Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,911,249 G→A I16I (ATC→ATT)  glmS ← L‑glutamine:D‑fructose‑6‑phosphate aminotransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,911,2490GA99.3% 1576.1 / ‑3.7 437I16I (ATC→ATT) glmSL‑glutamine:D‑fructose‑6‑phosphate aminotransferase
Reads supporting (aligned to +/- strand):  ref base G (2/1);  new base A (191/243);  total (193/244)
Fisher's exact test for biased strand distribution p-value = 5.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.24e-01

Only 100 of 455 total aligned reads displayed.

CAGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGGATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTAT  >  NC_000913/3911159‑3911338
                                                                                          |                                                                                         
  ggCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAAttt                                                                                       <  1:3121125/93‑1 (MQ=255)
  ggCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAAttt                                                                                       >  2:1690082/1‑93 (MQ=255)
  ggCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAAttt                                                                                       <  1:2525090/93‑1 (MQ=255)
    cGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCt                                                                                     <  1:5429898/93‑1 (MQ=255)
      ggTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGc                                                                                   <  1:68253/93‑1 (MQ=255)
      ggTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGc                                                                                   <  2:2059581/93‑1 (MQ=255)
       gTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCt                                                                                  >  2:2412516/1‑93 (MQ=255)
       gTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCt                                                                                  <  2:7145223/93‑1 (MQ=255)
        tCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTa                                                                                 >  2:3303632/1‑93 (MQ=255)
           tatGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACAt                                                                              <  2:2140007/93‑1 (MQ=255)
           tatGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACAt                                                                              >  1:20124/1‑93 (MQ=255)
           tatGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACAt                                                                              >  2:6561148/1‑93 (MQ=255)
            atGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATc                                                                             >  2:104912/1‑93 (MQ=255)
             tGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCa                                                                            >  1:1704435/1‑93 (MQ=255)
              gACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCAc                                                                           >  1:4888481/1‑93 (MQ=255)
              gACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCAc                                                                           <  1:7599496/93‑1 (MQ=255)
               aCCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAACACTTCAAGAAGGATTTCTGCTACATCACg                                                                          >  1:3175903/1‑93 (MQ=255)
               aCCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACg                                                                          >  2:1462713/1‑93 (MQ=255)
                ccTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGt                                                                         <  1:6126272/93‑1 (MQ=255)
                 cTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGtt                                                                        >  1:1552749/1‑93 (MQ=255)
                  ttCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTg                                                                       >  1:1037304/1‑93 (MQ=255)
                  ttCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTg                                                                       >  2:5757559/1‑93 (MQ=255)
                  ttCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTg                                                                       <  2:1969940/93‑1 (MQ=255)
                  ttCTGCATCAACAACGGCCAGACCGGCAGAGGCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTg                                                                       >  2:5646266/1‑93 (MQ=255)
                       cATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGa                                                                  <  1:3421928/93‑1 (MQ=255)
                         tCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATc                                                                >  1:968108/1‑93 (MQ=255)
                         tCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATc                                                                >  1:7100356/1‑93 (MQ=255)
                         tCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCCCGATc                                                                >  1:2436210/1‑93 (MQ=255)
                          caacaaCGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATcg                                                               >  1:4252724/1‑93 (MQ=255)
                           aacaacGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATcgc                                                              <  2:5458815/93‑1 (MQ=255)
                           aacaacGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATcgc                                                              >  2:6237971/1‑93 (MQ=255)
                             caacGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCgcgc                                                            <  2:4402461/93‑1 (MQ=255)
                              aacGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGcc                                                           <  1:4785585/93‑1 (MQ=255)
                               acGGCCAGACCGGCAGAGGCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCca                                                          >  1:6599039/1‑93 (MQ=255)
                                cGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCcaa                                                         <  1:5213248/93‑1 (MQ=255)
                                 ggCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCcaac                                                        >  2:3710722/1‑93 (MQ=255)
                                  gCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCcaaca                                                       >  1:1333485/1‑93 (MQ=255)
                                   ccAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCcaacaa                                                      <  2:5322444/93‑1 (MQ=255)
                                    cAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAAt                                                     <  1:3870040/93‑1 (MQ=255)
                                    cAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAAt                                                     <  1:4415547/93‑1 (MQ=255)
                                      gACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTc                                                   >  1:1856800/1‑93 (MQ=255)
                                           gCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCcacac                                              >  1:3735512/1‑93 (MQ=255)
                                            cAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCcacaca                                             <  1:5786692/93‑1 (MQ=255)
                                            cAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCcacaca                                             <  2:2192260/93‑1 (MQ=255)
                                             agagTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACAt                                            >  2:6462278/1‑93 (MQ=255)
                                             agagTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACAt                                            >  1:5940645/1‑93 (MQ=255)
                                              gagTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATa                                           >  1:1210571/1‑93 (MQ=255)
                                              gagTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATa                                           <  2:2764594/93‑1 (MQ=255)
                                              gagTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATa                                           >  2:7918542/1‑93 (MQ=255)
                                               agTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAg                                          >  1:4061936/1‑93 (MQ=255)
                                               agTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAg                                          <  2:4511771/93‑1 (MQ=255)
                                               agTCATACCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAg                                          <  1:7203795/93‑1 (MQ=255)
                                                  cATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGttt                                       <  2:305778/93‑1 (MQ=255)
                                                   atatCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGtttt                                      <  2:5887769/93‑1 (MQ=255)
                                                   atatCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGtttt                                      >  1:1648260/1‑93 (MQ=255)
                                                   atatCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGtttt                                      >  1:5334168/1‑93 (MQ=255)
                                                   atatCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGtttt                                      <  1:7908887/93‑1 (MQ=255)
                                                    tatCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGttttt                                     <  1:6274701/93‑1 (MQ=255)
                                                     atCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTg                                    <  2:7054482/93‑1 (MQ=255)
                                                      tCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGa                                   <  2:3923924/93‑1 (MQ=255)
                                                      tCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGa                                   >  1:3528695/1‑93 (MQ=255)
                                                       ccGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGAt                                  <  1:2725011/93‑1 (MQ=255)
                                                       ccGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGAt                                  <  1:7691122/93‑1 (MQ=255)
                                                         gcgGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTc                                >  2:6858891/1‑93 (MQ=255)
                                                         gcgGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTc                                <  1:7314489/93‑1 (MQ=255)
                                                           ggTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCg                              >  1:5483337/1‑93 (MQ=255)
                                                            gTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGa                             <  1:2931542/93‑1 (MQ=255)
                                                            gTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGa                             >  1:6936862/1‑93 (MQ=255)
                                                              aTTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGAtt                           >  2:2358536/1‑93 (MQ=255)
                                                               ttCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGCttt                          >  1:5071379/1‑93 (MQ=255)
                                                               ttCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGAttt                          >  1:6486390/1‑93 (MQ=255)
                                                                tCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTta                         <  1:2136812/93‑1 (MQ=255)
                                                                tCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTta                         <  2:4810191/93‑1 (MQ=255)
                                                                   aGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTatat                      <  2:4987396/93‑1 (MQ=255)
                                                                   aGACGACGTAAACCTGCAAGAAGAATCTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTatat                      <  1:1126304/93‑1 (MQ=255)
                                                                    gacgacGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATc                     >  2:4598798/1‑93 (MQ=255)
                                                                    gacgacGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATc                     <  1:3659189/93‑1 (MQ=255)
                                                                       gacgTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGtt                  <  2:3427379/93‑1 (MQ=255)
                                                                       gacgTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGtt                  <  2:5206140/93‑1 (MQ=255)
                                                                       gacgTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGtt                  >  1:7848887/1‑93 (MQ=255)
                                                                       gacgTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGtt                  >  2:6082768/1‑93 (MQ=255)
                                                                        acgTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTg                 <  2:1399151/93‑1 (MQ=255)
                                                                         cgTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGt                <  1:3067806/93‑1 (MQ=255)
                                                                         cgTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGt                <  2:1272641/93‑1 (MQ=255)
                                                                          gTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTc               >  1:5595619/1‑93 (MQ=255)
                                                                           tAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCg              <  1:670137/93‑1 (MQ=255)
                                                                             aaCCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACGTAGTTTTTGATTCCGATTTATATCGTTGTCGGt            >  2:2916451/1‑93 (MQ=255)
                                                                             aaCCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGt            <  2:4159770/93‑1 (MQ=255)
                                                                              aCCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCAAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTc           <  1:147628/93‑1 (MQ=255)
                                                                                 ttCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAAc        >  1:7417253/1‑93 (MQ=255)
                                                                                 ttCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAAc        >  1:7501677/1‑93 (MQ=255)
                                                                                 ttCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAAc        >  2:7433647/1‑93 (MQ=255)
                                                                                 ttCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGCTTTTGATTCCGATTTATATCGTTGTCGGTCAAc        >  2:1170729/1‑93 (MQ=255)
                                                                                  tCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAAcc       <  1:3920815/93‑1 (MQ=255)
                                                                                  tCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAAcc       >  2:7683262/1‑93 (MQ=255)
                                                                                   cAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCt      <  2:3263170/93‑1 (MQ=255)
                                                                                      gaagaaTTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTa   <  2:6755275/93‑1 (MQ=255)
                                                                                      gaagaaTTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTa   <  1:3275478/93‑1 (MQ=255)
                                                                                      gaagaaTTTCTGCTACATCACGTCGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTa   <  2:4297722/93‑1 (MQ=255)
                                                                                       aagAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTAt  >  1:4584884/1‑93 (MQ=255)
                                                                                          |                                                                                         
CAGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGGATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTAT  >  NC_000913/3911159‑3911338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 271 total aligned reads displayed.
ACGCAGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGGATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTATGCCC  >  NC_000913/3911156‑3911342
                                                                                             |                                                                                             
ACGCAGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGA                                                                                               <  SRR4302543.2004627/94‑1 (MQ=60)
 CGCAGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAA                                                                                              <  SRR4302543.4430913/94‑1 (MQ=60)
  GCAGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAAT                                                                                             <  SRR4302543.1644906/94‑1 (MQ=60)
  GCAGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAAT                                                                                             <  SRR4302543.5880100/94‑1 (MQ=60)
  GCAGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAAT                                                                                             >  SRR4302543.2512637/1‑94 (MQ=60)
   CAGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATT                                                                                            <  SRR4302543.3151245/94‑1 (MQ=60)
    AGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTT                                                                                           >  SRR4302543.7543451/1‑94 (MQ=60)
    AGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTT                                                                                           >  SRR4302543.5855381/1‑94 (MQ=60)
    AGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTT                                                                                           <  SRR4302543.2601250/94‑1 (MQ=60)
    AGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTT                                                                                           <  SRR4302543.6958472/94‑1 (MQ=60)
     GGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTC                                                                                          <  SRR4302543.3149196/94‑1 (MQ=60)
     GGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTC                                                                                          <  SRR4302543.5740384/94‑1 (MQ=60)
     GGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTC                                                                                          <  SRR4302543.2548055/94‑1 (MQ=60)
     GGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTC                                                                                          <  SRR4302543.6819993/94‑1 (MQ=60)
      GCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCT                                                                                         <  SRR4302543.6221386/94‑1 (MQ=60)
      GCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCT                                                                                         <  SRR4302543.7290494/94‑1 (MQ=60)
       CGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTG                                                                                        <  SRR4302543.5479235/94‑1 (MQ=60)
       CGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTG                                                                                        >  SRR4302543.3412777/1‑94 (MQ=60)
        GGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGC                                                                                       <  SRR4302543.345467/94‑1 (MQ=60)
         GGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCT                                                                                      >  SRR4302543.2098013/1‑94 (MQ=60)
         GGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCT                                                                                      >  SRR4302543.3940056/1‑94 (MQ=60)
         GGTCATATGACCTTCTGCATCAACAACGGACAGACCGGCAGAGTCATATCCGCGGAATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCT                                                                                      >  SRR4302543.4076479/1‑94 (MQ=60)
          GTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTA                                                                                     <  SRR4302543.906445/94‑1 (MQ=60)
          GGCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCTGACGACGTAAACCATCAAGAAGAATTTCTGCTA                                                                                     >  SRR4302543.7086055/1‑94 (MQ=60)
           TCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTAC                                                                                    >  SRR4302543.2134368/1‑94 (MQ=60)
           TCATATGACCTTCTGCATCAACAACAGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTAC                                                                                    <  SRR4302543.6219821/94‑1 (MQ=60)
            CATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACA                                                                                   >  SRR4302543.4331930/1‑94 (MQ=60)
             ATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACAT                                                                                  <  SRR4302543.3762540/94‑1 (MQ=60)
             ATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACAT                                                                                  <  SRR4302543.3008949/94‑1 (MQ=60)
             ATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACAT                                                                                  >  SRR4302543.4607442/1‑94 (MQ=60)
             ATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACAT                                                                                  >  SRR4302543.20311/1‑94 (MQ=60)
               ATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCA                                                                                <  SRR4302543.2895923/94‑1 (MQ=60)
               ATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCA                                                                                >  SRR4302543.1719700/1‑94 (MQ=60)
               ATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCA                                                                                >  SRR4302543.5269577/1‑94 (MQ=60)
               ATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCA                                                                                >  SRR4302543.6916437/1‑94 (MQ=60)
                TGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCAC                                                                               >  SRR4302543.4933036/1‑94 (MQ=60)
                 GACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAACACTTCAAGAAGGATTTCTGCTACATCACG                                                                              >  SRR4302543.3204518/1‑94 (MQ=60)
                 GACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACG                                                                              <  SRR4302543.7671668/94‑1 (MQ=60)
                  ACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGT                                                                             >  SRR4302543.7413103/1‑94 (MQ=60)
                   CCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTT                                                                            <  SRR4302543.6184297/94‑1 (MQ=60)
                   CCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTT                                                                            >  SRR4302543.1566635/1‑94 (MQ=60)
                   CCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTT                                                                            <  SRR4302543.3028860/94‑1 (MQ=60)
                   CCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTT                                                                            >  SRR4302543.7537164/1‑94 (MQ=60)
                    CTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTG                                                                           >  SRR4302543.1046527/1‑94 (MQ=60)
                    CTGCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATATCTGCTACATCACGCTG                                                                           >  SRR4302543.7102511/1‑94 (MQ=60)
                      TCTGCATCAACAGCGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCG                                                                         <  SRR4302543.3868021/94‑1 (MQ=60)
                       CTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGC                                                                        >  SRR4302543.5970590/1‑94 (MQ=60)
                        TGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCG                                                                       >  SRR4302543.2181536/1‑94 (MQ=60)
                         GCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGA                                                                      <  SRR4302543.5566605/94‑1 (MQ=60)
                         GCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGA                                                                      >  SRR4302543.2195492/1‑94 (MQ=60)
                          CATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGAT                                                                     <  SRR4302543.3452546/94‑1 (MQ=60)
                           ATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGCAGAATTTCTGCTACATCACGTTGCGCGATG                                                                    >  SRR4302543.3218037/1‑94 (MQ=60)
                           ATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATC                                                                    <  SRR4302543.3361214/94‑1 (MQ=60)
                           ATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATC                                                                    <  SRR4302543.3326192/94‑1 (MQ=60)
                           ATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATC                                                                    >  SRR4302543.7169309/1‑94 (MQ=60)
                           ATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATC                                                                    >  SRR4302543.7888019/1‑94 (MQ=60)
                           ATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATC                                                                    >  SRR4302543.976613/1‑94 (MQ=60)
                           ATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATC                                                                    <  SRR4302543.3099965/94‑1 (MQ=60)
                           ATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATC                                                                    >  SRR4302543.1558488/1‑94 (MQ=60)
                           ATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATC                                                                    <  SRR4302543.1306053/94‑1 (MQ=60)
                           ATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCCCGATC                                                                    >  SRR4302543.2458184/1‑94 (MQ=60)
                           ATCAACAACGGCCAGACCGGCAGAGACATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATC                                                                    >  SRR4302543.1178538/1‑94 (MQ=60)
                            TCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCG                                                                   >  SRR4302543.4291330/1‑94 (MQ=60)
                            TCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCG                                                                   <  SRR4302543.1198221/94‑1 (MQ=60)
                              AACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCG                                                                 <  SRR4302543.7359652/94‑1 (MQ=60)
                              AACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCG                                                                 >  SRR4302543.6110118/1‑94 (MQ=60)
                              AACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCG                                                                 <  SRR4302543.1540667/94‑1 (MQ=60)
                                 AACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCA                                                              >  SRR4302543.5442484/1‑94 (MQ=60)
                                 AACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCA                                                              >  SRR4302543.4720076/1‑94 (MQ=60)
                                 AACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCA                                                              <  SRR4302543.4829328/94‑1 (MQ=60)
                                 AACGGCCAGACCGGCAGAGGCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCA                                                              >  SRR4302543.6661225/1‑94 (MQ=60)
                                  ACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAA                                                             <  SRR4302543.7619966/94‑1 (MQ=60)
                                   CGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAAC                                                            <  SRR4302543.4701619/94‑1 (MQ=60)
                                   CGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAAC                                                            <  SRR4302543.3737668/94‑1 (MQ=60)
                                   CGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAAC                                                            <  SRR4302543.1722636/94‑1 (MQ=60)
                                   CGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAAC                                                            >  SRR4302543.3678765/1‑94 (MQ=60)
                                   CGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAAC                                                            <  SRR4302543.3507646/94‑1 (MQ=60)
                                   CGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAAC                                                            <  SRR4302543.2615769/94‑1 (MQ=60)
                                   CGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAAC                                                            <  SRR4302543.5260217/94‑1 (MQ=60)
                                   CGGCCAGACCGGCAGAGTCATATCCGCGGNATNCCANACNACNTAAACNTTCANGAAGAATTTCNGCTACNTCACGTTGCGCGATCGCGNCAAC                                                            >  SRR4302543.3256258/1‑94 (MQ=60)
                                    GGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACA                                                           >  SRR4302543.1345370/1‑94 (MQ=60)
                                    GGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACA                                                           >  SRR4302543.5476527/1‑94 (MQ=60)
                                     GCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAA                                                          <  SRR4302543.1077258/94‑1 (MQ=60)
                                     GCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAA                                                          >  SRR4302543.7579685/1‑94 (MQ=60)
                                      CCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAAT                                                         <  SRR4302543.7373187/94‑1 (MQ=60)
                                      CCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAAT                                                         <  SRR4302543.7816024/94‑1 (MQ=60)
                                      CCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAAT                                                         <  SRR4302543.3302005/94‑1 (MQ=60)
                                       CAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATT                                                        >  SRR4302543.5250282/1‑94 (MQ=60)
                                       CAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATT                                                        >  SRR4302543.6490670/1‑94 (MQ=60)
                                       CAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATT                                                        <  SRR4302543.4493076/94‑1 (MQ=60)
                                       CAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATT                                                        <  SRR4302543.3904212/94‑1 (MQ=60)
                                       CAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATT                                                        <  SRR4302543.2634606/94‑1 (MQ=60)
                                       CAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATT                                                        <  SRR4302543.2492083/94‑1 (MQ=60)
                                        AGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTC                                                       >  SRR4302543.2176438/1‑94 (MQ=60)
                                        AGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTC                                                       >  SRR4302543.293506/1‑94 (MQ=60)
                                        AGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTC                                                       >  SRR4302543.1873491/1‑94 (MQ=60)
                                        AGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGATGCGCGCTCGCGCCAACAATTC                                                       >  SRR4302543.4496996/1‑94 (MQ=60)
                                            CGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACA                                                   <  SRR4302543.577392/94‑1 (MQ=60)
                                            CGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACA                                                   >  SRR4302543.1707477/1‑94 (MQ=60)
                                            CGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACA                                                   <  SRR4302543.517485/94‑1 (MQ=60)
                                             GGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACAC                                                  >  SRR4302543.3768372/1‑94 (MQ=60)
                                              GCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACA                                                 <  SRR4302543.1810826/94‑1 (MQ=60)
                                               CAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACAT                                                >  SRR4302543.5995002/1‑94 (MQ=60)
                                               CAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACAT                                                >  SRR4302543.1597844/1‑94 (MQ=60)
                                               CAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACAT                                                <  SRR4302543.5839346/94‑1 (MQ=60)
                                                AGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATA                                               >  SRR4302543.4899649/1‑94 (MQ=60)
                                                AGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATA                                               >  SRR4302543.1221461/1‑94 (MQ=60)
                                                 GAGTTATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAG                                              <  SRR4302543.3129252/94‑1 (MQ=60)
                                                 GAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGAGCGATCGCGCCAACAATTCCACACATAG                                              >  SRR4302543.4098307/1‑94 (MQ=60)
                                                  AGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGT                                             <  SRR4302543.4961259/94‑1 (MQ=60)
                                                  AGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGT                                             <  SRR4302543.7050671/94‑1 (MQ=60)
                                                  AGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGT                                             <  SRR4302543.6246111/94‑1 (MQ=60)
                                                  AGTCATACCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGT                                             <  SRR4302543.7273640/94‑1 (MQ=60)
                                                    TCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTT                                           <  SRR4302543.7560820/94‑1 (MQ=60)
                                                     CATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTT                                          >  SRR4302543.1663001/1‑94 (MQ=60)
                                                     CATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTT                                          <  SRR4302543.6615186/94‑1 (MQ=60)
                                                     CATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTT                                          >  SRR4302543.5382407/1‑94 (MQ=60)
                                                     CATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTT                                          >  SRR4302543.3191037/1‑94 (MQ=60)
                                                     CATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTT                                          <  SRR4302543.6615187/94‑1 (MQ=60)
                                                     CATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTT                                          <  SRR4302543.3550836/94‑1 (MQ=60)
                                                      ATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTT                                         <  SRR4302543.7983198/94‑1 (MQ=60)
                                                      ATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTT                                         >  SRR4302543.7735447/1‑94 (MQ=60)
                                                      ATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTT                                         <  SRR4302543.1070636/94‑1 (MQ=60)
                                                      ATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTT                                         <  SRR4302543.7602876/94‑1 (MQ=60)
                                                       TATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTG                                        <  SRR4302543.6333861/94‑1 (MQ=60)
                                                        ATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGA                                       >  SRR4302543.3560136/1‑94 (MQ=60)
                                                         TCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGAT                                      <  SRR4302543.5116665/94‑1 (MQ=60)
                                                          CCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATT                                     <  SRR4302543.7763940/94‑1 (MQ=60)
                                                           CGCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTC                                    <  SRR4302543.6900509/94‑1 (MQ=60)
                                                            GCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCC                                   <  SRR4302543.6622474/94‑1 (MQ=60)
                                                            GCGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCC                                   <  SRR4302543.7384977/94‑1 (MQ=60)
                                                             CGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCG                                  <  SRR4302543.1595563/94‑1 (MQ=60)
                                                             CGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCG                                  <  SRR4302543.6136102/94‑1 (MQ=60)
                                                             CGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCG                                  >  SRR4302543.5533033/1‑94 (MQ=60)
                                                             CGGTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCG                                  <  SRR4302543.5330073/94‑1 (MQ=60)
                                                               GTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGAT                                >  SRR4302543.3026698/1‑94 (MQ=60)
                                                               GTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGAT                                >  SRR4302543.7934388/1‑94 (MQ=60)
                                                               GTATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGAT                                >  SRR4302543.7934386/1‑94 (MQ=60)
                                                                TATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATT                               <  SRR4302543.1629343/94‑1 (MQ=60)
                                                                TATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATT                               <  SRR4302543.4207778/94‑1 (MQ=60)
                                                                TAGTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATT                               <  SRR4302543.1006798/94‑1 (MQ=60)
                                                                 ATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTT                              >  SRR4302543.192071/1‑94 (MQ=60)
                                                                 ATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTT                              >  SRR4302543.7437337/1‑94 (MQ=60)
                                                                 ATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTT                              <  SRR4302543.5492759/94‑1 (MQ=60)
                                                                 ATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTT                              >  SRR4302543.6547503/1‑94 (MQ=60)
                                                                 ATTCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTT                              >  SRR4302543.3949662/1‑94 (MQ=60)
                                                                   TCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTAT                            <  SRR4302543.1458291/94‑1 (MQ=60)
                                                                   TCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTAT                            <  SRR4302543.1471231/94‑1 (MQ=60)
                                                                   TCCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTAT                            >  SRR4302543.2096180/1‑94 (MQ=60)
                                                                    CCAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATA                           >  SRR4302543.5371530/1‑94 (MQ=60)
                                                                     CAGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATAT                          <  SRR4302543.6873457/94‑1 (MQ=60)
                                                                      AGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATC                         <  SRR4302543.318098/94‑1 (MQ=60)
                                                                      AGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATC                         >  SRR4302543.6755534/1‑94 (MQ=60)
                                                                      AGACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATC                         <  SRR4302543.1136525/94‑1 (MQ=60)
                                                                      AGACGACGTAAACCTGCAAGAAGAATCTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATC                         <  SRR4302543.1136524/94‑1 (MQ=60)
                                                                       GACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCG                        <  SRR4302543.3691322/94‑1 (MQ=60)
                                                                       GACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCG                        <  SRR4302543.359486/94‑1 (MQ=60)
                                                                       GACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCG                        >  SRR4302543.5505507/1‑94 (MQ=60)
                                                                        ACGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGT                       <  SRR4302543.5582247/94‑1 (MQ=60)
                                                                         CGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTT                      >  SRR4302543.7922852/1‑94 (MQ=60)
                                                                         CGACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTT                      >  SRR4302543.5573019/1‑94 (MQ=60)
                                                                          GACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTG                     <  SRR4302543.4414098/94‑1 (MQ=60)
                                                                          GACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTG                     <  SRR4302543.5826534/94‑1 (MQ=60)
                                                                          GACGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTG                     <  SRR4302543.6366389/94‑1 (MQ=60)
                                                                            CGTAAACCTTCAAGAAGGATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTC                   <  SRR4302543.5022547/94‑1 (MQ=60)
                                                                            CGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTC                   >  SRR4302543.1331476/1‑94 (MQ=60)
                                                                            CGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTC                   >  SRR4302543.7175364/1‑94 (MQ=60)
                                                                            CGTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTC                   <  SRR4302543.3095398/94‑1 (MQ=60)
                                                                             GTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCG                  >  SRR4302543.7740405/1‑94 (MQ=60)
                                                                             GTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCG                  >  SRR4302543.6879280/1‑94 (MQ=60)
                                                                             GTAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCG                  <  SRR4302543.872424/94‑1 (MQ=60)
                                                                              TAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGG                 <  SRR4302543.676306/94‑1 (MQ=60)
                                                                              TAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGG                 <  SRR4302543.3826940/94‑1 (MQ=60)
                                                                              TAAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGG                 <  SRR4302543.3923627/94‑1 (MQ=60)
                                                                               AAACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCAATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGT                >  SRR4302543.5197903/1‑94 (MQ=60)
                                                                                AACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTC               <  SRR4302543.666754/94‑1 (MQ=60)
                                                                                AACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTC               >  SRR4302543.7837345/1‑94 (MQ=60)
                                                                                 ACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATctcgtatgccgtct              >  SRR4302543.3731045/1‑80 (MQ=60)
                                                                                 ACCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCA              >  SRR4302543.6731126/1‑94 (MQ=60)
                                                                                  CCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAA             <  SRR4302543.1455702/94‑1 (MQ=60)
                                                                                  CCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAA             <  SRR4302543.1922308/94‑1 (MQ=60)
                                                                                  CCTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAA             <  SRR4302543.7236329/94‑1 (MQ=60)
                                                                                   CTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAAC            >  SRR4302543.2751209/1‑94 (MQ=60)
                                                                                   CTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAAC            >  SRR4302543.7488407/1‑94 (MQ=60)
                                                                                   CTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAAC            >  SRR4302543.4282452/1‑94 (MQ=60)
                                                                                   CTTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAAC            >  SRR4302543.4282453/1‑94 (MQ=60)
                                                                                    TTCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACC           >  SRR4302543.1745064/1‑94 (MQ=60)
                                                                                     TCAAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCT          <  SRR4302543.3955417/94‑1 (MQ=60)
                                                                                       AAGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGT        >  SRR4302543.450055/1‑94 (MQ=60)
                                                                                        AGAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTA       >  SRR4302543.4839879/1‑94 (MQ=60)
                                                                                         GAAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTAT      >  SRR4302543.4626538/1‑94 (MQ=60)
                                                                                          AAGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTATG     <  SRR4302543.8007992/94‑1 (MQ=60)
                                                                                           AGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTATGC    >  SRR4302543.3434669/1‑94 (MQ=60)
                                                                                           AGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTATGC    >  SRR4302543.4024541/1‑94 (MQ=60)
                                                                                           AGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTATGC    <  SRR4302543.2000379/94‑1 (MQ=60)
                                                                                           AGAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTATGC    >  SRR4302543.5972872/1‑94 (MQ=60)
                                                                                            GAATTTCTGCTACATCCCGTTGCGCGATCGCGCCAACAATTCCACACATCGCTTTTGATTCCGCTTTCTATCGTTGTCGGTCCACCTGTCTGCC   >  SRR4302543.4219169/1‑94 (MQ=60)
                                                                                            GAATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTATGCC   >  SRR4302543.7650996/1‑94 (MQ=60)
                                                                                             AATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTATGCCC  <  SRR4302543.6490177/94‑1 (MQ=60)
                                                                                             AATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTATGCCC  >  SRR4302543.2721043/1‑94 (MQ=60)
                                                                                             |                                                                                             
ACGCAGGCGGGTCATATGACCTTCTGCATCAACAACGGCCAGACCGGCAGAGTCATATCCGCGGTATTCCAGACGACGTAAACCTTCAAGAAGGATTTCTGCTACATCACGTTGCGCGATCGCGCCAACAATTCCACACATAGTTTTTGATTCCGATTTATATCGTTGTCGGTCAACCTGTATGCCC  >  NC_000913/3911156‑3911342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑