Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,990	C→T	R109C (CGT→TGT)	yigM →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,990	0	C	T	99.5%	1387.3 / ‑5.0	382	R109C (CGT→TGT)	yigM	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (2/0); new base T (173/207); total (175/207)
Fisher's exact test for biased strand distribution p-value = 2.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.42e-01

Only 100 of 387 total aligned reads displayed.

TATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCCGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGG  >  NC_000913/4008900‑4009079

 aTCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTc                                                                                        >  2:7674116/1‑93 (MQ=255)

 aTCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTc                                                                                        >  2:2041039/1‑93 (MQ=255)

 aTCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTc                                                                                        <  1:2940561/93‑1 (MQ=255)

  tctcTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGCGTAAACGCTGTCt                                                                                       >  2:2237551/1‑93 (MQ=255)

  tctcTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCt                                                                                       >  1:7773175/1‑93 (MQ=255)

   ctctACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTg                                                                                      <  1:5549011/93‑1 (MQ=255)

    tctACCTGACGGTTGCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTgc                                                                                     <  1:1620462/93‑1 (MQ=255)

      tACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTgcgc                                                                                   <  2:4061069/93‑1 (MQ=255)

      tACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTgcgc                                                                                   >  2:3964420/1‑93 (MQ=255)

        ccTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTg                                                                                 >  1:5682097/1‑93 (MQ=255)

        ccTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTg                                                                                 <  1:2745240/93‑1 (MQ=255)

         cTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTgg                                                                                >  1:6188101/1‑93 (MQ=255)

         cTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTgg                                                                                >  1:3038819/1‑93 (MQ=255)

          tGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTggg                                                                               <  1:7291277/93‑1 (MQ=255)

           gACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTgggg                                                                              <  2:5184767/93‑1 (MQ=255)

            aCGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGc                                                                             <  1:2303821/93‑1 (MQ=255)

              ggTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTa                                                                           <  1:7919084/93‑1 (MQ=255)

              ggTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTa                                                                           <  2:6397464/93‑1 (MQ=255)

               gTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTAt                                                                          <  1:6863454/93‑1 (MQ=255)

               gTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTAt                                                                          <  2:4399341/93‑1 (MQ=255)

                  tCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGcc                                                                       <  1:4418354/93‑1 (MQ=255)

                    cGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCtt                                                                     >  2:6864262/1‑93 (MQ=255)

                     gAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCttt                                                                    >  2:3796320/1‑93 (MQ=255)

                     gAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCttt                                                                    >  1:4972385/1‑93 (MQ=255)

                      aGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTa                                                                   <  2:1101776/93‑1 (MQ=255)

                       gctgctgctGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAg                                                                  <  2:1804564/93‑1 (MQ=255)

                       gctgctgctGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAg                                                                  >  2:461004/1‑93 (MQ=255)

                       gctgctgctGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAg                                                                  <  1:2259910/93‑1 (MQ=255)

                        ctgctgctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAgc                                                                 <  2:13260/93‑1 (MQ=255)

                         tgctgctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAgcg                                                                >  1:522351/1‑93 (MQ=255)

                          gctgctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAgcgc                                                               >  1:3186785/1‑93 (MQ=255)

                          gctgctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAgcgc                                                               >  2:7840938/1‑93 (MQ=255)

                           ctgctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGcc                                                              <  2:6442044/93‑1 (MQ=255)

                            tgctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCt                                                             <  2:5613213/93‑1 (MQ=255)

                             gctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCtt                                                            <  1:7053430/93‑1 (MQ=255)

                             gctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCtt                                                            <  1:7640158/93‑1 (MQ=255)

                             gctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCACTGGGGCTATGCCTTTAGCGCCtt                                                            <  2:1410097/93‑1 (MQ=255)

                              ctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTg                                                           >  2:6014313/1‑93 (MQ=255)

                                gTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCt                                                         >  1:109620/1‑93 (MQ=255)

                                 ttCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTg                                                        >  1:4649431/1‑93 (MQ=255)

                                  tCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTgg                                                       <  1:1945716/93‑1 (MQ=255)

                                  tCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTgg                                                       <  1:2476650/93‑1 (MQ=255)

                                  tCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTgg                                                       <  1:3834109/93‑1 (MQ=255)

                                  tCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTgg                                                       <  2:7318465/93‑1 (MQ=255)

                                      cgcgCTGACGTCGCTCTACACCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGt                                                   <  1:7109802/90‑1 (MQ=255)

                                        tGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGa                                                 <  2:3495816/93‑1 (MQ=255)

                                        tGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGa                                                 <  1:1189948/93‑1 (MQ=255)

                                        tGCTGACGCCGCTCTACATCACGCTGATTTATAACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGa                                                 >  1:6929041/1‑93 (MQ=255)

                                         gCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGAt                                                <  2:3317176/93‑1 (MQ=255)

                                         gCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGAt                                                <  1:2636849/93‑1 (MQ=255)

                                         gCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGAt                                                <  2:7379664/93‑1 (MQ=255)

                                          gtGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGAtt                                               <  1:1505128/92‑1 (MQ=255)

                                           tGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTg                                              >  2:2516395/1‑93 (MQ=255)

                                           tGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTg                                              <  1:1001661/93‑1 (MQ=255)

                                           tGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTg                                              <  2:2746018/93‑1 (MQ=255)

                                           tGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTg                                              <  2:4998033/93‑1 (MQ=255)

                                           tGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTg                                              <  1:966831/93‑1 (MQ=255)

                                            gACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTgg                                             <  2:7731973/93‑1 (MQ=255)

                                            gACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTgg                                             <  2:5676238/93‑1 (MQ=255)

                                                  gcTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGCTTGGTGCCgg                                       <  2:5094272/93‑1 (MQ=255)

                                                    tctACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGa                                     >  1:3663552/1‑93 (MQ=255)

                                                    tctACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGa                                     >  2:4708418/1‑93 (MQ=255)

                                                     ctACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGat                                    <  2:3830604/93‑1 (MQ=255)

                                                     ctACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGat                                    >  2:3283457/1‑93 (MQ=255)

                                                       aCATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGatta                                  <  2:3690191/93‑1 (MQ=255)

                                                        cATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGTGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGattat                                 <  2:846946/93‑1 (MQ=255)

                                                        cATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGattat                                 <  2:7484062/93‑1 (MQ=255)

                                                         aTCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGattatt                                >  1:3291103/1‑93 (MQ=255)

                                                          tCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTc                               <  2:3130500/93‑1 (MQ=255)

                                                            aCGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGc                             <  2:2929209/93‑1 (MQ=255)

                                                              gCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTa                           >  2:7133153/1‑93 (MQ=255)

                                                              gCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTa                           <  2:5391503/93‑1 (MQ=255)

                                                              gCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTa                           <  1:6599213/93‑1 (MQ=255)

                                                               cTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTAt                          >  1:6407663/1‑93 (MQ=255)

                                                                tGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATg                         >  1:6477407/1‑93 (MQ=255)

                                                                   tttATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATc                      <  1:5233242/93‑1 (MQ=255)

                                                                   tttATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATc                      >  1:6042268/1‑93 (MQ=255)

                                                                   tttATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATc                      >  2:2068808/1‑93 (MQ=255)

                                                                   tttATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATc                      <  2:4298063/93‑1 (MQ=255)

                                                                    ttATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCa                     <  1:1838829/93‑1 (MQ=255)

                                                                    ttATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCa                     <  1:5409862/93‑1 (MQ=255)

                                                                    ttATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCa                     <  2:2348187/93‑1 (MQ=255)

                                                                    ttATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCa                     <  2:6672581/93‑1 (MQ=255)

                                                                     tATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAg                    <  1:4311134/93‑1 (MQ=255)

                                                                     tATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAg                    >  1:2808942/1‑93 (MQ=255)

                                                                     tATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAg                    <  2:7576712/93‑1 (MQ=255)

                                                                      aTGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAgg                   <  1:3472473/93‑1 (MQ=255)

                                                                      aTGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAgg                   >  2:2799898/1‑93 (MQ=255)

                                                                        gACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTc                 <  2:12696/93‑1 (MQ=255)

                                                                           atcatGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCAcc              >  1:3986649/1‑93 (MQ=255)

                                                                           atcatGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCAcc              <  2:255595/93‑1 (MQ=255)

                                                                              atGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGAc           >  1:4851454/1‑93 (MQ=255)

                                                                               tGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGAcc          <  1:3396945/93‑1 (MQ=255)

                                                                               tGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGAcc          >  1:5916929/1‑93 (MQ=255)

                                                                                  gTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCAtt       <  2:586400/93‑1 (MQ=255)

                                                                                  gTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTAGCTATGATCAGGTCACCGACCAtt       <  1:3132319/93‑1 (MQ=255)

                                                                                   tAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCAttt      >  1:4480807/1‑93 (MQ=255)

                                                                                   tAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCAttt      >  1:7553572/1‑93 (MQ=255)

                                                                                      gcgcTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTg   >  1:4365280/1‑93 (MQ=255)

                                                                                       cgcTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTgg  <  1:828016/93‑1 (MQ=255)

TATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCCGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGG  >  NC_000913/4008900‑4009079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 218 total aligned reads displayed.

GCTTATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCCGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGACTG  >  NC_000913/4008897‑4009083

ccttaccgccagcgggcgggtgCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCT                                                                                               <  SRR4302543.5967330/72‑1 (MQ=60)

GCTTATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCT                                                                                               <  SRR4302543.5967331/94‑1 (MQ=60)

 CTTATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTG                                                                                              <  SRR4302543.5431652/94‑1 (MQ=60)

 CTTATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTG                                                                                              <  SRR4302543.3829935/94‑1 (MQ=60)

 CTTATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTG                                                                                              >  SRR4302543.4976059/1‑94 (MQ=60)

 CTTATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTG                                                                                              <  SRR4302543.6530175/94‑1 (MQ=60)

   TATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTC                                                                                            <  SRR4302543.1329062/94‑1 (MQ=60)

    ATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCT                                                                                           >  SRR4302543.6529759/1‑94 (MQ=60)

    ATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCT                                                                                           <  SRR4302543.3213195/94‑1 (MQ=60)

    ATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCT                                                                                           <  SRR4302543.2967261/94‑1 (MQ=60)

    ATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCT                                                                                           <  SRR4302543.3093442/94‑1 (MQ=60)

    ATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCT                                                                                           >  SRR4302543.7846493/1‑94 (MQ=60)

    ATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCT                                                                                           >  SRR4302543.5489562/1‑94 (MQ=60)

     TCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTG                                                                                          >  SRR4302543.7924014/1‑94 (MQ=60)

      CTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGTTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGC                                                                                         >  SRR4302543.6996812/1‑94 (MQ=60)

      CTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGC                                                                                         <  SRR4302543.5599475/94‑1 (MQ=60)

      CTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGC                                                                                         >  SRR4302543.6191305/1‑94 (MQ=60)

       TCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCG                                                                                        <  SRR4302543.7135550/94‑1 (MQ=60)

       TCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCG                                                                                        >  SRR4302543.924288/1‑94 (MQ=60)

       TCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCG                                                                                        >  SRR4302543.3462025/1‑94 (MQ=60)

       TCTACCTGACGGTTGCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCG                                                                                        <  SRR4302543.1634903/94‑1 (MQ=60)

        CTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGC                                                                                       >  SRR4302543.3947198/1‑94 (MQ=60)

         TACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCT                                                                                      >  SRR4302543.4477109/1‑94 (MQ=60)

         TACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCT                                                                                      <  SRR4302543.6553002/94‑1 (MQ=60)

          ACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTG                                                                                     >  SRR4302543.5733959/1‑94 (MQ=60)

          ACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTG                                                                                     >  SRR4302543.2712627/1‑94 (MQ=60)

           CCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGG                                                                                    >  SRR4302543.3066235/1‑94 (MQ=60)

           CCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGG                                                                                    <  SRR4302543.2770197/94‑1 (MQ=60)

           CCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTACGACATCATGAGTAAGCGCTGTCTGCGCTGG                                                                                    <  SRR4302543.1146156/94‑1 (MQ=60)

            CTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGG                                                                                   >  SRR4302543.5509601/1‑94 (MQ=60)

            CTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGG                                                                                   >  SRR4302543.163162/1‑94 (MQ=60)

            CTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGG                                                                                   >  SRR4302543.6698033/1‑94 (MQ=60)

             TGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGG                                                                                  >  SRR4302543.2282/1‑94 (MQ=60)

             TGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGG                                                                                  <  SRR4302543.7361646/94‑1 (MQ=60)

              GACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGC                                                                                 <  SRR4302543.6462610/94‑1 (MQ=60)

                CGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTA                                                                               >  SRR4302543.4845142/1‑94 (MQ=60)

                 GGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTAT                                                                              <  SRR4302543.5231925/94‑1 (MQ=60)

                 GGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTAT                                                                              >  SRR4302543.6018672/1‑94 (MQ=60)

                 GGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTAT                                                                              <  SRR4302543.7993464/94‑1 (MQ=60)

                 GGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTAT                                                                              >  SRR4302543.1929156/1‑94 (MQ=60)

                 GGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTAT                                                                              <  SRR4302543.5328157/94‑1 (MQ=60)

                 CGTTTCCGAGCTGCTGCTGTGCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTAT                                                                              <  SRR4302543.6964654/94‑1 (MQ=60)

                  GTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATG                                                                             <  SRR4302543.6928124/94‑1 (MQ=60)

                  GTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATG                                                                             >  SRR4302543.1984437/1‑94 (MQ=60)

                  GTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATG                                                                             >  SRR4302543.6039860/1‑94 (MQ=60)

                   TTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGC                                                                            <  SRR4302543.2327016/94‑1 (MQ=60)

                   TTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGC                                                                            <  SRR4302543.1563369/94‑1 (MQ=60)

                     TCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCT                                                                          <  SRR4302543.4458401/94‑1 (MQ=60)

                       CGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTT                                                                        <  SRR4302543.3006300/94‑1 (MQ=60)

                       CGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTT                                                                        >  SRR4302543.5017645/1‑94 (MQ=60)

                        GAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTA                                                                       <  SRR4302543.5068231/94‑1 (MQ=60)

                         AGTTGCTGCTGTTCACCGTGCTGACGCCGCTCTTCATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAG                                                                      <  SRR4302543.6569850/94‑1 (MQ=60)

                         AGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAG                                                                      >  SRR4302543.1902802/1‑94 (MQ=60)

                         AGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAG                                                                      <  SRR4302543.1112928/94‑1 (MQ=60)

                         AGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAG                                                                      >  SRR4302543.1006540/1‑94 (MQ=60)

                         AGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAG                                                                      >  SRR4302543.627046/1‑94 (MQ=60)

                         AGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAG                                                                      <  SRR4302543.6215367/94‑1 (MQ=60)

                          GCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGC                                                                     <  SRR4302543.4691475/94‑1 (MQ=60)

                          GCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGC                                                                     <  SRR4302543.3740631/94‑1 (MQ=60)

                          GCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGC                                                                     <  SRR4302543.2280509/94‑1 (MQ=60)

                           CTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCG                                                                    >  SRR4302543.527193/1‑94 (MQ=60)

                           CTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCG                                                                    >  SRR4302543.527194/1‑94 (MQ=60)

                           CTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCG                                                                    >  SRR4302543.7577815/1‑94 (MQ=60)

                            TGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGC                                                                   >  SRR4302543.3215522/1‑94 (MQ=60)

                            TGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGC                                                                   >  SRR4302543.5948854/1‑94 (MQ=60)

                            TGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGC                                                                   >  SRR4302543.2770986/1‑94 (MQ=60)

                            TGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAACCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGC                                                                   >  SRR4302543.1588896/1‑94 (MQ=60)

                             GCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCC                                                                  >  SRR4302543.1196419/1‑94 (MQ=60)

                              CTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCT                                                                 <  SRR4302543.561512/94‑1 (MQ=60)

                               TGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTT                                                                <  SRR4302543.949204/94‑1 (MQ=60)

                               TGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTT                                                                >  SRR4302543.7743602/1‑94 (MQ=60)

                                GCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTG                                                               <  SRR4302543.7121873/94‑1 (MQ=60)

                                GCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTG                                                               <  SRR4302543.7712631/94‑1 (MQ=60)

                                 CTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGC                                                              <  SRR4302543.4008558/94‑1 (MQ=60)

                                 CTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGC                                                              >  SRR4302543.2139060/1‑94 (MQ=60)

                                  TGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCT                                                             >  SRR4302543.3324705/1‑94 (MQ=60)

                                  TGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCT                                                             >  SRR4302543.110620/1‑94 (MQ=60)

                                   GTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTG                                                            >  SRR4302543.7315681/1‑94 (MQ=60)

                                   GTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTG                                                            >  SRR4302543.4691741/1‑94 (MQ=60)

                                    TTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGG                                                           >  SRR4302543.3688943/1‑94 (MQ=60)

                                     TCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGC                                                          <  SRR4302543.1963186/94‑1 (MQ=60)

                                     TCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGC                                                          <  SRR4302543.3867940/94‑1 (MQ=60)

                                     TCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGC                                                          <  SRR4302543.2499047/94‑1 (MQ=60)

                                     TCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGC                                                          <  SRR4302543.4426652/94‑1 (MQ=60)

                                      CACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCG                                                         <  SRR4302543.1370107/94‑1 (MQ=60)

                                      CACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCG                                                         <  SRR4302543.4408142/94‑1 (MQ=60)

                                         CGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTG                                                      <  SRR4302543.6682383/94‑1 (MQ=60)

                                         CGCGCTGACGTCGCTCTACACCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTG                                                      <  SRR4302543.7178872/94‑1 (MQ=60)

                                          GTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGT                                                     >  SRR4302543.2486376/1‑94 (MQ=60)

                                          GTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGA                                                     >  SRR4302543.4486344/1‑94 (MQ=60)

                                          GTGCTGACGCCGCTCTACATCACGCTGATTTATAACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGA                                                     >  SRR4302543.6994209/1‑94 (MQ=60)

                                           TGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGAT                                                    <  SRR4302543.1200679/94‑1 (MQ=60)

                                            GCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATT                                                   <  SRR4302543.3368894/94‑1 (MQ=60)

                                            GCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATT                                                   <  SRR4302543.2660729/94‑1 (MQ=60)

                                             GTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTG                                                  <  SRR4302543.1518652/94‑1 (MQ=60)

                                             CTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTG                                                  <  SRR4302543.4148931/94‑1 (MQ=60)

                                             CTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTG                                                  <  SRR4302543.716667/94‑1 (MQ=60)

                                              TGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGG                                                 <  SRR4302543.1010509/94‑1 (MQ=60)

                                              TGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGG                                                 <  SRR4302543.3028814/94‑1 (MQ=60)

                                               GACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGT                                                <  SRR4302543.2664136/94‑1 (MQ=60)

                                               GACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGT                                                <  SRR4302543.3214863/94‑1 (MQ=60)

                                               GACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGT                                                <  SRR4302543.4904762/94‑1 (MQ=60)

                                                  GCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCC                                             >  SRR4302543.2063609/1‑94 (MQ=60)

                                                  GCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCC                                             <  SRR4302543.3257887/94‑1 (MQ=60)

                                                  CCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCC                                             <  SRR4302543.4412213/94‑1 (MQ=60)

                                                   CCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCG                                            >  SRR4302543.6931145/1‑94 (MQ=60)

                                                   CCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCG                                            >  SRR4302543.6931144/1‑94 (MQ=60)

                                                    CGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGG                                           >  SRR4302543.3488590/1‑94 (MQ=60)

                                                    CGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGG                                           >  SRR4302543.682102/1‑94 (MQ=60)

                                                      CTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGA                                         >  SRR4302543.6202832/1‑94 (MQ=60)

                                                       TCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGAT                                        >  SRR4302543.2942962/1‑94 (MQ=60)

                                                       TCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGAT                                        >  SRR4302543.4635261/1‑94 (MQ=60)

                                                         TACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGTCGGTGATTGGTGCCGGGATTA                                      >  SRR4302543.7218772/1‑94 (MQ=60)

                                                         TACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTA                                      <  SRR4302543.2543450/94‑1 (MQ=60)

                                                         TACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTA                                      >  SRR4302543.4359891/1‑94 (MQ=60)

                                                          ACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTAT                                     >  SRR4302543.5685421/1‑94 (MQ=60)

                                                          ACATCACGCTGATTTAAGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTAT                                     <  SRR4302543.542695/94‑1 (MQ=60)

                                                           CATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATT                                    <  SRR4302543.4700544/94‑1 (MQ=60)

                                                            ATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTC                                   >  SRR4302543.6503226/1‑94 (MQ=60)

                                                            ATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTC                                   <  SRR4302543.3690636/94‑1 (MQ=60)

                                                            ATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGACTGGTGCCGGGATTATTC                                   <  SRR4302543.5515912/94‑1 (MQ=60)

                                                             TCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCG                                  <  SRR4302543.3919055/94‑1 (MQ=60)

                                                             TCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCG                                  <  SRR4302543.4327709/94‑1 (MQ=60)

                                                              CACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGC                                 >  SRR4302543.3627929/1‑94 (MQ=60)

                                                               ACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCT                                >  SRR4302543.1684831/1‑94 (MQ=60)

                                                                CGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTA                               >  SRR4302543.1674481/1‑94 (MQ=60)

                                                                CGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTA                               >  SRR4302543.4707101/1‑94 (MQ=60)

                                                                 GCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTAT                              <  SRR4302543.6550320/94‑1 (MQ=60)

                                                                 GCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTAT                              >  SRR4302543.6468010/1‑94 (MQ=60)

                                                                  CTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATG                             >  SRR4302543.3748518/1‑94 (MQ=60)

                                                                  CTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATG                             >  SRR4302543.6538435/1‑94 (MQ=60)

                                                                   TGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGA                            <  SRR4302543.3247431/94‑1 (MQ=60)

                                                                    GATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGAT                           <  SRR4302543.106160/94‑1 (MQ=60)

                                                                    GATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGAT                           <  SRR4302543.7829776/94‑1 (MQ=60)

                                                                    GATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGAT                           <  SRR4302543.2932258/94‑1 (MQ=60)

                                                                     ATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATC                          >  SRR4302543.5023274/1‑94 (MQ=60)

                                                                     ATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATC                          >  SRR4302543.6099455/1‑94 (MQ=60)

                                                                     ATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATC                          >  SRR4302543.6099456/1‑94 (MQ=60)

                                                                      TTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCA                         <  SRR4302543.5280392/94‑1 (MQ=60)

                                                                      TTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCA                         <  SRR4302543.822910/94‑1 (MQ=60)

                                                                      TTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCA                         <  SRR4302543.765058/94‑1 (MQ=60)

                                                                      TTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCA                         <  SRR4302543.1709105/94‑1 (MQ=60)

                                                                       TTATGACATCATGTGCAGGCGCTGTCTGCGCTGGGGCTATGCCTTTCGCGTCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAG                        <  SRR4302543.7127011/94‑1 (MQ=60)

                                                                       TTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAG                        <  SRR4302543.5459051/94‑1 (MQ=60)

                                                                       TTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAG                        >  SRR4302543.2834654/1‑94 (MQ=60)

                                                                       TTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAG                        <  SRR4302543.7579580/94‑1 (MQ=60)

                                                                       TTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAG                        <  SRR4302543.1855367/94‑1 (MQ=60)

                                                                       TTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAG                        <  SRR4302543.2637209/94‑1 (MQ=60)

                                                                        TATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGG                       <  SRR4302543.1019878/94‑1 (MQ=60)

                                                                        TATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGG                       <  SRR4302543.4350289/94‑1 (MQ=60)

                                                                        TATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGG                       <  SRR4302543.4366098/94‑1 (MQ=60)

                                                                         ATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGT                      <  SRR4302543.1869700/94‑1 (MQ=60)

                                                                         ATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGT                      <  SRR4302543.3503573/94‑1 (MQ=60)

                                                                         ATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGT                      <  SRR4302543.3427823/94‑1 (MQ=60)

                                                                         ATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGT                      <  SRR4302543.3359260/94‑1 (MQ=60)

                                                                            ACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCAC                   >  SRR4302543.7996644/1‑94 (MQ=60)

                                                                             CATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACC                  <  SRR4302543.7678622/94‑1 (MQ=60)

                                                                             CATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACC                  >  SRR4302543.2842986/1‑94 (MQ=60)

                                                                             CATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACC                  >  SRR4302543.4022051/1‑94 (MQ=60)

                                                                              ATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCG                 >  SRR4302543.459975/1‑94 (MQ=60)

                                                                              ATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCG                 >  SRR4302543.7853084/1‑94 (MQ=60)

                                                                              ATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCG                 >  SRR4302543.2560264/1‑94 (MQ=60)

                                                                              ATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCG                 >  SRR4302543.5825346/1‑94 (MQ=60)

                                                                              ATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCG                 >  SRR4302543.2820974/1‑94 (MQ=60)

                                                                                CATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGAC               <  SRR4302543.568869/94‑1 (MQ=60)

                                                                                CATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGAC               >  SRR4302543.4895697/1‑94 (MQ=60)

                                                                                CATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGAC               >  SRR4302543.7295484/1‑94 (MQ=60)

                                                                                 ccGAGTAAGCGCTGTCTGCGCTGGGGCTATGCATTTAGCTCCGTGCTGACGGTGATTGGTTCCGGGATTATTCGCTATGATCAGGTCACCGACC              <  SRR4302543.849812/92‑1 (MQ=60)

                                                                                 CTGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACC              <  SRR4302543.849813/94‑1 (MQ=60)

                                                                                 ATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACC              <  SRR4302543.2454256/94‑1 (MQ=60)

                                                                                 ATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACC              <  SRR4302543.2812055/94‑1 (MQ=60)

                                                                                 ATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACC              >  SRR4302543.5970973/1‑94 (MQ=60)

                                                                                 ATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGGCACCGACC              >  SRR4302543.5272282/1‑94 (MQ=60)

                                                                                  TGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCA             <  SRR4302543.3427389/94‑1 (MQ=60)

                                                                                    AGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATT           <  SRR4302543.3863769/94‑1 (MQ=60)

                                                                                    AGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATT           >  SRR4302543.2294619/1‑94 (MQ=60)

                                                                                    AGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGGGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATT           >  SRR4302543.3132777/1‑94 (MQ=60)

                                                                                     GTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTT          >  SRR4302543.7625506/1‑94 (MQ=60)

                                                                                     GTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTT          >  SRR4302543.7714455/1‑94 (MQ=60)

                                                                                     GTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTT          >  SRR4302543.4521495/1‑94 (MQ=60)

                                                                                     GTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTAGCTATGATCAGGTCACCGACCATTT          <  SRR4302543.3160493/94‑1 (MQ=60)

                                                                                      TAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTC         >  SRR4302543.4978794/1‑94 (MQ=60)

                                                                                       AAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCT        <  SRR4302543.3275216/94‑1 (MQ=60)

                                                                                        AGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTG       <  SRR4302543.6359713/94‑1 (MQ=60)

                                                                                        AGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTG       >  SRR4302543.4404824/1‑94 (MQ=60)

                                                                                        AGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTG       <  SRR4302543.3071551/94‑1 (MQ=60)

                                                                                        AGCGCTGTCTGCGCTGGGGCTATGACTTTAGCGCCTTGCTGGCGGAGATTGGTGCCGGGATTATTCGCTATGAACAGGTCACCGACCATTTATG       <  SRR4302543.7066746/94‑1 (MQ=60)

                                                                                          CGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGA     >  SRR4302543.3845750/1‑94 (MQ=60)

                                                                                          CGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGA     <  SRR4302543.835317/94‑1 (MQ=60)

                                                                                          CGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGA     <  SRR4302543.835318/94‑1 (MQ=60)

                                                                                           GCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGAC    <  SRR4302543.7977074/94‑1 (MQ=60)

                                                                                           GCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGAC    >  SRR4302543.5664866/1‑94 (MQ=60)

                                                                                            CTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGACT   <  SRR4302543.7493896/94‑1 (MQ=60)

                                                                                            CTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGACT   <  SRR4302543.1332660/94‑1 (MQ=60)

                                                                                            CTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGACT   <  SRR4302543.2632657/94‑1 (MQ=60)

                                                                                            CTGTCTGCGCTGGCGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGACT   <  SRR4302543.2078862/94‑1 (MQ=60)

                                                                                             TGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGACTG  <  SRR4302543.2063128/94‑1 (MQ=60)

                                                                                             TGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGACTG  >  SRR4302543.1598189/1‑94 (MQ=60)

                                                                                             TGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGACTG  <  SRR4302543.6758425/94‑1 (MQ=60)

                                                                                             TGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGACTG  <  SRR4302543.6758424/94‑1 (MQ=60)

GCTTATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCCGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGACTG  >  NC_000913/4008897‑4009083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`