Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,916,382 A→G V368V (GTT→GTC)  atpA ← membrane‑bound ATP synthase, F1 sector, alpha‑subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,916,3820AG99.5% 1234.6 / ‑3.7 400V368V (GTT→GTC) atpAmembrane‑bound ATP synthase, F1 sector, alpha‑subunit
Reads supporting (aligned to +/- strand):  ref base A (0/2);  new base G (182/215);  total (183/217)
Fisher's exact test for biased strand distribution p-value = 5.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.81e-01

Only 100 of 408 total aligned reads displayed.

TGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGC  >  NC_000913/3916292‑3916471
                                                                                          |                                                                                         
   cAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGc                                                                                      <  1:912349/93‑1 (MQ=255)
     gagCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAg                                                                                    <  2:6063518/93‑1 (MQ=255)
     gagCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAg                                                                                    <  1:6816817/93‑1 (MQ=255)
     gagCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAg                                                                                    >  2:1856873/1‑93 (MQ=255)
       gCGGTACGGATGCCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGa                                                                                  <  2:1520725/93‑1 (MQ=255)
       gCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGa                                                                                  <  1:2298302/93‑1 (MQ=255)
         ggTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACg                                                                                >  2:2081922/1‑93 (MQ=255)
          gTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGa                                                                               >  1:215226/1‑93 (MQ=255)
           tACGGATACCACCGTACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGaa                                                                              <  1:3932889/93‑1 (MQ=255)
           tACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGaa                                                                              <  1:2059545/93‑1 (MQ=255)
           tACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGaa                                                                              <  1:617237/93‑1 (MQ=255)
            aCGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAt                                                                             >  2:3749838/1‑93 (MQ=255)
            aCGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAt                                                                             >  1:3898504/1‑93 (MQ=255)
            aCGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAt                                                                             <  1:2658326/93‑1 (MQ=255)
             cGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATa                                                                            <  1:5007427/93‑1 (MQ=255)
               gATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATAcc                                                                          <  2:798132/93‑1 (MQ=255)
                aTACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCg                                                                         <  2:7784537/93‑1 (MQ=255)
                 tACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCgg                                                                        >  1:5437061/1‑93 (MQ=255)
                  accaccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGc                                                                       <  2:1680325/93‑1 (MQ=255)
                   ccaccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCg                                                                      >  2:5492541/1‑93 (MQ=255)
                    caccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGt                                                                     <  1:1618220/93‑1 (MQ=255)
                     accGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGtt                                                                    >  2:3404015/1‑93 (MQ=255)
                     accGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGtt                                                                    <  2:4865230/93‑1 (MQ=255)
                      ccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTg                                                                   <  2:7303245/93‑1 (MQ=255)
                      ccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTg                                                                   <  1:274198/93‑1 (MQ=255)
                      ccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACAGCAGGACGAATACCGGCGTTg                                                                   >  1:7831064/1‑93 (MQ=255)
                        ggACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGaa                                                                 >  1:6915111/1‑93 (MQ=255)
                        ggACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGaa                                                                 >  2:3317437/1‑93 (MQ=255)
                        ggACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGaa                                                                 >  2:2647590/1‑93 (MQ=255)
                        ggACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCAGCGTTaaa                                                                 >  2:5250394/1‑93 (MQ=255)
                         gACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAc                                                                >  1:4534803/1‑93 (MQ=255)
                             gTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggt                                                            >  1:4110784/1‑93 (MQ=255)
                              ttttttCATGATCTTGGTCTGTGCTGCACCTCCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggtt                                                           <  2:1769379/93‑1 (MQ=255)
                              ttttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggtt                                                           <  1:4936711/93‑1 (MQ=255)
                              ttttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggtt                                                           <  1:4818106/93‑1 (MQ=255)
                              ttttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggtt                                                           <  1:1084733/93‑1 (MQ=255)
                              ttttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggtt                                                           >  2:1223838/1‑93 (MQ=255)
                               tttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggttg                                                          <  2:5365988/93‑1 (MQ=255)
                               tttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggttg                                                          >  2:6634886/1‑93 (MQ=255)
                               tttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggctg                                                          >  2:2489766/1‑93 (MQ=255)
                                  ttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggttggtt                                                       <  1:331346/93‑1 (MQ=255)
                                     aTGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTcc                                                    <  2:4501581/93‑1 (MQ=255)
                                      tGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCa                                                   >  1:4347824/1‑93 (MQ=255)
                                       gATCTTGGTCTGTGCTGCACCACCTACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAg                                                  >  1:3632443/1‑93 (MQ=255)
                                       gATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAg                                                  <  1:6108988/93‑1 (MQ=255)
                                         tCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGa                                                >  2:7601207/1‑93 (MQ=255)
                                          cTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGaa                                               <  1:7555261/93‑1 (MQ=255)
                                          cTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGaa                                               <  1:2588197/93‑1 (MQ=255)
                                           ttGGTCTGTGCTGCACCACCAACACGGGATACGGAAATGCCCGGGTTGACCGCAGGACGAATACCGGCGTTGACCAGGTTGGTTTCCAGGAAg                                              <  2:3061785/93‑1 (MQ=255)
                                           ttGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAg                                              <  1:6033692/93‑1 (MQ=255)
                                           ttGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAg                                              <  2:7398816/93‑1 (MQ=255)
                                           ttGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGCTTCCAGGAAg                                              >  2:5558257/1‑93 (MQ=255)
                                            tGGTCTGTGCTGCACCACCAACANGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGa                                             <  1:7933464/93‑1 (MQ=255)
                                            tGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGa                                             <  2:3883491/93‑1 (MQ=255)
                                            tGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGa                                             >  2:3567058/1‑93 (MQ=255)
                                             ggTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGAt                                            <  1:7362937/93‑1 (MQ=255)
                                              gTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATc                                           <  1:301741/93‑1 (MQ=255)
                                              gTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATc                                           <  2:2233970/93‑1 (MQ=255)
                                               tCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCGGGAAGATcg                                          >  2:6718954/1‑92 (MQ=255)
                                                 tgtgCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTgc                                        >  2:1946430/1‑92 (MQ=255)
                                                 tgtgCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGa                                        <  1:1734073/93‑1 (MQ=255)
                                                 tgtgCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGa                                        <  1:1533272/93‑1 (MQ=255)
                                                 tgtgCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGa                                        >  2:2963902/1‑93 (MQ=255)
                                                  gtgCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGAc                                       <  1:1307834/93‑1 (MQ=255)
                                                    gctgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCa                                     >  2:6181121/1‑93 (MQ=255)
                                                    gctgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCa                                     <  1:6585623/93‑1 (MQ=255)
                                                     ctgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCAt                                    >  2:5840414/1‑93 (MQ=255)
                                                     ctgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCAt                                    <  2:6810892/93‑1 (MQ=255)
                                                      tgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATc                                   >  2:1996493/1‑93 (MQ=255)
                                                       gcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCg                                  >  1:5284799/1‑93 (MQ=255)
                                                        caccacCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCgg                                 <  1:3485850/93‑1 (MQ=255)
                                                         accaccAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCgga                                >  1:5573418/1‑92 (MQ=255)
                                                           cacnaNCANGGGATACGGAAATACNCGGGNTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTaa                              <  2:4372939/93‑1 (MQ=255)
                                                            accaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAt                             <  1:5211792/93‑1 (MQ=255)
                                                            accaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAt                             >  2:3638746/1‑93 (MQ=255)
                                                              caACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATgg                           <  2:7218223/93‑1 (MQ=255)
                                                               aaCACGGGATACGGAAATGCCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGga                          <  2:6864959/93‑1 (MQ=255)
                                                               aaCACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGga                          >  1:5741646/1‑93 (MQ=255)
                                                               aaCACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGga                          >  1:7162812/1‑93 (MQ=255)
                                                               aaCACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGga                          >  2:6984314/1‑93 (MQ=255)
                                                               aaCACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGATTGGTTTCCAGGAAGATCTGACCATCGGTAATGga                          <  1:7017981/93‑1 (MQ=255)
                                                                 cacGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGgaga                        <  2:4815623/93‑1 (MQ=255)
                                                                 cacGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGgaga                        >  2:5458314/1‑93 (MQ=255)
                                                                   cGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGAtt                      <  2:4676434/93‑1 (MQ=255)
                                                                    gggATACGGAAATCCCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTa                     <  1:644679/93‑1 (MQ=255)
                                                                    gggATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTa                     <  2:3227521/93‑1 (MQ=255)
                                                                      gATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACg                   >  1:5857051/1‑93 (MQ=255)
                                                                      gATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACg                   >  2:5994154/1‑93 (MQ=255)
                                                                        tACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGtt                 <  1:2411193/93‑1 (MQ=255)
                                                                        tACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGtt                 <  1:3170121/93‑1 (MQ=255)
                                                                        tACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGtt                 <  1:284648/93‑1 (MQ=255)
                                                                         aCGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTg                <  2:1056918/93‑1 (MQ=255)
                                                                           ggAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGt              <  1:5913880/93‑1 (MQ=255)
                                                                               aTACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGga          >  1:1972312/1‑93 (MQ=255)
                                                                                tACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaa         <  1:861582/93‑1 (MQ=255)
                                                                                   ccGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaacga      >  2:2389379/1‑93 (MQ=255)
                                                                                   ccGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaacga      <  2:2440489/93‑1 (MQ=255)
                                                                                    cGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaacgaa     <  1:3073535/93‑1 (MQ=255)
                                                                                      ggTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGaacgaacg   >  2:7465410/1‑93 (MQ=255)
                                                                                       gTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGc  >  2:4088081/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGC  >  NC_000913/3916292‑3916471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 219 total aligned reads displayed.
CTGTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAA  >  NC_000913/3916289‑3916475
                                                                                             |                                                                                             
CTGTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTG                                                                                               <  SRR4302543.5825524/94‑1 (MQ=60)
CTGTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTG                                                                                               >  SRR4302543.2697747/1‑94 (MQ=60)
  GTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGAC                                                                                             <  SRR4302543.3803771/94‑1 (MQ=60)
  GTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGAC                                                                                             <  SRR4302543.4748728/94‑1 (MQ=60)
   TGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACC                                                                                            <  SRR4302543.7440902/94‑1 (MQ=60)
     CCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGC                                                                                          >  SRR4302543.581037/1‑94 (MQ=60)
      CAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCA                                                                                         <  SRR4302543.920363/94‑1 (MQ=60)
      CAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCA                                                                                         >  SRR4302543.2401278/1‑94 (MQ=60)
      CAGAGCGGGACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCCCCACCAACACGGGATACGGAAATACCCGGGTTGACCGCA                                                                                         <  SRR4302543.6959121/94‑1 (MQ=60)
       AGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAG                                                                                        >  SRR4302543.2261273/1‑94 (MQ=60)
       AGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAG                                                                                        >  SRR4302543.2357869/1‑94 (MQ=60)
       AGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAG                                                                                        >  SRR4302543.5775966/1‑94 (MQ=60)
       AGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAG                                                                                        >  SRR4302543.7938057/1‑94 (MQ=60)
       AGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAG                                                                                        >  SRR4302543.950979/1‑94 (MQ=60)
        GAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGG                                                                                       <  SRR4302543.7729403/94‑1 (MQ=60)
        GAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGG                                                                                       <  SRR4302543.343058/94‑1 (MQ=60)
        GAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGG                                                                                       <  SRR4302543.6881172/94‑1 (MQ=60)
        GAGCGGTACGGATACCACCGCACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGG                                                                                       <  SRR4302543.501836/94‑1 (MQ=60)
         AGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGA                                                                                      <  SRR4302543.5568870/94‑1 (MQ=60)
          GCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGAC                                                                                     <  SRR4302543.2319255/94‑1 (MQ=60)
           CGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACG                                                                                    >  SRR4302543.6009603/1‑94 (MQ=60)
           CGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACG                                                                                    >  SRR4302543.69872/1‑94 (MQ=60)
           CGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACAGAAATACCCGGGTTGACCGCAGGACG                                                                                    >  SRR4302543.69873/1‑94 (MQ=60)
            GGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGA                                                                                   >  SRR4302543.2112191/1‑94 (MQ=60)
            GGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGA                                                                                   >  SRR4302543.217073/1‑94 (MQ=60)
             GTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAA                                                                                  <  SRR4302543.4123026/94‑1 (MQ=60)
              TACGGATACCACCGTACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAT                                                                                 <  SRR4302543.3967629/94‑1 (MQ=60)
              TACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAT                                                                                 <  SRR4302543.2474666/94‑1 (MQ=60)
              TACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAT                                                                                 >  SRR4302543.3932930/1‑94 (MQ=60)
              TACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAT                                                                                 <  SRR4302543.2077972/94‑1 (MQ=60)
              TACGGATACCACCGGACAGTTTTTGCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAT                                                                                 <  SRR4302543.622879/94‑1 (MQ=60)
               ACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATA                                                                                >  SRR4302543.20880/1‑94 (MQ=60)
               ACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATA                                                                                <  SRR4302543.902229/94‑1 (MQ=60)
               ACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATA                                                                                <  SRR4302543.2682426/94‑1 (MQ=60)
               ACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATA                                                                                >  SRR4302543.5888233/1‑94 (MQ=60)
                CGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGCAATACCCGGGTTGACCGCAGGACGAATAC                                                                               >  SRR4302543.7217532/1‑94 (MQ=60)
                CGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATAC                                                                               <  SRR4302543.5052999/94‑1 (MQ=60)
                CGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATAC                                                                               <  SRR4302543.5481166/94‑1 (MQ=60)
                CGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATAC                                                                               >  SRR4302543.3098899/1‑94 (MQ=60)
                 GGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACC                                                                              <  SRR4302543.2635709/94‑1 (MQ=60)
                   ATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGG                                                                            >  SRR4302543.5486438/1‑94 (MQ=60)
                   ATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGG                                                                            >  SRR4302543.940809/1‑94 (MQ=60)
                   ATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGG                                                                            <  SRR4302543.1541926/94‑1 (MQ=60)
                      CCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGT                                                                         <  SRR4302543.7420236/94‑1 (MQ=60)
                      CCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGT                                                                         >  SRR4302543.3785865/1‑94 (MQ=60)
                       CACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTT                                                                        <  SRR4302543.1632640/94‑1 (MQ=60)
                       CACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTT                                                                        >  SRR4302543.3038261/1‑94 (MQ=60)
                        CCCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTG                                                                       <  SRR4302543.6938400/94‑1 (MQ=60)
                        ACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTG                                                                       <  SRR4302543.1990592/94‑1 (MQ=60)
                        ACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTG                                                                       >  SRR4302543.6222324/1‑94 (MQ=60)
                        ACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTG                                                                       >  SRR4302543.591190/1‑94 (MQ=60)
                        ACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACAGCAGGACGAATACCGGCGTTG                                                                       >  SRR4302543.7904799/1‑94 (MQ=60)
                         CCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGA                                                                      >  SRR4302543.6540060/1‑94 (MQ=60)
                         CCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGA                                                                      <  SRR4302543.276616/94‑1 (MQ=60)
                         CCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGGTGAACGCAGGACGAATACCGGCGGTGA                                                                      >  SRR4302543.605979/1‑94 (MQ=60)
                          CGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAA                                                                     >  SRR4302543.844706/1‑94 (MQ=60)
                          CGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAA                                                                     >  SRR4302543.5193267/1‑94 (MQ=60)
                          CGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAA                                                                     >  SRR4302543.6980113/1‑94 (MQ=60)
                           GGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAC                                                                    >  SRR4302543.4576085/1‑94 (MQ=60)
                           GGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAC                                                                    >  SRR4302543.956637/1‑94 (MQ=60)
                           CGACAGTTTTTTCATGATCTTGGTCTGTGCTGCTCCACCAACTCGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAC                                                                    <  SRR4302543.7978124/94‑1 (MQ=60)
                            GACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACA                                                                   >  SRR4302543.6306998/1‑94 (MQ=60)
                              CAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGG                                                                 <  SRR4302543.66122/94‑1 (MQ=60)
                               AGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGT                                                                >  SRR4302543.4147781/1‑94 (MQ=60)
                               AGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGT                                                                <  SRR4302543.6182275/94‑1 (MQ=60)
                               AGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGT                                                                <  SRR4302543.3480735/94‑1 (MQ=60)
                                GTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTT                                                               <  SRR4302543.1689829/94‑1 (MQ=60)
                                GTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTT                                                               <  SRR4302543.6796767/94‑1 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTG                                                              <  SRR4302543.1094482/94‑1 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTG                                                              <  SRR4302543.4862102/94‑1 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTG                                                              <  SRR4302543.4981669/94‑1 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTG                                                              <  SRR4302543.208036/94‑1 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTG                                                              <  SRR4302543.6538982/94‑1 (MQ=60)
                                  TTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATGCCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGG                                                             <  SRR4302543.7501749/94‑1 (MQ=60)
                                  TTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGG                                                             <  SRR4302543.909117/94‑1 (MQ=60)
                                  TTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGG                                                             >  SRR4302543.292384/1‑94 (MQ=60)
                                   TTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGATGACAGCAGGACGAATACCGGCGTTGAACAGGTTGGT                                                            >  SRR4302543.4299956/1‑94 (MQ=60)
                                    TTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTT                                                           <  SRR4302543.2386038/94‑1 (MQ=60)
                                    TTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTT                                                           <  SRR4302543.1455911/94‑1 (MQ=60)
                                     TTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTT                                                          <  SRR4302543.334381/94‑1 (MQ=60)
                                     TTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTT                                                          >  SRR4302543.5062843/1‑94 (MQ=60)
                                        ATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCA                                                       >  SRR4302543.1786716/1‑94 (MQ=60)
                                        ATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCA                                                       >  SRR4302543.4387239/1‑94 (MQ=60)
                                        ATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCA                                                       <  SRR4302543.1107772/94‑1 (MQ=60)
                                        ATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCA                                                       <  SRR4302543.1137545/94‑1 (MQ=60)
                                         TGATCTTGGTCTGTGCTGCACCACCTACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAG                                                      >  SRR4302543.3664423/1‑94 (MQ=60)
                                         TGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAG                                                      <  SRR4302543.83421/94‑1 (MQ=60)
                                          GATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGG                                                     <  SRR4302543.4876237/94‑1 (MQ=60)
                                          GATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGG                                                     <  SRR4302543.887906/94‑1 (MQ=60)
                                          GATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGG                                                     <  SRR4302543.6166865/94‑1 (MQ=60)
                                            TCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAA                                                   <  SRR4302543.5243233/94‑1 (MQ=60)
                                            TCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAA                                                   <  SRR4302543.3310958/94‑1 (MQ=60)
                                             CTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAG                                                  >  SRR4302543.6134425/1‑94 (MQ=60)
                                             CTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAG                                                  <  SRR4302543.2611734/94‑1 (MQ=60)
                                             CTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAG                                                  >  SRR4302543.1720230/1‑94 (MQ=60)
                                              TTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGA                                                 <  SRR4302543.6090348/94‑1 (MQ=60)
                                              TTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGA                                                 <  SRR4302543.5957296/94‑1 (MQ=60)
                                              TTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGA                                                 >  SRR4302543.6904304/1‑94 (MQ=60)
                                              TTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGA                                                 <  SRR4302543.4776002/94‑1 (MQ=60)
                                               TGGTCTGTGCTGCACCACCAACANGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGAT                                                <  SRR4302543.8007933/94‑1 (MQ=60)
                                               TGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGAT                                                <  SRR4302543.6028230/94‑1 (MQ=60)
                                                TGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC                                               <  SRR4302543.2269825/94‑1 (MQ=60)
                                                GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC                                               <  SRR4302543.2816590/94‑1 (MQ=60)
                                                GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC                                               >  SRR4302543.3641791/1‑94 (MQ=60)
                                                GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC                                               <  SRR4302543.2816591/94‑1 (MQ=60)
                                                GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC                                               <  SRR4302543.2639264/94‑1 (MQ=60)
                                                GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC                                               <  SRR4302543.7433738/94‑1 (MQ=60)
                                                GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC                                               <  SRR4302543.1877808/94‑1 (MQ=60)
                                                GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC                                               <  SRR4302543.6311027/94‑1 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              <  SRR4302543.3574214/94‑1 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              <  SRR4302543.304453/94‑1 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              <  SRR4302543.304454/94‑1 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              >  SRR4302543.3793683/1‑94 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              <  SRR4302543.45335/94‑1 (MQ=60)
                                                   CTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGA                                            >  SRR4302543.3634210/1‑94 (MQ=60)
                                                    TGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGAC                                           <  SRR4302543.1547012/94‑1 (MQ=60)
                                                    TGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGAC                                           <  SRR4302543.1749528/94‑1 (MQ=60)
                                                     GTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACC                                          >  SRR4302543.750719/1‑94 (MQ=60)
                                                     GTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACC                                          <  SRR4302543.1319454/94‑1 (MQ=60)
                                                     GTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACC                                          >  SRR4302543.7994340/1‑94 (MQ=60)
                                                       GCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCAT                                        <  SRR4302543.4611484/94‑1 (MQ=60)
                                                       GCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCAT                                        >  SRR4302543.6274854/1‑94 (MQ=60)
                                                       GCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCAT                                        <  SRR4302543.5869959/94‑1 (MQ=60)
                                                       GCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCAT                                        <  SRR4302543.6647660/94‑1 (MQ=60)
                                                        CTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATC                                       >  SRR4302543.7837039/1‑94 (MQ=60)
                                                        CTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATC                                       <  SRR4302543.4144060/94‑1 (MQ=60)
                                                         TGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCG                                      <  SRR4302543.8003117/94‑1 (MQ=60)
                                                         TGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCG                                      >  SRR4302543.5332494/1‑94 (MQ=60)
                                                          GCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGG                                     >  SRR4302543.2847170/1‑94 (MQ=60)
                                                           CACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGT                                    <  SRR4302543.3517063/94‑1 (MQ=60)
                                                           CACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGT                                    <  SRR4302543.2690658/94‑1 (MQ=60)
                                                           CACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGT                                    >  SRR4302543.1500369/1‑94 (MQ=60)
                                                           CACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGT                                    <  SRR4302543.3120485/94‑1 (MQ=60)
                                                           CACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGA                                    >  SRR4302543.5624141/1‑94 (MQ=60)
                                                            ACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTA                                   <  SRR4302543.4311518/94‑1 (MQ=60)
                                                             CCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAA                                  >  SRR4302543.7342718/1‑94 (MQ=60)
                                                              CACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAT                                 >  SRR4302543.7270497/1‑94 (MQ=60)
                                                              CACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAT                                 <  SRR4302543.3225954/94‑1 (MQ=60)
                                                              CACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAT                                 <  SRR4302543.3225953/94‑1 (MQ=60)
                                                              CACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAT                                 <  SRR4302543.2468327/94‑1 (MQ=60)
                                                              CACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAT                                 <  SRR4302543.2744754/94‑1 (MQ=60)
                                                              CACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAT                                 <  SRR4302543.2744753/94‑1 (MQ=60)
                                                               ACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATG                                <  SRR4302543.5258750/94‑1 (MQ=60)
                                                               ACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATG                                <  SRR4302543.5258749/94‑1 (MQ=60)
                                                                CCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTTAACAGGATGGTTTCCAGGAAGATCTGACCCTCGGTAATGG                               >  SRR4302543.7142425/1‑94 (MQ=60)
                                                                CCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGG                               >  SRR4302543.3959792/1‑94 (MQ=60)
                                                                CCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGG                               <  SRR4302543.4987467/94‑1 (MQ=60)
                                                                CCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGCTGGGTTCCAGGAAGATCTGACCATCGGTAATGG                               >  SRR4302543.3672509/1‑94 (MQ=60)
                                                                 CAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGA                              >  SRR4302543.5793994/1‑94 (MQ=60)
                                                                 CAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGA                              >  SRR4302543.2961890/1‑94 (MQ=60)
                                                                 CAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGA                              >  SRR4302543.7232399/1‑94 (MQ=60)
                                                                  AACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAG                             >  SRR4302543.4675751/1‑94 (MQ=60)
                                                                  AACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAG                             <  SRR4302543.1686548/94‑1 (MQ=60)
                                                                  AACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGATTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAG                             <  SRR4302543.7085091/94‑1 (MQ=60)
                                                                   ACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGA                            >  SRR4302543.7901640/1‑94 (MQ=60)
                                                                   ACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGA                            >  SRR4302543.2560464/1‑94 (MQ=60)
                                                                    CACGGGATACGGAAATACCCGGGTTGACAGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGAT                           >  SRR4302543.5329532/1‑94 (MQ=60)
                                                                     ACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATT                          <  SRR4302543.1594947/94‑1 (MQ=60)
                                                                     ACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGCTTCCAGGAAGATCTGACCATCGGTAATGGAGATT                          >  SRR4302543.3076117/1‑94 (MQ=60)
                                                                       GGGATACGGAAATCCCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTAC                        <  SRR4302543.650569/94‑1 (MQ=60)
                                                                        GGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACG                       >  SRR4302543.5910365/1‑94 (MQ=60)
                                                                        GGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACG                       <  SRR4302543.610387/94‑1 (MQ=60)
                                                                         GATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGT                      <  SRR4302543.5625033/94‑1 (MQ=60)
                                                                         GATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGT                      >  SRR4302543.423484/1‑94 (MQ=60)
                                                                          ATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTT                     >  SRR4302543.4858840/1‑94 (MQ=60)
                                                                           TACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTG                    <  SRR4302543.2432983/94‑1 (MQ=60)
                                                                           TACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTG                    <  SRR4302543.1283058/94‑1 (MQ=60)
                                                                           TACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTG                    >  SRR4302543.6713428/1‑94 (MQ=60)
                                                                           TACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTG                    <  SRR4302543.3198674/94‑1 (MQ=60)
                                                                             CGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGT                  >  SRR4302543.3957266/1‑94 (MQ=60)
                                                                             CGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGT                  <  SRR4302543.5959709/94‑1 (MQ=60)
                                                                               GAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCG                >  SRR4302543.1902115/1‑94 (MQ=60)
                                                                               GAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCG                >  SRR4302543.6130906/1‑94 (MQ=60)
                                                                               GAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCG                >  SRR4302543.2872112/1‑94 (MQ=60)
                                                                               GAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCG                >  SRR4302543.5509185/1‑94 (MQ=60)
                                                                                 AATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGA              >  SRR4302543.1989990/1‑94 (MQ=60)
                                                                                  ATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAA             >  SRR4302543.3932381/1‑94 (MQ=60)
                                                                                  ATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAA             <  SRR4302543.5349247/94‑1 (MQ=60)
                                                                                  ATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAA             >  SRR4302543.5554628/1‑94 (MQ=60)
                                                                                   TACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAAC            <  SRR4302543.5483107/94‑1 (MQ=60)
                                                                                   TACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAAC            <  SRR4302543.869263/94‑1 (MQ=60)
                                                                                    ACCCGGGTTGACCGCAGGATGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACG           >  SRR4302543.6473349/1‑94 (MQ=60)
                                                                                    ACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACG           >  SRR4302543.5016010/1‑94 (MQ=60)
                                                                                    ACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACG           >  SRR4302543.4549964/1‑94 (MQ=60)
                                                                                     CCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGA          >  SRR4302543.4881461/1‑94 (MQ=60)
                                                                                      CCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAA         >  SRR4302543.3137632/1‑94 (MQ=60)
                                                                                      CCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAA         >  SRR4302543.156380/1‑94 (MQ=60)
                                                                                       CGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAAC        <  SRR4302543.4030219/94‑1 (MQ=60)
                                                                                       CGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAAC        <  SRR4302543.3101173/94‑1 (MQ=60)
                                                                                        GGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACG       >  SRR4302543.2291834/1‑94 (MQ=60)
                                                                                        GGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACG       <  SRR4302543.3395542/94‑1 (MQ=60)
                                                                                        GGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACG       <  SRR4302543.7041310/94‑1 (MQ=60)
                                                                                         GGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACTC      >  SRR4302543.2050902/1‑94 (MQ=60)
                                                                                          GTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCA     >  SRR4302543.4146275/1‑94 (MQ=60)
                                                                                          GTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCA     >  SRR4302543.7581080/1‑94 (MQ=60)
                                                                                           TTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAG    >  SRR4302543.7770348/1‑94 (MQ=60)
                                                                                           TTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAG    >  SRR4302543.2357844/1‑94 (MQ=60)
                                                                                           TTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAG    >  SRR4302543.7770344/1‑94 (MQ=60)
                                                                                            TGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGA   <  SRR4302543.1147179/94‑1 (MQ=60)
                                                                                             GACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAA  <  SRR4302543.2721050/94‑1 (MQ=60)
                                                                                             |                                                                                             
CTGTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAA  >  NC_000913/3916289‑3916475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑