Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,095,111 G→A intergenic (‑82/‑206) rhaB ← / → rhaS rhamnulokinase/RhaS

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,095,1110GA99.5% 1408.3 / ‑4.8 391intergenic (‑82/‑206)rhaB/rhaSrhamnulokinase/RhaS
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base A (219/170);  total (219/172)
Fisher's exact test for biased strand distribution p-value = 1.93e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01

Only 100 of 394 total aligned reads displayed.

AAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAAT  >  NC_000913/4095022‑4095200
                                                                                         |                                                                                         
gtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGcc                                                                                        >  1:6219412‑M2/12‑93 (MQ=255)
gtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGcc                                                                                        >  2:2604682‑M2/12‑93 (MQ=255)
gtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGcc                                                                                        <  2:5380710‑M2/82‑1 (MQ=255)
 tcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCa                                                                                       >  2:2227569‑M2/11‑93 (MQ=255)
 tcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCa                                                                                       >  2:740849‑M2/11‑93 (MQ=255)
  cgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCAt                                                                                      <  2:1266378‑M2/84‑1 (MQ=255)
   gacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCAtt                                                                                     <  2:2889502‑M2/85‑1 (MQ=255)
   gacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCAtt                                                                                     <  1:5322108‑M2/85‑1 (MQ=255)
   gacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCAtt                                                                                     >  2:4253499‑M2/9‑93 (MQ=255)
     catatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTgg                                                                                   <  1:298580‑M2/87‑1 (MQ=255)
      atatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATtgga                                                                                  >  2:4872017‑M2/6‑92 (MQ=255)
         tgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAAc                                                                               >  1:1971275‑M2/3‑93 (MQ=255)
         tgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAAc                                                                               <  2:1483558‑M2/91‑1 (MQ=255)
           gtgATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCa                                                                             >  2:7621768/1‑93 (MQ=255)
           gtgATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCa                                                                             >  1:7663179/1‑93 (MQ=255)
             gagccTGCTGAATTTCATTACGTCCAGTCTAAAAAGCACCTGAATTCGCGCCCTTCTCGTAACGGACAGGAAAATGAGCCATTGGCAACCAgg                                                                           <  2:4742699/90‑1 (MQ=255)
             gATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAgg                                                                           <  2:4156451/93‑1 (MQ=255)
              aTCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAggg                                                                          >  1:2569894/1‑93 (MQ=255)
              aTCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAggg                                                                          >  2:5756897/1‑93 (MQ=255)
                ccTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGaa                                                                        <  1:6753188/93‑1 (MQ=255)
                ccTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGaa                                                                        <  1:3140117/93‑1 (MQ=255)
                 ctgctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGaaa                                                                       >  1:504153/1‑93 (MQ=255)
                 ctgctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGaaa                                                                       <  1:1112672/93‑1 (MQ=255)
                 ctgctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGaaa                                                                       >  1:4755130/1‑93 (MQ=255)
                 ctgctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGaaa                                                                       <  1:2279403/93‑1 (MQ=255)
                  tgctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAg                                                                      >  1:1845518/1‑93 (MQ=255)
                  tgctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAg                                                                      >  2:2530349/1‑93 (MQ=255)
                   gctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGa                                                                     <  2:6829981/93‑1 (MQ=255)
                   gctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGa                                                                     >  1:7389175/1‑93 (MQ=255)
                   gctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGa                                                                     <  1:6773534/93‑1 (MQ=255)
                    ctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGAt                                                                    <  2:7715762/93‑1 (MQ=255)
                      gAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGa                                                                  <  1:439033/93‑1 (MQ=255)
                      gAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGAAACCAGGGAAAGAtaa                                                                  >  1:2743175/1‑91 (MQ=255)
                       aaTTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGaa                                                                 <  2:3592994/93‑1 (MQ=255)
                        aTTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAAc                                                                >  2:3212656/1‑93 (MQ=255)
                        aTTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAAc                                                                <  1:5726001/93‑1 (MQ=255)
                         tttCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACg                                                               >  2:5470010/1‑93 (MQ=255)
                          ttCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGt                                                              <  2:2113133/93‑1 (MQ=255)
                          ttCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGt                                                              <  1:10635/93‑1 (MQ=255)
                            cATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGtga                                                            >  2:7095744/1‑93 (MQ=255)
                               tACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGtgatga                                                         <  1:7890806/93‑1 (MQ=255)
                                 cGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGatgatg                                                       <  1:3250227/93‑1 (MQ=255)
                                  gACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGt                                                      <  1:6281008/93‑1 (MQ=255)
                                  gACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGt                                                      >  1:3599979/1‑93 (MQ=255)
                                   aCCAGTCTAAAAAGCGCCTGAATTCGCGACCTGCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGtt                                                     <  1:965667/93‑1 (MQ=255)
                                    ccAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTc                                                    >  1:7555072/1‑93 (MQ=255)
                                    ccAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGAAACCAGGGAAAGATGAACGTGATGATGtta                                                    >  1:6629746/1‑92 (MQ=255)
                                     cAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTca                                                   <  2:5887805/93‑1 (MQ=255)
                                      aGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTcac                                                  <  1:2078284/93‑1 (MQ=255)
                                        tCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACaa                                                >  1:1000368/1‑93 (MQ=255)
                                        tCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACaa                                                >  2:6317266/1‑93 (MQ=255)
                                           aaaaaGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAAttt                                             >  2:7164450/1‑93 (MQ=255)
                                            aaaaGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAAtttt                                            >  2:4039085/1‑92 (MQ=255)
                                              aaGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCt                                          <  2:3867610/93‑1 (MQ=255)
                                              aaGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCt                                          <  2:4344997/93‑1 (MQ=255)
                                               aGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTg                                         <  2:5221428/93‑1 (MQ=255)
                                               aGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTg                                         <  1:6926522/93‑1 (MQ=255)
                                                  gcCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAt                                      <  1:4210213/93‑1 (MQ=255)
                                                   ccTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAtt                                     <  1:4498135/93‑1 (MQ=255)
                                                   ccTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAtt                                     >  2:2364029/1‑93 (MQ=255)
                                                   ccTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAtt                                     >  1:4610742/1‑93 (MQ=255)
                                                    cTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATtg                                    <  1:3378709/93‑1 (MQ=255)
                                                    cTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATtg                                    >  2:4621940/1‑93 (MQ=255)
                                                     tGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATtgt                                   >  2:7369692/1‑93 (MQ=255)
                                                     tGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATtgt                                   >  1:5130301/1‑93 (MQ=255)
                                                       aaTTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTgtgg                                 <  2:6130903/93‑1 (MQ=255)
                                                        aTTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTgtggt                                >  2:3031889/1‑93 (MQ=255)
                                                         ttCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTgtggtg                               >  1:3550239/1‑93 (MQ=255)
                                                          tCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtga                              <  1:1525899/93‑1 (MQ=255)
                                                           cgcgACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgat                             <  2:4455216/93‑1 (MQ=255)
                                                           cgcgACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgat                             <  1:1714808/93‑1 (MQ=255)
                                                           cgcgACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgat                             <  2:2394873/93‑1 (MQ=255)
                                                             cgACCTTCTCGTTACTGACAGGAAGATGAGCCATTGGCAACCAGGGAAAGATGAACGCGATGATGTTCACAATTTGCTGAATTGTGgtgatgt                           <  2:7798037/93‑1 (MQ=255)
                                                             cgACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatgt                           <  2:348366/93‑1 (MQ=255)
                                                              gACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatgtg                          >  1:3803139/1‑93 (MQ=255)
                                                               aCCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatgtga                         <  1:3100085/93‑1 (MQ=255)
                                                               aCCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatgtga                         <  1:429569/93‑1 (MQ=255)
                                                               aCCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatgtga                         <  2:6976822/93‑1 (MQ=255)
                                                               aCCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatgtga                         <  2:6494560/93‑1 (MQ=255)
                                                               aCCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatgtga                         <  2:11791/93‑1 (MQ=255)
                                                               aCCTTCTCGTTACAGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATAAACGTGATGATGTGCACAAGTGGCGGAATTGGggtgaggtga                         >  1:6021688/1‑93 (MQ=255)
                                                                ccTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatgtgat                        >  2:1668325/1‑93 (MQ=255)
                                                                 cTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGtgatgtgatg                       >  2:114359/1‑93 (MQ=255)
                                                                  ttCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGc                      >  2:3394802/1‑93 (MQ=255)
                                                                     ctgTTGCTGACAGGAAAATGAGCCAGTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGCATTGTGGTGATGTGATGCTCa                   <  1:1361664/91‑1 (MQ=255)
                                                                      cGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCAc                  >  1:6124530/1‑93 (MQ=255)
                                                                       gTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCAcc                 <  1:7729699/93‑1 (MQ=255)
                                                                       gTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCAcc                 >  2:5207252/1‑93 (MQ=255)
                                                                       gTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCAcc                 >  2:3171611/1‑93 (MQ=255)
                                                                       gTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCAcc                 <  1:233061/93‑1 (MQ=255)
                                                                        ttACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCg                <  1:5491781/93‑1 (MQ=255)
                                                                          aCTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCa              <  2:5105734/93‑1 (MQ=255)
                                                                          aCTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCa              <  2:5051297/93‑1 (MQ=255)
                                                                            tGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCAtt            <  1:813152/93‑1 (MQ=255)
                                                                            tGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCAtt            >  2:3767699/1‑93 (MQ=255)
                                                                            tGACAGGAAAAGGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCAtt            <  2:5655473/93‑1 (MQ=255)
                                                                              aCAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCAttta          <  2:2645182/93‑2 (MQ=255)
                                                                                aGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCt        <  1:6555880/93‑1 (MQ=255)
                                                                                     aaTGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGaaaa   <  2:1922138/93‑1 (MQ=255)
                                                                                     aaTGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGaaaa   >  1:3915958/1‑93 (MQ=255)
                                                                                         |                                                                                         
AAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAAT  >  NC_000913/4095022‑4095200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 206 total aligned reads displayed.
GCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCAC  >  NC_000913/4095018‑4095204
                                                                                             |                                                                                             
tagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGA                                                                                               <  SRR4302543.5044218/79‑1 (MQ=60)
tagagtcgacagatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGA                                                                                               <  SRR4302543.7623508/79‑1 (MQ=60)
 agagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAG                                                                                              >  SRR4302543.6693424/15‑94 (MQ=60)
 agagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAG                                                                                              >  SRR4302543.6806915/15‑94 (MQ=60)
   agtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCC                                                                                            >  SRR4302543.6278123/13‑94 (MQ=60)
      cgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACATGAAAATGAGCCATT                                                                                         >  SRR4302543.7296168/10‑94 (MQ=60)
       gacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTG                                                                                        <  SRR4302543.5370218/86‑1 (MQ=60)
       gacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTG                                                                                        <  SRR4302543.4264628/86‑1 (MQ=60)
       gacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTG                                                                                        <  SRR4302543.3612835/86‑1 (MQ=60)
       gacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTG                                                                                        >  SRR4302543.5837482/9‑94 (MQ=60)
        acatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGG                                                                                       <  SRR4302543.5136306/87‑1 (MQ=60)
         CATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGC                                                                                      <  SRR4302543.301259/94‑1 (MQ=60)
          atatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCA                                                                                     <  SRR4302543.3739912/89‑1 (MQ=60)
          atatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCA                                                                                     >  SRR4302543.3132888/6‑94 (MQ=60)
          atatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCA                                                                                     >  SRR4302543.2950966/6‑94 (MQ=60)
            atgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGNNNNGAAAATGAGCNANTGGCNAN                                                                                   >  SRR4302543.1660854/4‑94 (MQ=60)
            atgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAAC                                                                                   >  SRR4302543.110667/4‑94 (MQ=60)
            atgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAAC                                                                                   >  SRR4302543.1988941/4‑94 (MQ=60)
            atgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAAC                                                                                   >  SRR4302543.4272310/4‑94 (MQ=60)
              GGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCA                                                                                 <  SRR4302543.5388892/94‑1 (MQ=60)
              GGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCA                                                                                 <  SRR4302543.7404660/94‑1 (MQ=60)
              GGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCA                                                                                 >  SRR4302543.7735814/1‑94 (MQ=60)
              GGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCA                                                                                 >  SRR4302543.7735813/1‑94 (MQ=60)
                 GATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGG                                                                              >  SRR4302543.2593344/1‑94 (MQ=60)
                 GATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGG                                                                              <  SRR4302543.962027/94‑1 (MQ=60)
                  ATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGA                                                                             <  SRR4302543.2258269/94‑1 (MQ=60)
                  ATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGA                                                                             >  SRR4302543.7611732/1‑94 (MQ=60)
                  ATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGA                                                                             >  SRR4302543.3274869/1‑94 (MQ=60)
                  ATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGA                                                                             >  SRR4302543.1087108/1‑94 (MQ=60)
                  ATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGA                                                                             >  SRR4302543.1087107/1‑94 (MQ=60)
                  ATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGA                                                                             <  SRR4302543.3916038/94‑1 (MQ=60)
                  ATCCTGCTGAATGTCATTACGACCAGTCGAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGA                                                                             <  SRR4302543.2041254/94‑1 (MQ=60)
                    CCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAA                                                                           >  SRR4302543.508836/1‑94 (MQ=60)
                    CCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAA                                                                           <  SRR4302543.3168359/94‑1 (MQ=60)
                    CCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAA                                                                           >  SRR4302543.3178316/1‑94 (MQ=60)
                    CCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAA                                                                           <  SRR4302543.6816964/94‑1 (MQ=60)
                    CCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAA                                                                           <  SRR4302543.6816966/94‑1 (MQ=60)
                    CCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAA                                                                           >  SRR4302543.7969781/1‑94 (MQ=60)
                    CCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAA                                                                           >  SRR4302543.4798586/1‑94 (MQ=60)
                     CTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAG                                                                          <  SRR4302543.2300245/94‑1 (MQ=60)
                     CTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAG                                                                          <  SRR4302543.1122730/94‑1 (MQ=60)
                     CTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAG                                                                          >  SRR4302543.6236290/1‑94 (MQ=60)
                     CTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAG                                                                          >  SRR4302543.1862114/1‑94 (MQ=60)
                      TGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGA                                                                         >  SRR4302543.7460161/1‑94 (MQ=60)
                       GCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGAT                                                                        <  SRR4302543.6837522/94‑1 (MQ=60)
                       GCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGAT                                                                        <  SRR4302543.3551461/94‑1 (MQ=60)
                        CTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATG                                                                       >  SRR4302543.3810644/1‑94 (MQ=60)
                        CTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATG                                                                       <  SRR4302543.2423755/94‑1 (MQ=60)
                        CTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATG                                                                       <  SRR4302543.3453826/94‑1 (MQ=60)
                         TGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGA                                                                      >  SRR4302543.6331448/1‑94 (MQ=60)
                         TGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGAAACCAGGGAAAGATAA                                                                      >  SRR4302543.2768118/1‑94 (MQ=60)
                          GAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATcac                                                                     >  SRR4302543.4574097/1‑91 (MQ=60)
                          GAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAA                                                                     <  SRR4302543.443145/94‑1 (MQ=60)
                          GAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAA                                                                     >  SRR4302543.2658193/1‑94 (MQ=60)
                           AATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAAC                                                                    >  SRR4302543.1236541/1‑94 (MQ=60)
                           AATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAAC                                                                    >  SRR4302543.4400783/1‑94 (MQ=60)
                            ATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACG                                                                   >  SRR4302543.1993347/1‑94 (MQ=60)
                            ATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACG                                                                   <  SRR4302543.5778250/94‑1 (MQ=60)
                            ATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACG                                                                   <  SRR4302543.7879470/94‑1 (MQ=60)
                              TTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTG                                                                 <  SRR4302543.10727/94‑1 (MQ=60)
                              TTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTG                                                                 >  SRR4302543.1807726/1‑94 (MQ=60)
                               TCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGA                                                                >  SRR4302543.6821694/1‑94 (MQ=60)
                                CATTACGACCAGTCTAAAAAGTGCCTGAATTCGCGACCTTCTCGTTACTGACCGGAAAATGAGCCATTGGCCACCAGGCAAAGATGCGCGTGAT                                                               >  SRR4302543.508509/1‑94 (MQ=60)
                                CATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGAT                                                               <  SRR4302543.2035046/94‑1 (MQ=60)
                                 ATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATG                                                              <  SRR4302543.608177/94‑1 (MQ=60)
                                   TACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGAT                                                            <  SRR4302543.3153373/94‑1 (MQ=60)
                                   TACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGAT                                                            <  SRR4302543.7965014/94‑1 (MQ=60)
                                   TACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGAT                                                            >  SRR4302543.1045174/1‑94 (MQ=60)
                                   TACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGAT                                                            <  SRR4302543.888621/94‑1 (MQ=60)
                                    ACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAACGATGAACGTGATactg                                                           >  SRR4302543.4280205/1‑90 (MQ=60)
                                    ACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATG                                                           <  SRR4302543.7863321/94‑1 (MQ=60)
                                    ACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATG                                                           <  SRR4302543.39199/94‑1 (MQ=60)
                                     CGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGT                                                          >  SRR4302543.5640498/1‑94 (MQ=60)
                                     CGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGT                                                          <  SRR4302543.3601777/94‑1 (MQ=60)
                                     CGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGT                                                          >  SRR4302543.3631750/1‑94 (MQ=60)
                                      GACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTT                                                         <  SRR4302543.6340197/94‑1 (MQ=60)
                                      GACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTT                                                         >  SRR4302543.2858396/1‑94 (MQ=60)
                                       ACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTC                                                        <  SRR4302543.8008513/94‑1 (MQ=60)
                                       ACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTC                                                        >  SRR4302543.7627013/1‑94 (MQ=60)
                                       ACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTC                                                        >  SRR4302543.6293417/1‑94 (MQ=60)
                                       ACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTC                                                        >  SRR4302543.6512404/1‑94 (MQ=60)
                                       ACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTC                                                        >  SRR4302543.7629154/1‑94 (MQ=60)
                                       ACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTC                                                        >  SRR4302543.7629153/1‑94 (MQ=60)
                                       ACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAAATGAACGTGATGATGTTC                                                        >  SRR4302543.6692290/1‑94 (MQ=60)
                                       ACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGAAACCAGGGAAAGATGAACGTGATGATGTTA                                                        >  SRR4302543.6692291/1‑94 (MQ=60)
                                       ACCAGTCTAAAAAGCGCCTGAATTCGCGACCTGCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTC                                                        <  SRR4302543.974146/94‑1 (MQ=60)
                                        CCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCA                                                       >  SRR4302543.7756858/1‑94 (MQ=60)
                                         CAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCAC                                                      >  SRR4302543.6951599/1‑94 (MQ=60)
                                         CAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCAA                                                      >  SRR4302543.6747749/1‑94 (MQ=60)
                                          AGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACA                                                     <  SRR4302543.668412/94‑1 (MQ=60)
                                          AGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACA                                                     <  SRR4302543.2096839/94‑1 (MQ=60)
                                          AGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATAAGCCATTGGCAACCAGGGAAAGATGAACGTAATGATGTTCACA                                                     >  SRR4302543.6278499/1‑94 (MQ=60)
                                           GTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAA                                                    <  SRR4302543.1420941/94‑1 (MQ=60)
                                           GTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAA                                                    >  SRR4302543.446258/1‑94 (MQ=60)
                                           GTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAA                                                    >  SRR4302543.1009206/1‑94 (MQ=60)
                                            TCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAAT                                                   >  SRR4302543.2367709/1‑94 (MQ=60)
                                            TCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAAT                                                   >  SRR4302543.7845816/1‑94 (MQ=60)
                                             CTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATT                                                  <  SRR4302543.3996405/94‑1 (MQ=60)
                                             CTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATT                                                  >  SRR4302543.5249163/1‑94 (MQ=60)
                                             CTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATT                                                  >  SRR4302543.306423/1‑94 (MQ=60)
                                               AAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTG                                                >  SRR4302543.4502743/1‑94 (MQ=60)
                                               AAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTG                                                <  SRR4302543.3369757/94‑1 (MQ=60)
                                                 AAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCT                                              <  SRR4302543.7584249/94‑1 (MQ=60)
                                                  AAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTG                                             <  SRR4302543.1690759/94‑1 (MQ=60)
                                                   AGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGA                                            >  SRR4302543.375368/1‑94 (MQ=60)
                                                   AGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGA                                            <  SRR4302543.6991648/94‑1 (MQ=60)
                                                    GCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAT                                           >  SRR4302543.1168831/1‑94 (MQ=60)
                                                     CGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAT                                          >  SRR4302543.5479060/1‑94 (MQ=60)
                                                     CGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAT                                          >  SRR4302543.3060041/1‑94 (MQ=60)
                                                     CGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAT                                          >  SRR4302543.2348695/1‑94 (MQ=60)
                                                     CGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAT                                          >  SRR4302543.1453500/1‑94 (MQ=60)
                                                      GCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATT                                         <  SRR4302543.7345223/94‑1 (MQ=60)
                                                      GCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATT                                         <  SRR4302543.7697062/94‑1 (MQ=60)
                                                      GCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATT                                         >  SRR4302543.1464385/1‑94 (MQ=60)
                                                      GCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATT                                         <  SRR4302543.4248384/94‑1 (MQ=60)
                                                      GCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATT                                         >  SRR4302543.4652624/1‑94 (MQ=60)
                                                       CCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTG                                        <  SRR4302543.6409820/94‑1 (MQ=60)
                                                       CCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTG                                        >  SRR4302543.1039144/1‑94 (MQ=60)
                                                       CCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTG                                        <  SRR4302543.4539017/94‑1 (MQ=60)
                                                        CTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGT                                       >  SRR4302543.1737348/1‑94 (MQ=60)
                                                        CTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGT                                       >  SRR4302543.171284/1‑94 (MQ=60)
                                                        CTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGT                                       <  SRR4302543.3409035/94‑1 (MQ=60)
                                                        CTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGT                                       >  SRR4302543.4462443/1‑94 (MQ=60)
                                                        CTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGT                                       >  SRR4302543.5176668/1‑94 (MQ=60)
                                                          GAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGG                                     <  SRR4302543.6928777/94‑1 (MQ=60)
                                                            ATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTG                                   <  SRR4302543.1979029/94‑1 (MQ=60)
                                                            ATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTG                                   >  SRR4302543.1288487/1‑94 (MQ=60)
                                                            ATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTG                                   >  SRR4302543.2604674/1‑94 (MQ=60)
                                                            ATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTG                                   >  SRR4302543.3581736/1‑94 (MQ=60)
                                                              TCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGAT                                 <  SRR4302543.801483/94‑1 (MQ=60)
                                                              TCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGAT                                 <  SRR4302543.1539596/94‑1 (MQ=60)
                                                               CGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATG                                <  SRR4302543.1730133/94‑1 (MQ=60)
                                                               CGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATG                                >  SRR4302543.4165734/1‑94 (MQ=60)
                                                                GCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTTAATTGTGGTGATGT                               >  SRR4302543.4728301/1‑94 (MQ=60)
                                                                GCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGT                               <  SRR4302543.3245625/94‑1 (MQ=60)
                                                                 CGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTG                              >  SRR4302543.4698425/1‑94 (MQ=60)
                                                                 CGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTG                              >  SRR4302543.3836650/1‑94 (MQ=60)
                                                                  GACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGT                             >  SRR4302543.6141480/1‑94 (MQ=60)
                                                                  GACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGT                             >  SRR4302543.2752489/1‑94 (MQ=60)
                                                                  GACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGA                             >  SRR4302543.2563706/1‑94 (MQ=60)
                                                                  GACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGA                             >  SRR4302543.6695582/1‑94 (MQ=60)
                                                                  GACCTTCTCGTTACAGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATAAACGTGATGATGTGCACAAGTGGCGGAATTGGGGTGAGGTGA                             >  SRR4302543.6077579/1‑94 (MQ=57)
                                                                   CCCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGAT                            <  SRR4302543.1777911/94‑1 (MQ=60)
                                                                   CCCTTCTCGTTACTGACAGGAAAATCAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGAT                            <  SRR4302543.3080124/94‑1 (MQ=60)
                                                                   ACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGAT                            <  SRR4302543.5167922/94‑1 (MQ=60)
                                                                   ACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGAT                            <  SRR4302543.3127973/94‑1 (MQ=60)
                                                                   ACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGAT                            <  SRR4302543.433595/94‑1 (MQ=60)
                                                                   ACCTTCGCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGAT                            <  SRR4302543.1866869/94‑1 (MQ=60)
                                                                    CCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATG                           <  SRR4302543.5186811/94‑1 (MQ=60)
                                                                    CCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATG                           >  SRR4302543.439348/1‑94 (MQ=60)
                                                                    CCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATG                           <  SRR4302543.6824892/94‑1 (MQ=60)
                                                                    CCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATG                           <  SRR4302543.4192064/94‑1 (MQ=60)
                                                                    CCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGGGGTGATGGGATG                           >  SRR4302543.439349/1‑94 (MQ=60)
                                                                    CCTGCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATG                           <  SRR4302543.6824894/94‑1 (MQ=60)
                                                                     CTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGC                          >  SRR4302543.1693873/1‑94 (MQ=60)
                                                                     CTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGC                          >  SRR4302543.5258539/1‑94 (MQ=60)
                                                                     CTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGC                          >  SRR4302543.1929240/1‑94 (MQ=60)
                                                                     CTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGC                          >  SRR4302543.3360400/1‑94 (MQ=60)
                                                                      TTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCT                         <  SRR4302543.4575144/94‑1 (MQ=60)
                                                                      TGCTCGTTACTGACAGTAAAATGAGCCATTGGCACCCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCT                         <  SRR4302543.4734498/94‑1 (MQ=60)
                                                                        CTCGTTACTGACAGAAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCA                       <  SRR4302543.2981930/94‑1 (MQ=60)
                                                                         ctgttgCTGACAGGAAAATGAGCCAGTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGCATTGTGGTGATGTGATGCTCAC                      <  SRR4302543.1373865/88‑1 (MQ=60)
                                                                         TCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCAC                      >  SRR4302543.6182534/1‑94 (MQ=60)
                                                                          CGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACC                     <  SRR4302543.3913511/94‑1 (MQ=60)
                                                                          CGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACC                     >  SRR4302543.3622297/1‑94 (MQ=60)
                                                                           GTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCG                    <  SRR4302543.235072/94‑1 (MQ=60)
                                                                           GTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCG                    <  SRR4302543.7802758/94‑1 (MQ=60)
                                                                           GTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCG                    >  SRR4302543.6688711/1‑94 (MQ=60)
                                                                            TTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGC                   <  SRR4302543.5541586/94‑1 (MQ=60)
                                                                             TACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCA                  >  SRR4302543.7760339/1‑94 (MQ=60)
                                                                             TACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCA                  >  SRR4302543.3134276/1‑94 (MQ=60)
                                                                               CTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATT                >  SRR4302543.5535692/1‑94 (MQ=60)
                                                                               CTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATT                >  SRR4302543.6003983/1‑94 (MQ=60)
                                                                                TGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTT               <  SRR4302543.820312/94‑1 (MQ=60)
                                                                                 GACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTNATGTGATGCTCACCGCATTTC              >  SRR4302543.869416/1‑94 (MQ=60)
                                                                                  ACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCC             <  SRR4302543.3448699/94‑1 (MQ=60)
                                                                                  ACAGCAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCC             <  SRR4302543.460511/94‑1 (MQ=60)
                                                                                   CAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCT            >  SRR4302543.5156863/1‑94 (MQ=60)
                                                                                   CAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTACCT            >  SRR4302543.2314689/1‑94 (MQ=60)
                                                                                    AGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTG           >  SRR4302543.6197371/1‑94 (MQ=60)
                                                                                    AGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTG           <  SRR4302543.6617574/94‑1 (MQ=60)
                                                                                     GGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGA          >  SRR4302543.7549639/1‑94 (MQ=60)
                                                                                      GAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAA         >  SRR4302543.4958576/1‑94 (MQ=60)
                                                                                      GAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAA         >  SRR4302543.6610059/1‑94 (MQ=60)
                                                                                      GAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAA         <  SRR4302543.6266089/94‑1 (MQ=60)
                                                                                      GAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAA         >  SRR4302543.2214304/1‑94 (MQ=60)
                                                                                       AAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAA        <  SRR4302543.5678200/94‑1 (MQ=60)
                                                                                        AAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAA       <  SRR4302543.231634/94‑1 (MQ=60)
                                                                                        AAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAA       >  SRR4302543.3950520/1‑94 (MQ=60)
                                                                                         AATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAAT      <  SRR4302543.4919045/94‑1 (MQ=60)
                                                                                         AATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAAT      <  SRR4302543.5593685/94‑1 (MQ=60)
                                                                                           TGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTC    >  SRR4302543.1313016/1‑94 (MQ=60)
                                                                                           TGAGCCATTGGCAACAAGGGAAAGATCGACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTC    <  SRR4302543.7353562/94‑1 (MQ=60)
                                                                                            GAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCA   <  SRR4302543.2588278/94‑1 (MQ=60)
                                                                                            GAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCA   >  SRR4302543.4965923/1‑94 (MQ=60)
                                                                                            GAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCA   >  SRR4302543.5252962/1‑94 (MQ=60)
                                                                                             AGCCATTGGCGACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCAC  <  SRR4302543.2183252/94‑1 (MQ=60)
                                                                                             AGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCAC  <  SRR4302543.2421004/94‑1 (MQ=60)
                                                                                             AGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCAC  >  SRR4302543.7137965/1‑94 (MQ=60)
                                                                                             AGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCAC  <  SRR4302543.6847747/94‑1 (MQ=60)
                                                                                             |                                                                                             
GCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAATTCAC  >  NC_000913/4095018‑4095204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑