Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,964,245	T→C	Y72H (TAC→CAC)	rho →	transcription termination factor Rho

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,964,245	0	T	C	99.7%	1071.7 / NA	345	Y72H (TAC→CAC)	rho	transcription termination factor Rho
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (184/160); total (184/161)
Fisher's exact test for biased strand distribution p-value = 4.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 364 total aligned reads displayed.

ACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATT  >  NC_000913/3964156‑3964334

 cGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCt                                                                                       >  1:1713555/1‑93 (MQ=255)

  gCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTc                                                                                      >  1:2425337/1‑93 (MQ=255)

  gCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTc                                                                                      >  1:7457388/1‑93 (MQ=255)

  gCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTc                                                                                      >  1:397128/1‑93 (MQ=255)

   cAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCg                                                                                     >  2:6025985/1‑93 (MQ=255)

   cAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCg                                                                                     >  1:800764/1‑93 (MQ=255)

     aaGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGcc                                                                                   <  1:3012173/93‑1 (MQ=255)

     aaGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGcc                                                                                   >  2:3804499/1‑93 (MQ=255)

     aaGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGcc                                                                                   >  2:3309376/1‑93 (MQ=255)

      agagTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCg                                                                                  <  2:3182231/93‑1 (MQ=255)

       gagaGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCgg                                                                                 >  2:4688035/1‑93 (MQ=255)

       gagTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCgg                                                                                 >  1:7794981/1‑93 (MQ=255)

        agTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGt                                                                                <  1:2644159/93‑1 (MQ=255)

          tGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTcc                                                                              >  1:3811283/1‑93 (MQ=255)

             cGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCtga                                                                           <  1:3099039/93‑1 (MQ=255)

                aGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCtgatga                                                                        <  2:5176152/93‑1 (MQ=255)

                aGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCtgatga                                                                        <  2:943623/93‑1 (MQ=255)

                aGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCtgatga                                                                        >  1:1278653/1‑93 (MQ=255)

                 gATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGAc                                                                       >  2:6910197/1‑93 (MQ=255)

                 gATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGAc                                                                       <  2:4479119/93‑1 (MQ=255)

                 gATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGAc                                                                       >  2:6545365/1‑93 (MQ=255)

                 aatatCGTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGAc                                                                       <  2:1118702/92‑1 (MQ=255)

                  atatCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACa                                                                      >  1:1477128/1‑93 (MQ=255)

                    atCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATc                                                                    >  1:6080319/1‑93 (MQ=255)

                     tCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCt                                                                   >  1:7166434/1‑93 (MQ=255)

                      cTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTa                                                                  <  2:2305898/93‑1 (MQ=255)

                      cTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTa                                                                  >  1:4182761/1‑93 (MQ=255)

                       tttGGTGATGGCGTACTGGAGATATTGCAGGATGGCTTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCTGGTCCTGCTGACATCTAc                                                                 >  1:4780745/1‑93 (MQ=255)

                         tGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGt                                                               <  2:214287/93‑1 (MQ=255)

                          ggTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGtt                                                              <  1:4566887/93‑1 (MQ=255)

                           gTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGttt                                                             >  2:6797943/1‑93 (MQ=255)

                            tGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTc                                                            >  1:4577592/1‑93 (MQ=255)

                             gATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTcc                                                           <  2:4871520/93‑1 (MQ=255)

                             gATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTcc                                                           >  1:3919127/1‑93 (MQ=255)

                             gATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTcc                                                           <  2:5579331/93‑1 (MQ=255)

                               tGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGAACTCTACGTTTcccc                                                         >  1:2377508/1‑93 (MQ=255)

                                ggCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCt                                                        >  1:1608454/1‑93 (MQ=255)

                                  cGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAg                                                      <  1:6301942/93‑1 (MQ=255)

                                   gTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGc                                                     <  1:6959666/93‑1 (MQ=255)

                                    tACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGcc                                                    >  1:6623613/1‑93 (MQ=255)

                                    tACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGcc                                                    >  1:1818820/1‑93 (MQ=255)

                                     aCTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCa                                                   <  2:2867766/93‑1 (MQ=255)

                                       tGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCaaa                                                 <  1:5951909/93‑1 (MQ=255)

                                       tGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCaaa                                                 >  1:3085006/1‑93 (MQ=255)

                                       tGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCaaa                                                 >  2:4528078/1‑93 (MQ=255)

                                       tGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCaaa                                                 <  2:2382019/93‑1 (MQ=255)

                                         gagaTATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATc                                               >  2:2475804/1‑93 (MQ=255)

                                         gagaTATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATc                                               <  2:7367041/93‑1 (MQ=255)

                                           gaTATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATccg                                             >  2:1495596/1‑93 (MQ=255)

                                              atTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATccgccg                                          >  2:2658259/1‑93 (MQ=255)

                                              atTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGAAAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATccgccg                                          >  2:5799156/1‑93 (MQ=255)

                                                tGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTCCCCCTAGCCAAATCCGCCGtt                                        <  2:5015736/93‑1 (MQ=255)

                                                 gCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGttt                                       <  1:912282/93‑1 (MQ=255)

                                                  cAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTc                                      <  1:4806081/93‑1 (MQ=255)

                                                  cAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTc                                      <  2:4070542/93‑1 (MQ=255)

                                                   aGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCa                                     >  2:2996165/1‑93 (MQ=255)

                                                   aGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCa                                     >  2:7142554/1‑93 (MQ=255)

                                                   aGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCa                                     >  2:3631789/1‑93 (MQ=255)

                                                    ggatggatTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCaa                                    <  1:4487875/93‑1 (MQ=255)

                                                    ggatggatTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCaa                                    <  1:2005697/93‑1 (MQ=255)

                                                    ggatggatTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCaa                                    >  1:100640/1‑93 (MQ=255)

                                                     gatggatTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAAc                                   >  2:5376258/1‑93 (MQ=255)

                                                     gatggatTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAAc                                   <  2:6146273/93‑1 (MQ=255)

                                                      atggatTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAAcc                                  <  1:5254464/93‑1 (MQ=255)

                                                         gatTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTcc                               <  2:2033528/93‑1 (MQ=255)

                                                         gatTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTcc                               <  2:3440737/93‑1 (MQ=255)

                                                          atTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCg                              >  1:5754995/1‑93 (MQ=255)

                                                           tttGGTTTCCTCCGTTCCGCAGACTGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGc                             >  2:7585194/1‑93 (MQ=255)

                                                            ttGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCa                            <  1:3623851/93‑1 (MQ=255)

                                                             tGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCAc                           <  1:7371268/93‑1 (MQ=255)

                                                             tGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCAc                           <  1:5351076/93‑1 (MQ=255)

                                                             tGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCAc                           <  2:7402534/93‑1 (MQ=255)

                                                             tGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCAc                           <  2:1796221/93‑1 (MQ=255)

                                                             tGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCAc                           <  2:7892088/93‑1 (MQ=255)

                                                             tGGTGTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCAc                           <  1:4275481/93‑1 (MQ=255)

                                                                tttCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTgg                        <  2:159637/93‑1 (MQ=255)

                                                                  tcctccGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTg                      >  2:4259929/1‑93 (MQ=255)

                                                                    ctccGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGAt                    <  2:6651604/93‑1 (MQ=255)

                                                                       cGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATAcc                 >  1:748785/1‑93 (MQ=255)

                                                                       cGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATAcc                 <  1:7749957/93‑1 (MQ=255)

                                                                        gtcccGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCa                <  2:5886271/90‑1 (MQ=255)

                                                                        gTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCa                <  2:1893566/93‑1 (MQ=255)

                                                                          tCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCAtc              <  2:1408395/93‑1 (MQ=255)

                                                                          tCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCAtc              <  2:6294302/93‑1 (MQ=255)

                                                                          tCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCAtc              <  1:479779/93‑1 (MQ=255)

                                                                          tCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCAtc              <  1:5972887/93‑1 (MQ=255)

                                                                             gCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATctct           >  1:6686363/1‑93 (MQ=255)

                                                                              cAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTg          <  1:3373979/93‑1 (MQ=255)

                                                                                gACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGt        <  2:6400959/93‑1 (MQ=255)

                                                                                gACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGt        >  2:7805953/1‑93 (MQ=255)

                                                                                gACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGt        >  1:5550996/1‑93 (MQ=255)

                                                                                gACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGt        >  1:5013134/1‑93 (MQ=255)

                                                                                  cAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTaa      >  1:2151108/1‑93 (MQ=255)

                                                                                   aGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCCACCTCAGCCCTGGTGATACCATCTCTGGTAAg     >  1:3257192/1‑93 (MQ=255)

                                                                                    gCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGa    <  1:7262497/93‑1 (MQ=255)

                                                                                    gCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGa    <  1:2730478/93‑1 (MQ=255)

                                                                                    gCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGa    >  1:2540630/1‑93 (MQ=255)

                                                                                     cTCCCACCTCACCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGAt   <  1:1841440/93‑1 (MQ=255)

                                                                                      tCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGAtt  <  1:7593030/93‑1 (MQ=255)

                                                                                      tCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGAtt  >  1:2026239/1‑93 (MQ=255)

ACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATT  >  NC_000913/3964156‑3964334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 208 total aligned reads displayed.

GCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCC  >  NC_000913/3964154‑3964338

GCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGTTGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCAC                                                                                             <  SRR4302543.3462243/94‑1 (MQ=60)

GCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCAC                                                                                             <  SRR4302543.2909035/94‑1 (MQ=60)

 CACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACC                                                                                            >  SRR4302543.624532/1‑94 (MQ=60)

  ACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCT                                                                                           <  SRR4302543.4682545/94‑1 (MQ=60)

  ACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCT                                                                                           >  SRR4302543.1728874/1‑94 (MQ=60)

  ACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCT                                                                                           <  SRR4302543.7838665/94‑1 (MQ=60)

   CGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTC                                                                                          >  SRR4302543.3080021/1‑94 (MQ=60)

   CGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTC                                                                                          >  SRR4302543.400796/1‑94 (MQ=60)

   CGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTC                                                                                          >  SRR4302543.2447229/1‑94 (MQ=60)

   CGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTC                                                                                          >  SRR4302543.6777775/1‑94 (MQ=60)

   CGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTC                                                                                          >  SRR4302543.7528825/1‑94 (MQ=60)

    GCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGTAGGATGGATTCGGTTTCATCCGTTCCTCAGACCGCTCCAACCTCC                                                                                         >  SRR4302543.807811/1‑94 (MQ=60)

    GCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGCTAGCTCCCACCTCG                                                                                         >  SRR4302543.7653053/1‑94 (MQ=60)

    GCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCG                                                                                         >  SRR4302543.6721205/1‑94 (MQ=60)

    GCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCG                                                                                         >  SRR4302543.7653055/1‑94 (MQ=60)

    GCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCG                                                                                         >  SRR4302543.807810/1‑94 (MQ=60)

    GCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCG                                                                                         <  SRR4302543.185469/94‑1 (MQ=60)

    GCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCC                                                                                         >  SRR4302543.3252251/1‑94 (MQ=60)

     CAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGC                                                                                        >  SRR4302543.7864812/1‑94 (MQ=60)

     CAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGC                                                                                        <  SRR4302543.300447/94‑1 (MQ=60)

     CAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGC                                                                                        <  SRR4302543.3775068/94‑1 (MQ=60)

     CAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGC                                                                                        >  SRR4302543.7297664/1‑94 (MQ=60)

     CAAAGAGTGGCGAAGATATCTTTGGTGATGGCGGACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGC                                                                                        >  SRR4302543.263063/1‑94 (MQ=60)

      AAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTGCTCCGTTCCGCAGACAGCTCCCACCTCGCC                                                                                       >  SRR4302543.7521255/1‑94 (MQ=60)

      AAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCC                                                                                       >  SRR4302543.4699992/1‑94 (MQ=60)

      AAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCC                                                                                       <  SRR4302543.239165/94‑1 (MQ=60)

      AAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCC                                                                                       >  SRR4302543.2381893/1‑94 (MQ=60)

       AAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCG                                                                                      <  SRR4302543.3124154/94‑1 (MQ=60)

       AAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCG                                                                                      <  SRR4302543.3039446/94‑1 (MQ=60)

        AGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGG                                                                                     >  SRR4302543.7868436/1‑94 (MQ=60)

        AGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGG                                                                                     <  SRR4302543.1630432/94‑1 (MQ=60)

        AGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGG                                                                                     >  SRR4302543.583911/1‑94 (MQ=60)

         GAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGT                                                                                    >  SRR4302543.6025666/1‑94 (MQ=60)

          AGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTC                                                                                   <  SRR4302543.2668114/94‑1 (MQ=60)

          AGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTC                                                                                   <  SRR4302543.4832153/94‑1 (MQ=60)

           GTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCC                                                                                  >  SRR4302543.3844881/1‑94 (MQ=60)

            TGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCT                                                                                 <  SRR4302543.7293399/94‑1 (MQ=60)

             GGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTG                                                                                <  SRR4302543.2832574/94‑1 (MQ=60)

             GGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTG                                                                                <  SRR4302543.7930641/94‑1 (MQ=60)

             GGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTG                                                                                <  SRR4302543.7558402/94‑1 (MQ=60)

               CGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGAT                                                                              <  SRR4302543.220490/94‑1 (MQ=60)

               CGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGAT                                                                              <  SRR4302543.3126914/94‑1 (MQ=60)

                GAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCGTGATG                                                                             >  SRR4302543.7016162/1‑94 (MQ=60)

                GAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATG                                                                             <  SRR4302543.4663262/94‑1 (MQ=60)

                GAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCACACAGCTCCCAACTCCCCGGTCCTGATG                                                                             >  SRR4302543.5344525/1‑94 (MQ=60)

                 AAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGA                                                                            >  SRR4302543.1290057/1‑94 (MQ=60)

                   GATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACA                                                                          >  SRR4302543.1490440/1‑94 (MQ=60)

                    ATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGAGAT                                                                         <  SRR4302543.4551301/94‑1 (MQ=60)

                    ATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACAT                                                                         >  SRR4302543.926595/1‑94 (MQ=60)

                    ATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACAT                                                                         >  SRR4302543.1501511/1‑94 (MQ=60)

                    ATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACAT                                                                         >  SRR4302543.3374151/1‑94 (MQ=60)

                    ATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACAT                                                                         >  SRR4302543.133778/1‑94 (MQ=60)

                    ATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTACTGATGACAT                                                                         >  SRR4302543.1981926/1‑94 (MQ=60)

                    ATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTACCCCCTCGCCGGTCCTGATGACAT                                                                         <  SRR4302543.7981129/94‑1 (MQ=60)

                     TATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATC                                                                        >  SRR4302543.6137938/1‑94 (MQ=60)

                      ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCT                                                                       >  SRR4302543.5902615/1‑94 (MQ=60)

                      ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCT                                                                       >  SRR4302543.7236040/1‑94 (MQ=60)

                      ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCT                                                                       >  SRR4302543.7374018/1‑94 (MQ=60)

                      ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCT                                                                       >  SRR4302543.1114391/1‑94 (MQ=60)

                       TCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTA                                                                      >  SRR4302543.4220665/1‑94 (MQ=60)

                        CTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGCTTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCTGGTCCTGCTGACATCTAC                                                                     >  SRR4302543.4824438/1‑94 (MQ=60)

                        CTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTAC                                                                     >  SRR4302543.4848579/1‑94 (MQ=60)

                        CTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTAC                                                                     >  SRR4302543.4265348/1‑94 (MQ=60)

                        CTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTAC                                                                     >  SRR4302543.4824439/1‑94 (MQ=60)

                         TTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACG                                                                    >  SRR4302543.5411986/1‑94 (MQ=60)

                         TTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACG                                                                    <  SRR4302543.503598/94‑1 (MQ=60)

                         TTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACG                                                                    <  SRR4302543.4608883/94‑1 (MQ=60)

                           TGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTT                                                                  >  SRR4302543.7206158/1‑94 (MQ=60)

                           TGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTT                                                                  <  SRR4302543.3957965/94‑1 (MQ=60)

                           TGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTT                                                                  >  SRR4302543.2439127/1‑94 (MQ=60)

                            GGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTT                                                                 <  SRR4302543.4608429/94‑1 (MQ=60)

                            GGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTT                                                                 >  SRR4302543.4309590/1‑94 (MQ=60)

                            GGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCACCCACCTCGCCGGTCCTGATGACATCTACGTTT                                                                 >  SRR4302543.7715164/1‑94 (MQ=60)

                             GTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTC                                                                >  SRR4302543.4619202/1‑94 (MQ=60)

                             GTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTC                                                                >  SRR4302543.4619203/1‑94 (MQ=60)

                              TGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCC                                                               >  SRR4302543.7502144/1‑94 (MQ=60)

                              TGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCC                                                               <  SRR4302543.259999/94‑1 (MQ=60)

                              TGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCC                                                               <  SRR4302543.1549335/94‑1 (MQ=60)

                              TGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCC                                                               >  SRR4302543.6095391/1‑94 (MQ=60)

                              TGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCC                                                               >  SRR4302543.3953712/1‑94 (MQ=60)

                              TGAGGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCC                                                               <  SRR4302543.6698609/94‑1 (MQ=60)

                               GATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCC                                                              <  SRR4302543.1846635/94‑1 (MQ=60)

                                ATGGCGTCCTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCC                                                             <  SRR4302543.174141/94‑1 (MQ=60)

                                ATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGAACTCTACGTTTCCCC                                                             >  SRR4302543.2399045/1‑94 (MQ=60)

                                 TGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCT                                                            <  SRR4302543.3392121/94‑1 (MQ=60)

                                 TGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCT                                                            <  SRR4302543.3132972/94‑1 (MQ=60)

                                 TGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCT                                                            >  SRR4302543.1622805/1‑94 (MQ=60)

                                  GGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTA                                                           <  SRR4302543.7057265/94‑1 (MQ=60)

                                    CGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGC                                                         <  SRR4302543.6361239/94‑1 (MQ=60)

                                     GTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCC                                                        >  SRR4302543.6686081/1‑94 (MQ=60)

                                     GTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCC                                                        >  SRR4302543.6686080/1‑94 (MQ=60)

                                     GTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCC                                                        <  SRR4302543.7025148/94‑1 (MQ=60)

                                     GTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCC                                                        >  SRR4302543.3832236/1‑94 (MQ=60)

                                     GTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCC                                                        >  SRR4302543.3689586/1‑94 (MQ=60)

                                     GTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCC                                                        >  SRR4302543.1835137/1‑94 (MQ=60)

                                        CTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAA                                                     >  SRR4302543.3112748/1‑94 (MQ=60)

                                        CTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAA                                                     >  SRR4302543.4845789/1‑94 (MQ=60)

                                         TGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAAT                                                    <  SRR4302543.6006377/94‑1 (MQ=60)

                                         TGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAAT                                                    <  SRR4302543.2408908/94‑1 (MQ=60)

                                           GAGATGTTGCAGGATGCATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCCCCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCC                                                  <  SRR4302543.602160/94‑1 (MQ=60)

                                           GAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCC                                                  <  SRR4302543.527224/94‑1 (MQ=60)

                                           GAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCC                                                  <  SRR4302543.602161/94‑1 (MQ=60)

                                            AGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCG                                                 <  SRR4302543.662774/94‑1 (MQ=60)

                                            AGAGATTCCAGGATGGATGTTGTTTCCGCCGTTCCGCAGACAGCTCCCCCCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCG                                                 <  SRR4302543.1692611/94‑1 (MQ=60)

                                              ATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCC                                               >  SRR4302543.485081/1‑94 (MQ=60)

                                                ATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGT                                             <  SRR4302543.7610642/94‑1 (MQ=60)

                                                 TTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTT                                            <  SRR4302543.2452952/94‑1 (MQ=60)

                                                  TGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTT                                           <  SRR4302543.5603768/94‑1 (MQ=60)

                                                  TGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTT                                           >  SRR4302543.164116/1‑94 (MQ=60)

                                                   GCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTC                                          <  SRR4302543.1808417/94‑1 (MQ=60)

                                                   GCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTC                                          <  SRR4302543.920295/94‑1 (MQ=60)

                                                    CAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCA                                         <  SRR4302543.4849982/94‑1 (MQ=60)

                                                     AGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAA                                        >  SRR4302543.101574/1‑94 (MQ=60)

                                                     AGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAA                                        >  SRR4302543.3133624/1‑94 (MQ=60)

                                                     AGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAA                                        >  SRR4302543.4487156/1‑94 (MQ=60)

                                                      GGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAAC                                       <  SRR4302543.3845099/94‑1 (MQ=60)

                                                      GGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAAC                                       <  SRR4302543.2023722/94‑1 (MQ=60)

                                                      GGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAAC                                       <  SRR4302543.4125660/94‑1 (MQ=60)

                                                      GGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAAC                                       <  SRR4302543.4528641/94‑1 (MQ=60)

                                                       GATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACC                                      <  SRR4302543.2037088/94‑1 (MQ=60)

                                                        ATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCT                                     >  SRR4302543.2578040/1‑94 (MQ=60)

                                                        ATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCT                                     <  SRR4302543.5301852/94‑1 (MQ=60)

                                                          GGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCC                                   >  SRR4302543.6170024/1‑94 (MQ=60)

                                                          GGAGTTGGTTTCCTCCCTTCCGCAGACAGCGCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAAGCCGCCGTTTCAACCTCC                                   <  SRR4302543.1771576/94‑1 (MQ=60)

                                                           GATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCG                                  <  SRR4302543.1375870/94‑1 (MQ=60)

                                                           GATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCG                                  >  SRR4302543.5807441/1‑94 (MQ=60)

                                                           GATTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCG                                  <  SRR4302543.5637786/94‑1 (MQ=60)

                                                               TGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACT                              <  SRR4302543.5399501/94‑1 (MQ=60)

                                                               TGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACT                              <  SRR4302543.885384/94‑1 (MQ=60)

                                                               TGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACT                              <  SRR4302543.7442141/94‑1 (MQ=60)

                                                               TGGTGTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACT                              <  SRR4302543.4314342/94‑1 (MQ=60)

                                                                 tttttCTCCGTTCCGCAGACAGCTTCCACCTCGCCGGGCCTGATGACATCTtcggtttcctgatccaaatttgctgtttctaccttcgtatcgg                            >  SRR4302543.7110126/6‑51 (MQ=55)

                                                                 ggtttctgcgtcCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGCCATCTCCGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGG                            <  SRR4302543.7440454/82‑1 (MQ=60)

                                                                 GTTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGG                            >  SRR4302543.7546536/1‑94 (MQ=60)

                                                                 GTTCCCTCCGTCCCGCAGACAGCTCCTGCCTCTCCTGTCCTGATCACATCTACGTTCCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGG                            <  SRR4302543.4070600/94‑1 (MQ=60)

                                                                  TTTCCTCCGTTCCGCAGACAGCTCCCCCCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGT                           <  SRR4302543.1716633/94‑1 (MQ=60)

                                                                  TTTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGT                           >  SRR4302543.4309211/1‑94 (MQ=60)

                                                                   TTCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTG                          >  SRR4302543.7434715/1‑94 (MQ=60)

                                                                    TCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGA                         >  SRR4302543.272844/1‑94 (MQ=60)

                                                                    TCCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGCGA                         >  SRR4302543.5768472/1‑94 (MQ=60)

                                                                     CCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGAT                        >  SRR4302543.2082145/1‑94 (MQ=60)

                                                                     CCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGAT                        >  SRR4302543.551930/1‑94 (MQ=60)

                                                                     CCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGAT                        >  SRR4302543.3606285/1‑94 (MQ=60)

                                                                     CCTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGAT                        <  SRR4302543.3114041/94‑1 (MQ=60)

                                                                      CTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATA                       >  SRR4302543.6966612/1‑94 (MQ=60)

                                                                      CTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATA                       >  SRR4302543.4027104/1‑94 (MQ=60)

                                                                      CTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATA                       >  SRR4302543.2039465/1‑94 (MQ=60)

                                                                      CTCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATA                       >  SRR4302543.2836504/1‑94 (MQ=60)

                                                                       TCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATAC                      >  SRR4302543.7171165/1‑94 (MQ=60)

                                                                       TCCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATAC                      >  SRR4302543.2031632/1‑94 (MQ=60)

                                                                        CCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACC                     >  SRR4302543.755436/1‑94 (MQ=60)

                                                                        CCGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACC                     >  SRR4302543.1336848/1‑94 (MQ=60)

                                                                         CGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCA                    <  SRR4302543.4086879/94‑1 (MQ=60)

                                                                         CGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCA                    >  SRR4302543.7405634/1‑94 (MQ=60)

                                                                         CGTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCA                    <  SRR4302543.7823142/94‑1 (MQ=60)

                                                                          GTTCCGCAGACAGCTCCCACCTCGCCTGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCAT                   <  SRR4302543.2435187/94‑1 (MQ=60)

                                                                          GTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCAT                   >  SRR4302543.3998563/1‑94 (MQ=60)

                                                                          GTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCAT                   >  SRR4302543.456002/1‑94 (MQ=60)

                                                                          GTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCAT                   <  SRR4302543.7706766/94‑1 (MQ=60)

                                                                          GTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCAT                   >  SRR4302543.390032/1‑94 (MQ=60)

                                                                          GTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCAT                   <  SRR4302543.5291508/94‑1 (MQ=60)

                                                                          GTTCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCAT                   >  SRR4302543.7877964/1‑94 (MQ=60)

                                                                            TCCGCAGACAGCTCCCACCTCTCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCT                 <  SRR4302543.5565809/94‑1 (MQ=60)

                                                                            TCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCT                 <  SRR4302543.6027597/94‑1 (MQ=60)

                                                                            TCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCT                 <  SRR4302543.6027598/94‑1 (MQ=60)

                                                                            TCCGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCT                 <  SRR4302543.484216/94‑1 (MQ=60)

                                                                              CGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCT               <  SRR4302543.4824787/94‑1 (MQ=60)

                                                                              CGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCT               >  SRR4302543.6749485/1‑94 (MQ=60)

                                                                              CGCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCT               >  SRR4302543.2466717/1‑94 (MQ=60)

                                                                               GCAGACAGCTCCCCCCTCGCCGGTCTTGATGACATCTACGTTTCCCCTAGCCAAAGCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTG              <  SRR4302543.3043541/94‑1 (MQ=60)

                                                                               GCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTG              <  SRR4302543.3043542/94‑1 (MQ=60)

                                                                               GCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTG              >  SRR4302543.3456786/1‑94 (MQ=60)

                                                                               GCAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTG              >  SRR4302543.5111044/1‑94 (MQ=60)

                                                                                CAGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGG             <  SRR4302543.3404271/94‑1 (MQ=60)

                                                                                 AGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGT            >  SRR4302543.5058757/1‑94 (MQ=60)

                                                                                 AGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGT            >  SRR4302543.5601477/1‑94 (MQ=60)

                                                                                 AGACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGT            >  SRR4302543.6158106/1‑94 (MQ=60)

                                                                                  GACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTA           >  SRR4302543.3933235/1‑94 (MQ=60)

                                                                                   ACAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAA          >  SRR4302543.2170370/1‑94 (MQ=60)

                                                                                    CAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCCACCTCAGCCCTGGTGATACCATCTCTGGTAAG         >  SRR4302543.3286634/1‑94 (MQ=60)

                                                                                    CAGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAG         <  SRR4302543.2099578/94‑1 (MQ=60)

                                                                                     AGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGA        >  SRR4302543.2563792/1‑94 (MQ=60)

                                                                                     AGCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGA        <  SRR4302543.4506206/94‑1 (MQ=60)

                                                                                      GCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGAT       <  SRR4302543.2755329/94‑1 (MQ=60)

                                                                                      GCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGAT       <  SRR4302543.4918461/94‑1 (MQ=60)

                                                                                      GCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGAT       <  SRR4302543.7332669/94‑1 (MQ=60)

                                                                                      GCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGAT       <  SRR4302543.6677612/94‑1 (MQ=60)

                                                                                      GCTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGAT       <  SRR4302543.1941820/94‑1 (MQ=60)

                                                                                       CTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCGACCTCCGCACTGGTGATACCATCTCTGGTAAGATT      >  SRR4302543.1257562/1‑94 (MQ=60)

                                                                                       CTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATT      >  SRR4302543.2044448/1‑94 (MQ=60)

                                                                                       CTCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATT      >  SRR4302543.3389159/1‑94 (MQ=60)

                                                                                       CTCCCACCTCACCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATT      <  SRR4302543.1858005/94‑1 (MQ=60)

                                                                                        TCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTC     >  SRR4302543.6489937/1‑94 (MQ=60)

                                                                                        TCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTC     <  SRR4302543.7726798/94‑1 (MQ=60)

                                                                                        TCCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTC     <  SRR4302543.7665169/94‑1 (MQ=60)

                                                                                         CCCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCG    <  SRR4302543.1313632/94‑1 (MQ=60)

                                                                                          CCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGC   >  SRR4302543.5207030/1‑94 (MQ=60)

                                                                                          CCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGC   >  SRR4302543.7103047/1‑94 (MQ=60)

                                                                                          CCACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGC   >  SRR4302543.12860/1‑94 (MQ=60)

                                                                                           CACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCC  >  SRR4302543.6199121/1‑94 (MQ=60)

GCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCC  >  NC_000913/3964154‑3964338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`