Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,989,898 A→G Q378R (CAG→CGG)  cyaA → adenylate cyclase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,989,8980AG100.0% 1241.0 / NA 393Q378R (CAG→CGG) cyaAadenylate cyclase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (179/214);  total (179/214)

Only 100 of 407 total aligned reads displayed.

GCGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCAGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCG  >  NC_000913/3989808‑3989987
                                                                                          |                                                                                         
 cgcAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGt                                                                                        <  2:1274200/93‑1 (MQ=255)
  gcAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGTTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTg                                                                                       >  1:4780201/1‑93 (MQ=255)
   cAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGc                                                                                      <  1:5801767/93‑1 (MQ=255)
   cAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGc                                                                                      >  2:3053822/1‑93 (MQ=255)
     gtgtTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGTTCGTCTGGCAATGCTCGATAACCGCGCTNANTGGAAGATTGATCGGGTGCGt                                                                                    >  1:4038772/1‑93 (MQ=255)
     gtgtTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGt                                                                                    >  2:7562214/1‑93 (MQ=255)
      tgtTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTg                                                                                   >  1:5460707/1‑93 (MQ=255)
      tgtTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTg                                                                                   >  2:5227998/1‑93 (MQ=255)
       gtTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGa                                                                                  <  1:2052876/93‑1 (MQ=255)
       gtTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGa                                                                                  <  2:1078977/93‑1 (MQ=255)
       gtTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGa                                                                                  <  2:852616/93‑1 (MQ=255)
        ttGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAg                                                                                 <  2:410470/93‑1 (MQ=255)
        ttGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAg                                                                                 <  2:3393222/93‑1 (MQ=255)
                gTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACaa                                                                         <  2:1439412/93‑1 (MQ=255)
                gTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGGGCGTGAGGCGcacac                                                                         >  1:1881588/1‑92 (MQ=255)
                 ttAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAAc                                                                        >  1:7219227/1‑93 (MQ=255)
                 ttAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCAGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAAc                                                                        >  2:4955020/1‑93 (MQ=255)
                    gTGAGCGAGGGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAg                                                                     <  2:5895015/93‑1 (MQ=255)
                      gAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTCCGTGAGGCGCACAACGAGtt                                                                   <  1:1424409/93‑1 (MQ=255)
                          gAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTc                                                               >  2:6281329/1‑93 (MQ=255)
                            gTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGa                                                             >  2:2829363/1‑93 (MQ=255)
                            gTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGa                                                             >  1:6112419/1‑93 (MQ=255)
                             tGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGAc                                                            >  2:4942740/1‑93 (MQ=255)
                             tGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGAc                                                            <  1:7828449/93‑1 (MQ=255)
                             tGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGAc                                                            >  2:6617519/1‑93 (MQ=255)
                             tGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGAc                                                            <  2:7175328/93‑1 (MQ=255)
                              ggggTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGAcg                                                           >  1:3350208/1‑93 (MQ=255)
                               gggTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGAcgc                                                          >  1:3889271/1‑93 (MQ=255)
                               gggTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGAcgc                                                          <  2:4353101/93‑1 (MQ=255)
                                ggTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGAcgcg                                                         >  1:914343/1‑93 (MQ=255)
                                ggTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGAcgcg                                                         >  2:878579/1‑93 (MQ=255)
                                  ttGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCgat                                                       <  1:6466027/93‑1 (MQ=255)
                                  ttGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCgat                                                       <  2:4652450/93‑1 (MQ=255)
                                  ttGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCgat                                                       >  2:3974170/1‑93 (MQ=255)
                                    gggACGAAGTTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGCTTGATCGGGTGCGTGAGGCGCACAACGAGGTGCTCGACGCgaggg                                                     >  2:563271/1‑90 (MQ=255)
                                    gggACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCgatga                                                     <  2:1587710/93‑1 (MQ=255)
                                     ggACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCgatgat                                                    <  1:4436909/93‑1 (MQ=255)
                                     ggACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCgatgat                                                    >  1:4529427/1‑93 (MQ=255)
                                       aCGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGc                                                  <  1:1057869/93‑1 (MQ=255)
                                        cGAAGTTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCa                                                 <  1:791104/93‑1 (MQ=255)
                                        cGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCa                                                 <  2:6917114/93‑1 (MQ=255)
                                        cGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCa                                                 <  1:6364358/93‑1 (MQ=255)
                                        cGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCa                                                 <  2:3864916/93‑1 (MQ=255)
                                          aaGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCGCAACGAGTTGCTCGACGCGATGATGCaga                                               <  1:94808/93‑1 (MQ=255)
                                           aGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCagag                                              >  2:2304577/1‑93 (MQ=255)
                                            gCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGc                                             <  1:3568037/93‑1 (MQ=255)
                                              tCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTa                                           >  1:2618084/1‑93 (MQ=255)
                                              tCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTa                                           <  1:7338282/93‑1 (MQ=255)
                                               cGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTAc                                          >  1:7635912/1‑93 (MQ=255)
                                               cGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTAc                                          >  1:674594/1‑93 (MQ=255)
                                                 tCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGa                                                                                  >  1:3067767/1‑51 (MQ=255)
                                                     gCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAAt                                    >  2:6084696/1‑93 (MQ=255)
                                                      cAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATc                                   <  2:1395104/93‑1 (MQ=255)
                                                       aaTGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCt                                  >  1:7484352/1‑93 (MQ=255)
                                                       aaTGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCt                                  >  2:5760273/1‑93 (MQ=255)
                                                        aTGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTg                                 >  2:6377626/1‑93 (MQ=255)
                                                         tGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCCCAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGa                                >  1:2521416/1‑93 (MQ=255)
                                                         tGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGa                                >  1:5716943/1‑93 (MQ=255)
                                                         tGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGa                                >  2:7659924/1‑93 (MQ=255)
                                                         tGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGa                                <  2:6155368/93‑1 (MQ=255)
                                                          gCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGAt                               <  2:3528971/93‑1 (MQ=255)
                                                           gtCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATc                              <  1:6668234/92‑1 (MQ=255)
                                                           cTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATc                              <  1:6866520/93‑1 (MQ=255)
                                                           cTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATc                              <  1:2871686/93‑1 (MQ=255)
                                                            tCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATcc                             <  1:4909124/93‑1 (MQ=255)
                                                            tCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATcc                             <  1:6936985/93‑1 (MQ=255)
                                                              gATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTCCCGTAATCTGATCCGc                           >  1:6022131/1‑93 (MQ=255)
                                                                tAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCtt                         >  2:5034086/1‑93 (MQ=255)
                                                                tAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCtt                         <  1:6586509/93‑1 (MQ=255)
                                                                tAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCtt                         <  1:7730547/93‑1 (MQ=255)
                                                                tAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCGCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCtt                         <  2:5488883/93‑1 (MQ=255)
                                                                   ccGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTgc                      <  2:480376/93‑1 (MQ=255)
                                                                    cgcgCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCACAGCTACCGTAATCTGATCCGCTTTgcg                     <  2:1763014/93‑1 (MQ=255)
                                                                     gcgcTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTgcgc                    <  2:7361755/93‑1 (MQ=255)
                                                                       gcTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGt                  <  1:1800221/93‑1 (MQ=255)
                                                                       gcTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGt                  >  2:2913558/1‑93 (MQ=255)
                                                                       gcTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGt                  <  2:7925938/93‑1 (MQ=255)
                                                                       gcTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGt                  >  2:2489504/1‑93 (MQ=255)
                                                                        cTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTc                 <  2:2106320/93‑1 (MQ=255)
                                                                          aaCTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGc               >  1:1475909/1‑93 (MQ=255)
                                                                          aaCTGGAAGATTGATCGGGTGCGGGAGCCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGc               <  1:582397/93‑1 (MQ=255)
                                                                            cTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCaa             >  1:3205194/1‑93 (MQ=255)
                                                                             tGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAAt            <  1:2997064/93‑1 (MQ=255)
                                                                             tGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAAt            <  2:2019605/93‑1 (MQ=255)
                                                                             tGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAAt            >  2:3187430/1‑93 (MQ=255)
                                                                               gAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATaa          <  2:3605540/93‑1 (MQ=255)
                                                                                aaGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAAc         <  1:2232274/93‑1 (MQ=255)
                                                                                 aGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAAcc        <  2:5675334/93‑1 (MQ=255)
                                                                                 aGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAAcc        <  1:1690578/93‑1 (MQ=255)
                                                                                 aGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAAcc        <  1:2360295/93‑1 (MQ=255)
                                                                                 aGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAAcc        <  1:5281288/93‑1 (MQ=255)
                                                                                 aGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAAcc        <  1:4592599/93‑1 (MQ=255)
                                                                                   aTTGATCGGATGCGTGAGGCGCACAACGAGATGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGATTTGCGCGTCGCAATAACCtt      >  1:5926488/1‑93 (MQ=255)
                                                                                     tGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAg    <  2:7056869/93‑1 (MQ=255)
                                                                                     tGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAg    >  2:4287837/1‑93 (MQ=255)
                                                                                     tGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAg    <  1:348525/93‑1 (MQ=255)
                                                                                     tGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAg    <  1:3652058/93‑1 (MQ=255)
                                                                                     tGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAg    <  2:2735187/93‑1 (MQ=255)
                                                                                     tGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAg    <  2:2403071/93‑1 (MQ=255)
                                                                                      gATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGc   >  1:470530/1‑93 (MQ=255)
                                                                                          |                                                                                         
GCGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCAGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCG  >  NC_000913/3989808‑3989987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 221 total aligned reads displayed.
GTCGCGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCAGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCGTCTC  >  NC_000913/3989805‑3989991
                                                                                             |                                                                                             
GTCGCGCAGTGTTGAGCCAGTTAGTGAGCGAGGGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCG                                                                                               >  SRR4302543.4586641/1‑94 (MQ=60)
 TCGCGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGG                                                                                              <  SRR4302543.3494651/94‑1 (MQ=60)
  CGCGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGG                                                                                             <  SRR4302543.4909047/94‑1 (MQ=60)
  CGCGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGG                                                                                             >  SRR4302543.2255829/1‑94 (MQ=60)
  CGCGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGG                                                                                             >  SRR4302543.3263221/1‑94 (MQ=60)
   GCGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGT                                                                                            <  SRR4302543.6646556/94‑1 (MQ=60)
    CGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGTTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTG                                                                                           >  SRR4302543.4823889/1‑94 (MQ=60)
    CGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTG                                                                                           >  SRR4302543.2070544/1‑94 (MQ=60)
     GCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGC                                                                                          <  SRR4302543.1853878/94‑1 (MQ=60)
     GCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGC                                                                                          >  SRR4302543.1815216/1‑94 (MQ=60)
      CAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCG                                                                                         >  SRR4302543.5996101/1‑94 (MQ=60)
      CAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCG                                                                                         <  SRR4302543.5854535/94‑1 (MQ=60)
       AGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGTTCGTCTGGCAATGCTCGATAACCGCGCTNANTGGAAGATTGATCGGGTGCGT                                                                                        >  SRR4302543.4074916/1‑94 (MQ=60)
       AGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGTTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGG                                                                                        >  SRR4302543.5872243/1‑94 (MQ=60)
       AGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGT                                                                                        <  SRR4302543.7816011/94‑1 (MQ=60)
        GTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTG                                                                                       >  SRR4302543.7740591/1‑94 (MQ=60)
        GTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTG                                                                                       <  SRR4302543.5747167/94‑1 (MQ=60)
        GTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTG                                                                                       >  SRR4302543.5510199/1‑94 (MQ=60)
        GTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTG                                                                                       >  SRR4302543.3340406/1‑94 (MQ=60)
        GTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTG                                                                                       >  SRR4302543.2208014/1‑94 (MQ=60)
         TGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGA                                                                                      <  SRR4302543.7449759/94‑1 (MQ=60)
          GTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAG                                                                                     <  SRR4302543.359243/94‑1 (MQ=60)
          GTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAG                                                                                     <  SRR4302543.2071251/94‑1 (MQ=60)
            TGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGC                                                                                   <  SRR4302543.2607020/94‑1 (MQ=60)
              AGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGC                                                                                 <  SRR4302543.7770416/94‑1 (MQ=60)
                 CAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACA                                                                              >  SRR4302543.3408286/1‑94 (MQ=60)
                  AGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAA                                                                             >  SRR4302543.4521504/1‑94 (MQ=60)
                  AGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAA                                                                             <  SRR4302543.385798/94‑1 (MQ=60)
                  AGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGGGCGTGAGGCGCACAC                                                                             >  SRR4302543.1898495/1‑94 (MQ=60)
                   GTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAAC                                                                            <  SRR4302543.5984217/94‑1 (MQ=60)
                   GTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAAC                                                                            >  SRR4302543.7289199/1‑94 (MQ=60)
                   GTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAAC                                                                            >  SRR4302543.1549245/1‑94 (MQ=60)
                    TTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACG                                                                           <  SRR4302543.6979374/94‑1 (MQ=60)
                      AGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAG                                                                         >  SRR4302543.4760113/1‑94 (MQ=60)
                      AGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAG                                                                         <  SRR4302543.6968717/94‑1 (MQ=60)
                      AGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAG                                                                         <  SRR4302543.4765512/94‑1 (MQ=60)
                      AGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAG                                                                         <  SRR4302543.4773555/94‑1 (MQ=60)
                         GAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTG                                                                      <  SRR4302543.4233845/94‑1 (MQ=60)
                         GAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTCCGTGAGGCGCACAACGAGTTG                                                                      <  SRR4302543.1437300/94‑1 (MQ=60)
                            GGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTC                                                                   <  SRR4302543.4829881/94‑1 (MQ=60)
                            CGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTC                                                                   <  SRR4302543.6621025/94‑1 (MQ=60)
                            CGAGGGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGAGCGGGTGCGTGAGGCGCACAACGAGTTGCTC                                                                   <  SRR4302543.6801403/94‑1 (MQ=60)
                             GAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCTGGCGCGTGAGGCGCACAACGAGTTGCTCG                                                                  >  SRR4302543.5435449/1‑94 (MQ=60)
                             GAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCG                                                                  <  SRR4302543.5275583/94‑1 (MQ=60)
                             GAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCG                                                                  <  SRR4302543.2735586/94‑1 (MQ=60)
                              AGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGA                                                                 >  SRR4302543.6170324/1‑94 (MQ=60)
                              AGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGA                                                                 >  SRR4302543.7978749/1‑94 (MQ=60)
                                TGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACG                                                               >  SRR4302543.3380372/1‑94 (MQ=60)
                                TGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACG                                                               <  SRR4302543.1957434/94‑1 (MQ=60)
                                TGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACG                                                               <  SRR4302543.7902172/94‑1 (MQ=60)
                                 GGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGC                                                              >  SRR4302543.3923608/1‑94 (MQ=60)
                                 GGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGC                                                              >  SRR4302543.2610688/1‑94 (MQ=60)
                                 GGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGC                                                              >  SRR4302543.3626164/1‑94 (MQ=60)
                                  GGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATCACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCG                                                             >  SRR4302543.922367/1‑94 (MQ=60)
                                  GGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCG                                                             >  SRR4302543.922366/1‑94 (MQ=60)
                                  GGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCG                                                             >  SRR4302543.5938578/1‑94 (MQ=60)
                                   GGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGA                                                            >  SRR4302543.821736/1‑94 (MQ=60)
                                    GTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGAG                                                           >  SRR4302543.4679868/1‑94 (MQ=60)
                                     TTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATG                                                          <  SRR4302543.5916121/94‑1 (MQ=60)
                                     TTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATG                                                          <  SRR4302543.6526948/94‑1 (MQ=60)
                                     TTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATG                                                          <  SRR4302543.7512526/94‑1 (MQ=60)
                                       GGGACGAATCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGAT                                                        <  SRR4302543.2378867/94‑1 (MQ=60)
                                       GGGACGAAGTTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGAT                                                        <  SRR4302543.7766966/94‑1 (MQ=60)
                                       GGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGAT                                                        >  SRR4302543.4570648/1‑94 (MQ=60)
                                       GGCACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGAT                                                        <  SRR4302543.2991157/94‑1 (MQ=60)
                                        GGACGAAGTTCTTCTGGCAATGCTCGATAACCGCGCTAACTGGAATATTGATCGGGTGCGTAAGGCGCACAACGAGTTGCTCGACGCGATGATG                                                       <  SRR4302543.3126201/94‑1 (MQ=60)
                                        GGACGAAGTTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATG                                                       <  SRR4302543.5786601/94‑1 (MQ=60)
                                        GGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATG                                                       <  SRR4302543.4477095/94‑1 (MQ=60)
                                        GGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATG                                                       >  SRR4302543.460576/1‑94 (MQ=60)
                                          ACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCA                                                     <  SRR4302543.1067356/94‑1 (MQ=60)
                                           CGAAGTTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAG                                                    <  SRR4302543.798056/94‑1 (MQ=60)
                                           CGAAGTTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAG                                                    >  SRR4302543.337435/1‑94 (MQ=60)
                                           CGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAG                                                    >  SRR4302543.938549/1‑94 (MQ=60)
                                           CGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAG                                                    <  SRR4302543.2949135/94‑1 (MQ=60)
                                           CGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAG                                                    <  SRR4302543.6389291/94‑1 (MQ=60)
                                           CGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAG                                                    <  SRR4302543.6424206/94‑1 (MQ=60)
                                            GAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGA                                                   >  SRR4302543.5468135/1‑94 (MQ=60)
                                            GAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGA                                                   >  SRR4302543.1600544/1‑94 (MQ=60)
                                             AAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAG                                                  <  SRR4302543.5201744/94‑1 (MQ=60)
                                             AAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAG                                                  <  SRR4302543.3494046/94‑1 (MQ=60)
                                             AAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAG                                                  <  SRR4302543.6826239/94‑1 (MQ=60)
                                              AGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGC                                                 >  SRR4302543.7687016/1‑94 (MQ=60)
                                              AGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGC                                                 >  SRR4302543.2087963/1‑94 (MQ=60)
                                               GCTCGTCTGGCAATGCTCGGTAACCGCGCTAACTGGAAGATTGATCCGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCT                                                <  SRR4302543.2169188/94‑1 (MQ=60)
                                               GCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCT                                                <  SRR4302543.3599593/94‑1 (MQ=60)
                                               GCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCT                                                <  SRR4302543.3599592/94‑1 (MQ=60)
                                                CTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTA                                               >  SRR4302543.5984833/1‑94 (MQ=60)
                                                CTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTA                                               >  SRR4302543.2641819/1‑94 (MQ=60)
                                                 TCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTAC                                              >  SRR4302543.680800/1‑94 (MQ=60)
                                                 TCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTAC                                              >  SRR4302543.7708358/1‑94 (MQ=60)
                                                 TCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTAC                                              <  SRR4302543.4904986/94‑1 (MQ=60)
                                                 TCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTAC                                              <  SRR4302543.7408876/94‑1 (MQ=60)
                                                 TCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTAC                                              >  SRR4302543.680798/1‑94 (MQ=60)
                                                  CGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACC                                             >  SRR4302543.1217871/1‑94 (MQ=60)
                                                  CGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACC                                             <  SRR4302543.895277/94‑1 (MQ=60)
                                                  CGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACC                                             <  SRR4302543.5689795/94‑1 (MQ=60)
                                                   GTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGagagtggagatcggaagagcggttcagcaggaatgccgaga                                            >  SRR4302543.3095358/1‑53 (MQ=60)
                                                   GTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGagagtggagatcggaagagcggttcagcaggaatgccgaga                                            >  SRR4302543.1400506/1‑53 (MQ=60)
                                                   GTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCG                                            >  SRR4302543.6686664/1‑94 (MQ=60)
                                                   GTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCG                                            >  SRR4302543.4490008/1‑94 (MQ=60)
                                                    TCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGT                                           <  SRR4302543.7431506/94‑1 (MQ=60)
                                                      TGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAA                                         <  SRR4302543.7807942/94‑1 (MQ=60)
                                                      TGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAA                                         >  SRR4302543.623857/1‑94 (MQ=60)
                                                       GGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAAT                                        >  SRR4302543.6715436/1‑94 (MQ=60)
                                                       GGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAAT                                        >  SRR4302543.4695239/1‑94 (MQ=60)
                                                       GGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAAT                                        >  SRR4302543.2454882/1‑94 (MQ=60)
                                                        GCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATC                                       >  SRR4302543.223297/1‑94 (MQ=60)
                                                        GCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATC                                       <  SRR4302543.1815076/94‑1 (MQ=60)
                                                         CAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCT                                      >  SRR4302543.5866463/1‑94 (MQ=60)
                                                         CAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCT                                      >  SRR4302543.6473306/1‑94 (MQ=60)
                                                         CAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCT                                      <  SRR4302543.5848764/94‑1 (MQ=60)
                                                         CAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCT                                      <  SRR4302543.24134/94‑1 (MQ=60)
                                                         CAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCT                                      >  SRR4302543.7555977/1‑94 (MQ=60)
                                                         CAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCT                                      >  SRR4302543.361197/1‑94 (MQ=60)
                                                         CAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCT                                      >  SRR4302543.811560/1‑94 (MQ=60)
                                                         CAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCT                                      >  SRR4302543.6837724/1‑94 (MQ=60)
                                                         CAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCT                                      >  SRR4302543.3010404/1‑94 (MQ=60)
                                                         CAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCT                                      <  SRR4302543.1403689/94‑1 (MQ=60)
                                                         CAATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCT                                      <  SRR4302543.3321946/94‑1 (MQ=60)
                                                          AATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGATGCGATGATGCAGAGCTACCGTAATCTG                                     >  SRR4302543.7289754/1‑94 (MQ=60)
                                                          AATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTG                                     <  SRR4302543.3803694/94‑1 (MQ=60)
                                                          AATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTG                                     >  SRR4302543.4570548/1‑94 (MQ=60)
                                                          AATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTG                                     >  SRR4302543.6399409/1‑94 (MQ=60)
                                                           ATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCCCAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGA                                    >  SRR4302543.2544336/1‑94 (MQ=60)
                                                           ATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGA                                    >  SRR4302543.5769109/1‑94 (MQ=60)
                                                           ATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGA                                    <  SRR4302543.3051484/94‑1 (MQ=60)
                                                           ATGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGA                                    >  SRR4302543.4142719/1‑94 (MQ=60)
                                                            TGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGAT                                   <  SRR4302543.4617488/94‑1 (MQ=60)
                                                            TGCTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGAT                                   <  SRR4302543.2645135/94‑1 (MQ=60)
                                                              GTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCC                                 <  SRR4302543.6731192/94‑1 (MQ=60)
                                                              CTCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCC                                 <  SRR4302543.2897838/94‑1 (MQ=60)
                                                              CTCGATAACCGCGCTAACTGGAAGATTGATCGGGGGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCATAATCTTATCC                                 >  SRR4302543.5233692/1‑94 (MQ=60)
                                                               TCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCG                                <  SRR4302543.7002241/94‑1 (MQ=60)
                                                               TCGATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCG                                <  SRR4302543.4953868/94‑1 (MQ=60)
                                                                 GATAACCGCGCTAACTGGAAGATTGATCGGTTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCT                              <  SRR4302543.702487/94‑1 (MQ=60)
                                                                 GATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCT                              <  SRR4302543.7929641/94‑1 (MQ=60)
                                                                 GATAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCT                              >  SRR4302543.1480908/1‑94 (MQ=60)
                                                                   TAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGCTCCGCTTT                            >  SRR4302543.6447910/1‑94 (MQ=60)
                                                                   TAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTT                            <  SRR4302543.6648552/94‑1 (MQ=60)
                                                                   TAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTT                            <  SRR4302543.7803609/94‑1 (MQ=60)
                                                                   TAACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTGT                            <  SRR4302543.3041705/94‑1 (MQ=60)
                                                                    AACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTG                           <  SRR4302543.5848425/94‑1 (MQ=60)
                                                                    AACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTG                           >  SRR4302543.3767905/1‑94 (MQ=60)
                                                                    AACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTG                           <  SRR4302543.1475917/94‑1 (MQ=60)
                                                                    AACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTG                           <  SRR4302543.4020877/94‑1 (MQ=60)
                                                                     ACCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGC                          >  SRR4302543.2252770/1‑94 (MQ=60)
                                                                      CCGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCG                         >  SRR4302543.5670553/1‑94 (MQ=60)
                                                                       CGCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGC                        >  SRR4302543.2002654/1‑94 (MQ=60)
                                                                        GCGCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCG                       <  SRR4302543.6755342/94‑1 (MQ=60)
                                                                          GCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTC                     <  SRR4302543.1816340/94‑1 (MQ=60)
                                                                          GCTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTC                     <  SRR4302543.5465207/94‑1 (MQ=60)
                                                                           CTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCG                    >  SRR4302543.3528418/1‑94 (MQ=60)
                                                                           CTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCG                    >  SRR4302543.611148/1‑94 (MQ=60)
                                                                           CTAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCG                    >  SRR4302543.3452361/1‑94 (MQ=60)
                                                                            TAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGC                   >  SRR4302543.1489210/1‑94 (MQ=60)
                                                                            TAACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGC                   >  SRR4302543.3981264/1‑94 (MQ=60)
                                                                             AACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCA                  >  SRR4302543.3191541/1‑94 (MQ=60)
                                                                             AACTGGAAGATTGATCGGGTGCGGGAGCCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCA                  <  SRR4302543.587720/94‑1 (MQ=60)
                                                                              ACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAA                 >  SRR4302543.7643482/1‑94 (MQ=60)
                                                                              ACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAA                 >  SRR4302543.3234113/1‑94 (MQ=60)
                                                                              ACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAA                 <  SRR4302543.1851275/94‑1 (MQ=60)
                                                                              ACTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAA                 >  SRR4302543.5934649/1‑94 (MQ=60)
                                                                               CTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAAT                <  SRR4302543.3145825/94‑1 (MQ=60)
                                                                               CTGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAAT                <  SRR4302543.7326476/94‑1 (MQ=60)
                                                                                TGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATA               <  SRR4302543.3024252/94‑1 (MQ=60)
                                                                                TGGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATA               >  SRR4302543.2468415/1‑94 (MQ=60)
                                                                                 GGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAA              <  SRR4302543.952030/94‑1 (MQ=60)
                                                                                 GGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAA              >  SRR4302543.2701610/1‑94 (MQ=60)
                                                                                 GGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAA              <  SRR4302543.6943017/94‑1 (MQ=60)
                                                                                 GGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAA              <  SRR4302543.3099488/94‑1 (MQ=60)
                                                                                 GGAAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAA              <  SRR4302543.4372931/94‑1 (MQ=60)
                                                                                  GAAGAGTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAAC             <  SRR4302543.6607899/94‑1 (MQ=60)
                                                                                   AAGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACC            >  SRR4302543.7035355/1‑94 (MQ=60)
                                                                                    AGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCT           <  SRR4302543.2381701/94‑1 (MQ=60)
                                                                                    AGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCT           <  SRR4302543.4634308/94‑1 (MQ=60)
                                                                                    AGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCT           <  SRR4302543.4634310/94‑1 (MQ=60)
                                                                                    AGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCT           <  SRR4302543.5328949/94‑1 (MQ=60)
                                                                                    AGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCT           <  SRR4302543.5626519/94‑1 (MQ=60)
                                                                                    AGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCT           <  SRR4302543.6111168/94‑1 (MQ=60)
                                                                                    AGATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCT           <  SRR4302543.1705751/94‑1 (MQ=60)
                                                                                     GATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTT          <  SRR4302543.615855/94‑1 (MQ=60)
                                                                                     GATTGATCGGATGCGTGAGGCGCACAACGAGATGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGATTTGCGCGTCGCAATAACCTT          >  SRR4302543.5980659/1‑94 (MQ=60)
                                                                                      ATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTA         <  SRR4302543.1475752/94‑1 (MQ=60)
                                                                                      ATTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTA         <  SRR4302543.1771449/94‑1 (MQ=60)
                                                                                       TTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAG        <  SRR4302543.3939483/94‑1 (MQ=60)
                                                                                       TTGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAG        <  SRR4302543.6827415/94‑1 (MQ=60)
                                                                                        TGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGC       >  SRR4302543.474894/1‑94 (MQ=60)
                                                                                        TGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGC       <  SRR4302543.73428/94‑1 (MQ=60)
                                                                                        TGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGC       <  SRR4302543.3684141/94‑1 (MQ=60)
                                                                                        TGATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGC       <  SRR4302543.351747/94‑1 (MQ=60)
                                                                                         GATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCG      <  SRR4302543.7816163/94‑1 (MQ=60)
                                                                                         GATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCG      >  SRR4302543.7189606/1‑94 (MQ=60)
                                                                                          ATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCGT     >  SRR4302543.4822176/1‑94 (MQ=60)
                                                                                          ATCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCGT     >  SRR4302543.6423079/1‑94 (MQ=60)
                                                                                           TCGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCGTC    <  SRR4302543.1063785/94‑1 (MQ=60)
                                                                                            CGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCGTCT   <  SRR4302543.1531141/94‑1 (MQ=60)
                                                                                            CGGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCGTCT   >  SRR4302543.6566708/1‑94 (MQ=60)
                                                                                            CGGGTGCGTGAGGCGCACAACGAGATGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAGCCTTAGCGTCT   <  SRR4302543.7069568/94‑1 (MQ=60)
                                                                                             GGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCGTCTC  >  SRR4302543.5160336/1‑94 (MQ=60)
                                                                                             GGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCGTCTC  >  SRR4302543.6433649/1‑94 (MQ=60)
                                                                                             |                                                                                             
GTCGCGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCAGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCGTCTC  >  NC_000913/3989805‑3989991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: