Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,979,535 +G coding (1036/1386 nt) yifK → putative amino acid/amine transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,979,5341.G99.7% 1126.2 / ‑4.2 350coding (1035/1386 nt)yifKputative amino acid/amine transport protein
Reads supporting (aligned to +/- strand):  ref base . (0/1);  new base G (177/172);  total (177/173)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.60e-01

Only 100 of 376 total aligned reads displayed.

AAAAACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGCTCATGCCTGGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT  >  NC_000913/3979442‑3979622
                                                                                             |                                                                                        
aaaaaCCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAAtt                                                                                           >  1:1417210/1‑93 (MQ=255)
aaaaaCCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAAtt                                                                                           <  1:5510753/93‑1 (MQ=255)
 aaaaCCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTg                                                                                         >  1:6085489/1‑93 (MQ=255)
  aaaCCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTgg                                                                                        >  2:2874109/1‑92 (MQ=255)
  aaaCCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTgg                                                                                        <  1:5659829/93‑2 (MQ=255)
    aCCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTggct                                                                                      <  2:1868795/93‑4 (MQ=255)
    aCCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTggct                                                                                      <  1:1847329/93‑4 (MQ=255)
     ccGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTggctc                                                                                     <  1:933902/93‑5 (MQ=255)
     ccGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTggctc                                                                                     >  2:4072512/1‑89 (MQ=255)
       gTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCAt                                                                                    <  1:1031526/93‑1 (MQ=255)
       gTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCAt                                                                                    >  2:2081742/1‑93 (MQ=255)
        tCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATg                                                                                   <  2:1244619/93‑1 (MQ=255)
          aGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGTGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGcc                                                                                 <  1:6893066/93‑1 (MQ=255)
          aGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGcc                                                                                 <  2:6407155/93‑1 (MQ=255)
          aGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGcc                                                                                 >  1:3601052/1‑93 (MQ=255)
           gTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCt                                                                                <  2:4861527/93‑1 (MQ=255)
           gTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCt                                                                                >  2:2697449/1‑93 (MQ=255)
              aCCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTgaa                                                                             <  2:7606662/93‑3 (MQ=255)
               ccGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTgaac                                                                            <  1:6922337/93‑4 (MQ=255)
                  gcggcAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTAc                                                                        <  1:4635390/93‑1 (MQ=255)
                     gcAATGGCGAAAGTTTACCGTCACGGCGTACCGGTTGCGGGGGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTAcatg                                                                     >  2:7883954/1‑92 (MQ=255)
                      cAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTAcatca                                                                    >  1:2102207/1‑93 (MQ=255)
                        aTGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCAtt                                                                  >  2:7422993/1‑93 (MQ=255)
                        aTGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCAtt                                                                  >  2:2723630/1‑93 (MQ=255)
                         tGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTc                                                                 <  1:1539625/93‑1 (MQ=255)
                         tGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTc                                                                 >  2:1400187/1‑93 (MQ=255)
                         tGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTc                                                                 <  1:122744/93‑1 (MQ=255)
                            cGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCa                                                              >  1:6402015/1‑93 (MQ=255)
                              aaaGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAAt                                                            >  2:639626/1‑93 (MQ=255)
                              aaaGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAAt                                                            >  2:3024648/1‑93 (MQ=255)
                               aaGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATc                                                           <  1:7800564/93‑1 (MQ=255)
                               aaGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATc                                                           <  1:4250458/93‑1 (MQ=255)
                                   ttCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCa                                                       <  1:4568474/93‑1 (MQ=255)
                                    tCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAg                                                      <  2:2638222/93‑1 (MQ=255)
                                    tCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAg                                                      <  1:2313279/93‑1 (MQ=255)
                                    tCCCGTCACAGCGTACCGGTTGCGGGTGCGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAg                                                      >  2:5392072/1‑93 (MQ=255)
                                     cccGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGc                                                     >  1:3904847/1‑93 (MQ=255)
                                        gTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCgtg                                                  >  2:6043413/1‑93 (MQ=255)
                                        gTCACGGCGTACCGGTTGCGGGGGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCgtg                                                  >  1:6778411/1‑93 (MQ=255)
                                         tCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCgtgt                                                 >  1:1998496/1‑93 (MQ=255)
                                         tCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCgtgt                                                 <  1:591196/93‑1 (MQ=255)
                                            cGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGtt                                              <  2:6547937/93‑1 (MQ=255)
                                            cGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGtt                                              <  2:5252171/93‑1 (MQ=255)
                                             ggCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGttt                                             >  2:3604418/1‑93 (MQ=255)
                                             ggCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGttt                                             <  2:4156767/93‑1 (MQ=255)
                                                 tACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtct                                         >  2:3464939/1‑93 (MQ=255)
                                                 tACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtct                                         >  1:3701418/1‑93 (MQ=255)
                                                 tACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtct                                         >  1:4458836/1‑93 (MQ=255)
                                                 tACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtct                                         >  1:4901360/1‑93 (MQ=255)
                                                 tACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtct                                         >  2:3119267/1‑93 (MQ=255)
                                                  aCCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtcta                                        <  1:2674446/93‑1 (MQ=255)
                                                  aCCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtcta                                        <  1:2477952/93‑1 (MQ=255)
                                                  aCCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATCCCCAATCCGCAGCGTGTGTTTgtcta                                        <  1:4966213/93‑1 (MQ=255)
                                                   ccGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctac                                       >  2:4984838/1‑93 (MQ=255)
                                                   ccGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctac                                       <  2:5876492/93‑1 (MQ=255)
                                                   ccGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctac                                       >  1:6274847/1‑93 (MQ=255)
                                                    cGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctacg                                      >  2:2146006/1‑93 (MQ=255)
                                                     ggTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctacgt                                     >  2:5764836/1‑93 (MQ=255)
                                                          cGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACa                                >  2:4570985/1‑93 (MQ=255)
                                                          cGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACa                                <  1:1098144/93‑1 (MQ=255)
                                                          cGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACa                                <  1:5049714/93‑1 (MQ=255)
                                                          cGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACa                                <  1:2867605/93‑1 (MQ=255)
                                                           gggTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAg                               <  2:2487431/93‑1 (MQ=255)
                                                            ggTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGt                              >  2:1575834/1‑93 (MQ=255)
                                                            ggTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGt                              <  2:2289088/93‑1 (MQ=255)
                                                               gtgGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGcc                           <  2:7745265/93‑1 (MQ=255)
                                                                tgGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCa                          >  2:3769328/1‑93 (MQ=255)
                                                                tgGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCa                          <  1:1920293/93‑1 (MQ=255)
                                                                  gCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGc                        <  1:4064530/93‑1 (MQ=255)
                                                                  gCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCGACGTCTACAGTGCCAGc                        >  1:7042602/1‑93 (MQ=255)
                                                                    aGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGt                      >  2:1783837/1‑93 (MQ=255)
                                                                    aGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGt                      <  2:3356751/93‑1 (MQ=255)
                                                                    aGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGt                      >  1:3479138/1‑93 (MQ=255)
                                                                      tATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGc                    >  1:4334518/1‑93 (MQ=255)
                                                                       aTCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCt                   <  1:1636437/93‑1 (MQ=255)
                                                                        tCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCtt                  >  1:4701010/1‑93 (MQ=255)
                                                                         cTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTc                 <  1:1107852/93‑1 (MQ=255)
                                                                          tATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTcc                <  2:6815241/93‑1 (MQ=255)
                                                                          tATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTcc                <  1:1375707/93‑1 (MQ=255)
                                                                           aTTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCg               >  2:4376444/1‑93 (MQ=255)
                                                                            ttGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCgg              <  1:6908091/93‑1 (MQ=255)
                                                                             tGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCggg             <  2:7247267/93‑1 (MQ=255)
                                                                             tGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCggg             >  1:7698377/1‑93 (MQ=255)
                                                                             tGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCggg             <  2:104048/93‑1 (MQ=255)
                                                                              gCTAGTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCgggg            >  2:5044196/1‑93 (MQ=255)
                                                                               cTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGa           <  1:4814756/93‑1 (MQ=255)
                                                                               cTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGa           <  1:7400696/93‑1 (MQ=255)
                                                                               cTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGa           <  2:6886425/93‑1 (MQ=255)
                                                                                tATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAt          >  1:5996343/1‑93 (MQ=255)
                                                                                 aTTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATg         <  1:5737898/93‑1 (MQ=255)
                                                                                 aTTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATg         >  1:7609427/1‑93 (MQ=255)
                                                                                  ttCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATgg        <  1:6608818/93‑1 (MQ=255)
                                                                                   tCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGt       <  1:3281760/93‑1 (MQ=255)
                                                                                    cTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTg      >  2:5448439/1‑93 (MQ=255)
                                                                                     tGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGc     >  1:6120592/1‑93 (MQ=255)
                                                                                      gCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGcc    >  2:1930165/1‑93 (MQ=255)
                                                                                      gCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGcc    >  2:3992630/1‑93 (MQ=255)
                                                                                        tAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAt  >  1:437413/1‑93 (MQ=255)
                                                                                        tAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAt  <  1:5326302/93‑1 (MQ=255)
                                                                                        tAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAt  >  1:7912037/1‑93 (MQ=255)
                                                                                             |                                                                                        
AAAAACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGCTCATGCCTGGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT  >  NC_000913/3979442‑3979622

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 230 total aligned reads displayed.
AAAAACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGCTCATGCCTGGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGT  >  NC_000913/3979442‑3979629
                                                                                               |                                                                                               
AAAAACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTG                                                                                                 >  SRR4302543.6143164/1‑94 (MQ=60)
AAAAACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTG                                                                                                 <  SRR4302543.1117926/94‑1 (MQ=60)
AAAAACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTG                                                                                                 <  SRR4302543.3356725/94‑1 (MQ=60)
AAAAACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTG                                                                                                 <  SRR4302543.5560787/94‑1 (MQ=60)
  AAACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGgc                                                                                               <  SRR4302543.5711451/94‑3 (MQ=60)
   AACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGgct                                                                                              <  SRR4302543.4983578/94‑4 (MQ=60)
   AACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGgct                                                                                              <  SRR4302543.805596/94‑4 (MQ=60)
    ACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTC                                                                                             <  SRR4302543.1863944/94‑1 (MQ=60)
     CCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCA                                                                                            <  SRR4302543.5595577/94‑1 (MQ=60)
      CGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCAT                                                                                           <  SRR4302543.1083441/94‑1 (MQ=60)
      CGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCAT                                                                                           <  SRR4302543.1949408/94‑1 (MQ=60)
      CGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCAT                                                                                           <  SRR4302543.4844125/94‑1 (MQ=60)
       ttaatttgcgggggcaAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATG                                                                                          <  SRR4302543.6545060/78‑1 (MQ=60)
       GTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATG                                                                                          <  SRR4302543.2625610/94‑1 (MQ=60)
       GTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATG                                                                                          <  SRR4302543.1040684/94‑1 (MQ=60)
       GTCAGTTACCGGCGGCAATGGCGAAAGCTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATG                                                                                          >  SRR4302543.7641338/1‑94 (MQ=60)
        TCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGC                                                                                         <  SRR4302543.1945029/94‑1 (MQ=60)
        GCAGTTAGCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGC                                                                                         <  SRR4302543.6674808/94‑1 (MQ=60)
         CAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCC                                                                                        >  SRR4302543.3632830/1‑94 (MQ=60)
         CAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCC                                                                                        >  SRR4302543.4465768/1‑94 (MQ=60)
         AAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCC                                                                                        <  SRR4302543.3056718/94‑1 (MQ=60)
          AGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT                                                                                       <  SRR4302543.5483268/94‑1 (MQ=60)
          AGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT                                                                                       <  SRR4302543.4975340/94‑1 (MQ=60)
          AGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCT                                                                                       >  SRR4302543.7684728/1‑94 (MQ=60)
            TTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGA                                                                                     <  SRR4302543.2290702/94‑1 (MQ=60)
              ACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAAC                                                                                  >  SRR4302543.6978384/1‑94 (MQ=60)
              ACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAAC                                                                                  >  SRR4302543.1974733/1‑94 (MQ=60)
               CCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACT                                                                                 <  SRR4302543.6987428/94‑1 (MQ=60)
               CCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACT                                                                                 <  SRR4302543.4146565/94‑1 (MQ=60)
                  GCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACA                                                                              <  SRR4302543.6057591/94‑1 (MQ=60)
                  GCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACA                                                                              <  SRR4302543.4677536/94‑1 (MQ=60)
                   CGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTGGCGGGTGTGGCAGGATCTATTGCTATTCTGCTAATTGTCTCATGCCTGcactacag                                                                              >  SRR4302543.3359155/1‑86 (MQ=60)
                    GGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATC                                                                            <  SRR4302543.2200054/94‑1 (MQ=60)
                     GCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCA                                                                           >  SRR4302543.2121023/1‑94 (MQ=60)
                     GCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCA                                                                           <  SRR4302543.2073421/94‑1 (MQ=60)
                      CAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCAT                                                                          >  SRR4302543.1396498/1‑94 (MQ=60)
                      CAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCAT                                                                          >  SRR4302543.4698396/1‑94 (MQ=60)
                       AATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATT                                                                         >  SRR4302543.4405135/1‑94 (MQ=60)
                       AATGGCGAAAGTTTCCCGCCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATT                                                                         >  SRR4302543.1117647/1‑94 (MQ=60)
                        ATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTC                                                                        <  SRR4302543.4866949/94‑1 (MQ=60)
                        ATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTC                                                                        <  SRR4302543.2801255/94‑1 (MQ=60)
                        ATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTC                                                                        >  SRR4302543.1113230/1‑94 (MQ=60)
                         TGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCC                                                                       <  SRR4302543.123855/94‑1 (MQ=60)
                         TGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCC                                                                       <  SRR4302543.1553415/94‑1 (MQ=60)
                          GGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTGTCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCC                                                                      >  SRR4302543.42735/1‑94 (MQ=60)
                          GGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCC                                                                      <  SRR4302543.7131781/94‑1 (MQ=60)
                           GCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCA                                                                     >  SRR4302543.501629/1‑94 (MQ=60)
                           GCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCA                                                                     >  SRR4302543.6462288/1‑94 (MQ=60)
                            CGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAA                                                                    >  SRR4302543.7610124/1‑94 (MQ=60)
                              AAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATC                                                                  <  SRR4302543.1555732/94‑1 (MQ=60)
                               AAGTTTCCCGTCCCGGCGTACCGGTTGCGGTTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCC                                                                 <  SRR4302543.6612723/94‑1 (MQ=60)
                               AAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCC                                                                 <  SRR4302543.7874084/94‑1 (MQ=60)
                               AAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCC                                                                 <  SRR4302543.4289032/94‑1 (MQ=60)
                               AAGTGTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCC                                                                 <  SRR4302543.3933228/94‑1 (MQ=60)
                                 GTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGC                                                               >  SRR4302543.836502/1‑94 (MQ=60)
                                   TTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAG                                                             >  SRR4302543.2754787/1‑94 (MQ=60)
                                   TTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAG                                                             <  SRR4302543.5775956/94‑1 (MQ=60)
                                   TTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAG                                                             <  SRR4302543.4610026/94‑1 (MQ=60)
                                    TCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGC                                                            <  SRR4302543.2334320/94‑1 (MQ=60)
                                    TCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGC                                                            <  SRR4302543.4316929/94‑1 (MQ=60)
                                    TCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGC                                                            <  SRR4302543.5664267/94‑1 (MQ=60)
                                    TCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGC                                                            >  SRR4302543.3939319/1‑94 (MQ=60)
                                     CCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCG                                                           <  SRR4302543.6980649/94‑1 (MQ=60)
                                       CGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTG                                                         >  SRR4302543.6845315/1‑94 (MQ=60)
                                       CGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTG                                                         <  SRR4302543.6436996/94‑1 (MQ=60)
                                       CGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTG                                                         >  SRR4302543.3588363/1‑94 (MQ=60)
                                       CGTCACGGCGTACCGGTTGCGGGGGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTG                                                         >  SRR4302543.6842431/1‑94 (MQ=60)
                                        GTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGT                                                        >  SRR4302543.2016430/1‑94 (MQ=60)
                                        GTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGT                                                        >  SRR4302543.6108514/1‑94 (MQ=60)
                                         TCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTG                                                       <  SRR4302543.7982791/94‑1 (MQ=60)
                                         TCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTG                                                       <  SRR4302543.1553107/94‑1 (MQ=60)
                                         TCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTG                                                       <  SRR4302543.596625/94‑1 (MQ=60)
                                          CACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGT                                                      >  SRR4302543.613100/1‑94 (MQ=60)
                                          CACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGT                                                      <  SRR4302543.1976414/94‑1 (MQ=60)
                                            CGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTT                                                    >  SRR4302543.5741779/1‑94 (MQ=60)
                                             GGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTG                                                   <  SRR4302543.4713343/94‑1 (MQ=60)
                                             GGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTG                                                   <  SRR4302543.7061201/94‑1 (MQ=60)
                                             GGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTG                                                   <  SRR4302543.6306175/94‑1 (MQ=60)
                                             GGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTG                                                   >  SRR4302543.7187225/1‑94 (MQ=60)
                                             GGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTG                                                   <  SRR4302543.615529/94‑1 (MQ=60)
                                               CGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTC                                                 >  SRR4302543.4946443/1‑94 (MQ=60)
                                               CGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCACATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTC                                                 <  SRR4302543.1758326/94‑1 (MQ=60)
                                                GTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCT                                                <  SRR4302543.1003958/94‑1 (MQ=60)
                                                GTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCT                                                >  SRR4302543.6540234/1‑94 (MQ=60)
                                                GTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCT                                                >  SRR4302543.4499238/1‑94 (MQ=60)
                                                GTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCT                                                >  SRR4302543.4946038/1‑94 (MQ=60)
                                                GTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCT                                                >  SRR4302543.3733956/1‑94 (MQ=60)
                                                 TACCGGTTGCGGGTGTGGCAGTATATATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTA                                               <  SRR4302543.4945501/94‑1 (MQ=60)
                                                  ACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTAC                                              <  SRR4302543.2500364/94‑1 (MQ=60)
                                                  ACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTAC                                              <  SRR4302543.2698693/94‑1 (MQ=60)
                                                  ACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTAC                                              <  SRR4302543.5866820/94‑1 (MQ=60)
                                                  ACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTAC                                              >  SRR4302543.6624364/1‑94 (MQ=60)
                                                  ACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTAC                                              >  SRR4302543.6334008/1‑94 (MQ=60)
                                                  ACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATCCCCAATCCGCAGCGTGTGTTTGTCTAC                                              <  SRR4302543.5011419/94‑1 (MQ=60)
                                                   CCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACG                                             <  SRR4302543.4381014/94‑1 (MQ=60)
                                                     GGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTC                                           >  SRR4302543.6980205/1‑94 (MQ=60)
                                                     GGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTC                                           >  SRR4302543.474107/1‑94 (MQ=60)
                                                         GCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACA                                       <  SRR4302543.4525518/94‑1 (MQ=60)
                                                          CGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAG                                      <  SRR4302543.1108030/94‑1 (MQ=60)
                                                          CGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAG                                      <  SRR4302543.2893734/94‑1 (MQ=60)
                                                          CGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAG                                      <  SRR4302543.5095628/94‑1 (MQ=60)
                                                          CGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAG                                      <  SRR4302543.1108029/94‑1 (MQ=60)
                                                          CGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAG                                      >  SRR4302543.6159270/1‑94 (MQ=60)
                                                          CGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAG                                      <  SRR4302543.6971289/94‑1 (MQ=60)
                                                           GGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGT                                     <  SRR4302543.5204975/94‑1 (MQ=60)
                                                            GGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTG                                    >  SRR4302543.6998144/1‑94 (MQ=60)
                                                            GGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTG                                    >  SRR4302543.6028283/1‑94 (MQ=60)
                                                            GGTGTGGCAGTATCTATAGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTG                                    <  SRR4302543.4416502/94‑1 (MQ=60)
                                                              TGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCC                                  >  SRR4302543.1883764/1‑94 (MQ=60)
                                                              TGTGGCAGTATCTATAGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTGCCAATCCGCAGCGTGTGTTTGTATACGTCTACAGTGCC                                  >  SRR4302543.1883763/1‑94 (MQ=60)
                                                                TGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAG                                <  SRR4302543.2762455/94‑1 (MQ=60)
                                                                TGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAG                                <  SRR4302543.1937601/94‑1 (MQ=60)
                                                                 GGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCGACGTCTACAGTGCCAGC                               >  SRR4302543.7110671/1‑94 (MQ=60)
                                                                  GCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCG                              >  SRR4302543.4786094/1‑94 (MQ=60)
                                                                  GCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCG                              <  SRR4302543.4100928/94‑1 (MQ=60)
                                                                   CAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGT                             >  SRR4302543.6927959/1‑94 (MQ=60)
                                                                   CAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGT                             >  SRR4302543.3510301/1‑94 (MQ=60)
                                                                   CAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGT                             <  SRR4302543.3110145/94‑1 (MQ=60)
                                                                   CAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGT                             <  SRR4302543.5944679/94‑1 (MQ=60)
                                                                    AGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTG                            >  SRR4302543.5054072/1‑94 (MQ=60)
                                                                    AGTATCTACTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTG                            >  SRR4302543.5530967/1‑94 (MQ=60)
                                                                     GTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGC                           >  SRR4302543.5647945/1‑94 (MQ=60)
                                                                     GTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGC                           >  SRR4302543.142149/1‑94 (MQ=60)
                                                                     GTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGC                           >  SRR4302543.4373837/1‑94 (MQ=60)
                                                                     GTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGC                           >  SRR4302543.684824/1‑94 (MQ=60)
                                                                     GTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGC                           >  SRR4302543.375220/1‑94 (MQ=60)
                                                                     GTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGC                           >  SRR4302543.5076902/1‑94 (MQ=60)
                                                                       ATCTATTGCTATTCTGCTAATTGGCTCATGCCTGCAATACATCATTCCCAATCCGCCGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTT                         >  SRR4302543.4070427/1‑94 (MQ=60)
                                                                       ATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTT                         >  SRR4302543.6197753/1‑94 (MQ=60)
                                                                       ATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTT                         >  SRR4302543.4743945/1‑94 (MQ=60)
                                                                         CTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCC                       <  SRR4302543.7785863/94‑1 (MQ=60)
                                                                         CTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCC                       >  SRR4302543.1742109/1‑94 (MQ=60)
                                                                         CTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCC                       <  SRR4302543.1613192/94‑1 (MQ=60)
                                                                         CTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCC                       <  SRR4302543.1117851/94‑1 (MQ=60)
                                                                         CTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCC                       >  SRR4302543.4641752/1‑94 (MQ=60)
                                                                          TATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCG                      <  SRR4302543.1171555/94‑1 (MQ=60)
                                                                          TATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCG                      >  SRR4302543.1220078/1‑94 (MQ=60)
                                                                          TATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCG                      <  SRR4302543.1388067/94‑1 (MQ=60)
                                                                          TATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCG                      <  SRR4302543.1717410/94‑1 (MQ=60)
                                                                          TATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCG                      <  SRR4302543.4645416/94‑1 (MQ=60)
                                                                          TATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCG                      >  SRR4302543.4753058/1‑94 (MQ=60)
                                                                          TATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCG                      >  SRR4302543.1102264/1‑94 (MQ=60)
                                                                           ATTGCTATTCTGCTAAATGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGCGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGG                     <  SRR4302543.4324173/94‑1 (MQ=60)
                                                                           ATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGG                     >  SRR4302543.780552/1‑94 (MQ=60)
                                                                           ATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGG                     <  SRR4302543.6229723/94‑1 (MQ=60)
                                                                            TTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGG                    <  SRR4302543.4582106/94‑1 (MQ=60)
                                                                            TTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGG                    >  SRR4302543.7771243/1‑94 (MQ=60)
                                                                            TTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGG                    <  SRR4302543.6973013/94‑1 (MQ=60)
                                                                            TTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGG                    <  SRR4302543.6973012/94‑1 (MQ=60)
                                                                            TTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGG                    >  SRR4302543.6050803/1‑94 (MQ=60)
                                                                            TTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGG                    >  SRR4302543.7771416/1‑94 (MQ=60)
                                                                             TGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGG                   >  SRR4302543.363330/1‑94 (MQ=60)
                                                                             TGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGG                   <  SRR4302543.2314917/94‑1 (MQ=60)
                                                                             TGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTAAGTCTACAGTGCCAGCGTGCTTCCGGGG                   <  SRR4302543.7917538/94‑1 (MQ=60)
                                                                               CTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAT                 <  SRR4302543.7471743/94‑1 (MQ=60)
                                                                               CTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAT                 >  SRR4302543.1006176/1‑94 (MQ=60)
                                                                               CTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAT                 <  SRR4302543.4858723/94‑1 (MQ=60)
                                                                               CTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAT                 >  SRR4302543.125474/1‑94 (MQ=60)
                                                                               CTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAT                 >  SRR4302543.6051324/1‑94 (MQ=60)
                                                                               CTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAT                 <  SRR4302543.5769413/94‑1 (MQ=60)
                                                                                TATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATG                <  SRR4302543.4368016/94‑1 (MQ=60)
                                                                                TATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATG                >  SRR4302543.7681674/1‑94 (MQ=60)
                                                                                TATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATG                >  SRR4302543.1322008/1‑94 (MQ=60)
                                                                                TATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATG                >  SRR4302543.6800041/1‑94 (MQ=60)
                                                                                TATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGGGCCAGCGTGCTTCCGGGGATG                >  SRR4302543.1593116/1‑94 (MQ=60)
                                                                                 ATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGG               <  SRR4302543.5790223/94‑1 (MQ=60)
                                                                                 ATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGG               >  SRR4302543.2661828/1‑94 (MQ=60)
                                                                                 ATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGG               >  SRR4302543.3644006/1‑94 (MQ=60)
                                                                                 ATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGG               >  SRR4302543.3720818/1‑94 (MQ=60)
                                                                                  TTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGT              <  SRR4302543.6671104/94‑1 (MQ=60)
                                                                                   TCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTG             >  SRR4302543.928313/1‑94 (MQ=60)
                                                                                   TCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTG             <  SRR4302543.3311386/94‑1 (MQ=60)
                                                                                   TCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTG             <  SRR4302543.3311385/94‑1 (MQ=60)
                                                                                    CTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGC            >  SRR4302543.6178561/1‑94 (MQ=60)
                                                                                    CTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGC            >  SRR4302543.367548/1‑94 (MQ=60)
                                                                                    CTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGC            <  SRR4302543.745615/94‑1 (MQ=60)
                                                                                     TGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCC           >  SRR4302543.4041468/1‑94 (MQ=60)
                                                                                       CTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT         >  SRR4302543.2547202/1‑94 (MQ=60)
                                                                                       CTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT         >  SRR4302543.7986369/1‑94 (MQ=60)
                                                                                       CTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT         >  SRR4302543.244272/1‑94 (MQ=60)
                                                                                       CTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT         >  SRR4302543.5307074/1‑94 (MQ=60)
                                                                                       CTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT         >  SRR4302543.7588657/1‑94 (MQ=60)
                                                                                       CTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT         >  SRR4302543.441511/1‑94 (MQ=60)
                                                                                       CTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCAT         >  SRR4302543.4498671/1‑94 (MQ=60)
                                                                                       CTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGGGCCAT         >  SRR4302543.1549972/1‑94 (MQ=60)
                                                                                        TAATTGGCTCATGCCTGAGCTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATG        >  SRR4302543.4611589/1‑94 (MQ=60)
                                                                                        TAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATG        >  SRR4302543.4594320/1‑94 (MQ=60)
                                                                                        TAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATG        <  SRR4302543.2074578/94‑1 (MQ=60)
                                                                                        TAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATG        <  SRR4302543.5374466/94‑1 (MQ=60)
                                                                                          AATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGG       >  SRR4302543.6443072/1‑94 (MQ=60)
                                                                                          AATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGG       >  SRR4302543.737588/1‑94 (MQ=60)
                                                                                          AATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGG       <  SRR4302543.6158794/94‑1 (MQ=60)
                                                                                           ATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGT      >  SRR4302543.7989660/1‑94 (MQ=60)
                                                                                            ttgGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTTCTTCCGGGGATGGTGCCATGGTT     <  SRR4302543.265826/91‑1 (MQ=60)
                                                                                            TGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTT    >  SRR4302543.1545645/1‑94 (MQ=60)
                                                                                            TGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTT    <  SRR4302543.1297474/94‑1 (MQ=60)
                                                                                             GGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTG   <  SRR4302543.7815805/94‑1 (MQ=60)
                                                                                             GGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTG   >  SRR4302543.680067/1‑94 (MQ=60)
                                                                                               GCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGT  <  SRR4302543.1781425/94‑1 (MQ=60)
                                                                                               GCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGT  <  SRR4302543.276166/94‑1 (MQ=60)
                                                                                               |                                                                                               
AAAAACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGCTCATGCCTGGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGT  >  NC_000913/3979442‑3979629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: