Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,097,623	T→C	M162V (ATG→GTG)	rhaT ←	RhaT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,097,623	0	T	C	99.7%	994.4 / ‑5.5	319	M162V (ATG→GTG)	rhaT	RhaT
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (197/120); total (198/121)
Fisher's exact test for biased strand distribution p-value = 3.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 331 total aligned reads displayed.

TCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCT  >  NC_000913/4097533‑4097711

  gCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTg                                                                                      >  1:2594310/1‑93 (MQ=255)

    aaaGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTgcg                                                                                    >  2:3700133/1‑93 (MQ=255)

    aaaGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTgcg                                                                                    >  1:7861457/1‑93 (MQ=255)

     aaGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTcgcgt                                                                                   >  1:2295913/1‑92 (MQ=255)

     aaGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTgcgc                                                                                   >  1:4606708/1‑93 (MQ=255)

       ggACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGctc                                                                                 >  1:3941486/1‑93 (MQ=255)

       ggACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGctc                                                                                 <  1:1063764/93‑1 (MQ=255)

          cATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCttt                                                                              <  1:6969984/93‑1 (MQ=255)

           aTCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTc                                                                             <  1:977586/93‑1 (MQ=255)

           aTCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTc                                                                             <  2:2956678/93‑1 (MQ=255)

             cccGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCaa                                                                           <  1:2115246/93‑1 (MQ=255)

             cccGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCaa                                                                           <  1:2013007/93‑1 (MQ=255)

              ccGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAAc                                                                          <  1:5272424/93‑1 (MQ=255)

              ccGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAAc                                                                          <  1:1667313/93‑1 (MQ=255)

               cGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACt                                                                         >  2:7645094/1‑93 (MQ=255)

                 gCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCGCCTTGCGCTCTTTCAACTGc                                                                       <  1:5053874/93‑1 (MQ=255)

                  cAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGcc                                                                      <  2:5020182/93‑1 (MQ=255)

                   agagAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGccc                                                                     <  2:3746569/93‑1 (MQ=255)

                   agagAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGccc                                                                     <  1:262559/93‑1 (MQ=255)

                   agagAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGccc                                                                     >  1:6626738/1‑93 (MQ=255)

                    gagaAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCg                                                                    >  1:3524828/1‑93 (MQ=255)

                      gaAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGgc                                                                  >  2:5834218/1‑93 (MQ=255)

                       aaaaTGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGgcg                                                                 >  2:72417/1‑93 (MQ=255)

                         aaTGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGcgcg                                                               >  2:7825049/1‑93 (MQ=255)

                           tGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAg                                                             <  2:1080430/93‑1 (MQ=255)

                           tGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAg                                                             >  1:1171348/1‑93 (MQ=255)

                                  caTCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAAt                                                      >  1:6003525/1‑93 (MQ=255)

                                   aTCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTATTTCAACTGCCCGGCGCGAGTTACAATc                                                     >  1:4793764/1‑93 (MQ=255)

                                    tCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATcc                                                    >  2:6026316/1‑93 (MQ=255)

                                    tCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATcc                                                    >  1:2359419/1‑93 (MQ=255)

                                      aCCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCt                                                  <  2:3227461/93‑1 (MQ=255)

                                       ccGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTa                                                 <  1:4285873/93‑1 (MQ=255)

                                       ccGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTa                                                 <  2:6095111/93‑1 (MQ=255)

                                        cGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTAc                                                <  2:638165/93‑1 (MQ=255)

                                        cGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTAc                                                <  1:2684901/93‑1 (MQ=255)

                                        cGCCAGCACCAGCCCGTTTGTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGGGACAAACCCTAc                                                >  1:7027596/1‑93 (MQ=255)

                                        cGCCAACACCAGCCCTTTTTTCAGATTGACCTCTTCGGCTTTAATGCCCCCCTTGCGCTCTTTCAACTTCCCGGCGCGAGTTACAATCCCTAc                                                <  1:1801908/93‑1 (MQ=255)

                                         gCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACg                                               <  1:4107016/93‑1 (MQ=255)

                                           cAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGcc                                             <  2:2320020/93‑1 (MQ=255)

                                            aGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCa                                            >  2:551673/1‑93 (MQ=255)

                                             gCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCaa                                           <  1:1102531/93‑1 (MQ=255)

                                              cACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCact                                          >  1:7535396/1‑91 (MQ=255)

                                               aCCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATc                                         >  2:2199451/1‑93 (MQ=255)

                                               aCCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATc                                         >  1:4494536/1‑93 (MQ=255)

                                                ccAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCa                                        >  2:1323880/1‑93 (MQ=255)

                                                ccAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCa                                        >  2:5190106/1‑93 (MQ=255)

                                                 cAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAg                                       >  1:6785866/1‑93 (MQ=255)

                                                  aGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAgc                                      >  2:4097604/1‑93 (MQ=255)

                                                   gCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAgcg                                     >  2:4572014/1‑93 (MQ=255)

                                                   gCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCAACTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAgcg                                     >  2:7692473/1‑93 (MQ=255)

                                                     ccTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGcc                                   >  1:3628265/1‑93 (MQ=255)

                                                     ccTTTTTTCAAATTGATCTCTTCGGCTTTAATCCCCCCCGTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGcc                                   <  1:1092987/93‑1 (MQ=255)

                                                      cTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGcca                                  >  2:4279026/1‑93 (MQ=255)

                                                       ttttttCAGATTGAACTCTTCGGCTTTGATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGccac                                 >  2:3996293/1‑93 (MQ=255)

                                                       ttttttCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGccac                                 >  2:2548539/1‑93 (MQ=255)

                                                       ttttttCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGccac                                 >  2:7903193/1‑93 (MQ=255)

                                                       ttttttCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGccac                                 >  1:4350817/1‑93 (MQ=255)

                                                       ttttttCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGccac                                 >  1:7361876/1‑93 (MQ=255)

                                                          tttCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAg                              <  2:1682524/93‑1 (MQ=255)

                                                           ttCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGa                             <  1:5828045/93‑1 (MQ=255)

                                                            tCAGATTGACCTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGaa                            <  1:6917034/93‑1 (MQ=255)

                                                            tCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGaa                            <  1:3409553/93‑1 (MQ=255)

                                                               gATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGc                         >  2:5923384/1‑93 (MQ=255)

                                                               gATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGc                         >  2:6487783/1‑93 (MQ=255)

                                                               gATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGc                         >  2:4644664/1‑93 (MQ=255)

                                                               gATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGc                         >  1:6504315/1‑93 (MQ=255)

                                                                atggAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGcc                        <  1:622855/90‑1 (MQ=255)

                                                                 ttGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCg                       <  2:713779/93‑1 (MQ=255)

                                                                 ttGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCg                       >  2:7479407/1‑93 (MQ=255)

                                                                   gAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAg                     >  1:4911520/1‑93 (MQ=255)

                                                                     aCTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCa                   >  2:700987/1‑93 (MQ=255)

                                                                      ctctTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCaa                  <  1:6488118/93‑1 (MQ=255)

                                                                      ctctTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCaa                  <  1:3141768/93‑1 (MQ=255)

                                                                      ctctTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCaa                  <  1:7279629/93‑1 (MQ=255)

                                                                       tctTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGATACAATCCCTACGCCAATCAACGCCACCAGAACGCCGAGCAAc                 >  2:5581069/1‑93 (MQ=255)

                                                                        ctTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACg                >  2:2744114/1‑93 (MQ=255)

                                                                         ttCGGCTTTAATGCCCACCTTGCGCTCTTTCACCTGCCCGGCGCGAGTTACAATCCCTACGCCCATAAGCGCCACCAGAAAGCCGAGCAACGt               >  2:5148815/1‑93 (MQ=255)

                                                                         ttCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGt               >  1:880282/1‑93 (MQ=255)

                                                                          tCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTc              <  2:4868111/93‑1 (MQ=255)

                                                                           cGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCa             <  2:676272/93‑1 (MQ=255)

                                                                           cGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCa             >  1:538887/1‑93 (MQ=255)

                                                                           cGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCa             <  2:2024399/93‑1 (MQ=255)

                                                                           cGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCa             <  2:3515957/93‑1 (MQ=255)

                                                                           cGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCa             <  2:1502407/93‑1 (MQ=255)

                                                                           cGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCa             <  1:406624/93‑1 (MQ=255)

                                                                             gCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATg           >  1:1337904/1‑93 (MQ=255)

                                                                             gCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATg           <  1:7174927/93‑1 (MQ=255)

                                                                             gCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATg           >  2:1726914/1‑93 (MQ=255)

                                                                              cTTTGATGCCCACCTTGCGCTCTTTCAAGTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGACAGGc          >  2:7420023/1‑93 (MQ=255)

                                                                              cTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGc          >  1:515431/1‑93 (MQ=255)

                                                                              cTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGc          >  2:3353720/1‑93 (MQ=255)

                                                                               tttAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCg         >  1:2376359/1‑93 (MQ=255)

                                                                                 tAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTc       >  1:3765777/1‑93 (MQ=255)

                                                                                 tAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTc       >  1:2909268/1‑93 (MQ=255)

                                                                                  aaTGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTcc      <  1:1537757/93‑1 (MQ=255)

                                                                                   aTGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCg     >  2:4428762/1‑93 (MQ=255)

                                                                                   aTGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCg     >  2:2813807/1‑93 (MQ=255)

                                                                                    tGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGc    >  1:360289/1‑93 (MQ=255)

                                                                                     gCCCACCTTGCGCTCTTACAACTGCCCGGCGCGAGTTACAATCCCTCCGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGCACGcc   <  2:4905929/93‑1 (MQ=255)

                                                                                      cccACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCt  <  1:7729758/93‑1 (MQ=255)

TCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCT  >  NC_000913/4097533‑4097711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TCATCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTCGGT  >  NC_000913/4097530‑4097716

TCATCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCAC                                                                                               >  SRR4302543.5945499/1‑94 (MQ=60)

TCATCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCAC                                                                                               <  SRR4302543.1655395/94‑1 (MQ=60)

TCATCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCAC                                                                                               <  SRR4302543.7577701/94‑1 (MQ=60)

 CATCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACC                                                                                              >  SRR4302543.2004241/1‑94 (MQ=60)

 CATCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACC                                                                                              <  SRR4302543.7007940/94‑1 (MQ=60)

 CATCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACC                                                                                              <  SRR4302543.1424258/94‑1 (MQ=60)

  ATCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCT                                                                                             >  SRR4302543.4543383/1‑94 (MQ=60)

  ATCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCT                                                                                             <  SRR4302543.2666951/94‑1 (MQ=60)

  ATCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCT                                                                                             <  SRR4302543.5596838/94‑1 (MQ=60)

  ATCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCT                                                                                             >  SRR4302543.4680500/1‑94 (MQ=60)

    CGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAATTCTTCGGCTTTAATGCCCACCTTG                                                                                           <  SRR4302543.3537984/94‑1 (MQ=60)

    CGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTG                                                                                           >  SRR4302543.7888175/1‑94 (MQ=60)

    CGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTG                                                                                           >  SRR4302543.2617881/1‑94 (MQ=60)

     GCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGC                                                                                          <  SRR4302543.716730/94‑1 (MQ=60)

      CAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCG                                                                                         >  SRR4302543.7935501/1‑94 (MQ=60)

      CAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCG                                                                                         <  SRR4302543.1099169/94‑1 (MQ=60)

       AAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTCATGCCCACCTTGCGC                                                                                        >  SRR4302543.4136290/1‑94 (MQ=60)

       AAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGC                                                                                        >  SRR4302543.2412008/1‑94 (MQ=60)

       AAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGC                                                                                        >  SRR4302543.6999741/1‑94 (MQ=60)

       AAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGC                                                                                        >  SRR4302543.133056/1‑94 (MQ=60)

       AAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGC                                                                                        >  SRR4302543.4648554/1‑94 (MQ=60)

        AAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCT                                                                                       >  SRR4302543.4345842/1‑94 (MQ=60)

        AAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCT                                                                                       >  SRR4302543.4345841/1‑94 (MQ=60)

         AGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTC                                                                                      >  SRR4302543.3976334/1‑94 (MQ=60)

          GGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCT                                                                                     <  SRR4302543.1073321/94‑1 (MQ=60)

          GGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCT                                                                                     >  SRR4302543.7037166/1‑94 (MQ=60)

           GACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTT                                                                                    <  SRR4302543.4036943/94‑1 (MQ=60)

             CATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTC                                                                                  <  SRR4302543.7035571/94‑1 (MQ=60)

              ATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCA                                                                                 <  SRR4302543.986214/94‑1 (MQ=60)

              ATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCA                                                                                 >  SRR4302543.2170539/1‑94 (MQ=60)

              ATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCA                                                                                 >  SRR4302543.775491/1‑94 (MQ=60)

                CCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAAC                                                                               <  SRR4302543.2031100/94‑1 (MQ=60)

                CCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAAC                                                                               <  SRR4302543.3343732/94‑1 (MQ=60)

                CCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAAC                                                                               <  SRR4302543.2134181/94‑1 (MQ=60)

                CCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAAC                                                                               <  SRR4302543.2250864/94‑1 (MQ=60)

                 CCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACT                                                                              <  SRR4302543.3560754/94‑1 (MQ=60)

                 CCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACT                                                                              <  SRR4302543.5319988/94‑1 (MQ=60)

                 CCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACT                                                                              <  SRR4302543.1682248/94‑1 (MQ=60)

                    GCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCGCCTTGCGCTCTTTCAACTGCC                                                                           <  SRR4302543.5099823/94‑1 (MQ=60)

                     CAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCC                                                                          >  SRR4302543.4697/1‑94 (MQ=60)

                     CAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCC                                                                          <  SRR4302543.6535995/94‑1 (MQ=60)

                     CAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCC                                                                          >  SRR4302543.6689233/1‑94 (MQ=60)

                     CAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCC                                                                          >  SRR4302543.3780074/1‑94 (MQ=60)

                      AGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCG                                                                         >  SRR4302543.2066134/1‑94 (MQ=60)

                      AGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCG                                                                         >  SRR4302543.3556256/1‑94 (MQ=60)

                      AGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCG                                                                         >  SRR4302543.7182623/1‑94 (MQ=60)

                      AGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCG                                                                         <  SRR4302543.264859/94‑1 (MQ=60)

                      AGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCG                                                                         >  SRR4302543.4285902/1‑94 (MQ=60)

                       GAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGG                                                                        >  SRR4302543.3005338/1‑94 (MQ=60)

                       GAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCGTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGG                                                                        >  SRR4302543.1626893/1‑94 (MQ=60)

                         GAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCG                                                                      <  SRR4302543.6966686/94‑1 (MQ=60)

                         GAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCG                                                                      >  SRR4302543.1749386/1‑94 (MQ=60)

                           AAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCG                                                                    >  SRR4302543.6554692/1‑94 (MQ=60)

                           AAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCG                                                                    >  SRR4302543.980109/1‑94 (MQ=60)

                            AATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGA                                                                   >  SRR4302543.7008518/1‑94 (MQ=60)

                             ATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAG                                                                  >  SRR4302543.1181977/1‑94 (MQ=60)

                             ATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAG                                                                  <  SRR4302543.7845594/94‑1 (MQ=60)

                             ATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAG                                                                  >  SRR4302543.4839220/1‑94 (MQ=60)

                              TGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGT                                                                 >  SRR4302543.4289517/1‑94 (MQ=60)

                              TGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGT                                                                 <  SRR4302543.3500886/94‑1 (MQ=60)

                               GCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTT                                                                <  SRR4302543.7223811/94‑1 (MQ=60)

                               GCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTT                                                                <  SRR4302543.3940251/94‑1 (MQ=60)

                                 CGCACATCACCGCCAGCCCCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTAC                                                              <  SRR4302543.1602862/94‑1 (MQ=60)

                                 CGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTAC                                                              <  SRR4302543.5308341/94‑1 (MQ=60)

                                 CGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTAC                                                              >  SRR4302543.6422610/1‑94 (MQ=60)

                                   CACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAA                                                            >  SRR4302543.2539708/1‑94 (MQ=60)

                                    ACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAAT                                                           <  SRR4302543.5041482/94‑1 (MQ=60)

                                    ACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAAT                                                           >  SRR4302543.7468916/1‑94 (MQ=60)

                                    ACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAAT                                                           >  SRR4302543.6058732/1‑94 (MQ=60)

                                    ACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAAT                                                           <  SRR4302543.939808/94‑1 (MQ=60)

                                    ACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCATGCGCTCTTTCAACTGCCCGGCGCGAGTTACAAT                                                           >  SRR4302543.5069496/1‑94 (MQ=60)

                                     CATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATC                                                          >  SRR4302543.5389338/1‑94 (MQ=60)

                                     CATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTATTTCAACTGCCCGGCGCGAGTTACAATC                                                          >  SRR4302543.4837579/1‑94 (MQ=60)

                                      ATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCC                                                         >  SRR4302543.672591/1‑94 (MQ=60)

                                      ATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCC                                                         >  SRR4302543.2380814/1‑94 (MQ=60)

                                       TCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCC                                                        <  SRR4302543.5477192/94‑1 (MQ=60)

                                          CCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTAC                                                     <  SRR4302543.4324825/94‑1 (MQ=60)

                                          CCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTAC                                                     <  SRR4302543.1321446/94‑1 (MQ=60)

                                          CCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTAC                                                     <  SRR4302543.287037/94‑1 (MQ=60)

                                          CCGCCAGCACCAGCCCGTTTGTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGGGACAAACCCTAC                                                     >  SRR4302543.7095063/1‑94 (MQ=60)

                                           CGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACG                                                    <  SRR4302543.2709231/94‑1 (MQ=60)

                                           CGCCAACACCAGCCCTTTTTTCAGATTGACCTCTTCGGCTTTAATGCCCCCCTTGCGCTCTTTCAACTTCCCGGCGCGAGTTACAATCCCTACG                                                    <  SRR4302543.1818037/94‑1 (MQ=60)

                                            GCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGC                                                   <  SRR4302543.4143964/94‑1 (MQ=60)

                                            GCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGC                                                   <  SRR4302543.5470373/94‑1 (MQ=60)

                                            GCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGC                                                   >  SRR4302543.2680291/1‑94 (MQ=60)

                                            GCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGC                                                   >  SRR4302543.3729461/1‑94 (MQ=60)

                                             CCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCC                                                  <  SRR4302543.5114152/94‑1 (MQ=60)

                                              CAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCA                                                 >  SRR4302543.3592951/1‑94 (MQ=60)

                                                GCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGGTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAAT                                               <  SRR4302543.1114928/94‑1 (MQ=60)

                                                GCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCACT                                               >  SRR4302543.7607244/1‑94 (MQ=60)

                                                GCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAAT                                               <  SRR4302543.4859854/94‑1 (MQ=60)

                                                GCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAAT                                               <  SRR4302543.1112469/94‑1 (MQ=60)

                                                 CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATC                                              >  SRR4302543.4535385/1‑94 (MQ=60)

                                                 CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATC                                              >  SRR4302543.4535384/1‑94 (MQ=60)

                                                  ACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCA                                             >  SRR4302543.5159325/1‑94 (MQ=60)

                                                  ACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCA                                             <  SRR4302543.2011966/94‑1 (MQ=60)

                                                  ACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAAATGCCCGGCGCGAGTTACAATCCCTACGGCAATCA                                             >  SRR4302543.261809/1‑94 (MQ=60)

                                                   CCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAG                                            >  SRR4302543.6849954/1‑94 (MQ=60)

                                                   CCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAG                                            >  SRR4302543.7779957/1‑94 (MQ=60)

                                                   CCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTCTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAG                                            <  SRR4302543.278069/94‑1 (MQ=60)

                                                    CAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGC                                           >  SRR4302543.1493704/1‑94 (MQ=60)

                                                    CAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGC                                           <  SRR4302543.4829315/94‑1 (MQ=60)

                                                     AGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCG                                          <  SRR4302543.529389/94‑1 (MQ=60)

                                                     AGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCG                                          >  SRR4302543.2387797/1‑94 (MQ=60)

                                                      GCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGC                                         >  SRR4302543.3575525/1‑94 (MQ=60)

                                                       CCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCC                                        >  SRR4302543.3660217/1‑94 (MQ=60)

                                                       CCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCC                                        >  SRR4302543.1225632/1‑94 (MQ=60)

                                                        CCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCA                                       <  SRR4302543.1102815/94‑1 (MQ=60)

                                                        CCTTTTTTCAAATTGATCTCTTCGGCTTTAATCCCCCCCGTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCA                                       <  SRR4302543.1102814/94‑1 (MQ=60)

                                                         CTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCAC                                      >  SRR4302543.7432669/1‑94 (MQ=60)

                                                         CTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCAC                                      >  SRR4302543.4390253/1‑94 (MQ=60)

                                                         CTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCAC                                      <  SRR4302543.663357/94‑1 (MQ=60)

                                                         CTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCAC                                      >  SRR4302543.1106387/1‑94 (MQ=60)

                                                         CTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCAC                                      >  SRR4302543.6552899/1‑94 (MQ=60)

                                                         CTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGCTACAATCCCTACGCCAATCAGCGCCAC                                      >  SRR4302543.849270/1‑94 (MQ=60)

                                                           TTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCA                                    >  SRR4302543.6846597/1‑94 (MQ=60)

                                                           TTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCA                                    >  SRR4302543.6846596/1‑94 (MQ=60)

                                                           TTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCA                                    >  SRR4302543.3827019/1‑94 (MQ=60)

                                                           TTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCA                                    <  SRR4302543.3647456/94‑1 (MQ=60)

                                                            TTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAG                                   <  SRR4302543.1394887/94‑1 (MQ=60)

                                                              TTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAA                                 <  SRR4302543.5881043/94‑1 (MQ=60)

                                                               TCAGATTGACCTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAAC                                <  SRR4302543.6982060/94‑1 (MQ=60)

                                                               TCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAAC                                <  SRR4302543.758241/94‑1 (MQ=60)

                                                               TCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAAC                                <  SRR4302543.81711/94‑1 (MQ=60)

                                                               TCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAAC                                <  SRR4302543.59009/94‑1 (MQ=60)

                                                               TCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAAC                                <  SRR4302543.3440080/94‑1 (MQ=60)

                                                                CAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACG                               <  SRR4302543.4454891/94‑1 (MQ=60)

                                                                CAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACG                               >  SRR4302543.7397272/1‑94 (MQ=60)

                                                                 AGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGC                              >  SRR4302543.6565586/1‑94 (MQ=60)

                                                                  GATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCC                             <  SRR4302543.1792261/94‑1 (MQ=60)

                                                                   ATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCG                            >  SRR4302543.1090530/1‑94 (MQ=60)

                                                                   ATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCG                            >  SRR4302543.1126240/1‑94 (MQ=60)

                                                                   ATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCG                            >  SRR4302543.6872214/1‑94 (MQ=60)

                                                                   ATGGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCG                            <  SRR4302543.628560/94‑1 (MQ=60)

                                                                     TGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAG                          >  SRR4302543.4956283/1‑94 (MQ=60)

                                                                     TGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAG                          >  SRR4302543.2052899/1‑94 (MQ=60)

                                                                     TGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAG                          >  SRR4302543.7361486/1‑94 (MQ=60)

                                                                     TGAACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAG                          <  SRR4302543.6213031/94‑1 (MQ=60)

                                                                       AACTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCACCGCCACCAGAACGCCGAGCA                        >  SRR4302543.1791174/1‑94 (MQ=60)

                                                                         CTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC                      >  SRR4302543.4190601/1‑94 (MQ=60)

                                                                         CTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC                      <  SRR4302543.7349933/94‑1 (MQ=60)

                                                                         CTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC                      <  SRR4302543.7349934/94‑1 (MQ=60)

                                                                         CTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC                      <  SRR4302543.6549241/94‑1 (MQ=60)

                                                                         CTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC                      >  SRR4302543.2633494/1‑94 (MQ=60)

                                                                         CTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC                      <  SRR4302543.6062282/94‑1 (MQ=60)

                                                                         CTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC                      >  SRR4302543.2687646/1‑94 (MQ=60)

                                                                         CTCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC                      <  SRR4302543.3170026/94‑1 (MQ=60)

                                                                          TCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACG                     >  SRR4302543.3116795/1‑94 (MQ=60)

                                                                          TCTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACG                     >  SRR4302543.4111512/1‑94 (MQ=60)

                                                                           CTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGT                    >  SRR4302543.888098/1‑94 (MQ=60)

                                                                           CTTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGT                    >  SRR4302543.708254/1‑94 (MQ=60)

                                                                            TTCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTGCAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTC                   >  SRR4302543.560547/1‑94 (MQ=60)

                                                                             TCGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCA                  >  SRR4302543.543879/1‑94 (MQ=60)

                                                                              CGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCAT                 >  SRR4302543.6666648/1‑94 (MQ=60)

                                                                              CGGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCAT                 <  SRR4302543.410375/94‑1 (MQ=60)

                                                                               GGCTTTAATGCCCCCCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATG                <  SRR4302543.2368077/94‑1 (MQ=60)

                                                                               GGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATG                >  SRR4302543.1349838/1‑94 (MQ=60)

                                                                               GGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATG                >  SRR4302543.4087045/1‑94 (MQ=60)

                                                                               GGCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATG                >  SRR4302543.5352151/1‑94 (MQ=60)

                                                                                GCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGC               <  SRR4302543.2381537/94‑1 (MQ=60)

                                                                                GCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGC               >  SRR4302543.520220/1‑94 (MQ=60)

                                                                                GCTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGC               <  SRR4302543.7244583/94‑1 (MQ=60)

                                                                                 CTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCG              >  SRR4302543.2397886/1‑94 (MQ=60)

                                                                                 CTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCG              >  SRR4302543.1973500/1‑94 (MQ=60)

                                                                                 CTTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCG              <  SRR4302543.6432814/94‑1 (MQ=60)

                                                                                  TTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGT             >  SRR4302543.4622989/1‑94 (MQ=60)

                                                                                  TTTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGT             >  SRR4302543.5914995/1‑94 (MQ=60)

                                                                                   TTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTC            >  SRR4302543.2935713/1‑94 (MQ=60)

                                                                                   TTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTC            <  SRR4302543.3008893/94‑1 (MQ=60)

                                                                                   TTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTC            >  SRR4302543.3634921/1‑94 (MQ=60)

                                                                                   TTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTC            >  SRR4302543.3798929/1‑94 (MQ=60)

                                                                                   TTAATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTC            <  SRR4302543.2339349/94‑1 (MQ=60)

                                                                                     AATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCG          <  SRR4302543.1551531/94‑1 (MQ=60)

                                                                                      ATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGC         >  SRR4302543.3814574/1‑94 (MQ=60)

                                                                                      ATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGC         >  SRR4302543.3293976/1‑94 (MQ=60)

                                                                                      ATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGC         >  SRR4302543.7319275/1‑94 (MQ=60)

                                                                                      ATGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGC         >  SRR4302543.363617/1‑94 (MQ=60)

                                                                                       TGCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCC        >  SRR4302543.2575604/1‑94 (MQ=60)

                                                                                        GCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCT       >  SRR4302543.2210695/1‑94 (MQ=60)

                                                                                        GCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCT       >  SRR4302543.7950728/1‑94 (MQ=60)

                                                                                        GCCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCT       >  SRR4302543.7433878/1‑94 (MQ=60)

                                                                                         CCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTT      <  SRR4302543.7802817/94‑1 (MQ=60)

                                                                                         CCCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTT      <  SRR4302543.5107840/94‑1 (MQ=60)

                                                                                         CCCACCTTGCGCTCTTTCAACTGCCCGCCGCTAGGTACAAGCCCTACGCCAATCAGCGCCACCAGAACGCCGATCAACGTCATGCGTCCGCCTT      <  SRR4302543.7967399/94‑1 (MQ=60)

                                                                                          CCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTC     >  SRR4302543.3649157/1‑94 (MQ=60)

                                                                                          CCACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTC     >  SRR4302543.2363326/1‑94 (MQ=60)

                                                                                           CACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTCG    >  SRR4302543.7605669/1‑94 (MQ=60)

                                                                                           CACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTCG    >  SRR4302543.2731391/1‑94 (MQ=60)

                                                                                           CACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTCG    <  SRR4302543.3687296/94‑1 (MQ=60)

                                                                                           CACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTCG    <  SRR4302543.1713300/94‑1 (MQ=60)

                                                                                           CACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTCG    <  SRR4302543.7967809/94‑1 (MQ=60)

                                                                                           CACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTCG    >  SRR4302543.1393325/1‑94 (MQ=60)

                                                                                           CACCTTGCGCTCGTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTCG    >  SRR4302543.7859267/1‑94 (MQ=60)

                                                                                            ACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTCGG   >  SRR4302543.2465596/1‑94 (MQ=60)

                                                                                            ACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTCGG   >  SRR4302543.294639/1‑94 (MQ=60)

                                                                                            ACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTCGG   <  SRR4302543.5157936/94‑1 (MQ=60)

                                                                                            ACCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTCGG   <  SRR4302543.3618688/94‑1 (MQ=60)

                                                                                            ACCTTGCGCTCTTTCAACTGCCAGGCGCGAATTACAATCCCCACGCCCATACGCGCCACCAGAACGCCGAGCACCGTCATGCGTCCGCCTTCCG   >  SRR4302543.294638/1‑94 (MQ=60)

                                                                                             CCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGACTTCGGT  >  SRR4302543.4013136/1‑94 (MQ=60)

TCATCGCAAAGGACATCCCGGCAGAGAAAATGCCGCACATCACCGCCAGCACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAACGTCATGCGTCCGCCTTCGGT  >  NC_000913/4097530‑4097716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`