Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,031,984 +C coding (1250/1299 nt) trkH → TrkH

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,031,9831.C100.0% 989.5 / NA 317A417P (GCA→CCA) trkHTrkH
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (160/157);  total (160/157)

Only 100 of 339 total aligned reads displayed.

TCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑CACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAA  >  NC_000913/4031892‑4032070
                                                                                             |                                                                                       
tCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑c                                                                                        >  1:4475140/1‑93 (MQ=255)
tCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑c                                                                                        >  2:1880145/1‑93 (MQ=255)
tCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑c                                                                                        <  1:3526256/93‑1 (MQ=255)
 cgcgCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑cc                                                                                       <  1:5737952/93‑2 (MQ=255)
  gcgcACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑cca                                                                                      <  1:1905090/93‑3 (MQ=255)
  gcgcACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑cca                                                                                      >  1:2311836/1‑91 (MQ=255)
  gcgcACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑cca                                                                                      >  1:3936105/1‑91 (MQ=255)
   cgcACTCCCGGAACGTATCCTCGAAGCCGTTTGGGGCTTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑ccac                                                                                     <  2:1364957/93‑4 (MQ=255)
       cTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGc                                                                                  >  1:592130/1‑93 (MQ=255)
       cTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGc                                                                                  <  1:5111727/93‑1 (MQ=255)
        tGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTTTCTC‑CACGGGCg                                                                                 >  2:3234238/1‑93 (MQ=255)
        tGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCg                                                                                 <  1:99267/93‑1 (MQ=255)
            ggAACGTATCCTCGAAGCCGTTTGGGTATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGa                                                                             <  2:1216978/93‑1 (MQ=255)
             gAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGAt                                                                            <  1:3244362/93‑1 (MQ=255)
             gAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGAt                                                                            >  2:2241820/1‑93 (MQ=255)
             gAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGAt                                                                            >  1:5404880/1‑93 (MQ=255)
              accGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATg                                                                           <  2:2119998/91‑1 (MQ=255)
              aaCGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATg                                                                           >  1:809238/1‑93 (MQ=255)
              aaCGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATg                                                                           >  1:4828063/1‑93 (MQ=255)
               aCGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGa                                                                          <  2:2873440/93‑1 (MQ=255)
                cGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGAc                                                                         <  2:3504980/93‑1 (MQ=255)
                 gTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGG‑CACGGGCGGGGTTTACt                                                                        >  1:5784297/1‑93 (MQ=255)
                  tATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACtt                                                                       <  2:1559916/93‑1 (MQ=255)
                  tATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACtt                                                                       >  1:1403560/1‑93 (MQ=255)
                   aTCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACttt                                                                      >  2:300305/1‑93 (MQ=255)
                     ccTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTc                                                                    <  2:676941/93‑1 (MQ=255)
                        cGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGc                                                                 <  1:4405541/93‑1 (MQ=255)
                        cGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGc                                                                 <  2:7161223/93‑1 (MQ=255)
                           aGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCtt                                                              >  1:6530780/1‑93 (MQ=255)
                           aGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCtt                                                              >  1:6464916/1‑93 (MQ=255)
                            gCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCttt                                                             <  1:3819657/93‑1 (MQ=255)
                            gCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCttt                                                             >  1:2120643/1‑93 (MQ=255)
                            gCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCttt                                                             >  2:80096/1‑93 (MQ=255)
                              cGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGc                                                           <  2:1982918/93‑1 (MQ=255)
                              cGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGc                                                           >  1:677446/1‑93 (MQ=255)
                                tttGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGt                                                         >  1:913254/1‑93 (MQ=255)
                                tttGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGACAGTATGCTGGCGATTATC‑GCCAGGGGCGTGGATGGCTTTTCTGCCTTTGCGt                                                         <  2:3996695/93‑1 (MQ=255)
                                 ttGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTc                                                        >  1:3689988/1‑93 (MQ=255)
                                    gggATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGgt                                                     <  2:7665837/93‑1 (MQ=255)
                                       aTTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGgttgt                                                  <  2:7392690/93‑1 (MQ=255)
                                       aTTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGgttgt                                                  <  1:3147618/93‑1 (MQ=255)
                                        attttCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGgttgtt                                                 >  1:2225662/2‑93 (MQ=255)
                                         ttttCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGttgttg                                                <  1:7250906/93‑1 (MQ=255)
                                          tttCTCCCCCTATGCATGGGTGTTTATTGGCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATTACTTTTCTGCCTTTGCGTCGGTTGTTGc                                               <  1:1826874/93‑1 (MQ=255)
                                            tctcCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGa                                             >  2:5069144/1‑93 (MQ=255)
                                              cccGCTTATGTATTGGTTTTTATTGTAAGTAGGCGGGGGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACa                                           <  2:7874092/92‑1 (MQ=255)
                                                 gCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTg                                        >  1:5294061/1‑93 (MQ=255)
                                                 gCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTg                                        <  2:7538209/93‑1 (MQ=255)
                                                 gCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTg                                        <  2:6617885/93‑1 (MQ=255)
                                                  ccTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTCTC‑GCCACGGGCGCGGATTCCGTTTTGGCCTTTGCGTGGGTTGGTTGGACATTGa                                       >  1:379865/1‑93 (MQ=255)
                                                  ccTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGa                                       <  1:3005958/93‑1 (MQ=255)
                                                   cTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGaa                                      >  2:5009639/1‑93 (MQ=255)
                                                    tATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAAt                                     <  1:2866385/93‑1 (MQ=255)
                                                    tATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAAt                                     >  1:459656/1‑93 (MQ=255)
                                                    tATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAAt                                     >  2:5982188/1‑93 (MQ=255)
                                                     aTGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATa                                    >  2:1115277/1‑93 (MQ=255)
                                                     aTGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATa                                    >  2:4648668/1‑93 (MQ=255)
                                                     aTGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATa                                    >  1:4233545/1‑93 (MQ=255)
                                                      tGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATaa                                   <  1:2917797/93‑1 (MQ=255)
                                                      tGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATaa                                   >  2:2649933/1‑93 (MQ=255)
                                                      tGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATaa                                   <  2:13/93‑1 (MQ=255)
                                                       gCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAAc                                  <  1:5460365/93‑1 (MQ=255)
                                                       gCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAAc                                  <  1:6009324/93‑1 (MQ=255)
                                                       gCATTGGTGTTTAATGTCAGTATGATGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAAc                                  <  1:6997583/93‑1 (MQ=255)
                                                       gCATTGGCGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGAGTCGCTTGTTGCGACATTGAATTAc                                  >  2:3185674/1‑93 (MQ=255)
                                                        cATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAAcc                                 >  1:7799470/1‑93 (MQ=255)
                                                         aTTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCt                                <  1:617699/93‑1 (MQ=255)
                                                         aTTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCt                                >  2:3666727/1‑93 (MQ=255)
                                                          ttGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTg                               <  1:1287520/93‑1 (MQ=255)
                                                          ttGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTg                               <  1:2032744/93‑1 (MQ=255)
                                                          ttGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTg                               >  2:5497061/1‑93 (MQ=255)
                                                          ttGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTg                               <  1:1002662/93‑1 (MQ=255)
                                                           tGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTgg                              >  1:7434504/1‑93 (MQ=255)
                                                            ggTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTggg                             <  2:5888038/93‑1 (MQ=255)
                                                              tgtTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGCGGATGACTTTTCTTCCTTTGCGTCGGTTGTTTCGACATTGAATAACCTGGGGc                           >  2:6586249/1‑93 (MQ=255)
                                                               gtTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGcc                          >  2:3398110/1‑93 (MQ=255)
                                                                 ttATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAg                        <  2:123968/93‑1 (MQ=255)
                                                                   aTTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAggg                      >  2:5132451/1‑93 (MQ=255)
                                                                    ttGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGc                     >  1:4952385/1‑93 (MQ=255)
                                                                     tGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCt                    <  2:4523990/93‑1 (MQ=255)
                                                                      gTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCtt                   >  2:1075128/1‑93 (MQ=255)
                                                                        cAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTgg                 <  2:4072766/93‑1 (MQ=255)
                                                                        cAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTgg                 <  1:4628543/93‑1 (MQ=255)
                                                                        cAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTgg                 <  2:7110894/93‑1 (MQ=255)
                                                                         aGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGc                <  2:3809062/93‑1 (MQ=255)
                                                                          gTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCg               >  2:4288331/1‑93 (MQ=255)
                                                                           tATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCgg              >  2:7228100/1‑92 (MQ=255)
                                                                           tATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCgg              >  1:1532275/1‑92 (MQ=255)
                                                                            aTGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTg             >  2:1747109/1‑93 (MQ=255)
                                                                            aTGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTg             >  1:6355906/1‑93 (MQ=255)
                                                                             tGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTgg            >  2:2457554/1‑93 (MQ=255)
                                                                                tGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTg         >  2:446357/1‑93 (MQ=255)
                                                                                tGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTg         >  1:5164740/1‑93 (MQ=255)
                                                                                tGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTg         <  2:555994/93‑1 (MQ=255)
                                                                                tGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTg         <  1:4733737/93‑1 (MQ=255)
                                                                                 ggCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGc        >  1:241877/1‑93 (MQ=255)
                                                                                  gCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCt       <  2:6360792/93‑1 (MQ=255)
                                                                                     aTTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGATATTGAATAACCTGGGGCCAGGGCTTGGCGTGGCTGCTGAt    >  1:7687638/1‑93 (MQ=255)
                                                                                     aTTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAt    >  2:6909032/1‑93 (MQ=255)
                                                                                     aTTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAt    >  1:7575464/1‑93 (MQ=255)
                                                                                             |                                                                                       
TCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑CACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAA  >  NC_000913/4031892‑4032070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑CACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTACC  >  NC_000913/4031891‑4032077
                                                                                               |                                                                                             
ATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑C                                                                                               >  SRR4302543.3170367/1‑94 (MQ=60)
ATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑C                                                                                               >  SRR4302543.4515757/1‑94 (MQ=60)
 TCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑CC                                                                                              <  SRR4302543.3557688/94‑1 (MQ=60)
  CGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑Cca                                                                                             >  SRR4302543.2332871/1‑92 (MQ=60)
  CGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑Cca                                                                                             >  SRR4302543.3970886/1‑92 (MQ=60)
  CGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑Cca                                                                                             <  SRR4302543.5790278/94‑3 (MQ=60)
  CGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑Cca                                                                                             >  SRR4302543.4196451/1‑92 (MQ=60)
   GCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑Ccac                                                                                            <  SRR4302543.1018465/94‑4 (MQ=60)
   GCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑Ccac                                                                                            <  SRR4302543.1922239/94‑4 (MQ=60)
    CGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACG                                                                                            >  SRR4302543.5811234/1‑94 (MQ=60)
       ACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGC                                                                                         <  SRR4302543.715191/94‑1 (MQ=60)
       ACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGC                                                                                         <  SRR4302543.1454367/94‑1 (MQ=60)
       ACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGC                                                                                         >  SRR4302543.597567/1‑94 (MQ=60)
        CTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCG                                                                                        >  SRR4302543.1905601/1‑94 (MQ=60)
        CTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCG                                                                                        <  SRR4302543.6070661/94‑1 (MQ=60)
        CTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCG                                                                                        <  SRR4302543.5157977/94‑1 (MQ=60)
         TGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGT                                                                                       >  SRR4302543.7002498/1‑94 (MQ=60)
         TGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGT                                                                                       <  SRR4302543.100188/94‑1 (MQ=60)
         TGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGG                                                                                       >  SRR4302543.1847757/1‑94 (MQ=60)
           CCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGG                                                                                     <  SRR4302543.4295244/94‑1 (MQ=60)
            CGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGA                                                                                    >  SRR4302543.2909570/1‑94 (MQ=60)
             GGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGAT                                                                                   >  SRR4302543.5454016/1‑94 (MQ=60)
             GGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGAT                                                                                   <  SRR4302543.6923103/94‑1 (MQ=60)
             GGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGAT                                                                                   <  SRR4302543.467459/94‑1 (MQ=60)
             CGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGAT                                                                                   <  SRR4302543.6528320/94‑1 (MQ=60)
              GAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATTCTGGCGATTATC‑GCCACGGGCGTGGATG                                                                                  >  SRR4302543.816366/1‑94 (MQ=60)
              GAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATG                                                                                  >  SRR4302543.5820096/1‑94 (MQ=60)
              GAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATG                                                                                  <  SRR4302543.4018695/94‑1 (MQ=60)
              GAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATG                                                                                  >  SRR4302543.816367/1‑94 (MQ=60)
              GAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATG                                                                                  <  SRR4302543.3273701/94‑1 (MQ=60)
              GAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATG                                                                                  >  SRR4302543.4872117/1‑94 (MQ=60)
               AACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGA                                                                                 <  SRR4302543.2962915/94‑1 (MQ=60)
                 CGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGG‑CACGGGCGgggtttact                                                                               >  SRR4302543.5836932/1‑85 (MQ=60)
                  GTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTT                                                                              >  SRR4302543.2221727/1‑94 (MQ=60)
                  GTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTT                                                                              >  SRR4302543.1416229/1‑94 (MQ=60)
                   TATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTT                                                                             <  SRR4302543.914327/94‑1 (MQ=60)
                    ATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTT                                                                            <  SRR4302543.4756742/94‑1 (MQ=60)
                    ATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTT                                                                            <  SRR4302543.6743247/94‑1 (MQ=60)
                    ATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTT                                                                            >  SRR4302543.24994/1‑94 (MQ=60)
                    ATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTT                                                                            >  SRR4302543.2773104/1‑94 (MQ=60)
                    ATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTT                                                                            >  SRR4302543.5369973/1‑94 (MQ=60)
                    ATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTT                                                                            >  SRR4302543.2416643/1‑94 (MQ=60)
                    ATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTT                                                                            >  SRR4302543.1950422/1‑94 (MQ=60)
                     TCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTC                                                                           >  SRR4302543.6030612/1‑94 (MQ=60)
                     TCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTC                                                                           >  SRR4302543.743194/1‑94 (MQ=60)
                      CCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCTTTGGAGTTTATTGTCAGTCTACTTGCGATTATC‑GCCACGTGCGTGGATGACTTTTCT                                                                          >  SRR4302543.2910495/1‑94 (MQ=60)
                      CCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCT                                                                          >  SRR4302543.3875528/1‑94 (MQ=60)
                      CCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCT                                                                          >  SRR4302543.7866552/1‑94 (MQ=60)
                      CCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCT                                                                          <  SRR4302543.1181287/94‑1 (MQ=60)
                       CTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTG                                                                         >  SRR4302543.3539183/1‑94 (MQ=60)
                        TCGAAGGCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGC                                                                        <  SRR4302543.7740001/94‑1 (MQ=60)
                         CGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCC                                                                       <  SRR4302543.4445482/94‑1 (MQ=60)
                          gaacgCGTTTGGGGATCGTTCTCCGCCTATGCTTTGGTGTATATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCT                                                                      <  SRR4302543.3741537/89‑1 (MQ=60)
                          GAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTTTGCCT                                                                      >  SRR4302543.2139503/1‑94 (MQ=60)
                          GAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCT                                                                      <  SRR4302543.3893039/94‑1 (MQ=60)
                           AAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTT                                                                     >  SRR4302543.6592266/1‑94 (MQ=60)
                           AAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTT                                                                     >  SRR4302543.6525825/1‑94 (MQ=60)
                           AAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTT                                                                     >  SRR4302543.6525826/1‑94 (MQ=60)
                            AGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTT                                                                    >  SRR4302543.3513017/1‑94 (MQ=60)
                            AGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTT                                                                    >  SRR4302543.1424189/1‑94 (MQ=60)
                            AGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTT                                                                    >  SRR4302543.2139628/1‑94 (MQ=60)
                             GCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTG                                                                   <  SRR4302543.3853340/94‑1 (MQ=60)
                              CCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGC                                                                  >  SRR4302543.683681/1‑94 (MQ=60)
                              CCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGC                                                                  >  SRR4302543.307084/1‑94 (MQ=60)
                               CGTTTGGGGTTTTTTCTCCGCCTTTGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCG                                                                 <  SRR4302543.7110115/94‑1 (MQ=60)
                               CGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATTCTGGCGATTATT‑GCCACGGGCGTGGATGACTGTTCTGCCTTTGCG                                                                 >  SRR4302543.7089977/1‑94 (MQ=60)
                               CGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCG                                                                 <  SRR4302543.7784654/94‑1 (MQ=60)
                               CGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCG                                                                 <  SRR4302543.3839655/94‑1 (MQ=60)
                                GTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATTCTGGCGGTTATC‑GCCACTGGCGCGCATGCCTTTTCTTCCTTTGCGT                                                                >  SRR4302543.6663471/1‑94 (MQ=60)
                                GTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGT                                                                >  SRR4302543.921271/1‑94 (MQ=60)
                                 TTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTC                                                               >  SRR4302543.3722420/1‑94 (MQ=60)
                                  TTGGTGATTTTTCTCTGCCTATGCATTGGTTTTTATTGTCAGTATGCTGGCGAGTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCG                                                              <  SRR4302543.680077/94‑1 (MQ=60)
                                  TTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCG                                                              >  SRR4302543.4636620/1‑94 (MQ=60)
                                  TTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCG                                                              <  SRR4302543.2024300/94‑1 (MQ=60)
                                   TGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG                                                             >  SRR4302543.7897390/1‑94 (MQ=60)
                                   TGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG                                                             >  SRR4302543.842322/1‑94 (MQ=60)
                                   TGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCAAGGGCGTGGATGACTTTTCTGCCTTTGCGTCGG                                                             <  SRR4302543.7629941/94‑1 (MQ=60)
                                   TGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGAGATTATC‑GCCACGGGCGTGGAGGACTTTTCTGCCTTTGCGTCGG                                                             <  SRR4302543.1672903/94‑1 (MQ=60)
                                     GGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTT                                                           <  SRR4302543.1660751/94‑1 (MQ=60)
                                      GGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTG                                                          >  SRR4302543.7700267/1‑94 (MQ=60)
                                       GATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGT                                                         >  SRR4302543.5328185/1‑94 (MQ=60)
                                       GATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGT                                                         <  SRR4302543.3221023/94‑1 (MQ=60)
                                       GATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGT                                                         <  SRR4302543.5478319/94‑1 (MQ=60)
                                        ATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTT                                                        >  SRR4302543.5123505/1‑94 (MQ=60)
                                        ATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTT                                                        <  SRR4302543.3175924/94‑1 (MQ=60)
                                        ATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTT                                                        <  SRR4302543.3175925/94‑1 (MQ=60)
                                        ATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGGTGTT                                                        >  SRR4302543.4448045/1‑94 (MQ=60)
                                        AATTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTT                                                        >  SRR4302543.2245756/1‑94 (MQ=60)
                                         TTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTG                                                       >  SRR4302543.2192915/1‑94 (MQ=60)
                                         TTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTG                                                       <  SRR4302543.2136/94‑1 (MQ=60)
                                          TTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGC                                                      <  SRR4302543.7321028/94‑1 (MQ=60)
                                           TTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCG                                                     <  SRR4302543.2917437/94‑1 (MQ=60)
                                           TTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCG                                                     >  SRR4302543.2969475/1‑94 (MQ=60)
                                           TTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCG                                                     >  SRR4302543.5922261/1‑94 (MQ=60)
                                           TTTCTCCCCCTATGCATGGGTGTTTATTGGCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATTACTTTTCTGCCTTTGCGTCGGTTGTTGCG                                                     <  SRR4302543.1843277/94‑1 (MQ=60)
                                           TGTCTCCGCCTATGCATTGGTGTTTATTGGCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCG                                                     <  SRR4302543.1843276/94‑1 (MQ=60)
                                              CTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACA                                                  >  SRR4302543.6569400/1‑94 (MQ=60)
                                               TCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACAT                                                 <  SRR4302543.587247/94‑1 (MQ=60)
                                                CCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATT                                                >  SRR4302543.497130/1‑94 (MQ=60)
                                                CCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATT                                                <  SRR4302543.5780346/94‑1 (MQ=60)
                                                 CGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTG                                               >  SRR4302543.5341866/1‑94 (MQ=60)
                                                  GCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGA                                              <  SRR4302543.4190160/94‑1 (MQ=60)
                                                  GCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGA                                              >  SRR4302543.383367/1‑94 (MQ=60)
                                                  GCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGA                                              >  SRR4302543.4623569/1‑94 (MQ=60)
                                                   CCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAA                                             <  SRR4302543.3033192/94‑1 (MQ=60)
                                                   CCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAA                                             >  SRR4302543.7495765/1‑94 (MQ=60)
                                                    CTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAAT                                            >  SRR4302543.463930/1‑94 (MQ=60)
                                                    CTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAAT                                            <  SRR4302543.5641226/94‑1 (MQ=60)
                                                    CTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAAT                                            >  SRR4302543.6789636/1‑94 (MQ=60)
                                                    CTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAAT                                            >  SRR4302543.4813262/1‑94 (MQ=60)
                                                     TATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATA                                           <  SRR4302543.2892509/94‑1 (MQ=60)
                                                     TATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATA                                           >  SRR4302543.4271949/1‑94 (MQ=60)
                                                     TATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATA                                           <  SRR4302543.3598186/94‑1 (MQ=60)
                                                      ATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAA                                          <  SRR4302543.3728014/94‑1 (MQ=60)
                                                      ATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAA                                          >  SRR4302543.5147116/1‑94 (MQ=60)
                                                       TGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAAC                                         <  SRR4302543.2944310/94‑1 (MQ=60)
                                                        GCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACC                                        <  SRR4302543.4340423/94‑1 (MQ=60)
                                                        GCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACC                                        <  SRR4302543.5509856/94‑1 (MQ=60)
                                                        GCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACC                                        <  SRR4302543.6064709/94‑1 (MQ=60)
                                                        GCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACC                                        >  SRR4302543.7872971/1‑94 (MQ=60)
                                                        GCATTGGTGTTTAATGTCAGTATGATGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACC                                        <  SRR4302543.7063703/94‑1 (MQ=60)
                                                         CATTGGTGTTTATTGTCAGTATTCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCT                                       >  SRR4302543.1402852/1‑94 (MQ=60)
                                                         CATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCT                                       >  SRR4302543.2435344/1‑94 (MQ=60)
                                                          ATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTG                                      >  SRR4302543.7874210/1‑94 (MQ=60)
                                                          ATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTG                                      >  SRR4302543.5985846/1‑94 (MQ=60)
                                                          ATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTG                                      <  SRR4302543.623349/94‑1 (MQ=60)
                                                          ATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTG                                      >  SRR4302543.5421522/1‑94 (MQ=60)
                                                          ATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTG                                      >  SRR4302543.2144829/1‑94 (MQ=60)
                                                           TTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGG                                     <  SRR4302543.1011524/94‑1 (MQ=60)
                                                           TTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGG                                     <  SRR4302543.1298994/94‑1 (MQ=60)
                                                           TTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGG                                     <  SRR4302543.4482048/94‑1 (MQ=60)
                                                           TTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGG                                     <  SRR4302543.2051006/94‑1 (MQ=60)
                                                           TTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGG                                     >  SRR4302543.7505774/1‑94 (MQ=60)
                                                            TGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGG                                    <  SRR4302543.2317445/94‑1 (MQ=60)
                                                            TGGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGG                                    >  SRR4302543.7558897/1‑94 (MQ=60)
                                                             GGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGG                                   <  SRR4302543.4660195/94‑1 (MQ=60)
                                                             GGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGG                                   <  SRR4302543.4641560/94‑1 (MQ=60)
                                                             GGTGTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGG                                   <  SRR4302543.3002578/94‑1 (MQ=60)
                                                              GTGTTTATTGTGAGTATGGCGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGC                                  <  SRR4302543.1303491/94‑1 (MQ=60)
                                                                GTTTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCA                                <  SRR4302543.1441676/94‑1 (MQ=60)
                                                                  TTATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGG                              >  SRR4302543.4884167/1‑94 (MQ=60)
                                                                    ATTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGC                            >  SRR4302543.4997487/1‑94 (MQ=60)
                                                                     TTGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCT                           <  SRR4302543.5242566/94‑1 (MQ=60)
                                                                      TGTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTT                          <  SRR4302543.5088889/94‑1 (MQ=60)
                                                                       GTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTG                         <  SRR4302543.7737837/94‑1 (MQ=60)
                                                                       GTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTG                         <  SRR4302543.994355/94‑1 (MQ=60)
                                                                       GTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTG                         <  SRR4302543.6352099/94‑1 (MQ=60)
                                                                       GTCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTG                         >  SRR4302543.5521841/1‑94 (MQ=60)
                                                                        TCAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGAATTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGG                        <  SRR4302543.5473037/94‑1 (MQ=60)
                                                                         CAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGC                       <  SRR4302543.4670607/94‑1 (MQ=60)
                                                                         CAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGC                       <  SRR4302543.6351144/94‑1 (MQ=60)
                                                                         CAGTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGC                       <  SRR4302543.4670608/94‑1 (MQ=60)
                                                                           GTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGT                     <  SRR4302543.531750/94‑1 (MQ=60)
                                                                           GTATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGG                     >  SRR4302543.1546012/1‑94 (MQ=60)
                                                                            TATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTG                    >  SRR4302543.6415669/1‑94 (MQ=60)
                                                                            TATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTG                    <  SRR4302543.4830083/94‑1 (MQ=60)
                                                                             ATGCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCGGGGCTTGGCGTGG                   >  SRR4302543.6140807/1‑94 (MQ=60)
                                                                               GCTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTT                 <  SRR4302543.6499407/94‑1 (MQ=60)
                                                                                CTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGCATAACCTGGGGCCAGGGCTTGGCGTGGTTG                >  SRR4302543.282361/1‑94 (MQ=60)
                                                                                CTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTG                >  SRR4302543.5211405/1‑94 (MQ=60)
                                                                                CTGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTG                <  SRR4302543.2281744/94‑1 (MQ=60)
                                                                                 TGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGC               >  SRR4302543.5940725/1‑94 (MQ=60)
                                                                                 TGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGC               <  SRR4302543.4776999/94‑1 (MQ=60)
                                                                                 TGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGC               >  SRR4302543.6258889/1‑94 (MQ=60)
                                                                                 TGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGC               >  SRR4302543.243975/1‑94 (MQ=60)
                                                                                 TGGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGC               >  SRR4302543.3695563/1‑94 (MQ=60)
                                                                                  GGCGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCT              <  SRR4302543.3818534/94‑1 (MQ=60)
                                                                                    CGATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGA            <  SRR4302543.5182629/94‑1 (MQ=60)
                                                                                     GATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGATATTGAATAACCTGGGGCCAGGGCTTGGCGTGGCTGCTGAT           >  SRR4302543.7760436/1‑94 (MQ=60)
                                                                                     GATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAT           >  SRR4302543.963576/1‑94 (MQ=60)
                                                                                     GATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAT           >  SRR4302543.7647510/1‑94 (MQ=60)
                                                                                     GATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAT           >  SRR4302543.3777541/1‑94 (MQ=60)
                                                                                     GATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGAT           >  SRR4302543.5195226/1‑94 (MQ=60)
                                                                                     GATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTAGGGCCAGGGCTTAGCGTGCTTCCTGAT           >  SRR4302543.1948270/1‑94 (MQ=60)
                                                                                      ATTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATA          >  SRR4302543.4616851/1‑94 (MQ=60)
                                                                                       TTATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAA         <  SRR4302543.3407675/94‑1 (MQ=60)
                                                                                        TATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAAC        >  SRR4302543.3745889/1‑94 (MQ=60)
                                                                                         ATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACT       >  SRR4302543.3089577/1‑94 (MQ=60)
                                                                                         ATC‑GCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACT       >  SRR4302543.533206/1‑94 (MQ=60)
                                                                                               CACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTACC  <  SRR4302543.151349/94‑1 (MQ=60)
                                                                                               |                                                                                             
ATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATC‑G‑CACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTACC  >  NC_000913/4031891‑4032077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑