Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,108,133 A→G G208G (GGA→GGG)  cdh → CDP‑diacylglycerol phosphotidylhydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,108,1330AG99.7% 1051.8 / NA 336G208G (GGA→GGG) cdhCDP‑diacylglycerol phosphotidylhydrolase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (128/207);  minor base T (0/1);  total (128/208)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 350 total aligned reads displayed.

GGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGACGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTC  >  NC_000913/4108043‑4108222
                                                                                          |                                                                                         
ggCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCg                                                                                         >  2:5568177/1‑93 (MQ=255)
 gcgcGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGgcgc                                                                                        <  2:119118/93‑1 (MQ=255)
 gcgcGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGgcgc                                                                                        <  1:6741483/93‑1 (MQ=255)
    cgTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTAc                                                                                     >  2:441828/1‑93 (MQ=255)
    cgTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTAc                                                                                     <  1:3846243/93‑1 (MQ=255)
     gTCGGGTATCGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACg                                                                                    <  2:6188941/93‑1 (MQ=255)
     gTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACg                                                                                    >  1:6177783/1‑93 (MQ=255)
     gTCGGGTAACGGAAAGCGAACTGGTACAACGCAGACCATTTCTGATGCTAGCAGAAGAAGTACCTAAGGCGAGGGAACATATGGGGCGCTACg                                                                                    >  1:2811430/1‑93 (MQ=255)
      tCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACgg                                                                                   >  2:2161339/1‑93 (MQ=255)
        gggTAACGGAAAGCGAACTGGTACAACGCAGCCGATTTATGATGCTGGCAGAAGAAGTGCCTGAGGCGCGGGAACATATGGGGCGCTACGGGc                                                                                 <  1:6337718/93‑1 (MQ=255)
        gggTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGc                                                                                 <  2:1625933/93‑1 (MQ=255)
        gggTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGc                                                                                 <  1:3652425/93‑1 (MQ=255)
        gggTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGACGCGCGGGAACATATGGGGCGCTACGGGc                                                                                 >  1:7808128/1‑93 (MQ=255)
         ggTAGCGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCt                                                                                <  2:3134005/93‑1 (MQ=255)
         ggTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCt                                                                                >  2:7071118/1‑93 (MQ=255)
          gTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTg                                                                               >  2:1594645/1‑93 (MQ=255)
           tAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTgg                                                                              >  1:2898335/1‑93 (MQ=255)
           tAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTgg                                                                              >  2:752526/1‑93 (MQ=255)
           gaaCGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTgg                                                                              <  1:1032382/92‑1 (MQ=255)
              cGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGa                                                                           <  2:4632521/93‑1 (MQ=255)
               ggAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGAt                                                                          <  2:4035927/93‑1 (MQ=255)
               ggAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGAt                                                                          <  2:3423693/93‑1 (MQ=255)
               ggAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGAt                                                                          >  2:4994073/1‑93 (MQ=255)
               ggAAAGCGAACGGGTACAACGCAGCCCAGTTATGATGGTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGAt                                                                          <  2:6147463/93‑1 (MQ=255)
                gAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATg                                                                         >  2:7222525/1‑93 (MQ=255)
                gAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATg                                                                         <  1:7138930/93‑1 (MQ=255)
                 aaaGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATgg                                                                        <  1:5221192/93‑1 (MQ=255)
                   aGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTa                                                                      <  2:596397/93‑1 (MQ=255)
                    gCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTAc                                                                     <  2:572855/93‑1 (MQ=255)
                    gCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTAc                                                                     <  1:4846614/93‑1 (MQ=255)
                      gAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACgg                                                                   <  2:4327906/93‑1 (MQ=255)
                      gAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACgg                                                                   >  2:7675108/1‑93 (MQ=255)
                        aCTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCa                                                                 <  1:7284954/93‑1 (MQ=255)
                          tGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGTCGCTACGGGCTGGTGATGGTACGGCaga                                                               >  1:319074/1‑93 (MQ=255)
                           ggTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGTTACGGGCTGGCGATGGTACGGCagag                                                              <  1:3966139/93‑1 (MQ=255)
                           ggTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCagag                                                              <  2:5868330/93‑1 (MQ=255)
                            gTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGt                                                             <  1:5706287/93‑1 (MQ=255)
                              aCAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGa                                                           <  1:5150892/93‑1 (MQ=255)
                              aCAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGGACGGCAGAGTGa                                                           >  2:544841/1‑93 (MQ=255)
                               cAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGAt                                                          <  2:2291188/93‑1 (MQ=255)
                               cAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGAt                                                          >  1:5459025/1‑93 (MQ=255)
                                   gCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACt                                                      >  1:6854364/1‑93 (MQ=255)
                                   gCAGCCAATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACt                                                      >  2:7786836/1‑93 (MQ=255)
                                    cAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTc                                                     <  1:5080794/93‑1 (MQ=255)
                                      gCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCAt                                                   <  2:1935965/93‑1 (MQ=255)
                                      gCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCAt                                                   <  1:2538066/93‑1 (MQ=255)
                                        ccATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCAttt                                                 >  1:6410986/1‑93 (MQ=255)
                                         cATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTg                                                <  1:654833/93‑1 (MQ=255)
                                           tttATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTa                                              >  2:2947516/1‑93 (MQ=255)
                                           tttATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTa                                              >  1:4172164/1‑93 (MQ=255)
                                           tttATGATCCTGCAAGAAGAAGTGCCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTa                                              <  2:7633669/93‑1 (MQ=255)
                                            ttATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTAt                                             <  1:5948692/93‑1 (MQ=255)
                                             tATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTAtt                                            <  2:2392441/93‑1 (MQ=255)
                                               tgatgCTGGCAGAAGAAGTACCTGAGGCGCGGGAGCATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGc                                          >  1:6934753/1‑93 (MQ=255)
                                               tgatgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGc                                          <  1:2028159/93‑1 (MQ=255)
                                               tgatgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGc                                          >  2:3680994/1‑93 (MQ=255)
                                               tgatgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGc                                          <  1:7562773/93‑1 (MQ=255)
                                                  tgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTgg                                       >  2:3812347/1‑93 (MQ=255)
                                                     tGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGa                                    <  2:7272697/93‑1 (MQ=255)
                                                          gaagaaGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACaa                               <  1:6299344/93‑1 (MQ=255)
                                                          gaagaaGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACaa                               >  1:4954116/1‑93 (MQ=255)
                                                          gaagaaGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACaa                               >  1:1499809/1‑93 (MQ=255)
                                                           aagaagTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAAc                              >  2:2843222/1‑93 (MQ=255)
                                                           aagaagTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAAc                              >  1:7066150/1‑93 (MQ=255)
                                                           aagaagTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAAc                              <  2:6420741/93‑1 (MQ=255)
                                                            agaagTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACg                             >  2:7896356/1‑93 (MQ=255)
                                                             gaagTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGa                            <  1:3280287/93‑1 (MQ=255)
                                                               agTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGaaa                          <  1:7426162/93‑1 (MQ=255)
                                                               agTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGaaa                          <  2:4590503/93‑1 (MQ=255)
                                                                gTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAAt                         <  2:5616659/93‑1 (MQ=255)
                                                                  aCCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCt                       >  2:2481371/1‑93 (MQ=255)
                                                                   ccTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTa                      <  2:1076939/93‑1 (MQ=255)
                                                                   ccTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTa                      >  2:3611479/1‑93 (MQ=255)
                                                                   ccTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTa                      <  1:1906683/93‑1 (MQ=255)
                                                                   ccTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTa                      <  1:343240/93‑1 (MQ=255)
                                                                    cTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAc                     <  1:1348384/93‑1 (MQ=255)
                                                                     tGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCTACACAACGAAATCTACt                    <  1:1794542/93‑1 (MQ=255)
                                                                     tGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACt                    >  1:1391668/1‑93 (MQ=255)
                                                                     tGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACt                    >  1:1744436/1‑93 (MQ=255)
                                                                     tGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACt                    <  2:7138254/93‑1 (MQ=255)
                                                                     tGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACt                    <  2:7322497/93‑1 (MQ=255)
                                                                     tGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGCATTGCTCGTGACACAACGAAATCTACt                    >  2:7195751/1‑93 (MQ=255)
                                                                       aGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGa                  <  1:4483056/93‑1 (MQ=255)
                                                                       aGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGa                  <  1:2701070/93‑1 (MQ=255)
                                                                        ggCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGGCACAACGAAATCTACTGAc                 <  1:1283484/93‑1 (MQ=255)
                                                                        ggCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGAc                 <  2:1357060/93‑1 (MQ=255)
                                                                            cgGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCtt             <  2:7582416/93‑1 (MQ=255)
                                                                             gggAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTa            <  2:3371110/93‑1 (MQ=255)
                                                                              ggAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTaa           <  1:400014/93‑1 (MQ=255)
                                                                               gAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAAc          >  1:2336032/1‑93 (MQ=255)
                                                                                aaCATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAAcc         <  1:2425439/93‑1 (MQ=255)
                                                                                 aCATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCg        <  2:516369/93‑1 (MQ=255)
                                                                                 aCATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCg        >  1:7693796/1‑93 (MQ=255)
                                                                                  cATATGGGGCGCTCCGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTTTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGt       <  2:6736790/93‑1 (MQ=255)
                                                                                  cATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGt       <  1:4661801/93‑1 (MQ=255)
                                                                                  aatatGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGt       <  1:1584924/92‑1 (MQ=255)
                                                                                    tatGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGc     <  1:3859106/93‑1 (MQ=255)
                                                                                    tatGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGc     <  1:2219795/93‑1 (MQ=255)
                                                                                       ggggCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTc  <  2:1838530/93‑1 (MQ=255)
                                                                                       ggggCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTc  >  1:3081387/1‑93 (MQ=255)
                                                                                          |                                                                                         
GGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGACGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTC  >  NC_000913/4108043‑4108222

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCTGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGACGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCC  >  NC_000913/4108040‑4108226
                                                                                             |                                                                                             
CCTGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGG                                                                                               <  SRR4302543.3250893/94‑1 (MQ=60)
CCTGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGG                                                                                               >  SRR4302543.1369202/1‑94 (MQ=60)
CCTGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGG                                                                                               <  SRR4302543.4331982/94‑1 (MQ=60)
 CTGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGC                                                                                              <  SRR4302543.5601868/94‑1 (MQ=60)
  TGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCG                                                                                             >  SRR4302543.4994619/1‑94 (MQ=60)
  TGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCG                                                                                             <  SRR4302543.3106339/94‑1 (MQ=60)
   GGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGC                                                                                            <  SRR4302543.5852635/94‑1 (MQ=60)
    GCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCT                                                                                           <  SRR4302543.3418613/94‑1 (MQ=60)
    GCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCT                                                                                           <  SRR4302543.6805148/94‑1 (MQ=60)
      GCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTAC                                                                                         <  SRR4302543.1800442/94‑1 (MQ=60)
      GCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTAC                                                                                         <  SRR4302543.1302872/94‑1 (MQ=60)
      GCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTAC                                                                                         >  SRR4302543.4921350/1‑94 (MQ=60)
       CGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACG                                                                                        >  SRR4302543.6236189/1‑94 (MQ=60)
       CGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACG                                                                                        <  SRR4302543.3880215/94‑1 (MQ=60)
       CGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACG                                                                                        <  SRR4302543.2977072/94‑1 (MQ=60)
       CGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACG                                                                                        <  SRR4302543.7874045/94‑1 (MQ=60)
       CGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGACCATTTCTGATGCTAGCAGAAGAAGTACCTAAGGCGAGGGAACATATGGGGCGCTACG                                                                                        >  SRR4302543.2837170/1‑94 (MQ=60)
         TCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGG                                                                                      <  SRR4302543.4646017/94‑1 (MQ=60)
         TCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGG                                                                                      >  SRR4302543.237925/1‑94 (MQ=60)
          CGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGC                                                                                     >  SRR4302543.4134947/1‑94 (MQ=60)
          CGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGC                                                                                     <  SRR4302543.4065735/94‑1 (MQ=60)
          CGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGACGCGCGGGAACATATGGGGCGCTACGGGC                                                                                     >  SRR4302543.7881725/1‑94 (MQ=60)
           GGGTAACGGAAAGCGAACTGGTACAACGCAGCCGATTTATGATGCTGGCAGAAGAAGTGCCTGAGGCGCGGGAACATATGGGGCGCTACGGGCT                                                                                    <  SRR4302543.6397315/94‑1 (MQ=60)
           GGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCT                                                                                    <  SRR4302543.2335777/94‑1 (MQ=60)
           GGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCT                                                                                    <  SRR4302543.3684511/94‑1 (MQ=60)
            GGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTG                                                                                   <  SRR4302543.178939/94‑1 (MQ=60)
            GGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTG                                                                                   <  SRR4302543.4894849/94‑1 (MQ=60)
            GGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTG                                                                                   >  SRR4302543.5360371/1‑94 (MQ=60)
             GTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGG                                                                                  >  SRR4302543.2924687/1‑94 (MQ=60)
              TAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGC                                                                                 >  SRR4302543.3263730/1‑94 (MQ=60)
              TAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGC                                                                                 >  SRR4302543.4271165/1‑94 (MQ=60)
              TAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGC                                                                                 <  SRR4302543.438305/94‑1 (MQ=60)
              GAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGC                                                                                 <  SRR4302543.1041548/94‑1 (MQ=60)
               AACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCG                                                                                >  SRR4302543.2873605/1‑94 (MQ=60)
               AACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCG                                                                                <  SRR4302543.4003243/94‑1 (MQ=60)
               AACGGAAAGCGAACTGGGACAACGCAGCGCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCG                                                                                <  SRR4302543.4003244/94‑1 (MQ=60)
                ACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGAGCTGGCGA                                                                               >  SRR4302543.5162232/1‑94 (MQ=60)
                 CGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGAT                                                                              >  SRR4302543.2437812/1‑94 (MQ=60)
                  GGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAGCATATGGGGCGCTACGGGCTGGCGATG                                                                             >  SRR4302543.1571990/1‑94 (MQ=60)
                   GAAAGCGAGCTGGTACAAGCCAGCCGAGATATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGG                                                                            <  SRR4302543.6373051/94‑1 (MQ=60)
                   GAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGG                                                                            <  SRR4302543.7208297/94‑1 (MQ=60)
                   GAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGG                                                                            <  SRR4302543.6373050/94‑1 (MQ=60)
                   GAAAGCAAACTGGTACAACGCAGCCCATTTATGATGCTGGAAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGG                                                                            <  SRR4302543.7072889/94‑1 (MQ=60)
                    AAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGT                                                                           <  SRR4302543.5268215/94‑1 (MQ=60)
                     AAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTA                                                                          <  SRR4302543.2477115/94‑1 (MQ=60)
                      AGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTAC                                                                         <  SRR4302543.3806139/94‑1 (MQ=60)
                      AGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTAC                                                                         <  SRR4302543.76746/94‑1 (MQ=60)
                       GCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACG                                                                        <  SRR4302543.4890810/94‑1 (MQ=60)
                       GCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACG                                                                        <  SRR4302543.4052701/94‑1 (MQ=60)
                       GCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACG                                                                        <  SRR4302543.133332/94‑1 (MQ=60)
                       GCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGGACG                                                                        >  SRR4302543.7079051/1‑94 (MQ=60)
                        CGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGG                                                                       >  SRR4302543.314028/1‑94 (MQ=60)
                         GAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGC                                                                      >  SRR4302543.3896378/1‑94 (MQ=60)
                         GAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGC                                                                      >  SRR4302543.7759398/1‑94 (MQ=60)
                           ACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAG                                                                    <  SRR4302543.7355294/94‑1 (MQ=60)
                            CTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGTCGCTACGGGCTGGTGATGGTACGGCAGA                                                                   >  SRR4302543.321961/1‑94 (MQ=60)
                            CTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGG                                                                   >  SRR4302543.671117/1‑94 (MQ=60)
                            CTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGA                                                                   >  SRR4302543.321960/1‑94 (MQ=60)
                            CTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGA                                                                   >  SRR4302543.7269714/1‑94 (MQ=60)
                            CTGGTACAACGCACCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGA                                                                   <  SRR4302543.2884218/94‑1 (MQ=60)
                             TGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAG                                                                  >  SRR4302543.3412813/1‑94 (MQ=60)
                              GGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGTTACGGGCTGGCGATGGTACGGCAGAGT                                                                 <  SRR4302543.4001275/94‑1 (MQ=60)
                               GTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTG                                                                <  SRR4302543.1988638/94‑1 (MQ=60)
                               GTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTG                                                                <  SRR4302543.5186162/94‑1 (MQ=60)
                               GTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTG                                                                <  SRR4302543.5758332/94‑1 (MQ=60)
                               GTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTG                                                                <  SRR4302543.6400789/94‑1 (MQ=60)
                                 ACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGAT                                                              <  SRR4302543.5197448/94‑1 (MQ=60)
                                 ACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGAT                                                              >  SRR4302543.5508506/1‑94 (MQ=60)
                                    ACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAAC                                                           <  SRR4302543.784941/94‑1 (MQ=60)
                                     CGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACT                                                          >  SRR4302543.6919002/1‑94 (MQ=60)
                                      GCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGGGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGGGATAACTC                                                         >  SRR4302543.132319/1‑94 (MQ=60)
                                      GCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTC                                                         >  SRR4302543.7922669/1‑94 (MQ=60)
                                       CAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCA                                                        <  SRR4302543.5806753/94‑1 (MQ=60)
                                       CAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCA                                                        <  SRR4302543.5126873/94‑1 (MQ=60)
                                        AGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCAT                                                       <  SRR4302543.2759027/94‑1 (MQ=60)
                                         GCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCaaatctgcaactccggctcaggcacag                                                      >  SRR4302543.7853051/1‑67 (MQ=60)
                                         GCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATT                                                      <  SRR4302543.2561193/94‑1 (MQ=60)
                                          CCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTT                                                     <  SRR4302543.3778129/94‑1 (MQ=60)
                                          CCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTT                                                     >  SRR4302543.6471359/1‑94 (MQ=60)
                                          CCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTT                                                     >  SRR4302543.6494249/1‑94 (MQ=60)
                                           CCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTG                                                    >  SRR4302543.3933612/1‑94 (MQ=60)
                                           CCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTG                                                    <  SRR4302543.5117044/94‑1 (MQ=60)
                                           CCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTG                                                    <  SRR4302543.1912435/94‑1 (MQ=60)
                                            CATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGT                                                   >  SRR4302543.5165538/1‑94 (MQ=60)
                                            CATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGT                                                   >  SRR4302543.2463886/1‑94 (MQ=60)
                                            CATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGT                                                   <  SRR4302543.4840405/94‑1 (MQ=60)
                                            CATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGT                                                   <  SRR4302543.660829/94‑1 (MQ=60)
                                             ATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTAggggagggtggtgactcgtttggt                                                  >  SRR4302543.3880235/1‑70 (MQ=60)
                                             ATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTA                                                  >  SRR4302543.3880234/1‑94 (MQ=60)
                                             ATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTA                                                  >  SRR4302543.1445562/1‑94 (MQ=60)
                                             ATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTA                                                  >  SRR4302543.4209945/1‑94 (MQ=60)
                                             ATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTA                                                  <  SRR4302543.5351843/94‑1 (MQ=60)
                                             ATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTA                                                  >  SRR4302543.7195818/1‑94 (MQ=60)
                                               TTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATT                                                <  SRR4302543.6003132/94‑1 (MQ=60)
                                               TTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATT                                                >  SRR4302543.7478010/1‑94 (MQ=60)
                                               TTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATT                                                <  SRR4302543.4670485/94‑1 (MQ=60)
                                               TTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATT                                                <  SRR4302543.4670486/94‑1 (MQ=60)
                                                TATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTG                                               <  SRR4302543.2580993/94‑1 (MQ=60)
                                                 ATGATGCTGGCAGGCGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGGTAACTAATTTGTATTGT                                              >  SRR4302543.6999983/1‑94 (MQ=60)
                                                 ATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAGCATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGC                                              >  SRR4302543.6999985/1‑94 (MQ=60)
                                                 ATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGT                                              >  SRR4302543.1448821/1‑94 (MQ=60)
                                                 ATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGC                                              >  SRR4302543.2950580/1‑94 (MQ=60)
                                                 ATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGC                                              <  SRR4302543.1923156/94‑1 (MQ=60)
                                                  TGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCT                                             <  SRR4302543.7634755/94‑1 (MQ=60)
                                                  TGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCT                                             <  SRR4302543.5766391/94‑1 (MQ=60)
                                                  TGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCT                                             <  SRR4302543.2046388/94‑1 (MQ=60)
                                                   GATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTG                                            <  SRR4302543.3912730/94‑1 (MQ=60)
                                                    ATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGG                                           <  SRR4302543.751742/94‑1 (MQ=60)
                                                       CTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGA                                        <  SRR4302543.6925867/94‑1 (MQ=60)
                                                         GGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGACGCTACGGGCTGGCGAGGGTACTGAAGAATGGTAACTCATTTGTATTGCTGGCGACA                                      >  SRR4302543.7482360/1‑94 (MQ=60)
                                                          GCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACAC                                     <  SRR4302543.5753808/94‑1 (MQ=60)
                                                           GAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACA                                    <  SRR4302543.2569124/94‑1 (MQ=60)
                                                            AGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAA                                   >  SRR4302543.7456273/1‑94 (MQ=60)
                                                            AGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAA                                   >  SRR4302543.4999229/1‑94 (MQ=60)
                                                            AGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAA                                   >  SRR4302543.1513298/1‑94 (MQ=60)
                                                            AGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAA                                   >  SRR4302543.2620095/1‑94 (MQ=60)
                                                            AGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAA                                   >  SRR4302543.3171763/1‑94 (MQ=60)
                                                             GAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAAC                                  <  SRR4302543.1265614/94‑1 (MQ=60)
                                                             GAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAAC                                  <  SRR4302543.6358626/94‑1 (MQ=60)
                                                             GAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAAC                                  >  SRR4302543.7134757/1‑94 (MQ=60)
                                                              AAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACG                                 >  SRR4302543.182410/1‑94 (MQ=60)
                                                              AAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACG                                 <  SRR4302543.6009085/94‑1 (MQ=60)
                                                              AAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACG                                 <  SRR4302543.6009084/94‑1 (MQ=60)
                                                              AAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACG                                 >  SRR4302543.55196/1‑94 (MQ=60)
                                                                GAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAA                               <  SRR4302543.3309906/94‑1 (MQ=60)
                                                                GAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAA                               <  SRR4302543.7425345/94‑1 (MQ=60)
                                                                  AGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAAT                             <  SRR4302543.6248192/94‑1 (MQ=60)
                                                                  AGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAAT                             <  SRR4302543.7497374/94‑1 (MQ=60)
                                                                  AGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAAT                             <  SRR4302543.7497375/94‑1 (MQ=60)
                                                                   GTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATC                            <  SRR4302543.2286396/94‑1 (MQ=60)
                                                                    TACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCT                           <  SRR4302543.505694/94‑1 (MQ=60)
                                                                    TACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCT                           <  SRR4302543.2023697/94‑1 (MQ=60)
                                                                     ACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTA                          >  SRR4302543.5255540/1‑94 (MQ=60)
                                                                      CCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACACCGAAATCTAC                         >  SRR4302543.1648980/1‑94 (MQ=60)
                                                                      CCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAC                         <  SRR4302543.3316834/94‑1 (MQ=60)
                                                                      CCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAC                         <  SRR4302543.1923853/94‑1 (MQ=60)
                                                                      CCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAC                         <  SRR4302543.346407/94‑1 (MQ=60)
                                                                       CTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACT                        <  SRR4302543.105280/94‑1 (MQ=60)
                                                                       CTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACT                        >  SRR4302543.5276028/1‑94 (MQ=60)
                                                                       CTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACT                        >  SRR4302543.2818760/1‑94 (MQ=60)
                                                                       CTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACT                        >  SRR4302543.2380550/1‑94 (MQ=60)
                                                                       CTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACT                        >  SRR4302543.1760013/1‑94 (MQ=60)
                                                                       CTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACT                        >  SRR4302543.1404198/1‑94 (MQ=60)
                                                                       CTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACT                        >  SRR4302543.1404196/1‑94 (MQ=60)
                                                                       CTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACT                        <  SRR4302543.1360440/94‑1 (MQ=60)
                                                                       CTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACT                        <  SRR4302543.1360441/94‑1 (MQ=60)
                                                                        TGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCTACACAACGAAATCTACTG                       <  SRR4302543.1810601/94‑1 (MQ=60)
                                                                        TGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTG                       <  SRR4302543.1524356/94‑1 (MQ=60)
                                                                        CGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTG                       >  SRR4302543.1471154/1‑94 (MQ=60)
                                                                          AGGCGCGGGTACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTGCTGAC                     >  SRR4302543.3465560/1‑94 (MQ=60)
                                                                          AGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGAC                     <  SRR4302543.2725570/94‑1 (MQ=60)
                                                                          AGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGAC                     <  SRR4302543.4523772/94‑1 (MQ=60)
                                                                          AGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGAC                     <  SRR4302543.5226059/94‑1 (MQ=60)
                                                                          AGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGAC                     <  SRR4302543.2107657/94‑1 (MQ=60)
                                                                          AGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGAC                     <  SRR4302543.3612173/94‑1 (MQ=60)
                                                                          AGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTAAC                     >  SRR4302543.2162369/1‑94 (MQ=60)
                                                                           GGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGGCACAACGAAATCTACTGACG                    <  SRR4302543.1294927/94‑1 (MQ=60)
                                                                           GGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACG                    <  SRR4302543.6899027/94‑1 (MQ=60)
                                                                           GGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACG                    <  SRR4302543.2887686/94‑1 (MQ=60)
                                                                           GGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGAAG                    <  SRR4302543.6899028/94‑1 (MQ=60)
                                                                             CGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCT                  <  SRR4302543.3757949/94‑1 (MQ=60)
                                                                              GCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTT                 >  SRR4302543.6413993/1‑94 (MQ=60)
                                                                               CGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTA                <  SRR4302543.965895/94‑1 (MQ=60)
                                                                                GGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAA               >  SRR4302543.7692915/1‑94 (MQ=60)
                                                                                GGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAA               >  SRR4302543.6698875/1‑94 (MQ=60)
                                                                                 GGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAAC              >  SRR4302543.328302/1‑94 (MQ=60)
                                                                                 GGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAAC              <  SRR4302543.6947495/94‑1 (MQ=60)
                                                                                 GGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAAC              >  SRR4302543.2357228/1‑94 (MQ=60)
                                                                                 GGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAAC              <  SRR4302543.403707/94‑1 (MQ=60)
                                                                                  GAGCATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACC             <  SRR4302543.6338946/94‑1 (MQ=60)
                                                                                  GAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACC             <  SRR4302543.1635968/94‑1 (MQ=60)
                                                                                   AACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCG            >  SRR4302543.7766628/1‑94 (MQ=60)
                                                                                   AACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCG            <  SRR4302543.2447331/94‑1 (MQ=60)
                                                                                    ACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGT           <  SRR4302543.6403644/94‑1 (MQ=60)
                                                                                     CATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTG          <  SRR4302543.6307801/94‑1 (MQ=60)
                                                                                     CATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTG          <  SRR4302543.4704272/94‑1 (MQ=60)
                                                                                     CATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTG          >  SRR4302543.1626270/1‑94 (MQ=60)
                                                                                     CATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTG          <  SRR4302543.65634/94‑1 (MQ=60)
                                                                                     CATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTG          <  SRR4302543.7298963/94‑1 (MQ=60)
                                                                                     CATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTG          >  SRR4302543.6803804/1‑94 (MQ=60)
                                                                                     AATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTG          <  SRR4302543.1599072/94‑1 (MQ=60)
                                                                                      ATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGC         >  SRR4302543.204885/1‑94 (MQ=60)
                                                                                      ATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGC         <  SRR4302543.7137862/94‑1 (MQ=60)
                                                                                      ATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGC         <  SRR4302543.7137861/94‑1 (MQ=60)
                                                                                       TATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCT        <  SRR4302543.3893194/94‑1 (MQ=60)
                                                                                       TATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCT        <  SRR4302543.2239824/94‑1 (MQ=60)
                                                                                       TATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCT        <  SRR4302543.4735499/94‑1 (MQ=60)
                                                                                         TGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTC      >  SRR4302543.3109092/1‑94 (MQ=60)
                                                                                           GGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAG    <  SRR4302543.4713863/94‑1 (MQ=60)
                                                                                             GCGCTACGGGCTGGCGATGGTACGGCAGAGTGATACCTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCC  <  SRR4302543.6984755/94‑1 (MQ=60)
                                                                                             GCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCC  <  SRR4302543.7662382/94‑1 (MQ=60)
                                                                                             GCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCC  <  SRR4302543.4802927/94‑1 (MQ=60)
                                                                                             GCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCC  <  SRR4302543.4871050/94‑1 (MQ=60)
                                                                                             |                                                                                             
CCTGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGACGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCC  >  NC_000913/4108040‑4108226

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑