Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,013,772	+C	intergenic (‑53/‑246)	ysgA ← / → udp	hypothetical protein/uridine phosphorylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,013,770	1	.	C	99.7%	1090.6 / ‑4.3	346	intergenic (‑51/‑248)	ysgA/udp	hypothetical protein/uridine phosphorylase
Reads supporting (aligned to +/- strand): ref base . (0/1); new base C (181/164); total (181/165)
Fisher's exact test for biased strand distribution p-value = 4.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.17e-01

Only 100 of 371 total aligned reads displayed.

GCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGC‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑C‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTG  >  NC_000913/4013679‑4013857

  gtcgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑c‑c                                                                                       <  1:5320974/93‑1 (MQ=255)

   tcgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑c‑cc                                                                                      <  2:1790516/93‑2 (MQ=255)

     gtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑c‑cctt                                                                                    >  1:2042508/1‑90 (MQ=255)

     gtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑c‑cctt                                                                                    >  2:4384492/1‑90 (MQ=255)

        cGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTtata                                                                                  >  2:3518865/1‑93 (MQ=255)

        cGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTtata                                                                                  >  2:2232670/1‑93 (MQ=255)

        cGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTtata                                                                                  <  1:340189/93‑1 (MQ=255)

        cGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTtata                                                                                  >  1:3073690/1‑93 (MQ=255)

         ggggTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaa                                                                                 >  1:7687684/1‑93 (MQ=255)

          gggTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaaa                                                                                >  1:4058645/1‑93 (MQ=255)

          gggTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaaa                                                                                >  2:6837172/1‑93 (MQ=255)

           ggTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaaaa                                                                               >  1:5174071/1‑93 (MQ=255)

             tCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAAt                                                                             <  2:1117449/93‑1 (MQ=255)

             tCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAAt                                                                             <  1:3941273/93‑1 (MQ=255)

              cTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATg                                                                            >  1:2199471/1‑93 (MQ=255)

               tGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGt                                                                           >  2:7141193/1‑93 (MQ=255)

               tGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGt                                                                           <  2:4699194/93‑1 (MQ=255)

               tGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGt                                                                           <  2:3907859/93‑1 (MQ=255)

                gAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGtt                                                                          <  2:4487804/93‑1 (MQ=255)

                gAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGtt                                                                          <  1:6677231/93‑1 (MQ=255)

                gAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGtt                                                                          <  2:6656340/93‑1 (MQ=255)

                gAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGtt                                                                          >  2:6806350/1‑93 (MQ=255)

                gAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGtt                                                                          >  2:5381137/1‑93 (MQ=255)

                 aaCGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTg                                                                         >  1:1546506/1‑93 (MQ=255)

                 aaCGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTg                                                                         <  2:4806918/93‑1 (MQ=255)

                  aCGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTgc                                                                        <  1:3831932/93‑1 (MQ=255)

                  aCGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTgc                                                                        >  1:6052027/1‑93 (MQ=255)

                  aCGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTgc                                                                        >  1:7450823/1‑93 (MQ=255)

                   cGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTcgcg                                                                       >  1:878922/1‑93 (MQ=255)

                   cGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTgcg                                                                       >  2:6790113/1‑93 (MQ=255)

                    gATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTgcgc                                                                      >  2:500033/1‑93 (MQ=255)

                         tCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGt                                                                 <  2:6060524/93‑1 (MQ=255)

                           gAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTa                                                               >  2:1387877/1‑93 (MQ=255)

                           gAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTa                                                               <  2:7654797/93‑1 (MQ=255)

                            aaGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTaa                                                              >  1:5846160/1‑93 (MQ=255)

                            aaGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTaa                                                              <  1:2454387/93‑1 (MQ=255)

                            aaGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTaa                                                              <  1:6303429/93‑1 (MQ=255)

                              gCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACt                                                            <  2:7202591/93‑1 (MQ=255)

                              gCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACt                                                            >  1:6796905/1‑93 (MQ=255)

                              gCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACt                                                            >  2:2458350/1‑93 (MQ=255)

                               cGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACta                                                           <  1:4309541/93‑1 (MQ=255)

                                gagaGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACtat                                                          >  2:1506542/1‑93 (MQ=255)

                                 agagGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACtata                                                         <  2:5907111/93‑1 (MQ=255)

                                 agagGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACtata                                                         <  1:95578/93‑1 (MQ=255)

                                 agagGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACtata                                                         <  2:5790036/93‑1 (MQ=255)

                                    ggcgaTGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTc                                                      <  2:3358280/89‑1 (MQ=255)

                                    ggcgaTGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACCATAGTc                                                      <  1:1911888/89‑1 (MQ=255)

                                     gcgaTGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCa                                                     >  1:4578600/4‑93 (MQ=255)

                                     gcgaTGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCa                                                     >  1:462746/4‑93 (MQ=255)

                                      cgaTGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAg                                                    <  2:1708653/91‑1 (MQ=255)

                                        aTGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCa                                                  >  1:3635269/1‑93 (MQ=255)

                                        aTGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCa                                                  <  1:7813758/93‑1 (MQ=255)

                                         tGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCAt                                                 <  2:4177506/93‑1 (MQ=255)

                                               agGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGcaaca                                           <  2:1986557/93‑1 (MQ=255)

                                               agGTGCAAATCCAGAGTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGcaaca                                           <  2:5977808/93‑1 (MQ=255)

                                                ggTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGcaacaa                                          >  2:3022140/1‑93 (MQ=255)

                                                 gTGCAAATCCAGATTGTTTTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACaaa                                         >  1:4865125/1‑93 (MQ=255)

                                                 gTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACaaa                                         >  2:3278650/1‑93 (MQ=255)

                                                 gTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACaaa                                         <  1:6211344/93‑1 (MQ=255)

                                                   gCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATc                                       >  1:6494929/1‑93 (MQ=255)

                                                    cAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCTGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATca                                      >  1:510150/1‑93 (MQ=255)

                                                      aaTCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATcaca                                    <  1:7900232/93‑1 (MQ=255)

                                                       aTCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACAt                                   <  1:6960656/93‑1 (MQ=255)

                                                       aTCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACAt                                   <  1:3372418/93‑1 (MQ=255)

                                                        tCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACAtt                                  <  2:2670680/93‑1 (MQ=255)

                                                        tCCAGATTGTTGCGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACAtt                                  >  2:2767529/1‑93 (MQ=255)

                                                        accAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACAtt                                  <  1:6441702/92‑1 (MQ=255)

                                                          cAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGc                                >  2:1237179/1‑93 (MQ=255)

                                                          cAGATTGTTGTGTTGTTGCCATGGTATTCTACGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGc                                <  2:7729870/93‑1 (MQ=255)

                                                           aGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGcc                               <  1:6923759/93‑1 (MQ=255)

                                                           aGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGcc                               >  1:2862523/1‑93 (MQ=255)

                                                            gATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCt                              >  2:5108906/1‑93 (MQ=255)

                                                              ttgttgTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGa                            >  1:7614696/1‑93 (MQ=255)

                                                               tgttgtgttgTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGaa                           <  1:2292509/93‑1 (MQ=255)

                                                                gttgtgttgtTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAAt                          >  1:2974110/1‑93 (MQ=255)

                                                                 ttgtgttgtTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATc                         <  2:6434711/93‑1 (MQ=255)

                                                                 ttgtgttgtTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATc                         <  1:5708673/93‑1 (MQ=255)

                                                                   gtgttgtTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCgg                       <  2:7616532/93‑1 (MQ=255)

                                                                   gtgttgtTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCgg                       <  1:1118313/93‑1 (MQ=255)

                                                                      ttgttgCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTc                    >  2:367608/1‑93 (MQ=255)

                                                                           gCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCtt               >  1:932371/1‑93 (MQ=255)

                                                                            ccATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCttt              >  1:1185323/1‑93 (MQ=255)

                                                                            ccATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCttt              >  1:1740853/1‑93 (MQ=255)

                                                                              aTGGTATTCTCCGTC‑CGCTTATAAAAATCTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTa            <  2:5076081/93‑1 (MQ=255)

                                                                              aTGGTATTCTCCGTACC‑CTTATAAGAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTa            <  2:7870285/93‑1 (MQ=255)

                                                                              aTGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTa            >  2:2989264/1‑93 (MQ=255)

                                                                              aTGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTa            >  2:1518891/1‑93 (MQ=255)

                                                                              aTGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTa            <  1:5955822/93‑1 (MQ=255)

                                                                              aTGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTa            >  1:4474865/1‑93 (MQ=255)

                                                                              aTGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTa            >  2:7402450/1‑93 (MQ=255)

                                                                                 gTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCACCAAATCACATTGCCTGCATCGGCTCATCTTTTATga         >  1:2684678/1‑92 (MQ=255)

                                                                                 gTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGc         <  1:7571163/93‑1 (MQ=255)

                                                                                  tATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCa        >  2:4605073/1‑93 (MQ=255)

                                                                                  tATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCa        <  1:5250528/93‑1 (MQ=255)

                                                                                   aTTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAg       <  2:283328/93‑1 (MQ=255)

                                                                                    ttCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGt      >  1:6403340/1‑93 (MQ=255)

                                                                                      ctcCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTcc    <  1:544661/93‑1 (MQ=255)

                                                                                      ctcCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTcc    <  2:6918208/93‑1 (MQ=255)

                                                                                       tcCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGGCTGAATCGGCTCATCTTTTATGGACTCCt   >  1:558094/1‑93 (MQ=255)

                                                                                       tcCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCt   >  2:6554557/1‑93 (MQ=255)

GCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGC‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑C‑CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTG  >  NC_000913/4013679‑4013857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 221 total aligned reads displayed.

CGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGC‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑CCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATGA  >  NC_000913/4013680‑4013865

CGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑CC                                                                                               >  SRR4302543.2880809/1‑94 (MQ=60)

 GTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑CCC                                                                                              <  SRR4302543.5369066/94‑1 (MQ=60)

 GTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑CCC                                                                                              >  SRR4302543.4781925/1‑94 (MQ=60)

   CGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑CCctt                                                                                            >  SRR4302543.2060823/1‑91 (MQ=60)

     TCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTAT                                                                                           <  SRR4302543.1984321/94‑1 (MQ=60)

      CCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATA                                                                                          >  SRR4302543.7778811/1‑94 (MQ=60)

      CCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATA                                                                                          >  SRR4302543.3101329/1‑94 (MQ=60)

      CCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATA                                                                                          >  SRR4302543.2971079/1‑94 (MQ=60)

       CGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAA                                                                                         <  SRR4302543.343322/94‑1 (MQ=60)

       CGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAA                                                                                         <  SRR4302543.1868020/94‑1 (MQ=60)

        GGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAA                                                                                        >  SRR4302543.6456628/1‑94 (MQ=60)

        GGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAA                                                                                        >  SRR4302543.4094983/1‑94 (MQ=60)

         GGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAA                                                                                       >  SRR4302543.5220790/1‑94 (MQ=60)

         GGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAA                                                                                       >  SRR4302543.5220791/1‑94 (MQ=60)

          GGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAA                                                                                      <  SRR4302543.1322364/94‑1 (MQ=60)

          GGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAA                                                                                      <  SRR4302543.2967608/94‑1 (MQ=60)

          GGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATACTCCGTCC‑CCTTATAAAAA                                                                                      <  SRR4302543.3457174/94‑1 (MQ=60)

           GTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAAT                                                                                     <  SRR4302543.7980383/94‑1 (MQ=60)

           GTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAAT                                                                                     <  SRR4302543.3037893/94‑1 (MQ=60)

           GTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAAT                                                                                     <  SRR4302543.5347485/94‑1 (MQ=60)

            TCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATG                                                                                    >  SRR4302543.2219258/1‑94 (MQ=60)

             CTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGT                                                                                   >  SRR4302543.4124498/1‑94 (MQ=60)

             CTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGT                                                                                   >  SRR4302543.4175475/1‑94 (MQ=60)

             CTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGT                                                                                   <  SRR4302543.3946909/94‑1 (MQ=60)

             CTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGT                                                                                   >  SRR4302543.4101379/1‑94 (MQ=60)

              TGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTT                                                                                  <  SRR4302543.5074605/94‑1 (MQ=60)

               GAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTG                                                                                 <  SRR4302543.2241405/94‑1 (MQ=60)

               GAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTG                                                                                 >  SRR4302543.1560351/1‑94 (MQ=60)

                AACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGC                                                                                <  SRR4302543.2084013/94‑1 (MQ=60)

                AACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGC                                                                                >  SRR4302543.6109315/1‑94 (MQ=60)

                AACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGC                                                                                <  SRR4302543.4494085/94‑1 (MQ=60)

                AACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGC                                                                                >  SRR4302543.7522220/1‑94 (MQ=60)

                AACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGC                                                                                >  SRR4302543.7522219/1‑94 (MQ=60)

                 ACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCG                                                                               <  SRR4302543.3865738/94‑1 (MQ=60)

                 ACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTCGCG                                                                               >  SRR4302543.886728/1‑94 (MQ=60)

                  CGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGC                                                                              <  SRR4302543.3037758/94‑1 (MQ=60)

                   GATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCA                                                                             >  SRR4302543.2501822/1‑94 (MQ=60)

                    ATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAA                                                                            >  SRR4302543.1498761/1‑94 (MQ=60)

                     TGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAAT                                                                           <  SRR4302543.3398249/94‑1 (MQ=60)

                      GGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATG                                                                          <  SRR4302543.6363346/94‑1 (MQ=60)

                      GGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATG                                                                          <  SRR4302543.6271970/94‑1 (MQ=60)

                        TCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTT                                                                        <  SRR4302543.777878/94‑1 (MQ=60)

                          GAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAA                                                                      >  SRR4302543.5899350/1‑94 (MQ=60)

                           AAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAAC                                                                     <  SRR4302543.6362731/94‑1 (MQ=60)

                           AAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAAC                                                                     <  SRR4302543.2476527/94‑1 (MQ=60)

                            AGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACT                                                                    >  SRR4302543.6861091/1‑94 (MQ=60)

                            AGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACT                                                                    <  SRR4302543.251464/94‑1 (MQ=60)

                              CGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTAT                                                                  <  SRR4302543.4348686/94‑1 (MQ=60)

                               cagaggggATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGC‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATA                                                                 <  SRR4302543.2091043/86‑1 (MQ=60)

                               GAGAGGCGATGCAGCAGGTGCAAATCGAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATA                                                                 <  SRR4302543.3423068/94‑1 (MQ=60)

                                AGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAG                                                                >  SRR4302543.341991/1‑94 (MQ=60)

                                AGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAG                                                                >  SRR4302543.7236571/1‑94 (MQ=60)

                                AGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAG                                                                >  SRR4302543.5928454/1‑94 (MQ=60)

                                AGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAG                                                                <  SRR4302543.3151930/94‑1 (MQ=60)

                                AGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAG                                                                <  SRR4302543.783640/94‑1 (MQ=60)

                                AGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAG                                                                >  SRR4302543.531754/1‑94 (MQ=60)

                                  AGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTC                                                              <  SRR4302543.1239234/94‑1 (MQ=60)

                                  AGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTC                                                              >  SRR4302543.7672717/1‑94 (MQ=60)

                                   GGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCA                                                             >  SRR4302543.7531024/1‑94 (MQ=60)

                                   GGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCA                                                             >  SRR4302543.4620218/1‑94 (MQ=60)

                                   GGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCA                                                             >  SRR4302543.467050/1‑94 (MQ=60)

                                   GGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACCATAGTCA                                                             <  SRR4302543.1929122/94‑1 (MQ=60)

                                    gcgATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAG                                                            <  SRR4302543.5507584/91‑1 (MQ=60)

                                    gcgATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAG                                                            <  SRR4302543.2433230/91‑1 (MQ=60)

                                    gcgATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAG                                                            <  SRR4302543.5369130/91‑1 (MQ=60)

                                     cgATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGC                                                           <  SRR4302543.4005990/92‑1 (MQ=60)

                                     G‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCA                                                          >  SRR4302543.3667261/1‑94 (MQ=60)

                                     G‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCA                                                          >  SRR4302543.3667260/1‑94 (MQ=60)

                                     G‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCA                                                          >  SRR4302543.5702047/1‑94 (MQ=60)

                                       ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCAT                                                         >  SRR4302543.3973776/1‑94 (MQ=60)

                                       ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCAT                                                         <  SRR4302543.7887393/94‑1 (MQ=60)

                                        TGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATG                                                        >  SRR4302543.5867731/1‑94 (MQ=60)

                                          CAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCA                                                      >  SRR4302543.4784272/1‑94 (MQ=60)

                                          CAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCA                                                      >  SRR4302543.5991990/1‑94 (MQ=60)

                                          CAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCA                                                      >  SRR4302543.3920145/1‑94 (MQ=60)

                                          CAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCA                                                      >  SRR4302543.5668879/1‑94 (MQ=60)

                                           AGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAA                                                     >  SRR4302543.4595799/1‑94 (MQ=60)

                                            GCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAAC                                                    <  SRR4302543.6326877/94‑1 (MQ=60)

                                             CAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACA                                                   <  SRR4302543.7755943/94‑1 (MQ=60)

                                               GGTGCAAATCCAGATTGTTTTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAA                                                 >  SRR4302543.4909474/1‑94 (MQ=60)

                                                GTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAAT                                                >  SRR4302543.1605710/1‑94 (MQ=60)

                                                GTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAAT                                                <  SRR4302543.6754393/94‑1 (MQ=60)

                                                GTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAAT                                                <  SRR4302543.6269993/94‑1 (MQ=60)

                                                 TGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATC                                               <  SRR4302543.5699378/94‑1 (MQ=60)

                                                 TGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATC                                               <  SRR4302543.4053139/94‑1 (MQ=60)

                                                 TGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATC                                               >  SRR4302543.6556117/1‑94 (MQ=60)

                                                  GCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCA                                              <  SRR4302543.6199519/94‑1 (MQ=60)

                                                  GCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCA                                              <  SRR4302543.4933942/94‑1 (MQ=60)

                                                  GCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCA                                              >  SRR4302543.6606692/1‑94 (MQ=60)

                                                   CAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCAC                                             <  SRR4302543.2440901/94‑1 (MQ=60)

                                                    AAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACA                                            >  SRR4302543.4562890/1‑94 (MQ=60)

                                                    AAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACA                                            <  SRR4302543.6817978/94‑1 (MQ=60)

                                                     AATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACAT                                           <  SRR4302543.7974495/94‑1 (MQ=60)

                                                     AATCCAGAGTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAAGTATAGTCAGCATGCAACAAATCACAT                                           <  SRR4302543.611908/94‑1 (MQ=60)

                                                      ATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATCAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCCACAAATCACATT                                          >  SRR4302543.5276730/1‑94 (MQ=60)

                                                      ATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCGATGTTAACTATAGTCAGCATGCAACAAATCACATT                                          >  SRR4302543.5276729/1‑94 (MQ=60)

                                                      ATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATT                                          >  SRR4302543.5276728/1‑94 (MQ=60)

                                                      ATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATT                                          <  SRR4302543.3402703/94‑1 (MQ=60)

                                                      ATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATT                                          <  SRR4302543.7026153/94‑1 (MQ=60)

                                                      ATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATT                                          <  SRR4302543.7026154/94‑1 (MQ=60)

                                                       TCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTG                                         <  SRR4302543.7662683/94‑1 (MQ=60)

                                                       TCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTG                                         <  SRR4302543.5928822/94‑1 (MQ=60)

                                                       TCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTG                                         <  SRR4302543.5353709/94‑1 (MQ=60)

                                                       ACCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTG                                         <  SRR4302543.6502389/94‑1 (MQ=60)

                                                        CCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGC                                        >  SRR4302543.2023783/1‑94 (MQ=60)

                                                         CAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCT                                       >  SRR4302543.1965300/1‑94 (MQ=60)

                                                         CAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCC                                       <  SRR4302543.641828/94‑1 (MQ=60)

                                                         CAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCC                                       >  SRR4302543.3461383/1‑94 (MQ=60)

                                                          AGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCT                                      <  SRR4302543.6988861/94‑1 (MQ=60)

                                                          AGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCT                                      <  SRR4302543.4623790/94‑1 (MQ=60)

                                                          AGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCT                                      >  SRR4302543.6628680/1‑94 (MQ=60)

                                                          AGATTGTGGTGTTGTTGCCATTGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCT                                      <  SRR4302543.6988860/94‑1 (MQ=60)

                                                           GATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTG                                     <  SRR4302543.368369/94‑1 (MQ=60)

                                                           GATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTG                                     >  SRR4302543.5038477/1‑94 (MQ=60)

                                                            ATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGA                                    >  SRR4302543.7686991/1‑94 (MQ=60)

                                                            ATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGA                                    >  SRR4302543.1597181/1‑94 (MQ=60)

                                                             TTGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAA                                   >  SRR4302543.5806606/1‑94 (MQ=60)

                                                              TGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAAT                                  >  SRR4302543.3001114/1‑94 (MQ=60)

                                                              TGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAAT                                  <  SRR4302543.2313428/94‑1 (MQ=60)

                                                              TGTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAAT                                  >  SRR4302543.7904934/1‑94 (MQ=60)

                                                               GTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATC                                 >  SRR4302543.898676/1‑94 (MQ=60)

                                                               GTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATC                                 <  SRR4302543.3478282/94‑1 (MQ=60)

                                                               GTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATC                                 >  SRR4302543.2229382/1‑94 (MQ=60)

                                                               GTTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCCGAATC                                 >  SRR4302543.3413579/1‑94 (MQ=60)

                                                                TTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCG                                <  SRR4302543.5760753/94‑1 (MQ=60)

                                                                TTGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCG                                <  SRR4302543.3008121/94‑1 (MQ=60)

                                                                 TGTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGG                               <  SRR4302543.6514274/94‑1 (MQ=60)

                                                                  GTGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGC                              <  SRR4302543.1128448/94‑1 (MQ=60)

                                                                   TGTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCT                             >  SRR4302543.5167289/1‑94 (MQ=60)

                                                                    GTTGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTC                            >  SRR4302543.3716190/1‑94 (MQ=60)

                                                                      TGTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCAT                          >  SRR4302543.7698054/1‑94 (MQ=60)

                                                                       GTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATC                         >  SRR4302543.684643/1‑94 (MQ=60)

                                                                       GTTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATC                         >  SRR4302543.5453067/1‑94 (MQ=60)

                                                                        TTGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCT                        >  SRR4302543.6546554/1‑94 (MQ=60)

                                                                         TGCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTT                       >  SRR4302543.940524/1‑94 (MQ=60)

                                                                          GCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTT                      >  SRR4302543.1756385/1‑94 (MQ=60)

                                                                          GCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTT                      >  SRR4302543.4675967/1‑94 (MQ=60)

                                                                          GCCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTT                      >  SRR4302543.1196021/1‑94 (MQ=60)

                                                                           CCATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTT                     >  SRR4302543.4652448/1‑94 (MQ=60)

                                                                            CATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTA                    >  SRR4302543.962193/1‑94 (MQ=60)

                                                                            CATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTA                    >  SRR4302543.962195/1‑94 (MQ=60)

                                                                            CATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTA                    >  SRR4302543.4515480/1‑94 (MQ=60)

                                                                             ATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTAT                   >  SRR4302543.6574921/1‑94 (MQ=60)

                                                                             ATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTAT                   >  SRR4302543.3184132/1‑94 (MQ=60)

                                                                             ATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTAT                   <  SRR4302543.2876596/94‑1 (MQ=60)

                                                                             ATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTAT                   <  SRR4302543.6010338/94‑1 (MQ=60)

                                                                             ATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTAT                   >  SRR4302543.894761/1‑94 (MQ=60)

                                                                             ATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTAT                   <  SRR4302543.6010339/94‑1 (MQ=60)

                                                                             ATGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTAT                   >  SRR4302543.6042336/1‑94 (MQ=60)

                                                                              TGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCACTGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATG                  >  SRR4302543.648447/1‑94 (MQ=60)

                                                                              TGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATG                  <  SRR4302543.7913760/94‑1 (MQ=60)

                                                                              TGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATG                  <  SRR4302543.2871380/94‑1 (MQ=60)

                                                                              TGGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATG                  >  SRR4302543.648446/1‑94 (MQ=60)

                                                                               GGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCACCAAATCACATTGCCTGCATCGGCTCATCTTTTATGA                 >  SRR4302543.2709007/1‑94 (MQ=60)

                                                                               GGTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGC                 >  SRR4302543.7689566/1‑94 (MQ=60)

                                                                                GTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCA                >  SRR4302543.1873949/1‑94 (MQ=60)

                                                                                GTATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCA                <  SRR4302543.7643188/94‑1 (MQ=60)

                                                                                  ATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATATTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGT              <  SRR4302543.1133932/94‑1 (MQ=60)

                                                                                  ATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGT              <  SRR4302543.1133931/94‑1 (MQ=60)

                                                                                  ATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGT              >  SRR4302543.2073056/1‑94 (MQ=60)

                                                                                  ATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGT              >  SRR4302543.6887079/1‑94 (MQ=60)

                                                                                  ATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGT              >  SRR4302543.6463633/1‑94 (MQ=60)

                                                                                  ATTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGT              >  SRR4302543.530637/1‑94 (MQ=60)

                                                                                   TTCTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTC             <  SRR4302543.6917786/94‑1 (MQ=60)

                                                                                     CTCCGT‑ACCCTTATAAAAATTTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           <  SRR4302543.4362184/94‑1 (MQ=60)

                                                                                     CTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGGCTGAATCGGCTCATCTTTTATGGACTCCT           >  SRR4302543.563215/1‑94 (MQ=60)

                                                                                     CTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           <  SRR4302543.138569/94‑1 (MQ=60)

                                                                                     CTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           <  SRR4302543.549690/94‑1 (MQ=60)

                                                                                     CTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           >  SRR4302543.3436975/1‑94 (MQ=60)

                                                                                     CTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           <  SRR4302543.55434/94‑1 (MQ=60)

                                                                                     CTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           <  SRR4302543.7620233/94‑1 (MQ=60)

                                                                                     CTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           <  SRR4302543.7620232/94‑1 (MQ=60)

                                                                                     CTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           <  SRR4302543.921634/94‑1 (MQ=60)

                                                                                     CTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           <  SRR4302543.734730/94‑1 (MQ=60)

                                                                                     CTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           <  SRR4302543.94108/94‑1 (MQ=60)

                                                                                     CTCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCT           <  SRR4302543.6999201/94‑1 (MQ=60)

                                                                                      TCCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTG          <  SRR4302543.6027046/94‑1 (MQ=60)

                                                                                       CCGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGC         <  SRR4302543.2549593/94‑1 (MQ=60)

                                                                                        CGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCA        >  SRR4302543.6533544/1‑94 (MQ=60)

                                                                                        CGT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCA        <  SRR4302543.7969787/94‑1 (MQ=60)

                                                                                         GT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAG       <  SRR4302543.5492986/94‑1 (MQ=60)

                                                                                         GT‑ACCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAG       >  SRR4302543.2871360/1‑94 (MQ=60)

                                                                                          T‑C‑CCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAA     <  SRR4302543.6781144/94‑1 (MQ=60)

                                                                                           tacCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGA      >  SRR4302543.1166658/4‑94 (MQ=60)

                                                                                           tacCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGA      >  SRR4302543.5168980/4‑94 (MQ=60)

                                                                                           tacCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGA      >  SRR4302543.5168979/4‑94 (MQ=60)

                                                                                           tacCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGA      >  SRR4302543.3603970/4‑94 (MQ=60)

                                                                                            acCCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAA     >  SRR4302543.5196753/3‑94 (MQ=60)

                                                                                            C‑CCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAAT    <  SRR4302543.7890732/94‑1 (MQ=60)

                                                                                            C‑CCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAAT    <  SRR4302543.2500217/94‑1 (MQ=60)

                                                                                            C‑CCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAAT    >  SRR4302543.4544068/1‑94 (MQ=60)

                                                                                              CCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATG   >  SRR4302543.5592033/1‑94 (MQ=60)

                                                                                              CCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATG   >  SRR4302543.4006394/1‑94 (MQ=60)

                                                                                              CCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATG   <  SRR4302543.4977674/94‑1 (MQ=60)

                                                                                               CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATGA  >  SRR4302543.6792760/1‑94 (MQ=60)

                                                                                               CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATGA  >  SRR4302543.4163673/1‑94 (MQ=60)

                                                                                               CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATGA  <  SRR4302543.6877475/94‑1 (MQ=60)

                                                                                               CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATGA  >  SRR4302543.4644852/1‑94 (MQ=60)

                                                                                               CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATGA  >  SRR4302543.944306/1‑94 (MQ=60)

                                                                                               CTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATGA  >  SRR4302543.5114107/1‑94 (MQ=60)

CGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGC‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGT‑A‑CCTTATAAAAATGTTGCGCAATGTTAACTATAGTCAGCATGCAACAAATCACATTGCCTGAATCGGCTCATCTTTTATGCAGTCCTGCAGAATGA  >  NC_000913/4013680‑4013865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`