Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,081,716 |
A→G |
F563L (TTC→CTC) |
fdoG ← |
formate dehydrogenase‑O, major subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,081,716 | 0 | A | G | 100.0%
| 661.7
/ NA
| 208 | F563L (TTC→CTC) | fdoG | formate dehydrogenase‑O, major subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (86/122); total (86/122) |
Only 100 of 212 total aligned reads displayed.
AGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTT > NC_000913/4081626‑4081805
|
gAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGa < 2:3271749/93‑1 (MQ=255)
gAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGa < 2:276544/93‑1 (MQ=255)
aaGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAg < 2:2936943/93‑1 (MQ=255)
gTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGc < 2:3977149/93‑1 (MQ=255)
gTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGc > 2:1785716/1‑93 (MQ=255)
ttAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCa > 1:95184/1‑93 (MQ=255)
tAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCaa < 2:4006257/93‑1 (MQ=255)
tAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCaa < 1:1895398/93‑1 (MQ=255)
gagGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACa > 1:3853984/1‑93 (MQ=255)
agGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAg < 1:3467118/93‑1 (MQ=255)
ggTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAgg < 1:653260/93‑1 (MQ=255)
gTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAggg < 2:3819954/93‑1 (MQ=255)
gTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAggg > 2:3047130/1‑93 (MQ=255)
ttcagtgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGtt < 2:4517620/93‑1 (MQ=255)
tcagtgttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTGGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCCACAGGGTTa > 1:300383/1‑93 (MQ=255)
gttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGcc > 1:2225128/1‑93 (MQ=255)
ttcagtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGGTTTTGTTCGGGAGTGAGGCAACAGAGCTAAAGacc > 2:1527788/1‑93 (MQ=255)
agtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTgg > 2:2883871/1‑93 (MQ=255)
agtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTgg < 1:2299946/93‑1 (MQ=255)
gtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGc < 2:1345903/93‑1 (MQ=255)
gtgGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGc < 1:1148376/93‑1 (MQ=255)
gggTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAg < 2:1281577/93‑1 (MQ=255)
gggTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAg < 1:421080/93‑1 (MQ=255)
ggTCGATGGTGACGAGGAACTTCAGTTGCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGa < 1:1696629/93‑1 (MQ=255)
gTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGat < 2:2006623/93‑1 (MQ=255)
gTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGat < 2:4108032/93‑1 (MQ=255)
tCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCTATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGata < 1:1423627/93‑1 (MQ=255)
tCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCACCAGGGTTAAAGCCCTGGCAGata < 2:587998/93‑1 (MQ=255)
tCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGata < 2:1202984/93‑1 (MQ=255)
gATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGAtata < 2:2457447/93‑1 (MQ=255)
gATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGAtata < 1:1815442/93‑1 (MQ=255)
tGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGc > 1:4575692/1‑93 (MQ=255)
tGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGc < 1:557469/93‑1 (MQ=255)
gTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCACCAGGGTTAAAGCCCTGGCAGATATAGCCa > 2:2240377/1‑93 (MQ=255)
gTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCa < 2:3869171/93‑1 (MQ=255)
gACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAtt < 1:4237748/93‑1 (MQ=255)
gACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCAtt < 2:713346/93‑1 (MQ=255)
cGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGa < 2:3936608/93‑1 (MQ=255)
cGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGa > 2:4285764/1‑93 (MQ=255)
gAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAc < 1:2771361/93‑1 (MQ=255)
gAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAc > 1:3143412/1‑93 (MQ=255)
aGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAcc < 1:350257/93‑1 (MQ=255)
ggAACTTCAGTTTCGACAGACAACCGATCGCTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGCCCt < 1:642572/93‑1 (MQ=255)
ggAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCt < 1:2759577/93‑1 (MQ=255)
ggAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCt < 1:1098130/93‑1 (MQ=255)
ggAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCt < 1:3806231/93‑1 (MQ=255)
aaCTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTg > 2:1567600/1‑93 (MQ=255)
cTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGcc > 2:3229098/1‑93 (MQ=255)
cTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGcc > 1:2973224/1‑93 (MQ=255)
ttCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGccc > 2:3027437/1‑93 (MQ=255)
ttCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGccc < 2:112242/93‑1 (MQ=255)
ttCAGTTTCGAAAGACAACCGATAACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGCTAAAGCCCTGGCAGATATAGCCATTGACCTTGcac > 2:1483746/1‑91 (MQ=255)
tCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCct > 1:472441/1‑93 (MQ=255)
aGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCctct > 2:2658223/1‑93 (MQ=255)
gTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCtt < 1:2619077/93‑1 (MQ=255)
ttCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTtc < 1:3249643/93‑1 (MQ=255)
ttCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTtc < 2:230218/93‑1 (MQ=255)
tCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTtca < 2:3739360/93‑1 (MQ=255)
gacagacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTtcatc > 1:2476991/1‑93 (MQ=255)
gacagacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTtcatc < 2:1997341/93‑1 (MQ=255)
gacagacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTCGCAGATATAGCCATTGACCTTGCCCTCTTtcatc > 1:184989/1‑93 (MQ=255)
acagacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTtcatca < 1:1411564/93‑1 (MQ=255)
acagacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTtcatca < 2:3415421/93‑1 (MQ=255)
cagacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTcatcat > 1:2576816/1‑93 (MQ=255)
cagacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTcatcat > 2:4406589/1‑93 (MQ=255)
cagacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTcatcat > 2:2079988/1‑93 (MQ=255)
agacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCatcatc < 2:4667281/93‑1 (MQ=255)
agacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCatcatc < 2:817503/93‑1 (MQ=255)
gacaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAAATATAGCCATTGACCTTGCCCTCTTTCATCAtct > 2:3640093/1‑93 (MQ=255)
acaACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCAtctc > 2:3585247/1‑93 (MQ=255)
aaCCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGa > 1:2159257/1‑93 (MQ=255)
aCCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGaa < 2:1053258/93‑1 (MQ=255)
cGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGt < 1:195577/93‑1 (MQ=255)
cGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGt < 1:2431007/93‑1 (MQ=255)
cGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGt < 1:89781/93‑1 (MQ=255)
gATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTa > 1:4261643/1‑93 (MQ=255)
gATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTa < 2:3846306/93‑1 (MQ=255)
aTCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAt < 2:165144/93‑1 (MQ=255)
tCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTAtt < 1:823158/93‑1 (MQ=255)
cACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTg > 1:526355/1‑93 (MQ=255)
cACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTg < 2:2725837/93‑1 (MQ=255)
aCTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGc < 1:679469/93‑1 (MQ=255)
aCTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGc > 1:2375597/1‑93 (MQ=255)
cTTTGTTTTTGTTCGGGAGTGAGGCAACAGGTTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCa < 1:981846/93‑1 (MQ=255)
tttgtttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAg > 1:338632/1‑93 (MQ=255)
ttgtttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAgg < 1:3415567/93‑1 (MQ=255)
tgtttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGa < 2:4589064/93‑1 (MQ=255)
tgtttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGa < 1:4313490/93‑1 (MQ=255)
tttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAcg > 2:3558437/1‑93 (MQ=255)
ttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAcgt < 2:2318459/93‑1 (MQ=255)
ttttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAcgt > 1:1324414/1‑93 (MQ=255)
tttgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAcgtc < 2:3115696/93‑1 (MQ=255)
tgttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAcgtcgt < 2:1166500/93‑1 (MQ=255)
gttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTa < 1:4594186/93‑1 (MQ=255)
ttCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAg > 1:3683455/1‑93 (MQ=255)
tCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGc > 2:741798/1‑93 (MQ=255)
tCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGc > 1:1000933/1‑93 (MQ=255)
tCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGc < 1:4027679/93‑1 (MQ=255)
cGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCGTCATCTCGAAGCATTGCAGGACGGCGTAggc > 2:2985814/1‑91 (MQ=38)
ggAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCtt < 1:4462292/93‑1 (MQ=255)
|
AGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTT > NC_000913/4081626‑4081805
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTAT > NC_000913/4081624‑4081808
|
CCAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGT < SRR4302535.3867128/94‑1 (MQ=60)
CAGAAGTTTGATGTTTCAGTGTTCATTCGGTCGATGGTGACGAGGAACTTCAGTTCCGACAGACAACCGATCCCTTTGTTTTTGTTCGGGAGTG < SRR4302535.1203605/94‑1 (MQ=60)
CAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTG < SRR4302535.2480193/94‑1 (MQ=60)
CAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTG < SRR4302535.511955/94‑1 (MQ=60)
AGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGA > SRR4302535.545014/1‑94 (MQ=60)
GAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAG < SRR4302535.2190166/94‑1 (MQ=60)
AGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGC > SRR4302535.3941177/1‑94 (MQ=60)
GTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCA > SRR4302535.95861/1‑94 (MQ=60)
GTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCA > SRR4302535.2477643/1‑94 (MQ=60)
TAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAAC < SRR4302535.1909037/94‑1 (MQ=60)
AGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACA < SRR4302535.973773/94‑1 (MQ=60)
AGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACA < SRR4302535.1845208/94‑1 (MQ=60)
AGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACA > SRR4302535.3880524/1‑94 (MQ=60)
AGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGG > SRR4302535.3145125/1‑94 (MQ=60)
AGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGG < SRR4302535.2602527/94‑1 (MQ=60)
AGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGG < SRR4302535.3491212/94‑1 (MQ=60)
GGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGG < SRR4302535.657820/94‑1 (MQ=60)
AGTTTCACTGTACAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGG < SRR4302535.1390682/94‑1 (MQ=60)
TTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTGGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCCACAGGGTTA > SRR4302535.302475/1‑94 (MQ=60)
TTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTA < SRR4302535.904135/94‑1 (MQ=60)
TCAGTGTGCAGTGGGTCAATGGTGACGAGGAAGTTCAGTTTCGACAGACAACCGATCCCGTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAA < SRR4302535.352523/94‑1 (MQ=60)
AGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAG < SRR4302535.3468421/94‑1 (MQ=60)
GTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGC > SRR4302535.653908/1‑94 (MQ=60)
TGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCC > SRR4302535.2240961/1‑94 (MQ=60)
TTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCT < SRR4302535.2591619/94‑1 (MQ=60)
TTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCT < SRR4302535.615534/94‑1 (MQ=60)
TTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCT < SRR4302535.297753/94‑1 (MQ=60)
CAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGG < SRR4302535.4335094/94‑1 (MQ=60)
AGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGC < SRR4302535.2316404/94‑1 (MQ=60)
GTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCA < SRR4302535.1156556/94‑1 (MQ=60)
GGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGA < SRR4302535.424020/94‑1 (MQ=60)
GGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGA < SRR4302535.1312222/94‑1 (MQ=60)
GGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGAT < SRR4302535.479244/94‑1 (MQ=60)
GGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGAT < SRR4302535.4270038/94‑1 (MQ=60)
GGTCGATGGTGACGAGGAACTTCAGTTGCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGAT < SRR4302535.1708893/94‑1 (MQ=60)
TCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCTATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATAT < SRR4302535.1433792/94‑1 (MQ=60)
TCGATGATGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATAT < SRR4302535.4526982/94‑1 (MQ=60)
GATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAG > SRR4302535.385220/1‑94 (MQ=60)
GATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAG < SRR4302535.1828567/94‑1 (MQ=60)
ATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGC > SRR4302535.4606873/1‑94 (MQ=60)
TGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCC < SRR4302535.561373/94‑1 (MQ=60)
GACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTG < SRR4302535.4266748/94‑1 (MQ=60)
CGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAC < SRR4302535.37188/94‑1 (MQ=60)
CGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGAC > SRR4302535.3165279/1‑94 (MQ=60)
GAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACC < SRR4302535.2791097/94‑1 (MQ=60)
GAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACC > SRR4302535.3579395/1‑94 (MQ=60)
AGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCT < SRR4302535.352671/94‑1 (MQ=60)
AGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCT > SRR4302535.1503615/1‑94 (MQ=60)
GGAACTTCAGTTTCGACAGACAACCGATCGCTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGCCCTT < SRR4302535.647060/94‑1 (MQ=60)
GGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTT < SRR4302535.3832475/94‑1 (MQ=60)
GGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTT < SRR4302535.1105946/94‑1 (MQ=60)
GGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTT < SRR4302535.2779244/94‑1 (MQ=60)
GAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTG > SRR4302535.1426481/1‑94 (MQ=60)
ACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCC > SRR4302535.2994094/1‑94 (MQ=60)
CTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCC > SRR4302535.2134283/1‑94 (MQ=60)
TTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCT > SRR4302535.475749/1‑94 (MQ=60)
CAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCT > SRR4302535.3298971/1‑94 (MQ=60)
GTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTT < SRR4302535.2637855/94‑1 (MQ=60)
GTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTT > SRR4302535.1922684/1‑94 (MQ=60)
TTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCA < SRR4302535.3272221/94‑1 (MQ=60)
CGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATC > SRR4302535.2494856/1‑94 (MQ=60)
CGACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTCGCAGATATAGCCATTGACCTTGCCCTCTTTCATC > SRR4302535.186265/1‑94 (MQ=60)
ACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCAT > SRR4302535.2595336/1‑94 (MQ=60)
ACAGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCAT < SRR4302535.1421641/94‑1 (MQ=60)
AGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCT > SRR4302535.3416424/1‑94 (MQ=60)
AGACAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCT < SRR4302535.2785710/94‑1 (MQ=60)
CAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGA > SRR4302535.2174768/1‑94 (MQ=60)
CAACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGA > SRR4302535.2656470/1‑94 (MQ=60)
AACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAA < SRR4302535.4625010/94‑1 (MQ=60)
AACCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAA > SRR4302535.4428986/1‑94 (MQ=60)
CCGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGT > SRR4302535.676455/1‑94 (MQ=60)
CGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTA < SRR4302535.196922/94‑1 (MQ=60)
CGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTA < SRR4302535.90413/94‑1 (MQ=60)
CGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTA < SRR4302535.2448520/94‑1 (MQ=60)
CGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTA > SRR4302535.3011925/1‑94 (MQ=60)
CGATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTA > SRR4302535.4290831/1‑94 (MQ=60)
ATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATT < SRR4302535.1032322/94‑1 (MQ=60)
ATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATT > SRR4302535.1123205/1‑94 (MQ=60)
ATCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATT > SRR4302535.2277803/1‑94 (MQ=60)
TCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTG < SRR4302535.828928/94‑1 (MQ=60)
TCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTG < SRR4302535.770791/94‑1 (MQ=60)
TCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTG > SRR4302535.2500166/1‑94 (MQ=60)
TCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTG > SRR4302535.530030/1‑94 (MQ=60)
TCACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGACCTCTTTCATCATCTCGAAGTATTG > SRR4302535.1896911/1‑94 (MQ=60)
CACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGC > SRR4302535.1901801/1‑94 (MQ=60)
CACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGC > SRR4302535.2392664/1‑94 (MQ=60)
ACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCA < SRR4302535.4261252/94‑1 (MQ=60)
ACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCA > SRR4302535.1817455/1‑94 (MQ=60)
ACTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCA < SRR4302535.684226/94‑1 (MQ=60)
CTTTGTTTTTGTTCGGGAGTGAGGCAACAGGTTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAG < SRR4302535.988825/94‑1 (MQ=60)
CTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCGGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAG < SRR4302535.4259834/94‑1 (MQ=60)
CTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAG > SRR4302535.340977/1‑94 (MQ=60)
CTTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAG < SRR4302535.4645026/94‑1 (MQ=60)
TTTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGG < SRR4302535.955008/94‑1 (MQ=60)
TTGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGA < SRR4302535.3439325/94‑1 (MQ=60)
TGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAC > SRR4302535.4129894/1‑94 (MQ=60)
TGTTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGAC < SRR4302535.4342995/94‑1 (MQ=60)
TTTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGT > SRR4302535.1333866/1‑94 (MQ=60)
TTTTGTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTC < SRR4302535.3281834/94‑1 (MQ=60)
GTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAG < SRR4302535.4625451/94‑1 (MQ=60)
GTTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAG > SRR4302535.3708943/1‑94 (MQ=60)
GTACGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAG < SRR4302535.2344621/94‑1 (MQ=60)
TTCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGC > SRR4302535.1008047/1‑94 (MQ=60)
TCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCC < SRR4302535.4055238/94‑1 (MQ=60)
TCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCC > SRR4302535.550359/1‑94 (MQ=60)
TCGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCC > SRR4302535.324370/1‑94 (MQ=60)
CGGGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCT > SRR4302535.2445018/1‑94 (MQ=60)
GGAGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTT < SRR4302535.4492896/94‑1 (MQ=60)
AGTGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTAT < SRR4302535.3578135/94‑1 (MQ=60)
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CCAGAAGTTAGAGGTTTCAGTGTTCAGTGGGTCGATGGTGACGAGGAACTTCAGTTTCGACAGACAACCGATCACTTTGTTTTTGTTCGGGAATGAGGCAACAGGGTTAAAGCCCTGGCAGATATAGCCATTGACCTTGCCCTCTTTCATCATCTCGAAGTATTGCAGGACGTCGTAGCCTTTAT > NC_000913/4081624‑4081808
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
