Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,017,557 A→G E116G (GAG→GGG)  yigP → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,017,5570AG99.7% 1183.1 / ‑6.2 380E116G (GAG→GGG) yigPhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (196/183);  minor base C (1/0);  total (197/183)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 390 total aligned reads displayed.

AGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGAGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGC  >  NC_000913/4017467‑4017649
                                                                                          |                                                                                             
agcTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGt                                                                                             <  2:1979727/93‑1 (MQ=255)
agcTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGt                                                                                             <  2:286539/93‑1 (MQ=255)
 gcTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGtt                                                                                            >  2:4231880/1‑93 (MQ=255)
  cTTACCGCACTGATTCGCAGGGGTGAGCTGGAAGTGCAGTGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTc                                                                                           >  1:2022181/1‑93 (MQ=255)
    tACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGa                                                                                         <  1:3489931/93‑1 (MQ=255)
    tACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGa                                                                                         <  1:1896394/93‑1 (MQ=255)
      ccGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAcc                                                                                       <  2:3362528/93‑1 (MQ=255)
       cGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAccc                                                                                      >  2:4029382/1‑93 (MQ=255)
        gCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCt                                                                                     >  2:867875/1‑93 (MQ=255)
          aCTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGc                                                                                   <  2:6953283/93‑1 (MQ=255)
          aCTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGc                                                                                   <  2:7628554/93‑1 (MQ=255)
             gATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGa                                                                                >  1:624335/1‑93 (MQ=255)
              aTTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCGGGGTTCGACCCTGCGGaa                                                                               >  1:5322558/1‑93 (MQ=255)
              aTTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGaa                                                                               >  1:1334123/1‑93 (MQ=255)
              aTTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGaa                                                                               <  1:2984442/93‑1 (MQ=255)
               ttCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGCAc                                                                              >  2:6653970/1‑93 (MQ=255)
               ttCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAc                                                                              <  2:6541695/93‑1 (MQ=255)
               ttCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAc                                                                              >  1:1086791/1‑93 (MQ=255)
                   cAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAActgct                                                                          <  2:133579/93‑1 (MQ=255)
                   cAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAActgct                                                                          <  1:5801862/93‑1 (MQ=255)
                     gtggtgAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTgg                                                                        <  2:1048241/93‑1 (MQ=255)
                     gtggtgAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTgg                                                                        >  1:7292921/1‑93 (MQ=255)
                      tggtgAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGc                                                                       >  1:1213055/1‑93 (MQ=255)
                       ggtgAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGcc                                                                      >  1:4082509/1‑93 (MQ=255)
                           aGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCtt                                                                 <  1:465092/93‑1 (MQ=255)
                            gCTGGAGGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTta                                                                <  1:321098/93‑1 (MQ=255)
                            gCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTta                                                                >  1:7249323/1‑93 (MQ=255)
                            gCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTta                                                                <  1:1637271/93‑1 (MQ=255)
                             cTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTtat                                                               <  2:7482596/93‑1 (MQ=255)
                              tGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGGACTGCTGGCCCCTtata                                                              <  1:5700902/93‑1 (MQ=255)
                               ggAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATAc                                                             <  2:3774433/93‑1 (MQ=255)
                               ggAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATAc                                                             <  2:4718743/93‑1 (MQ=255)
                               ggAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATAc                                                             <  1:7882166/93‑1 (MQ=255)
                               ggAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATAc                                                             <  1:3576801/93‑1 (MQ=255)
                                gAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGTCCCCTTATAcc                                                            >  1:4582634/1‑93 (MQ=255)
                                  aGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCgg                                                          <  2:7302263/93‑1 (MQ=255)
                                   gTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCggg                                                         >  1:5645902/1‑92 (MQ=255)
                                   gTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGt                                                         >  1:6666390/1‑93 (MQ=255)
                                    tGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTg                                                        >  2:3319716/1‑93 (MQ=255)
                                      cAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGat                                                      >  2:260823/1‑93 (MQ=255)
                                      cAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGat                                                      <  2:5665079/93‑1 (MQ=255)
                                       aGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGata                                                     >  1:5447797/1‑93 (MQ=255)
                                       aGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGata                                                     <  2:593137/93‑1 (MQ=255)
                                       aGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGata                                                     <  1:3799986/93‑1 (MQ=255)
                                       aGGGCGATATTCAGGTGGTACAATACTTCGTTGCGCTCGGAGATCTGGCAGGGGTCGACCCTGCGGAACTGCTTGCCCCTTATACCGGTGata                                                     >  2:2917099/1‑93 (MQ=255)
                                        gggCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGatat                                                    <  1:744972/93‑1 (MQ=255)
                                        gggCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGatat                                                    >  2:5996588/1‑93 (MQ=255)
                                        gggCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGatat                                                    >  1:5400968/1‑93 (MQ=255)
                                        gggCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGatat                                                    <  1:5015430/93‑1 (MQ=255)
                                            gATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATcgcc                                                >  2:2319938/1‑93 (MQ=255)
                                            gATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATcgcc                                                >  1:4032684/1‑93 (MQ=255)
                                            gATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATcgcc                                                >  1:3936084/1‑93 (MQ=255)
                                              tatTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATcgccgc                                              <  1:3693855/93‑1 (MQ=255)
                                               atTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCt                                             >  1:2439715/1‑93 (MQ=255)
                                               atTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCt                                             <  1:2164330/93‑1 (MQ=255)
                                                ttCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTTATACCGGTGATATcgccgcg                                             >  2:7846654/1‑92 (MQ=255)
                                                 tCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGa                                           >  2:5358450/1‑93 (MQ=255)
                                                 tCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGa                                           <  2:1649984/93‑1 (MQ=255)
                                                 tCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGa                                           <  1:5835613/93‑1 (MQ=255)
                                                   aGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAg                                         >  2:1217128/1‑93 (MQ=255)
                                                   aGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAg                                         <  1:810882/93‑1 (MQ=255)
                                                       ggtgCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAAt                                     <  1:7627674/93‑1 (MQ=255)
                                                       ggtgCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAAt                                     >  2:4375162/1‑93 (MQ=255)
                                                         tgCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCa                                   <  1:1492511/93‑1 (MQ=255)
                                                         tgCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCa                                   >  1:2304731/1‑93 (MQ=255)
                                                         tgCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCa                                   <  1:6886964/93‑1 (MQ=255)
                                                          gCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAg                                  >  2:5831925/1‑93 (MQ=255)
                                                           cAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGc                                 >  1:6192545/1‑93 (MQ=255)
                                                            aaaaCTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCa                                >  1:4803793/1‑93 (MQ=255)
                                                            aaaaCTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCa                                <  2:5419892/93‑1 (MQ=255)
                                                               aCTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAg                             <  1:1012304/93‑1 (MQ=255)
                                                               aCTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAg                             >  1:4932586/1‑93 (MQ=255)
                                                                cTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGc                            >  2:1487189/1‑93 (MQ=255)
                                                                cTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGc                            >  2:1821731/1‑93 (MQ=255)
                                                                cTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGc                            <  1:5171804/93‑1 (MQ=255)
                                                                cTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGc                            >  2:503701/1‑93 (MQ=255)
                                                                cTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGc                            >  1:6408272/1‑93 (MQ=255)
                                                                   cGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCAt                         <  2:2206033/93‑1 (MQ=255)
                                                                    gTTGCGCTGGCAGATCTGGTAGGGTTCGACCCCGCGGAACTGCTGGCTCCTTATACCGGTGATATCGCTGCTGTATGAATCAGCAAAGCCATg                        >  1:7033936/1‑93 (MQ=255)
                                                                    gTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATg                        <  1:5971647/93‑1 (MQ=255)
                                                                       gcgcTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATgcgc                     <  1:3247180/93‑1 (MQ=255)
                                                                         gcTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCCAAGCCATGCGCgg                   >  2:5518588/1‑93 (MQ=255)
                                                                         gcTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCgg                   >  1:6822277/1‑93 (MQ=255)
                                                                         gcTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCgg                   >  1:7752019/1‑93 (MQ=255)
                                                                          cTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGa                  <  2:6716428/93‑1 (MQ=255)
                                                                            ggCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCCGCAAAGCCATGCGCGGAgg                <  1:3103932/93‑1 (MQ=255)
                                                                            ggCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAgg                >  2:754105/1‑93 (MQ=255)
                                                                            ggCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAgg                <  2:3609721/93‑1 (MQ=255)
                                                                             gCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGgc               <  2:4936693/93‑1 (MQ=255)
                                                                                 aTCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCaa           >  1:6503915/1‑93 (MQ=255)
                                                                                 aTCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCaa           >  2:4634168/1‑93 (MQ=255)
                                                                                 aTCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCaa           >  1:451412/1‑93 (MQ=255)
                                                                                   cTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAATGAATCAGCAAAGCCATGCGCGGAGGCGCAAAg         <  2:7725045/93‑1 (MQ=255)
                                                                                    tGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGt        >  2:3179925/1‑93 (MQ=255)
                                                                                    tGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGt        <  1:4238133/93‑1 (MQ=255)
                                                                                     ggCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGtt       <  2:2453041/93‑1 (MQ=255)
                                                                                     ggCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGtt       <  2:6237929/93‑1 (MQ=255)
                                                                                      gCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGGGGCGCAAAGTTc      >  1:2681759/1‑93 (MQ=255)
                                                                                       cAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTcc     <  1:286940/93‑1 (MQ=255)
                                                                                          agTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGc  <  2:6458866/93‑1 (MQ=255)
                                                                                          |                                                                                             
AGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGAGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGC  >  NC_000913/4017467‑4017649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 233 total aligned reads displayed.
AGCAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGAGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGCA  >  NC_000913/4017464‑4017650
                                                                                             |                                                                                             
AGCAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGTCAGATCTGGCAGG                                                                                               >  SRR4302543.7929010/1‑94 (MQ=60)
AGCAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGG                                                                                               <  SRR4302543.2098159/94‑1 (MQ=60)
AGCAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGG                                                                                               >  SRR4302543.6669882/1‑94 (MQ=60)
AGCAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGG                                                                                               >  SRR4302543.2239080/1‑94 (MQ=60)
 GCAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGG                                                                                              <  SRR4302543.389974/94‑1 (MQ=60)
  CAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGT                                                                                             <  SRR4302543.7240790/94‑1 (MQ=60)
  CAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGT                                                                                             <  SRR4302543.6219375/94‑1 (MQ=60)
  CAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGT                                                                                             >  SRR4302543.6202020/1‑94 (MQ=60)
   AGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTT                                                                                            <  SRR4302543.2300382/94‑1 (MQ=60)
    GCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTC                                                                                           >  SRR4302543.69229/1‑94 (MQ=60)
     CTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCG                                                                                          >  SRR4302543.4709750/1‑94 (MQ=60)
     CTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCG                                                                                          >  SRR4302543.3007126/1‑94 (MQ=60)
      TTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGA                                                                                         <  SRR4302543.3567167/94‑1 (MQ=60)
      TTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGA                                                                                         <  SRR4302543.72793/94‑1 (MQ=60)
       TACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAC                                                                                        <  SRR4302543.1913455/94‑1 (MQ=60)
       TACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAC                                                                                        <  SRR4302543.6994470/94‑1 (MQ=60)
       TACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAC                                                                                        <  SRR4302543.5901122/94‑1 (MQ=60)
       TACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAC                                                                                        >  SRR4302543.3788194/1‑94 (MQ=60)
       TACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAC                                                                                        >  SRR4302543.3788195/1‑94 (MQ=60)
       TACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGAC                                                                                        <  SRR4302543.4111487/94‑1 (MQ=60)
        ACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACC                                                                                       <  SRR4302543.7414690/94‑1 (MQ=60)
        ACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACC                                                                                       >  SRR4302543.4669665/1‑94 (MQ=60)
        ACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACC                                                                                       <  SRR4302543.4645686/94‑1 (MQ=60)
         CCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCC                                                                                      >  SRR4302543.5794542/1‑94 (MQ=60)
          CGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCT                                                                                     >  SRR4302543.3688281/1‑94 (MQ=60)
            CACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGC                                                                                   <  SRR4302543.7360728/94‑1 (MQ=60)
            CACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGC                                                                                   <  SRR4302543.5536136/94‑1 (MQ=60)
             ACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCG                                                                                  <  SRR4302543.6552207/94‑1 (MQ=60)
              CTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGG                                                                                 >  SRR4302543.1062105/1‑94 (MQ=60)
              CTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGG                                                                                 >  SRR4302543.7869830/1‑94 (MQ=60)
               TGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGA                                                                                >  SRR4302543.1993980/1‑94 (MQ=60)
               TGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGA                                                                                >  SRR4302543.630050/1‑94 (MQ=60)
                GATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCGGGGTTCGACCCTGCGGAA                                                                               >  SRR4302543.5370677/1‑94 (MQ=60)
                GATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAA                                                                               >  SRR4302543.1346012/1‑94 (MQ=60)
                 ATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAT                                                                              >  SRR4302543.1096556/1‑94 (MQ=60)
                 ATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAC                                                                              <  SRR4302543.3011542/94‑1 (MQ=60)
                 ATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAC                                                                              >  SRR4302543.2332852/1‑94 (MQ=60)
                 ATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAC                                                                              >  SRR4302543.1096557/1‑94 (MQ=60)
                 ATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAAC                                                                              >  SRR4302543.2550861/1‑94 (MQ=60)
                  TTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACT                                                                             <  SRR4302543.7945747/94‑1 (MQ=60)
                  TTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACT                                                                             <  SRR4302543.4551893/94‑1 (MQ=60)
                  ATCGCAGTGGTGAGCTGGAAGTGCAGGGCGATAGTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACT                                                                             <  SRR4302543.5335039/94‑1 (MQ=60)
                   TCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTG                                                                            <  SRR4302543.5081616/94‑1 (MQ=60)
                   TCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTG                                                                            <  SRR4302543.3376199/94‑1 (MQ=60)
                    CGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGC                                                                           >  SRR4302543.3251106/1‑94 (MQ=60)
                    CGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGC                                                                           <  SRR4302543.1637662/94‑1 (MQ=60)
                    CGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGC                                                                           >  SRR4302543.5889340/1‑94 (MQ=60)
                      CAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTG                                                                         >  SRR4302543.4054697/1‑94 (MQ=60)
                      CAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTG                                                                         <  SRR4302543.5854631/94‑1 (MQ=60)
                       AGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGG                                                                        >  SRR4302543.7363303/1‑94 (MQ=60)
                        GTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGC                                                                       >  SRR4302543.4598099/1‑94 (MQ=60)
                        GTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGC                                                                       >  SRR4302543.119236/1‑94 (MQ=60)
                        GTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGC                                                                       <  SRR4302543.1984474/94‑1 (MQ=60)
                        GTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGC                                                                       >  SRR4302543.1235373/1‑94 (MQ=60)
                         TGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCC                                                                      >  SRR4302543.4119108/1‑94 (MQ=60)
                          GGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCC                                                                     <  SRR4302543.7146464/94‑1 (MQ=60)
                           GTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCC                                                                    >  SRR4302543.402765/1‑94 (MQ=60)
                           GTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCC                                                                    >  SRR4302543.7659720/1‑94 (MQ=60)
                            TGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCT                                                                   <  SRR4302543.4801006/94‑1 (MQ=60)
                            TGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCT                                                                   >  SRR4302543.5374700/1‑94 (MQ=60)
                              AGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTA                                                                 <  SRR4302543.469421/94‑1 (MQ=60)
                              AGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTA                                                                 >  SRR4302543.7319440/1‑94 (MQ=60)
                               GCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTAT                                                                <  SRR4302543.1651879/94‑1 (MQ=60)
                               GCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTAT                                                                <  SRR4302543.7997855/94‑1 (MQ=60)
                               GCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTAT                                                                <  SRR4302543.7262236/94‑1 (MQ=60)
                               GCGGGAGGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTAT                                                                <  SRR4302543.324004/94‑1 (MQ=60)
                                CTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATA                                                               >  SRR4302543.894550/1‑94 (MQ=60)
                                CTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATA                                                               <  SRR4302543.4233827/94‑1 (MQ=60)
                                 gtGAAGTGCAGGGGGGTATTTAGGTGGTGGAAAAGTTCGTTGCGCTGGCAGATCTGGCAGGGTTAGACCCTGCGGAACTGCTGGCCCCTTATAC                                                              <  SRR4302543.5752900/92‑1 (MQ=60)
                                 TGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGGACTGCTGGCCCCTTATAC                                                              <  SRR4302543.5752901/94‑1 (MQ=60)
                                 TGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATAC                                                              <  SRR4302543.1319863/94‑1 (MQ=60)
                                 CGGAAGTGCAGGGGGATATTCAGGTGGTGCAAAACTTCGTTGTGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATAC                                                              <  SRR4302543.2727865/94‑1 (MQ=60)
                                  GGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGTCCCCTTATACC                                                             >  SRR4302543.4624276/1‑94 (MQ=60)
                                  GGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACC                                                             <  SRR4302543.7956338/94‑1 (MQ=60)
                                  GGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACC                                                             <  SRR4302543.3608407/94‑1 (MQ=60)
                                     AGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGT                                                          >  SRR4302543.5419049/1‑94 (MQ=60)
                                     AGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGT                                                          >  SRR4302543.3960253/1‑94 (MQ=60)
                                     AGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGT                                                          >  SRR4302543.6729323/1‑94 (MQ=60)
                                     AGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGG                                                          >  SRR4302543.5697370/1‑94 (MQ=60)
                                     AGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGG                                                          >  SRR4302543.5697372/1‑94 (MQ=60)
                                      GTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTG                                                         >  SRR4302543.4283530/1‑94 (MQ=60)
                                      GTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTG                                                         <  SRR4302543.97716/94‑1 (MQ=60)
                                      GTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTG                                                         >  SRR4302543.7329441/1‑94 (MQ=60)
                                         CAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATA                                                      <  SRR4302543.6504051/94‑1 (MQ=60)
                                         CAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATA                                                      >  SRR4302543.5497224/1‑94 (MQ=60)
                                          AGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATAT                                                     <  SRR4302543.5536834/94‑1 (MQ=60)
                                          AGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATAT                                                     <  SRR4302543.3833467/94‑1 (MQ=60)
                                          AGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATAT                                                     >  SRR4302543.7724313/1‑94 (MQ=60)
                                           GGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATC                                                    <  SRR4302543.5061063/94‑1 (MQ=60)
                                           GGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATC                                                    <  SRR4302543.751599/94‑1 (MQ=60)
                                              GGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCC                                                 <  SRR4302543.2336874/94‑1 (MQ=60)
                                              CGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCC                                                 >  SRR4302543.3970864/1‑94 (MQ=60)
                                              CGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCC                                                 >  SRR4302543.4068747/1‑94 (MQ=60)
                                              CGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCC                                                 >  SRR4302543.5039119/1‑94 (MQ=60)
                                               GATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCG                                                >  SRR4302543.4944009/1‑94 (MQ=60)
                                                ATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCGGC                                               >  SRR4302543.6360243/1‑94 (MQ=60)
                                                ATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGC                                               >  SRR4302543.7482062/1‑94 (MQ=60)
                                                ATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGC                                               >  SRR4302543.6751430/1‑94 (MQ=60)
                                                ATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGCAACTGCTGGCCCCTTATACCGGTGATATCGCCGC                                               >  SRR4302543.4877212/1‑94 (MQ=60)
                                                 TATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCT                                              <  SRR4302543.1393700/94‑1 (MQ=60)
                                                 TATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCT                                              <  SRR4302543.3726330/94‑1 (MQ=60)
                                                 TATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCT                                              <  SRR4302543.1811152/94‑1 (MQ=60)
                                                 TATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCT                                              <  SRR4302543.3194242/94‑1 (MQ=60)
                                                 TATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCT                                              <  SRR4302543.6564695/94‑1 (MQ=60)
                                                  ATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTG                                             >  SRR4302543.6277947/1‑94 (MQ=60)
                                                  ATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTG                                             >  SRR4302543.5849766/1‑94 (MQ=60)
                                                  ATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTG                                             <  SRR4302543.2183724/94‑1 (MQ=60)
                                                  ATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTG                                             >  SRR4302543.1938592/1‑94 (MQ=60)
                                                   TTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGA                                            <  SRR4302543.1289163/94‑1 (MQ=60)
                                                    TCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAA                                           <  SRR4302543.5888687/94‑1 (MQ=60)
                                                     CAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAG                                          >  SRR4302543.5946714/1‑94 (MQ=60)
                                                      AGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGG                                         <  SRR4302543.818024/94‑1 (MQ=60)
                                                        GTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAA                                       >  SRR4302543.2958266/1‑94 (MQ=60)
                                                        GTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAA                                       <  SRR4302543.61184/94‑1 (MQ=60)
                                                          GGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATC                                     <  SRR4302543.7700064/94‑1 (MQ=60)
                                                           GTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCA                                    >  SRR4302543.2325725/1‑94 (MQ=60)
                                                           GTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCA                                    <  SRR4302543.2708724/94‑1 (MQ=60)
                                                           GTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCA                                    <  SRR4302543.2172814/94‑1 (MQ=60)
                                                           GTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCA                                    >  SRR4302543.5060404/1‑94 (MQ=60)
                                                            TGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAG                                   <  SRR4302543.1505940/94‑1 (MQ=60)
                                                            TGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAG                                   <  SRR4302543.6951738/94‑1 (MQ=60)
                                                            TGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAG                                   <  SRR4302543.3165177/94‑1 (MQ=60)
                                                             GCAAAACTTCGTTGGGCTGGCAGATCTGGCAGGGTTCGCCCCTGCCGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGC                                  <  SRR4302543.422251/94‑1 (MQ=60)
                                                             GCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGC                                  >  SRR4302543.6251050/1‑94 (MQ=60)
                                                             GCAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGC                                  <  SRR4302543.422250/94‑1 (MQ=60)
                                                              CAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCA                                 >  SRR4302543.4847686/1‑94 (MQ=60)
                                                              CAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCA                                 >  SRR4302543.5353530/1‑94 (MQ=60)
                                                              CAAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGACCCTTATACCGGTGATGTCGCCGCTGAAGGAATCAGCA                                 >  SRR4302543.4107854/1‑94 (MQ=60)
                                                              CAAAACTTCGTTGCGCTGGCAGATCTGGCACGCGTCGACCCTGCGGAACTGCTGGCCGCTTATACCGGGGATATCGCCCCTGAACGAAGCAGCA                                 >  SRR4302543.5782606/1‑94 (MQ=53)
                                                               AAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAA                                >  SRR4302543.5177549/1‑94 (MQ=60)
                                                               AAAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAA                                <  SRR4302543.6386725/94‑1 (MQ=60)
                                                                AAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAA                               >  SRR4302543.3138618/1‑94 (MQ=60)
                                                                AAACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAA                               <  SRR4302543.3653999/94‑1 (MQ=60)
                                                                 AACTTCGTTGCGCTGGCAGATCTGGCGGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAG                              >  SRR4302543.3731688/1‑94 (MQ=60)
                                                                 AACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAG                              >  SRR4302543.4977513/1‑94 (MQ=60)
                                                                 AACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACACTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAG                              <  SRR4302543.5759479/94‑1 (MQ=60)
                                                                  ACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGC                             <  SRR4302543.1021259/94‑1 (MQ=60)
                                                                  ACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGC                             >  SRR4302543.6468625/1‑94 (MQ=60)
                                                                  ACTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGC                             <  SRR4302543.5732828/94‑1 (MQ=60)
                                                                   CTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCC                            <  SRR4302543.5218512/94‑1 (MQ=60)
                                                                   CTTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCC                            >  SRR4302543.4398844/1‑94 (MQ=60)
                                                                    TTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCA                           <  SRR4302543.7943808/94‑1 (MQ=60)
                                                                    TTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCA                           <  SRR4302543.4607431/94‑1 (MQ=60)
                                                                    TTCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGATAGCCCCTTATCCCGGTGATATCGCCGCTGAAGGAATCAGAAAAGCCA                           >  SRR4302543.901590/1‑94 (MQ=60)
                                                                     TCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCAT                          <  SRR4302543.8006794/94‑1 (MQ=60)
                                                                     TCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCAT                          <  SRR4302543.216983/94‑1 (MQ=60)
                                                                     TCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCAT                          <  SRR4302543.5491028/94‑1 (MQ=60)
                                                                     TCGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCAT                          >  SRR4302543.5857516/1‑94 (MQ=60)
                                                                     TCGTGGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCAT                          <  SRR4302543.5491027/94‑1 (MQ=60)
                                                                      CGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATG                         <  SRR4302543.4624691/94‑1 (MQ=60)
                                                                      CGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATG                         >  SRR4302543.6613550/1‑94 (MQ=60)
                                                                      CGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATG                         <  SRR4302543.4863067/94‑1 (MQ=60)
                                                                      CGTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATG                         <  SRR4302543.351314/94‑1 (MQ=60)
                                                                       GTTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGC                        <  SRR4302543.6026340/94‑1 (MQ=60)
                                                                        TTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCG                       <  SRR4302543.2966220/94‑1 (MQ=60)
                                                                        TTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCG                       >  SRR4302543.6972124/1‑94 (MQ=60)
                                                                        TTGCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCG                       <  SRR4302543.4026426/94‑1 (MQ=60)
                                                                          GCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCG                     <  SRR4302543.3276538/94‑1 (MQ=60)
                                                                          GCGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCG                     <  SRR4302543.5410605/94‑1 (MQ=60)
                                                                           CGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGG                    >  SRR4302543.1781622/1‑94 (MQ=60)
                                                                           CGCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGG                    >  SRR4302543.6886684/1‑94 (MQ=60)
                                                                            GCTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGA                   >  SRR4302543.3024924/1‑94 (MQ=60)
                                                                             CTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAG                  <  SRR4302543.6950478/94‑1 (MQ=60)
                                                                             CTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAG                  >  SRR4302543.2209782/1‑94 (MQ=60)
                                                                             CTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAG                  >  SRR4302543.6378177/1‑94 (MQ=60)
                                                                             CTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAG                  <  SRR4302543.5487062/94‑1 (MQ=60)
                                                                             CTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGACATGCCCGGAG                  >  SRR4302543.1416207/1‑94 (MQ=60)
                                                                             CTGGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGCCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAG                  >  SRR4302543.2438/1‑94 (MQ=60)
                                                                               GGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCCGCAAAGCCATGCGCGGAGGC                <  SRR4302543.3131850/94‑1 (MQ=60)
                                                                               GGCAGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGC                <  SRR4302543.6791204/94‑1 (MQ=60)
                                                                                  AGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCA             >  SRR4302543.3254413/1‑94 (MQ=60)
                                                                                  AGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCA             >  SRR4302543.7787344/1‑94 (MQ=60)
                                                                                  AGATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCA             >  SRR4302543.6071422/1‑94 (MQ=60)
                                                                                   GATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCCTGCGCGGAGGCGCAA            >  SRR4302543.3599628/1‑94 (MQ=60)
                                                                                   GATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAA            >  SRR4302543.1640963/1‑94 (MQ=60)
                                                                                   GATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAA            >  SRR4302543.1640964/1‑94 (MQ=60)
                                                                                   GATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAA            >  SRR4302543.6565181/1‑94 (MQ=60)
                                                                                   GATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAA            >  SRR4302543.455626/1‑94 (MQ=60)
                                                                                   GATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAA            >  SRR4302543.5865341/1‑94 (MQ=60)
                                                                                    ATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAA           >  SRR4302543.7491163/1‑94 (MQ=60)
                                                                                    ATCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAA           >  SRR4302543.6994865/1‑94 (MQ=60)
                                                                                     TCTGGCAGGGTTCGACCCTGCGGAACTGCTGTCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAG          <  SRR4302543.7681391/94‑1 (MQ=60)
                                                                                     TCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAG          <  SRR4302543.1142044/94‑1 (MQ=60)
                                                                                     TCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAG          <  SRR4302543.6797761/94‑1 (MQ=60)
                                                                                     TCTGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAG          >  SRR4302543.2564376/1‑94 (MQ=60)
                                                                                       TGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTT        <  SRR4302543.3490443/94‑1 (MQ=60)
                                                                                       TGGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTT        >  SRR4302543.3568689/1‑94 (MQ=60)
                                                                                        GGCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGGGGCGCAAAGTTC       >  SRR4302543.2706061/1‑94 (MQ=60)
                                                                                         GCAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCC      <  SRR4302543.1186574/94‑1 (MQ=60)
                                                                                          CAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCT     <  SRR4302543.3090913/94‑1 (MQ=60)
                                                                                          CAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCT     <  SRR4302543.7790769/94‑1 (MQ=60)
                                                                                          CAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCT     >  SRR4302543.481844/1‑94 (MQ=60)
                                                                                          CAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCT     >  SRR4302543.5930223/1‑94 (MQ=60)
                                                                                          CAGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCT     <  SRR4302543.289495/94‑1 (MQ=60)
                                                                                           AGGGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTG    >  SRR4302543.6362584/1‑94 (MQ=60)
                                                                                             GGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGCA  >  SRR4302543.2086024/1‑94 (MQ=60)
                                                                                             GGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGCA  >  SRR4302543.696523/1‑94 (MQ=60)
                                                                                             GGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGCA  <  SRR4302543.7905004/94‑1 (MQ=60)
                                                                                             GGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGCA  <  SRR4302543.1652300/94‑1 (MQ=60)
                                                                                             GGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGCA  >  SRR4302543.2599790/1‑94 (MQ=60)
                                                                                             |                                                                                             
AGCAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGAGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGCA  >  NC_000913/4017464‑4017650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: