Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,081,716	A→G	F563L (TTC→CTC)	fdoG ←	formate dehydrogenase‑O, major subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,081,716	0	A	G	100.0%	1274.4 / NA	401	F563L (TTC→CTC)	fdoG	formate dehydrogenase‑O, major subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (190/211); total (190/211)

Only 100 of 411 total aligned reads displayed.

AGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTT  >  NC_000913/4081626‑4081805

 gAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGa                                                                                        >  1:2613605/1‑93 (MQ=255)

 gAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGa                                                                                        >  1:5491205/1‑93 (MQ=255)

    gTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGc                                                                                     >  2:1555513/1‑93 (MQ=255)

    gTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGc                                                                                     >  2:6196114/1‑93 (MQ=255)

     ttAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCa                                                                                    >  1:1720752/1‑93 (MQ=255)

     ttAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCa                                                                                    >  1:7911949/1‑93 (MQ=255)

     ttAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCa                                                                                    >  1:5761629/1‑93 (MQ=255)

      tAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCaa                                                                                   >  1:2208751/1‑93 (MQ=255)

       agagGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAAc                                                                                  <  1:6157522/93‑1 (MQ=255)

        gagGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACa                                                                                 >  1:6502193/1‑93 (MQ=255)

        gagGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACa                                                                                 <  2:2684519/93‑1 (MQ=255)

        gagGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACa                                                                                 <  2:4334624/93‑1 (MQ=255)

         agGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAg                                                                                <  2:2334984/93‑1 (MQ=255)

          ggTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAgg                                                                               <  1:1067650/93‑1 (MQ=255)

          ggTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAgg                                                                               <  2:4950687/93‑1 (MQ=255)

            tttCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGt                                                                             >  2:2482120/1‑93 (MQ=255)

            tttCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGt                                                                             >  2:6847469/1‑93 (MQ=255)

             ttcagtgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGtc                                                                            >  2:6305091/1‑92 (MQ=255)

              tcagtgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTa                                                                           >  1:521672/1‑93 (MQ=255)

               cagtgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTaa                                                                          <  1:2848801/93‑1 (MQ=255)

                agtgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTaaa                                                                         >  2:1342359/1‑93 (MQ=255)

                agtgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTaaa                                                                         >  2:6024949/1‑93 (MQ=255)

                agggttcagtgGCGCGATGGTGACGATTATCTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTaaa                                                                         <  1:1983932/90‑1 (MQ=255)

                 gtgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAg                                                                        <  2:5518004/93‑1 (MQ=255)

                  tgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGc                                                                       <  2:3666341/93‑1 (MQ=255)

                   gttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGcc                                                                      >  2:4279936/1‑93 (MQ=255)

                    ttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGccc                                                                     >  1:6933807/1‑93 (MQ=255)

                    ttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGccc                                                                     <  2:7577644/93‑1 (MQ=255)

                     tcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCt                                                                    <  1:6740581/93‑1 (MQ=255)

                     tcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTCTTCGGAAGTGAGGCAACAGGGTTAAAGCCCt                                                                    <  2:3452051/93‑1 (MQ=255)

                      cagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTg                                                                   <  2:7926480/93‑1 (MQ=255)

                        gtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTTGGGAGTGAGGCAACAGGGTTAAAGCCCTGGc                                                                 >  2:4553238/1‑93 (MQ=255)

                         tgGGTCGATGGTGACGAGGTACTTCAGTTTCGACAGATAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCa                                                                >  2:5406031/1‑93 (MQ=38)

                           ggTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGa                                                              <  1:5861265/93‑1 (MQ=255)

                             tCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGata                                                            <  2:2068907/93‑1 (MQ=255)

                             tCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGata                                                            >  2:174749/1‑93 (MQ=255)

                             tCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGata                                                            >  1:3694450/1‑93 (MQ=255)

                              cGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGatat                                                           >  1:4311908/1‑93 (MQ=255)

                               gATGCTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGAtata                                                          <  2:6986274/93‑1 (MQ=255)

                                aTGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAg                                                         <  2:3539704/93‑1 (MQ=255)

                                aTGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAg                                                         >  2:5593185/1‑93 (MQ=255)

                                 tGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGc                                                        <  2:5208648/93‑1 (MQ=255)

                                    tGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAt                                                     <  1:5270891/93‑1 (MQ=255)

                                    tGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAt                                                     <  2:4181417/93‑1 (MQ=255)

                                     gACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAtt                                                    <  2:3286470/93‑1 (MQ=255)

                                     gACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAtt                                                    >  1:7271652/1‑93 (MQ=255)

                                     gACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAtt                                                    <  1:1533889/93‑1 (MQ=255)

                                     gACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAtt                                                    >  1:986165/1‑93 (MQ=255)

                                      aCGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTg                                                   >  1:6593607/1‑93 (MQ=255)

                                      aCGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTg                                                   <  1:6248441/93‑1 (MQ=255)

                                       cGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGa                                                  <  1:291525/93‑1 (MQ=255)

                                        gAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAc                                                 >  2:6744924/1‑93 (MQ=255)

                                        gAGGAACTTCAGTCTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACATGGTTAAAGCCCTGGCAGATATAGCCATTGAc                                                 <  2:732282/93‑1 (MQ=255)

                                          ggAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCt                                               <  1:2717475/93‑1 (MQ=255)

                                              cTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGcc                                           >  2:6472645/1‑93 (MQ=255)

                                              cTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGcc                                           >  1:413285/1‑93 (MQ=255)

                                                  aGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCctct                                       >  1:4020785/1‑93 (MQ=255)

                                                   gTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCtt                                      >  2:3960616/1‑93 (MQ=255)

                                                        gacagacaACCGATCACTTTGTTTTTGTTCGGGAGCGAGGCCACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTtcatc                                 >  2:4050213/1‑93 (MQ=255)

                                                         acagacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTtcatca                                >  1:3907977/1‑93 (MQ=255)

                                                         acagacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTtcatca                                >  2:7673049/1‑93 (MQ=255)

                                                           agacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCatcatc                              <  2:1135266/93‑1 (MQ=255)

                                                           agacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCatcatc                              <  1:4268250/93‑1 (MQ=255)

                                                           agacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCatcatc                              <  2:1396659/93‑1 (MQ=255)

                                                            gacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCAtct                             >  1:3518257/1‑93 (MQ=255)

                                                            gacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCAtct                             <  1:1304810/93‑1 (MQ=255)

                                                               aaCCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGa                          >  1:4841284/1‑93 (MQ=255)

                                                               aaCCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGa                          >  1:3590899/1‑93 (MQ=255)

                                                                aCCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGaa                         <  2:3914465/93‑1 (MQ=255)

                                                                 ccGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAg                        >  2:6604963/1‑93 (MQ=255)

                                                                  cGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGt                       >  1:31992/1‑93 (MQ=255)

                                                                  cGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGt                       >  1:3099987/1‑93 (MQ=255)

                                                                  cGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGt                       >  2:6113776/1‑93 (MQ=255)

                                                                   gATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTa                      >  2:1924884/1‑93 (MQ=255)

                                                                   gATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTa                      >  2:3789822/1‑93 (MQ=255)

                                                                    aTCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAt                     <  2:4643510/93‑1 (MQ=255)

                                                                    aTCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAt                     >  1:1676978/1‑93 (MQ=255)

                                                                    aTCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAt                     >  1:7533440/1‑93 (MQ=255)

                                                                      cACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTg                   <  1:4966191/93‑1 (MQ=255)

                                                                       aCTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGc                  <  2:2015984/93‑1 (MQ=255)

                                                                       aCTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCCTGCCCTCTTTCATCATCTCGAAGTATTGc                  >  2:570963/1‑93 (MQ=255)

                                                                        cTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCa                 <  2:4836781/93‑1 (MQ=255)

                                                                        cTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCa                 >  2:7110218/1‑93 (MQ=255)

                                                                        cTTTGTTTTTGTTCGGGAGTGAGCCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCa                 <  2:4308686/93‑1 (MQ=255)

                                                                        cTTTGTGTTTGTTCGGGAGGTAGGCAACAGCGTTAAAGCCCCGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCa                 <  1:182697/93‑1 (MQ=255)

                                                                         tttgtttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAg                >  1:1273108/1‑93 (MQ=255)

                                                                          ttgtttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAgg               <  2:5099345/93‑1 (MQ=255)

                                                                          ttgtttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAgg               >  2:3400121/1‑93 (MQ=255)

                                                                            gtttttgttCGGGAGTGAGGCAGCAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAc             <  1:7022546/93‑1 (MQ=255)

                                                                            gtttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAc             >  1:5122941/1‑93 (MQ=255)

                                                                              ttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAcgt           <  1:4548363/93‑1 (MQ=255)

                                                                               tttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAcgtc          >  2:6411704/1‑93 (MQ=255)

                                                                                ttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAcgtcg         <  2:1792933/93‑1 (MQ=255)

                                                                                  gttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTa       >  1:7366993/1‑93 (MQ=255)

                                                                                  gttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTa       <  2:6926607/93‑1 (MQ=255)

                                                                                     cGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGcc    >  1:1404872/1‑93 (MQ=255)

                                                                                     cGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGcc    <  2:4768357/93‑1 (MQ=255)

                                                                                      gggAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCt   <  1:436932/93‑1 (MQ=255)

                                                                                       ggAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCtt  >  2:3031140/1‑93 (MQ=255)

                                                                                       ggAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCtt  >  2:2812947/1‑93 (MQ=255)

AGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTT  >  NC_000913/4081626‑4081805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCCAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTATC  >  NC_000913/4081623‑4081809

GCCAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAG                                                                                               <  SRR4302543.5487613/94‑1 (MQ=60)

GCCAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAG                                                                                               <  SRR4302543.7001569/94‑1 (MQ=60)

 CCAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGT                                                                                              >  SRR4302543.1026383/1‑94 (MQ=60)

  CAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTG                                                                                             >  SRR4302543.3006715/1‑94 (MQ=60)

  CAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTG                                                                                             >  SRR4302543.4880894/1‑94 (MQ=60)

   AGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGA                                                                                            >  SRR4302543.5541005/1‑94 (MQ=60)

   AGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGA                                                                                            >  SRR4302543.2637312/1‑94 (MQ=60)

    GAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAG                                                                                           <  SRR4302543.7558112/94‑1 (MQ=60)

     AAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGG                                                                                          <  SRR4302543.2770795/94‑1 (MQ=60)

     AAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGG                                                                                          <  SRR4302543.2212161/94‑1 (MQ=60)

     AAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGG                                                                                          <  SRR4302543.4919578/94‑1 (MQ=60)

     AAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGG                                                                                          >  SRR4302543.4231527/1‑94 (MQ=60)

      AGTTGGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGC                                                                                         >  SRR4302543.4991804/1‑94 (MQ=60)

      AGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGC                                                                                         >  SRR4302543.705663/1‑94 (MQ=60)

      AGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGC                                                                                         <  SRR4302543.2495810/94‑1 (MQ=60)

      AGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGC                                                                                         >  SRR4302543.4376471/1‑94 (MQ=60)

      AGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGC                                                                                         >  SRR4302543.1863213/1‑94 (MQ=60)

       GTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCA                                                                                        >  SRR4302543.1736103/1‑94 (MQ=60)

       GTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCA                                                                                        >  SRR4302543.5814117/1‑94 (MQ=60)

       GTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCA                                                                                        >  SRR4302543.5894127/1‑94 (MQ=60)

       GTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCA                                                                                        >  SRR4302543.6255884/1‑94 (MQ=60)

       GTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCA                                                                                        >  SRR4302543.7986281/1‑94 (MQ=60)

       GTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCA                                                                                        >  SRR4302543.1538717/1‑94 (MQ=60)

        TTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAA                                                                                       >  SRR4302543.2228646/1‑94 (MQ=60)

        TTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAA                                                                                       >  SRR4302543.5153638/1‑94 (MQ=60)

          AGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACA                                                                                     <  SRR4302543.3716344/94‑1 (MQ=60)

          AGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACA                                                                                     >  SRR4302543.6563444/1‑94 (MQ=60)

          AGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACA                                                                                     <  SRR4302543.6215805/94‑1 (MQ=60)

          AGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACA                                                                                     <  SRR4302543.1292079/94‑1 (MQ=60)

          AGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACA                                                                                     <  SRR4302543.1292080/94‑1 (MQ=60)

           GAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGCTCACTTTGTTTTTGTTCGGGAGTGAGGCAACAG                                                                                    >  SRR4302543.447177/1‑94 (MQ=60)

           GAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAG                                                                                    >  SRR4302543.7957472/1‑94 (MQ=60)

            AGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGG                                                                                   <  SRR4302543.7311352/94‑1 (MQ=60)

            AGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGG                                                                                   <  SRR4302543.4681126/94‑1 (MQ=60)

             GGTTTCAGTGTTGAGTGGGTAGATGGTCACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGG                                                                                  <  SRR4302543.5637310/94‑1 (MQ=60)

             GGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGG                                                                                  <  SRR4302543.7956921/94‑1 (MQ=60)

             GGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGG                                                                                  <  SRR4302543.1077245/94‑1 (MQ=60)

             GGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGG                                                                                  <  SRR4302543.1696047/94‑1 (MQ=60)

               TTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTT                                                                                <  SRR4302543.7031532/94‑1 (MQ=60)

               TTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTT                                                                                >  SRR4302543.5145515/1‑94 (MQ=60)

                TTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTA                                                                               >  SRR4302543.526510/1‑94 (MQ=60)

                 TCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTAGGGAGTGAGGCAACAGGGTTAA                                                                              <  SRR4302543.1401988/94‑1 (MQ=60)

                  TAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTCCGGGAGTGAGGCAACAGGGTTAAA                                                                             <  SRR4302543.7054825/94‑1 (MQ=60)

                  CAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAA                                                                             <  SRR4302543.2874809/94‑1 (MQ=60)

                   AGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAG                                                                            <  SRR4302543.5731553/94‑1 (MQ=60)

                   AGGGTTCAGTGGCGCGATGGTGACGATTATCTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAG                                                                            <  SRR4302543.2001723/94‑1 (MQ=60)

                      GTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCC                                                                         >  SRR4302543.6999032/1‑94 (MQ=60)

                      GTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCC                                                                         <  SRR4302543.6621570/94‑1 (MQ=60)

                      GTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCC                                                                         >  SRR4302543.5189494/1‑94 (MQ=60)

                      GTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCC                                                                         <  SRR4302543.3983290/94‑1 (MQ=60)

                      GTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCC                                                                         >  SRR4302543.4329892/1‑94 (MQ=60)

                       TTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCT                                                                        >  SRR4302543.3939098/1‑94 (MQ=60)

                       TTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCT                                                                        <  SRR4302543.5228768/94‑1 (MQ=60)

                       TTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCT                                                                        <  SRR4302543.7488328/94‑1 (MQ=60)

                       TTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCT                                                                        <  SRR4302543.1400795/94‑1 (MQ=60)

                       TTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCG                                                                        >  SRR4302543.1586693/1‑94 (MQ=60)

                        TCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTG                                                                       <  SRR4302543.6296080/94‑1 (MQ=60)

                        TCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTG                                                                       >  SRR4302543.4170116/1‑94 (MQ=60)

                        TCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTG                                                                       <  SRR4302543.1695302/94‑1 (MQ=60)

                        TCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTG                                                                       <  SRR4302543.6804242/94‑1 (MQ=60)

                          AGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGC                                                                     <  SRR4302543.4462793/94‑1 (MQ=60)

                          AGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGC                                                                     >  SRR4302543.7558258/1‑94 (MQ=60)

                           GTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCA                                                                    >  SRR4302543.4104419/1‑94 (MQ=60)

                            TGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAG                                                                   <  SRR4302543.7638019/94‑1 (MQ=60)

                            TAGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAG                                                                   <  SRR4302543.118716/94‑1 (MQ=60)

                            GGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAG                                                                   <  SRR4302543.6693166/94‑1 (MQ=60)

                             GGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGA                                                                  <  SRR4302543.541792/94‑1 (MQ=60)

                              GGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGAT                                                                 <  SRR4302543.5914608/94‑1 (MQ=60)

                              GGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCAATTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAATTCCTGGCAGAT                                                                 >  SRR4302543.6461770/1‑94 (MQ=60)

                               GTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATA                                                                >  SRR4302543.3726934/1‑94 (MQ=60)

                                TCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATAT                                                               <  SRR4302543.407200/94‑1 (MQ=60)

                                TCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATAT                                                               >  SRR4302543.4351074/1‑94 (MQ=60)

                                TCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATAT                                                               <  SRR4302543.3697623/94‑1 (MQ=60)

                                 CGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATA                                                              >  SRR4302543.2917013/1‑94 (MQ=60)

                                  GATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAG                                                             <  SRR4302543.2264104/94‑1 (MQ=60)

                                  GATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAG                                                             <  SRR4302543.4170353/94‑1 (MQ=60)

                                   ATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGC                                                            >  SRR4302543.5908623/1‑94 (MQ=60)

                                   ATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGC                                                            >  SRR4302543.5289781/1‑94 (MQ=60)

                                   ATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGC                                                            >  SRR4302543.1449870/1‑94 (MQ=60)

                                       TGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATT                                                        <  SRR4302543.5318441/94‑1 (MQ=60)

                                       TGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATT                                                        >  SRR4302543.7341895/1‑94 (MQ=60)

                                       TGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATT                                                        >  SRR4302543.994865/1‑94 (MQ=60)

                                        GACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACCGGGTTAAAGCCCTGGCAGATATAGCCATTG                                                       >  SRR4302543.2794116/1‑94 (MQ=60)

                                        GACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTG                                                       <  SRR4302543.1723476/94‑1 (MQ=60)

                                        GACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTG                                                       <  SRR4302543.1547632/94‑1 (MQ=60)

                                        GACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTG                                                       >  SRR4302543.6655731/1‑94 (MQ=60)

                                         ACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGA                                                      <  SRR4302543.3134741/94‑1 (MQ=60)

                                         ACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGA                                                      <  SRR4302543.6307385/94‑1 (MQ=60)

                                          CGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAC                                                     >  SRR4302543.5814917/1‑94 (MQ=60)

                                          CGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAC                                                     <  SRR4302543.4041385/94‑1 (MQ=60)

                                          CGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAC                                                     <  SRR4302543.294131/94‑1 (MQ=60)

                                           GAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACC                                                    >  SRR4302543.5352918/1‑94 (MQ=60)

                                           GAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACC                                                    <  SRR4302543.4323867/94‑1 (MQ=60)

                                            AGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCT                                                   >  SRR4302543.383971/1‑94 (MQ=60)

                                            AGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCT                                                   >  SRR4302543.3378648/1‑94 (MQ=60)

                                             GGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTT                                                  >  SRR4302543.4913297/1‑94 (MQ=60)

                                             GGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTT                                                  <  SRR4302543.2742168/94‑1 (MQ=60)

                                              GAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTG                                                 <  SRR4302543.3577931/94‑1 (MQ=60)

                                               AACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGC                                                <  SRR4302543.1290761/94‑1 (MQ=60)

                                               AACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGC                                                >  SRR4302543.6794395/1‑94 (MQ=60)

                                               AACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGC                                                >  SRR4302543.6794396/1‑94 (MQ=60)

                                                ACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCC                                               >  SRR4302543.417140/1‑94 (MQ=60)

                                                ACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCC                                               >  SRR4302543.6030254/1‑94 (MQ=60)

                                                  TTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCT                                             >  SRR4302543.5112329/1‑94 (MQ=60)

                                                  TTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCT                                             <  SRR4302543.5211357/94‑1 (MQ=60)

                                                    CAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCT                                           <  SRR4302543.2585862/94‑1 (MQ=60)

                                                    CAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCT                                           >  SRR4302543.4056699/1‑94 (MQ=60)

                                                      GTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTT                                         >  SRR4302543.4812435/1‑94 (MQ=60)

                                                        TTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCA                                       <  SRR4302543.7299224/94‑1 (MQ=60)

                                                         TCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCAT                                      <  SRR4302543.388237/94‑1 (MQ=60)

                                                          CGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATC                                     <  SRR4302543.1986354/94‑1 (MQ=60)

                                                           GACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCT                                    >  SRR4302543.6311624/1‑94 (MQ=60)

                                                           GACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCA                                    >  SRR4302543.3942469/1‑94 (MQ=60)

                                                            ACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCAT                                   <  SRR4302543.7423862/94‑1 (MQ=60)

                                                            ACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCAT                                   <  SRR4302543.3746794/94‑1 (MQ=60)

                                                            ACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCAT                                   <  SRR4302543.7423861/94‑1 (MQ=60)

                                                             CAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATC                                  >  SRR4302543.6275630/1‑94 (MQ=60)

                                                             CAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATC                                  >  SRR4302543.3567691/1‑94 (MQ=60)

                                                             CAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATC                                  >  SRR4302543.182245/1‑94 (MQ=60)

                                                             CAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATC                                  >  SRR4302543.3340659/1‑94 (MQ=60)

                                                              AGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCT                                 <  SRR4302543.2212986/94‑1 (MQ=60)

                                                              AGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCT                                 <  SRR4302543.4307029/94‑1 (MQ=60)

                                                              AGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCT                                 >  SRR4302543.3549665/1‑94 (MQ=60)

                                                               GACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTC                                <  SRR4302543.1316397/94‑1 (MQ=60)

                                                                ACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCG                               >  SRR4302543.6601803/1‑94 (MQ=60)

                                                                ACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCG                               >  SRR4302543.6601804/1‑94 (MQ=60)

                                                                 CAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGA                              >  SRR4302543.4885428/1‑94 (MQ=60)

                                                                 CAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGA                              >  SRR4302543.3622601/1‑94 (MQ=60)

                                                                  AACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAA                             <  SRR4302543.7315466/94‑1 (MQ=60)

                                                                  AACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAA                             <  SRR4302543.3583145/94‑1 (MQ=60)

                                                                    CCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGT                           >  SRR4302543.32285/1‑94 (MQ=60)

                                                                    CCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGT                           >  SRR4302543.32284/1‑94 (MQ=60)

                                                                    CCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGT                           >  SRR4302543.3127873/1‑94 (MQ=60)

                                                                    CCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGT                           >  SRR4302543.5290327/1‑94 (MQ=60)

                                                                     CGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTA                          <  SRR4302543.2974244/94‑1 (MQ=60)

                                                                     CGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTA                          <  SRR4302543.7356532/94‑1 (MQ=60)

                                                                      GATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAT                         >  SRR4302543.7605274/1‑94 (MQ=60)

                                                                      GATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAT                         <  SRR4302543.3974717/94‑1 (MQ=60)

                                                                      GATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAT                         >  SRR4302543.987882/1‑94 (MQ=60)

                                                                      GATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAT                         >  SRR4302543.1692011/1‑94 (MQ=60)

                                                                      GATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAT                         >  SRR4302543.1929879/1‑94 (MQ=60)

                                                                      GATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAT                         <  SRR4302543.2937777/94‑1 (MQ=60)

                                                                      GATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAT                         >  SRR4302543.987883/1‑94 (MQ=60)

                                                                      CATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAT                         <  SRR4302543.3162785/94‑1 (MQ=60)

                                                                       ATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATT                        <  SRR4302543.223293/94‑1 (MQ=60)

                                                                        TCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTG                       >  SRR4302543.4276495/1‑94 (MQ=60)

                                                                        TCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTG                       <  SRR4302543.66083/94‑1 (MQ=60)

                                                                         CACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGC                      >  SRR4302543.5072521/1‑94 (MQ=60)

                                                                         CACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGC                      <  SRR4302543.5011397/94‑1 (MQ=60)

                                                                         CACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGC                      <  SRR4302543.1375309/94‑1 (MQ=60)

                                                                         CACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGC                      >  SRR4302543.1783051/1‑94 (MQ=60)

                                                                          ACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCA                     >  SRR4302543.529951/1‑94 (MQ=60)

                                                                          ACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCA                     >  SRR4302543.3691611/1‑94 (MQ=60)

                                                                          ACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCA                     >  SRR4302543.3048270/1‑94 (MQ=60)

                                                                          ACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCA                     >  SRR4302543.6940076/1‑94 (MQ=60)

                                                                           CTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAG                    <  SRR4302543.184249/94‑1 (MQ=60)

                                                                           CTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAG                    <  SRR4302543.6390145/94‑1 (MQ=60)

                                                                           CTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAG                    <  SRR4302543.211410/94‑1 (MQ=60)

                                                                           CTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAG                    >  SRR4302543.1284480/1‑94 (MQ=60)

                                                                           CTTTGTGTTTGTTCGGGAGGTAGGCAACAGCGTTAAAGCCCCGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAG                    <  SRR4302543.184250/94‑1 (MQ=60)

                                                                            TTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGTCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGG                   <  SRR4302543.2659656/94‑1 (MQ=60)

                                                                              TGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAC                 <  SRR4302543.994157/94‑1 (MQ=60)

                                                                              TGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAC                 >  SRR4302543.347066/1‑94 (MQ=60)

                                                                              TGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAC                 >  SRR4302543.5169262/1‑94 (MQ=60)

                                                                               GTTTTTGTTCGGGAGTGAGGCAGCAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACG                <  SRR4302543.7089830/94‑1 (MQ=60)

                                                                               GTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACG                >  SRR4302543.5769930/1‑94 (MQ=60)

                                                                                TTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGT               >  SRR4302543.2884862/1‑94 (MQ=60)

                                                                                 TTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTC              <  SRR4302543.4589784/94‑1 (MQ=60)

                                                                                 TTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTC              >  SRR4302543.5964366/1‑94 (MQ=60)

                                                                                  TTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCG             <  SRR4302543.1281693/94‑1 (MQ=60)

                                                                                  TTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCG             <  SRR4302543.1281694/94‑1 (MQ=60)

                                                                                  TTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCG             >  SRR4302543.2745150/1‑94 (MQ=60)

                                                                                   TTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCGTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGT            <  SRR4302543.4452755/94‑1 (MQ=60)

                                                                                    TGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTA           >  SRR4302543.1661245/1‑94 (MQ=60)

                                                                                    TGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTA           >  SRR4302543.7437831/1‑94 (MQ=60)

                                                                                     GTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAG          >  SRR4302543.1685567/1‑94 (MQ=60)

                                                                                     GTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAG          <  SRR4302543.273067/94‑1 (MQ=60)

                                                                                      TTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGC         <  SRR4302543.4385407/94‑1 (MQ=60)

                                                                                       TCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCC        >  SRR4302543.1417557/1‑94 (MQ=60)

                                                                                        CGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCT       >  SRR4302543.2639430/1‑94 (MQ=60)

                                                                                        CGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCT       <  SRR4302543.6979246/94‑1 (MQ=60)

                                                                                         GGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTTTTTCAcctcctcgaggtatgccgggaggccgtagcctt      >  SRR4302543.4350382/1‑61 (MQ=60)

                                                                                         GGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTccacactctcgaagtattaacgcagtcccagtcctt      >  SRR4302543.4350383/1‑58 (MQ=60)

                                                                                         GGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTT      >  SRR4302543.551565/1‑94 (MQ=60)

                                                                                         GGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTT      >  SRR4302543.6163717/1‑94 (MQ=60)

                                                                                         GGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTT      <  SRR4302543.441026/94‑1 (MQ=60)

                                                                                         GGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTT      >  SRR4302543.1484309/1‑94 (MQ=60)

                                                                                         GGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTT      <  SRR4302543.441025/94‑1 (MQ=60)

                                                                                          GGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATGTGGAAGTATTGCAGGACGTCGTAGCCTTA     >  SRR4302543.3005885/1‑94 (MQ=60)

                                                                                          GGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTT     <  SRR4302543.6847467/94‑1 (MQ=60)

                                                                                          GGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTT     >  SRR4302543.3005884/1‑94 (MQ=60)

                                                                                           GAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTA    <  SRR4302543.6217395/94‑1 (MQ=60)

                                                                                            AGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGCAGTATTGCAGGACGTCGTAGCCTTTAT   >  SRR4302543.2639799/1‑94 (MQ=60)

                                                                                            AGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTAT   <  SRR4302543.2894479/94‑1 (MQ=60)

                                                                                            AGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTAT   >  SRR4302543.4866460/1‑94 (MQ=60)

                                                                                            AGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTAT   <  SRR4302543.4903039/94‑1 (MQ=60)

                                                                                            AGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTAT   <  SRR4302543.2561431/94‑1 (MQ=60)

                                                                                             GTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTATC  <  SRR4302543.2264514/94‑1 (MQ=60)

GCCAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTATC  >  NC_000913/4081623‑4081809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`