Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,969,820 C→T R317C (CGC→TGC)  wecC → UDP‑N‑acetyl‑D‑mannosaminuronic acid dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,969,8200CT99.7% 1312.6 / NA 365R317C (CGC→TGC) wecCUDP‑N‑acetyl‑D‑mannosaminuronic acid dehydrogenase
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base T (154/210);  total (154/211)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 384 total aligned reads displayed.

ACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCT  >  NC_000913/3969730‑3969909
                                                                                          |                                                                                         
aCCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAAtgc                                                                                         >  1:7317406/1‑93 (MQ=255)
   gcgcgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGcc                                                                                      >  1:6380284/1‑93 (MQ=255)
    cgcgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCa                                                                                     <  1:2769310/93‑1 (MQ=255)
      cgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGt                                                                                   >  2:6058412/1‑93 (MQ=255)
       gcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTg                                                                                  >  1:5509117/1‑93 (MQ=255)
          aaGTGAACGATCACAAAGCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAAc                                                                               <  2:4723337/93‑1 (MQ=255)
           aGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGGGAAAGCGGCGGCGGCTGATTGCCTGGCGGGTACCGATGAATGCGCCAGTGAACt                                                                              >  2:4407437/1‑93 (MQ=255)
            gTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTg                                                                             >  2:3474118/1‑93 (MQ=255)
            gTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTg                                                                             <  2:402578/93‑1 (MQ=255)
            gTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGACAAATGCGCCAGTGAACTg                                                                             <  1:1773794/93‑1 (MQ=255)
             tGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGa                                                                            >  1:1693753/1‑93 (MQ=255)
              gAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGaa                                                                           <  2:4636909/93‑1 (MQ=255)
                aCGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGaaaa                                                                         >  1:4712654/1‑93 (MQ=255)
                  gATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATc                                                                       >  2:5445779/1‑93 (MQ=255)
                   aTCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCg                                                                      >  1:260318/1‑93 (MQ=255)
                    tCACAAACCGTTCTGGGATATCGATCAGGTGAAAGCGGCGGTGGCTGATGGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGc                                                                     >  2:7031547/1‑93 (MQ=255)
                     cacaAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGcc                                                                    >  2:5227280/1‑93 (MQ=255)
                     cacaAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGcc                                                                    >  2:2766067/1‑93 (MQ=255)
                      acaAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCt                                                                   >  2:6245499/1‑93 (MQ=255)
                       caAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTg                                                                  <  1:5812938/93‑1 (MQ=255)
                        aaaCCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGc                                                                 >  2:7547095/1‑93 (MQ=255)
                        aaaCCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGc                                                                 >  1:6242594/1‑93 (MQ=255)
                         aaCCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCt                                                                >  1:668331/1‑93 (MQ=255)
                         aaCCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCt                                                                >  2:3142310/1‑93 (MQ=255)
                           ccGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCttt                                                              <  1:3520166/93‑1 (MQ=255)
                            cGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTg                                                             >  1:4023372/1‑93 (MQ=255)
                            cGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTg                                                             <  2:6405470/93‑1 (MQ=255)
                             gTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTgg                                                            <  1:2393541/93‑1 (MQ=255)
                              ttCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGt                                                           <  1:7209432/93‑1 (MQ=255)
                              ttCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGt                                                           >  1:6956156/1‑93 (MQ=255)
                              ttCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGt                                                           >  1:1953326/1‑93 (MQ=255)
                              ttCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGt                                                           >  1:1304391/1‑93 (MQ=255)
                               tCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTc                                                          <  2:3638914/93‑1 (MQ=255)
                               tCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTc                                                          <  1:2558401/93‑1 (MQ=255)
                                cTGGTTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCt                                                         <  2:3518085/93‑1 (MQ=255)
                                 tGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTg                                                        >  2:2355853/1‑93 (MQ=255)
                                 tGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTg                                                        <  2:814604/93‑1 (MQ=255)
                                 tGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTg                                                        <  1:3246027/93‑1 (MQ=255)
                                  gggTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTgg                                                       >  2:632706/1‑93 (MQ=255)
                                   ggTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGc                                                      >  2:483845/1‑93 (MQ=255)
                                   ggTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGc                                                      <  1:5695907/93‑1 (MQ=255)
                                    gTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCg                                                     >  1:795717/1‑93 (MQ=255)
                                    gTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCg                                                     <  2:7071291/93‑1 (MQ=255)
                                      tATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGtt                                                   <  1:5921706/93‑1 (MQ=255)
                                      tATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGtt                                                   <  1:6549163/93‑1 (MQ=255)
                                       aTCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGttt                                                  >  1:7102422/1‑93 (MQ=255)
                                       aTCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGttt                                                  >  2:5331700/1‑93 (MQ=255)
                                       aTCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGACAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGttt                                                  >  1:3062251/1‑93 (MQ=255)
                                          gATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTaaa                                               <  1:5558812/93‑1 (MQ=255)
                                          gATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTaaa                                               >  2:7726379/1‑93 (MQ=255)
                                          gATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTaaa                                               <  1:3909481/93‑1 (MQ=255)
                                           aTCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAAc                                              >  2:725862/1‑93 (MQ=255)
                                           aTCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAAc                                              >  1:4416556/1‑93 (MQ=255)
                                           aTCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAAc                                              >  2:5949115/1‑93 (MQ=255)
                                            tCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAAcc                                             >  1:3444262/1‑93 (MQ=255)
                                            tCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAAcc                                             <  1:3361682/93‑1 (MQ=255)
                                               ggTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGaa                                          <  2:2039184/93‑1 (MQ=255)
                                               ggTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGaa                                          >  2:5652828/1‑93 (MQ=255)
                                               ggTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGaa                                          <  1:5134308/93‑1 (MQ=255)
                                               ggTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGaa                                          <  2:5063031/93‑1 (MQ=255)
                                                gTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAat                                         <  2:6748129/93‑1 (MQ=255)
                                                gTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAat                                         >  1:4951207/1‑93 (MQ=255)
                                                 tGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAata                                        <  2:1265549/93‑1 (MQ=255)
                                                 tGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAata                                        <  1:7402658/93‑1 (MQ=255)
                                                 tGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAata                                        <  2:7404468/93‑1 (MQ=255)
                                                 tGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAata                                        <  1:4601947/93‑1 (MQ=255)
                                                 tGAAAGCGGCGGTGGCTGATTGCCTGGAGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAata                                        >  2:1473839/1‑93 (MQ=255)
                                                   aaaGCGGCGGGGGGTGATTGCCTGGCGGCTACCCATAAATGCGCCAGTGAACTGAAAAACGCCTGCTTTTGGCTGGCGGTTTAACCGAATAtt                                      >  2:288887/1‑93 (MQ=255)
                                                     aGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATtga                                    <  2:2233231/93‑1 (MQ=255)
                                                     aGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATtga                                    <  2:3828369/93‑1 (MQ=255)
                                                      gcggcgGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATtgat                                   >  1:1012505/1‑93 (MQ=255)
                                                      gcggcgGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATtgat                                   <  1:646548/93‑1 (MQ=255)
                                                        ggcggTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATtgatga                                 <  2:6092841/93‑1 (MQ=255)
                                                        ggcggTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATtgatga                                 >  2:3312900/1‑93 (MQ=255)
                                                        ggcggTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATtgatga                                 >  2:1796886/1‑93 (MQ=255)
                                                         gcggTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGATTATACCGAATATTGATGAc                                >  1:4085101/1‑93 (MQ=255)
                                                          cggTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGAcc                               >  2:2922682/1‑93 (MQ=255)
                                                          cggTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGAcc                               <  2:1705195/93‑1 (MQ=255)
                                                           ggTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCt                              <  2:6916980/93‑1 (MQ=255)
                                                           ggTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCt                              <  1:2295182/93‑1 (MQ=255)
                                                           ggTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCt                              <  1:6648185/93‑1 (MQ=255)
                                                             tGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTgc                            <  1:4280146/93‑1 (MQ=255)
                                                              ggCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTgcg                           <  1:5323887/93‑1 (MQ=255)
                                                               gCTGATTGCCTGGCGGCTACCGATAAATGCGCCGGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTgcgc                          <  1:7636345/93‑1 (MQ=255)
                                                                  gATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGaa                       <  1:875746/93‑1 (MQ=255)
                                                                    ttGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAg                     >  1:2061770/1‑93 (MQ=255)
                                                                      gCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGcc                   <  1:1471481/93‑1 (MQ=255)
                                                                      gCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGcc                   >  2:4188634/1‑93 (MQ=255)
                                                                      gCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGcc                   >  1:5852361/1‑93 (MQ=255)
                                                                        cTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCg                 >  1:3651962/1‑93 (MQ=255)
                                                                         tGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCgg                <  2:2088147/93‑1 (MQ=255)
                                                                            cggcTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGa             <  2:2480077/93‑1 (MQ=255)
                                                                             ggcTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGag            >  1:6042816/1‑92 (MQ=255)
                                                                             ggcTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGAt            >  1:2170823/1‑93 (MQ=255)
                                                                              gccaCCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATg           <  2:6637124/90‑1 (MQ=255)
                                                                              gcTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATg           <  2:538764/93‑1 (MQ=255)
                                                                                tACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGa         >  1:2714278/1‑93 (MQ=255)
                                                                                tACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGa         <  2:113473/93‑1 (MQ=255)
                                                                                tACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGa         >  2:42500/1‑93 (MQ=255)
                                                                                    gATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATc     >  1:7848544/1‑93 (MQ=255)
                                                                                          |                                                                                         
ACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCT  >  NC_000913/3969730‑3969909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 219 total aligned reads displayed.
CGTACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGA  >  NC_000913/3969727‑3969911
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CGTACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAAT                                                                                             <  SRR4302543.2192020/94‑1 (MQ=60)
CGTACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAAT                                                                                             >  SRR4302543.2158194/1‑94 (MQ=60)
CGTACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAAT                                                                                             <  SRR4302543.2676736/94‑1 (MQ=60)
CGTACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAAT                                                                                             <  SRR4302543.7455514/94‑1 (MQ=60)
CGTACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAAT                                                                                             >  SRR4302543.4913747/1‑94 (MQ=60)
CGTACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAAT                                                                                             >  SRR4302543.4566581/1‑94 (MQ=60)
CGTACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTCCCTGGCGGCTACCGATAAAT                                                                                             <  SRR4302543.3880681/94‑1 (MQ=60)
 GTACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATG                                                                                            <  SRR4302543.7353626/94‑1 (MQ=60)
  TCCCGCGCGCGAAGTGAACGATCACAATCCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGC                                                                                           <  SRR4302543.1526143/94‑1 (MQ=60)
  TACCGCGCGCGAAGTGAACGATCACAAACCGTCCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAAGGC                                                                                           >  SRR4302543.7242907/1‑94 (MQ=60)
   ACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCG                                                                                          >  SRR4302543.6104739/1‑94 (MQ=60)
   ACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCG                                                                                          >  SRR4302543.2953036/1‑94 (MQ=60)
     CGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCC                                                                                        >  SRR4302543.2620425/1‑94 (MQ=60)
     CGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCC                                                                                        >  SRR4302543.6440314/1‑94 (MQ=60)
      gatcggtctcggcattcctgctgaaccgctcttccgatctccactcTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCA                                                                                       <  SRR4302543.176918/48‑1 (MQ=60)
      GCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCA                                                                                       <  SRR4302543.5804273/94‑1 (MQ=60)
       CGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAG                                                                                      <  SRR4302543.2794512/94‑1 (MQ=60)
        GCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGT                                                                                     <  SRR4302543.6840242/94‑1 (MQ=60)
        GCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGT                                                                                     <  SRR4302543.7870488/94‑1 (MQ=60)
         CGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTG                                                                                    >  SRR4302543.5559134/1‑94 (MQ=60)
         CGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTG                                                                                    <  SRR4302543.3933171/94‑1 (MQ=60)
           CGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAA                                                                                  >  SRR4302543.5976806/1‑94 (MQ=60)
           CGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAA                                                                                  >  SRR4302543.2045782/1‑94 (MQ=60)
            GAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAAC                                                                                 >  SRR4302543.2537915/1‑94 (MQ=60)
            GAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAAC                                                                                 >  SRR4302543.3038898/1‑94 (MQ=60)
              AGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTG                                                                               <  SRR4302543.1926915/94‑1 (MQ=60)
              AGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTG                                                                               >  SRR4302543.69050/1‑94 (MQ=60)
               GTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGA                                                                              >  SRR4302543.1708946/1‑94 (MQ=60)
               GTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGA                                                                              >  SRR4302543.2360273/1‑94 (MQ=60)
               GTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGA                                                                              >  SRR4302543.7983420/1‑94 (MQ=60)
               GTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGACAAATGCGCCAGTGAACTGA                                                                              <  SRR4302543.1789648/94‑1 (MQ=60)
                TGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAA                                                                             <  SRR4302543.2517692/94‑1 (MQ=60)
                TGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAA                                                                             >  SRR4302543.6083062/1‑94 (MQ=60)
                TGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAA                                                                             >  SRR4302543.4895164/1‑94 (MQ=60)
                TGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTCGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAA                                                                             >  SRR4302543.1430955/1‑94 (MQ=60)
                  AACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAA                                                                           >  SRR4302543.4755721/1‑94 (MQ=60)
                  AACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAA                                                                           >  SRR4302543.7998638/1‑94 (MQ=60)
                   ACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAAT                                                                          >  SRR4302543.6290320/1‑94 (MQ=60)
                   ACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAAT                                                                          <  SRR4302543.5897682/94‑1 (MQ=60)
                    CGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATC                                                                         >  SRR4302543.3403215/1‑94 (MQ=60)
                    CGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATC                                                                         <  SRR4302543.7250052/94‑1 (MQ=60)
                    CGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATC                                                                         >  SRR4302543.5571045/1‑94 (MQ=60)
                     GATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCG                                                                        >  SRR4302543.262596/1‑94 (MQ=60)
                      ATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGC                                                                       >  SRR4302543.3507964/1‑94 (MQ=60)
                      ATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGC                                                                       <  SRR4302543.7475677/94‑1 (MQ=60)
                      ATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGC                                                                       >  SRR4302543.1409390/1‑94 (MQ=60)
                         ACAAACCGTTCTGCGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTG                                                                    <  SRR4302543.3996885/94‑1 (MQ=60)
                          CAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGC                                                                   >  SRR4302543.6301488/1‑94 (MQ=60)
                          CAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGC                                                                   <  SRR4302543.5865797/94‑1 (MQ=60)
                           AAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCT                                                                  >  SRR4302543.674490/1‑94 (MQ=60)
                             ACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTT                                                                >  SRR4302543.2676663/1‑94 (MQ=60)
                             ACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTT                                                                <  SRR4302543.4961245/94‑1 (MQ=60)
                             ACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTT                                                                <  SRR4302543.565087/94‑1 (MQ=60)
                              CCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTG                                                               >  SRR4302543.5392100/1‑94 (MQ=60)
                              CCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTG                                                               <  SRR4302543.3551582/94‑1 (MQ=60)
                              CCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTG                                                               <  SRR4302543.5038824/94‑1 (MQ=60)
                              CCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGATA‑CGATAAATGCGCCAGTGAACTGAAAATACACTGCTTTGG                                                              >  SRR4302543.4059316/1‑94 (MQ=60)
                               CGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGG                                                              <  SRR4302543.5786684/94‑1 (MQ=60)
                               CGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGG                                                              <  SRR4302543.2409819/94‑1 (MQ=60)
                               CGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGG                                                              <  SRR4302543.6171925/94‑1 (MQ=60)
                                GTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGT                                                             >  SRR4302543.1970846/1‑94 (MQ=60)
                                GTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGT                                                             >  SRR4302543.7021601/1‑94 (MQ=60)
                                GTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGT                                                             <  SRR4302543.2415198/94‑1 (MQ=60)
                                GTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGT                                                             >  SRR4302543.1315973/1‑94 (MQ=60)
                                 TTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTC                                                            <  SRR4302543.5888210/94‑1 (MQ=60)
                                 TTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTC                                                            >  SRR4302543.2757881/1‑94 (MQ=60)
                                 TTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTC                                                            <  SRR4302543.7279320/94‑1 (MQ=60)
                                 TTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTC                                                            <  SRR4302543.1710281/94‑1 (MQ=60)
                                  TCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCT                                                           <  SRR4302543.2581784/94‑1 (MQ=60)
                                  TCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCT                                                           <  SRR4302543.2075976/94‑1 (MQ=60)
                                   CTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTG                                                          >  SRR4302543.4266206/1‑94 (MQ=60)
                                   CTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTG                                                          >  SRR4302543.2618131/1‑94 (MQ=60)
                                   CTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTG                                                          >  SRR4302543.6923567/1‑94 (MQ=60)
                                    TGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGG                                                         <  SRR4302543.3477569/94‑1 (MQ=60)
                                    TGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGG                                                         <  SRR4302543.3275380/94‑1 (MQ=60)
                                    TGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGG                                                         <  SRR4302543.389775/94‑1 (MQ=60)
                                     GGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGC                                                        <  SRR4302543.4296236/94‑1 (MQ=60)
                                      GGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCG                                                       <  SRR4302543.7651343/94‑1 (MQ=60)
                                      GGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCG                                                       <  SRR4302543.5747870/94‑1 (MQ=60)
                                      GGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCG                                                       <  SRR4302543.508706/94‑1 (MQ=60)
                                      GGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCG                                                       >  SRR4302543.802713/1‑94 (MQ=60)
                                       GTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGT                                                      >  SRR4302543.7117251/1‑94 (MQ=60)
                                         TATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTT                                                    <  SRR4302543.6449173/94‑1 (MQ=60)
                                         TATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTT                                                    <  SRR4302543.6610595/94‑1 (MQ=60)
                                         TATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTT                                                    <  SRR4302543.6610806/94‑1 (MQ=60)
                                         TATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTT                                                    >  SRR4302543.3089792/1‑94 (MQ=60)
                                         TATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTT                                                    <  SRR4302543.5975810/94‑1 (MQ=60)
                                         TATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTT                                                    >  SRR4302543.7171407/1‑94 (MQ=60)
                                         TATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGACAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTT                                                    >  SRR4302543.3089793/1‑94 (MQ=60)
                                          ATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTA                                                   >  SRR4302543.1958892/1‑94 (MQ=60)
                                          ATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTA                                                   <  SRR4302543.4343942/94‑1 (MQ=60)
                                           TCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAA                                                  <  SRR4302543.4083659/94‑1 (MQ=60)
                                           TCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAA                                                  <  SRR4302543.4082036/94‑1 (MQ=60)
                                           TCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAA                                                  >  SRR4302543.3197640/1‑94 (MQ=60)
                                           TCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAA                                                  <  SRR4302543.3437039/94‑1 (MQ=60)
                                            CGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAA                                                 <  SRR4302543.1751525/94‑1 (MQ=60)
                                             GATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGTGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAAC                                                <  SRR4302543.7345309/94‑1 (MQ=60)
                                             GATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAAC                                                >  SRR4302543.5521789/1‑94 (MQ=60)
                                             GATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAAC                                                >  SRR4302543.4456589/1‑94 (MQ=60)
                                             GATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAAC                                                >  SRR4302543.3971649/1‑94 (MQ=60)
                                             GATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAAC                                                <  SRR4302543.3943995/94‑1 (MQ=60)
                                             GATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAAC                                                <  SRR4302543.5609361/94‑1 (MQ=60)
                                             GATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAAC                                                >  SRR4302543.3586260/1‑94 (MQ=60)
                                              ATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACC                                               >  SRR4302543.1190650/1‑94 (MQ=60)
                                              ATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACC                                               <  SRR4302543.7931550/94‑1 (MQ=60)
                                              ATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACC                                               >  SRR4302543.3475103/1‑94 (MQ=60)
                                               TCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCG                                              <  SRR4302543.3391914/94‑1 (MQ=60)
                                               TCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCG                                              <  SRR4302543.3309210/94‑1 (MQ=60)
                                                CCGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGA                                             <  SRR4302543.2398036/94‑1 (MQ=60)
                                                CAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGA                                             >  SRR4302543.4647407/1‑94 (MQ=60)
                                                 AGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAA                                            <  SRR4302543.2767273/94‑1 (MQ=60)
                                                 AGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAA                                            >  SRR4302543.1598929/1‑94 (MQ=60)
                                                 AGGTGAAAGCGGCGGAGGCTGATTGCCTGGAGGCTACCGATAAATGCGACAGTGAACTGAAAATCAACTGCTTTGGTCTGGCGTTTAAACCGAA                                            >  SRR4302543.1053368/1‑94 (MQ=60)
                                                  GGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAT                                           <  SRR4302543.5915930/94‑1 (MQ=60)
                                                  GGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAT                                           <  SRR4302543.5180717/94‑1 (MQ=60)
                                                  GGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAT                                           >  SRR4302543.4996300/1‑94 (MQ=60)
                                                  GGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAT                                           <  SRR4302543.6661646/94‑1 (MQ=60)
                                                  GGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAT                                           <  SRR4302543.5538532/94‑1 (MQ=60)
                                                  GGTCAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAT                                           <  SRR4302543.3531291/94‑1 (MQ=60)
                                                    TGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATAT                                         <  SRR4302543.7473715/94‑1 (MQ=60)
                                                    TGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATAT                                         <  SRR4302543.4643749/94‑1 (MQ=60)
                                                    GGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATAT                                         <  SRR4302543.7335526/94‑1 (MQ=60)
                                                     GAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATT                                        >  SRR4302543.5573389/1‑94 (MQ=60)
                                                     GAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATT                                        <  SRR4302543.2711109/94‑1 (MQ=60)
                                                      AAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCTTTTAAACCGAATATTG                                       <  SRR4302543.2474789/94‑1 (MQ=60)
                                                      AAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTG                                       <  SRR4302543.1796046/94‑1 (MQ=60)
                                                      AAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTG                                       <  SRR4302543.4426776/94‑1 (MQ=60)
                                                      AAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTG                                       <  SRR4302543.6716279/94‑1 (MQ=60)
                                                        AGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGAT                                     >  SRR4302543.1021460/1‑94 (MQ=60)
                                                        AGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGAT                                     <  SRR4302543.7431822/94‑1 (MQ=60)
                                                         GCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATG                                    <  SRR4302543.652460/94‑1 (MQ=60)
                                                         GCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATG                                    <  SRR4302543.1241784/94‑1 (MQ=60)
                                                           GGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGAC                                  >  SRR4302543.6498573/1‑94 (MQ=60)
                                                           GGCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGATTATACCGAATATTGATGAC                                  >  SRR4302543.4121727/1‑94 (MQ=60)
                                                            GCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACC                                 <  SRR4302543.7395648/94‑1 (MQ=60)
                                                            GCGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACC                                 <  SRR4302543.6602243/94‑1 (MQ=60)
                                                             CGGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCT                                <  SRR4302543.5290019/94‑1 (MQ=60)
                                                              GGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTG                               <  SRR4302543.2316115/94‑1 (MQ=60)
                                                              GGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTG                               <  SRR4302543.7891/94‑1 (MQ=60)
                                                              GGTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTG                               <  SRR4302543.6710931/94‑1 (MQ=60)
                                                               GTGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGC                              <  SRR4302543.7278436/94‑1 (MQ=60)
                                                                TGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCG                             <  SRR4302543.4319047/94‑1 (MQ=60)
                                                                TGGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCG                             >  SRR4302543.3877809/1‑94 (MQ=60)
                                                                 GGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGCCCTGCGC                            >  SRR4302543.6461339/1‑94 (MQ=60)
                                                                 GGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGC                            <  SRR4302543.5372020/94‑1 (MQ=60)
                                                                 GGCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGC                            >  SRR4302543.2276653/1‑94 (MQ=60)
                                                                 GGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACTGAAAATCGCCAGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGC                            <  SRR4302543.6553641/94‑1 (MQ=60)
                                                                  GCTGATTGCCTGGCGGCTACCGATAAATGCGCCGGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCG                           <  SRR4302543.7708793/94‑1 (MQ=60)
                                                                  GCTGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCG                           <  SRR4302543.474115/94‑1 (MQ=60)
                                                                    TGATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAA                         >  SRR4302543.5807046/1‑94 (MQ=60)
                                                                     GATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAA                        <  SRR4302543.883538/94‑1 (MQ=60)
                                                                     GATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAA                        <  SRR4302543.596236/94‑1 (MQ=60)
                                                                     GATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAA                        >  SRR4302543.225994/1‑94 (MQ=60)
                                                                      ATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAG                       <  SRR4302543.7294098/94‑1 (MQ=60)
                                                                      ATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAG                       >  SRR4302543.2080210/1‑94 (MQ=60)
                                                                      ATTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAG                       <  SRR4302543.3180014/94‑1 (MQ=60)
                                                                       TTGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGC                      <  SRR4302543.5245333/94‑1 (MQ=60)
                                                                        TGCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCC                     >  SRR4302543.5905615/1‑94 (MQ=60)
                                                                         GCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCC                    <  SRR4302543.1484735/94‑1 (MQ=60)
                                                                         GCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCC                    <  SRR4302543.4015006/94‑1 (MQ=60)
                                                                         GCCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCC                    <  SRR4302543.556124/94‑1 (MQ=60)
                                                                          GCTGGCGGCTACCGATAAACGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCG                   <  SRR4302543.6714992/94‑1 (MQ=60)
                                                                          CCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCG                   <  SRR4302543.6733064/94‑1 (MQ=60)
                                                                          CCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCG                   >  SRR4302543.3684045/1‑94 (MQ=60)
                                                                          CCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCG                   <  SRR4302543.4611624/94‑1 (MQ=60)
                                                                          CCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCG                   <  SRR4302543.7403607/94‑1 (MQ=60)
                                                                          CCTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCG                   <  SRR4302543.5364099/94‑1 (MQ=60)
                                                                           CTGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGG                  >  SRR4302543.639370/1‑94 (MQ=60)
                                                                            TGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGC                 <  SRR4302543.1650211/94‑1 (MQ=60)
                                                                            TGGCGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGC                 >  SRR4302543.3433885/1‑94 (MQ=60)
                                                                               CGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGAT              >  SRR4302543.2190271/1‑94 (MQ=60)
                                                                               CGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGAT              <  SRR4302543.4615509/94‑1 (MQ=60)
                                                                               CGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGAT              <  SRR4302543.4178080/94‑1 (MQ=60)
                                                                               CGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGAT              >  SRR4302543.6100005/1‑94 (MQ=60)
                                                                               CGGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGAG              >  SRR4302543.6100006/1‑94 (MQ=60)
                                                                                GGGTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATG             <  SRR4302543.2176053/94‑1 (MQ=60)
                                                                                GGCTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATG             <  SRR4302543.2176055/94‑1 (MQ=60)
                                                                                  CTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGA           <  SRR4302543.3287948/94‑1 (MQ=60)
                                                                                  CTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGA           <  SRR4302543.820456/94‑1 (MQ=60)
                                                                                  CTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGA           >  SRR4302543.2738943/1‑94 (MQ=60)
                                                                                  CTACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGA           <  SRR4302543.5147951/94‑1 (MQ=60)
                                                                                   TACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAA          <  SRR4302543.839441/94‑1 (MQ=60)
                                                                                   TACCGATAAAGGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAA          <  SRR4302543.3100955/94‑1 (MQ=60)
                                                                                    ACCGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAA         >  SRR4302543.1000011/1‑94 (MQ=60)
                                                                                     CCGATAAATGCGCCAGTGAACAGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAAT        <  SRR4302543.5886537/94‑1 (MQ=60)
                                                                                      CGATAAATGCGCCAGTGAACTTAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATC       <  SRR4302543.6628466/94‑1 (MQ=60)
                                                                                      CGATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATC       >  SRR4302543.7922507/1‑94 (MQ=60)
                                                                                       GATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCG      <  SRR4302543.2677053/94‑1 (MQ=60)
                                                                                        ATAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGC     >  SRR4302543.1328/1‑94 (MQ=60)
                                                                                         TAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCT    >  SRR4302543.7685149/1‑94 (MQ=60)
                                                                                         TAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCT    <  SRR4302543.4624854/94‑1 (MQ=60)
                                                                                         TAAATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCT    <  SRR4302543.6659178/94‑1 (MQ=60)
                                                                                           AATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGA  >  SRR4302543.4730452/1‑94 (MQ=60)
                                                                                           AATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGA  >  SRR4302543.7505838/1‑94 (MQ=60)
                                                                                           AATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGA  <  SRR4302543.7541843/94‑1 (MQ=60)
                                                                                           AATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGA  >  SRR4302543.214008/1‑94 (MQ=60)
                                                                                           AATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGA  >  SRR4302543.2042282/1‑94 (MQ=60)
                                                                                           AATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGA  >  SRR4302543.3818653/1‑94 (MQ=60)
                                                                                           AATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGA  >  SRR4302543.3556159/1‑94 (MQ=60)
                                                                                           AATGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATAGCTGA  <  SRR4302543.4498763/94‑1 (MQ=60)
                                                                                             |                                                                                           
CGTACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGA  >  NC_000913/3969727‑3969911

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑