR4302543.3818607/94‑1 (MQ=60)
                                                                                            CCTCCCAGGTGGTTCAGCCAATACCGTAGTCCCACTCTTTCATCATCACCGGGGTTTGTTCTAACACATCACGCATTACCGCCGCAATGTACGG   <  SRR4302543.2800065/94‑1 (MQ=60)
                                                                                            CCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTACGG   >  SRR4302543.7027279/1‑94 (MQ=60)
                                                                                            CCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTACGG   <  SRR4302543.2799828/94‑1 (MQ=60)
                                                                                            CCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTACGG   <  SRR4302543.2305484/94‑1 (MQ=60)
                                                                                            CCTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTACGG   <  SRR4302543.3053683/94‑1 (MQ=60)
                                                                                             CTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTACGGA  >  SRR4302543.538327/1‑94 (MQ=60)
                                                                                             CTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTACGGA  >  SRR4302543.5672058/1‑94 (MQ=60)
                                                                                             CTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTACGGA  <  SRR4302543.7600539/94‑1 (MQ=60)
                                                                                             |                                                                                             
CGCCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCATGATGCCGCCGATAACACCATTTTTGGTGAACGGAAGAACGATACGCCAGATAACTTCCCAGGTGGTGCAGCCAATACCGTAGGCCGACTCTTTCATCATCACCGGGGTTTGTTCGAACACATCACGCATTACCGCCGCAATGTACGGA  >  NC_000913/3907295‑3907481

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: