Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,175,949 +G intergenic (+82/‑76) nusG → / → rplK NusG/50S ribosomal subunit protein L11

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,175,9471.G98.7% 987.8 / 2.9 314intergenic (+80/‑78)nusG/rplKNusG/50S ribosomal subunit protein L11
Reads supporting (aligned to +/- strand):  ref base . (2/2);  new base G (164/146);  total (166/148)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 349 total aligned reads displayed.

TGAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA  >  NC_000913/4175855‑4176034
                                                                                             |                                                                                       
tGAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGAAATACAATTTCGCGCCTTTTGTTTTTAt                                                                                          <  1:981969/93‑1 (MQ=255)
 gAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑g                                                                                        >  2:269958/1‑93 (MQ=255)
  aaaaaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑gg                                                                                       <  2:5355884/93‑1 (MQ=255)
   aaaaGCCTAACCCAGCGATCAAAAAAGCGTCGATTTAAGGGTTGCACAAGGCGTGAGATTCGAATACAATTTCGCGCCTTTTGTTTTTAg‑ggg                                                                                      <  2:494724/93‑2 (MQ=255)
   aaaaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑ggg                                                                                      <  2:1414734/93‑2 (MQ=255)
    aaaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑gtgc                                                                                     >  1:3237030/1‑90 (MQ=255)
    aaaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑gggc                                                                                     >  2:3319486/1‑91 (MQ=255)
    aaaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑gggc                                                                                     <  2:1129720/93‑3 (MQ=255)
     aaGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑gggcc                                                                                    >  1:3738466/1‑90 (MQ=255)
        ccTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCTTGGGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTg                                                                                  <  1:275161/93‑1 (MQ=255)
         cTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGc                                                                                 >  1:535711/1‑93 (MQ=255)
         cTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGc                                                                                 <  1:886610/93‑1 (MQ=255)
         cTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGc                                                                                 <  1:3959319/93‑1 (MQ=255)
           aaCCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGccc                                                                               >  2:4762501/1‑93 (MQ=255)
           aaCCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGccc                                                                               >  1:3514994/1‑93 (MQ=255)
             cccAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGt                                                                             <  1:1833114/93‑1 (MQ=255)
             cccAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGt                                                                             <  2:7265219/93‑1 (MQ=255)
              ccAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTa                                                                            >  2:3156439/1‑93 (MQ=255)
              ccAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTa                                                                            >  1:5327267/1‑93 (MQ=255)
                 gCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTaaaa                                                                         <  1:1039916/93‑1 (MQ=255)
                  cGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAAc                                                                        <  2:5864163/93‑1 (MQ=255)
                  cGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAAc                                                                        >  2:1702024/1‑93 (MQ=255)
                   gATCAAAAAAGCGGCGATTTAATCTTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACg                                                                       <  1:5209370/93‑1 (MQ=255)
                   gATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACg                                                                       >  2:3299962/1‑93 (MQ=255)
                    aTCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGa                                                                      <  1:2068899/93‑1 (MQ=255)
                    aTCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGa                                                                      >  2:6605608/1‑93 (MQ=255)
                     tCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAt                                                                     <  2:3988702/93‑1 (MQ=255)
                     acAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAt                                                                     <  1:1586844/92‑1 (MQ=255)
                       aaaaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAttt                                                                   >  2:6913882/1‑93 (MQ=255)
                       aaaaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTNTGTTTTTATGGGCCTTGCCCGTAAAACGAttt                                                                   >  2:3874008/1‑93 (MQ=255)
                        aaaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAtttt                                                                  >  2:2487190/1‑93 (MQ=255)
                         aaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAttttt                                                                 >  1:406029/1‑93 (MQ=255)
                         aaaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAttttt                                                                 <  1:7609009/93‑1 (MQ=255)
                          aaaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAtttttt                                                                >  2:3749706/1‑93 (MQ=255)
                           aaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTta                                                               <  2:1915224/93‑1 (MQ=255)
                           aaGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTta                                                               <  2:7119643/93‑1 (MQ=255)
                             gcggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTtata                                                             >  1:2461461/1‑93 (MQ=255)
                             gcggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTtata                                                             <  2:4504810/93‑1 (MQ=255)
                              cggcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTatat                                                            <  1:1720500/93‑1 (MQ=255)
                                gcgATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCa                                                          >  1:3868893/1‑93 (MQ=255)
                                gcgATTTAATCGTTGCACAAGGAGAGTGATTGGAATACAATTTAGCGCCTATTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTTTATCa                                                          >  2:3392890/1‑93 (MQ=255)
                                  gATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCagg                                                        >  1:1948568/1‑91 (MQ=255)
                                   aTTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACgg                                                       <  1:617860/93‑1 (MQ=255)
                                   aTTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACgg                                                       >  2:5719733/1‑93 (MQ=255)
                                   aTTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACgg                                                       >  2:4430459/1‑93 (MQ=255)
                                    tttAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACggg                                                      <  1:4687700/93‑1 (MQ=255)
                                         tCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGcc                                                 >  2:5202505/1‑93 (MQ=255)
                                          cGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCct                                                >  2:6089445/1‑93 (MQ=255)
                                           gTTGCACAAGGCGTGAGGTTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGCGAGCctc                                               >  1:4934601/1‑93 (MQ=255)
                                           gTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCctc                                               <  2:4779767/93‑1 (MQ=255)
                                           gTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCctc                                               <  1:7170957/93‑1 (MQ=255)
                                           gTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCctc                                               <  1:2619846/93‑1 (MQ=255)
                                            ttGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCctct                                              >  1:4581395/1‑93 (MQ=255)
                                            ttGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCctct                                              >  1:6305613/1‑93 (MQ=255)
                                              gCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCa                                            <  1:1791060/93‑1 (MQ=255)
                                               cacaAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCag                                           >  1:5883160/1‑93 (MQ=255)
                                                acaAGGGGTGAGATTGGAATACAATTGCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCaga                                          <  1:6845943/93‑1 (MQ=255)
                                                acaAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCaga                                          >  1:6481097/1‑93 (MQ=255)
                                                acaAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCaga                                          >  1:7427633/1‑93 (MQ=255)
                                                acaAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCaga                                          <  1:144028/93‑1 (MQ=255)
                                                    ggCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCg                                      >  2:418017/1‑93 (MQ=255)
                                                    ggCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCg                                      >  2:262260/1‑93 (MQ=255)
                                                    ggCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCg                                      >  2:2735674/1‑93 (MQ=255)
                                                     gCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGt                                     <  1:7688818/93‑1 (MQ=255)
                                                      cGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGtt                                    >  2:511457/1‑93 (MQ=255)
                                                       gTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGtta                                   <  2:1263247/93‑1 (MQ=255)
                                                       gTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGtta                                   <  2:649537/93‑1 (MQ=255)
                                                       gTGAGATTGGAATACAATTTCGCGCCTTTTGTTATTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGtta                                   <  2:7030658/93‑1 (MQ=255)
                                                        tGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGttat                                  <  1:1678231/93‑1 (MQ=255)
                                                        tGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGttat                                  >  1:137390/1‑93 (MQ=255)
                                                             ttGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAccc                             >  1:7121628/1‑93 (MQ=255)
                                                               ggAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCaa                           >  1:4523970/1‑93 (MQ=255)
                                                               ggAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCaa                           >  1:2992715/1‑93 (MQ=255)
                                                                 aaTACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACt                         >  2:5304939/1‑93 (MQ=255)
                                                                 aaTACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACt                         >  2:7822225/1‑93 (MQ=255)
                                                                  aTACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACtt                        >  2:1078958/1‑93 (MQ=255)
                                                                  aTACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACtt                        <  2:1976664/93‑1 (MQ=255)
                                                                   tACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTg                       >  1:4249295/1‑93 (MQ=255)
                                                                   tACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTg                       >  1:5055026/1‑93 (MQ=255)
                                                                   tACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTATATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTg                       >  2:745238/1‑93 (MQ=255)
                                                                     cAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAg                     <  2:427861/93‑1 (MQ=255)
                                                                      aaTTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGTAGCCTCTCAGAGGCGTTATTACCCAACTTGAgg                    >  2:6816155/1‑93 (MQ=255)
                                                                         ttCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAt                 <  1:1138878/93‑1 (MQ=255)
                                                                           cgcgCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAttt               <  2:1548010/93‑1 (MQ=255)
                                                                           cgcgCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAttt               <  1:5941428/93‑1 (MQ=255)
                                                                            gcgcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTta              >  2:295613/1‑93 (MQ=255)
                                                                              gcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTtata            <  2:6011494/93‑1 (MQ=255)
                                                                              gcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTtata            <  2:7640050/93‑1 (MQ=255)
                                                                              gcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTtata            >  1:2219901/1‑93 (MQ=255)
                                                                              gcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTtata            <  1:4766782/93‑1 (MQ=255)
                                                                              gcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTtata            <  1:729683/93‑1 (MQ=255)
                                                                               ccTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGGGTTATTACCCAACTTGAGGAATTTATaa           <  2:5021041/93‑1 (MQ=255)
                                                                               ccTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATaa           <  1:5769805/93‑1 (MQ=255)
                                                                               ccTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATaa           >  2:1738364/1‑93 (MQ=255)
                                                                                cTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTCCCCAACTTGAGGAATTTATAAt          <  2:1204339/93‑1 (MQ=255)
                                                                                    tGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACGTGAGGAATTTATAATGGCt      <  1:5498118/93‑1 (MQ=255)
                                                                                      tttttATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTaa    >  1:699874/1‑93 (MQ=255)
                                                                                      tttttATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTaa    <  1:7888851/93‑1 (MQ=255)
                                                                                      tttttATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTaa    <  2:3588635/93‑1 (MQ=255)
                                                                                       ttttATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGCGGAATTTATAATGGCTAAg   <  2:4647180/93‑1 (MQ=255)
                                                                                             |                                                                                       
TGAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTAT‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA  >  NC_000913/4175855‑4176034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑AT‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  >  NC_000913/4175856‑4176042
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GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑AT‑GG                                                                                               <  SRR4302543.7843545/94‑1 (MQ=60)
GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑AT‑GG                                                                                               <  SRR4302543.2774860/94‑1 (MQ=60)
GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑AT‑GG                                                                                               <  SRR4302543.5985489/94‑1 (MQ=60)
 AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑AT‑GGG                                                                                              <  SRR4302543.2480923/94‑1 (MQ=60)
 AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑AT‑GGG                                                                                              <  SRR4302543.3795719/94‑1 (MQ=60)
 AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑AT‑GGG                                                                                              <  SRR4302543.7716261/94‑1 (MQ=60)
  AAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑AT‑GGGC                                                                                             >  SRR4302543.7289062/1‑94 (MQ=60)
   AAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑AT‑GGgcc                                                                                            >  SRR4302543.4606703/1‑91 (MQ=60)
   AAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑AT‑GGgcc                                                                                            >  SRR4302543.3771353/1‑91 (MQ=60)
     AGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTT                                                                                           >  SRR4302543.1063755/1‑94 (MQ=60)
     AGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTT                                                                                           >  SRR4302543.252592/1‑94 (MQ=60)
      ACCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTG                                                                                          <  SRR4302543.1294041/94‑1 (MQ=60)
       CCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCTTGGGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGC                                                                                         <  SRR4302543.277592/94‑1 (MQ=60)
       CCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGC                                                                                         >  SRR4302543.540676/1‑94 (MQ=60)
        CTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCC                                                                                        <  SRR4302543.3994373/94‑1 (MQ=60)
        CTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCC                                                                                        <  SRR4302543.894463/94‑1 (MQ=60)
         TAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCC                                                                                       <  SRR4302543.5045320/94‑1 (MQ=60)
         TAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCC                                                                                       >  SRR4302543.4689464/1‑94 (MQ=60)
         TAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCC                                                                                       >  SRR4302543.3546391/1‑94 (MQ=60)
         TAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTCGCCC                                                                                       <  SRR4302543.5045122/94‑1 (MQ=60)
            CCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTA                                                                                    >  SRR4302543.5375435/1‑94 (MQ=60)
            CCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTA                                                                                    <  SRR4302543.1849604/94‑1 (MQ=60)
             CCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAA                                                                                   >  SRR4302543.5949789/1‑94 (MQ=60)
                GCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAAC                                                                                <  SRR4302543.4011469/94‑1 (MQ=60)
                GCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAAC                                                                                <  SRR4302543.1049178/94‑1 (MQ=60)
                GCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAAC                                                                                <  SRR4302543.1049177/94‑1 (MQ=60)
                GCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAAC                                                                                <  SRR4302543.6349444/94‑1 (MQ=60)
                 CGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACG                                                                               >  SRR4302543.3415119/1‑94 (MQ=60)
                  GATCAAAAAAGCGGCGATTTAATCTTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGA                                                                              <  SRR4302543.5256308/94‑1 (MQ=60)
                  GATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGA                                                                              >  SRR4302543.1667731/1‑94 (MQ=60)
                   ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGAT                                                                             <  SRR4302543.7343813/94‑1 (MQ=60)
                   ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGAT                                                                             >  SRR4302543.7779706/1‑94 (MQ=60)
                   ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGAT                                                                             <  SRR4302543.2087390/94‑1 (MQ=60)
                    ACAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATT                                                                            <  SRR4302543.1601015/94‑1 (MQ=60)
                     CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTT                                                                           >  SRR4302543.6301620/1‑94 (MQ=60)
                     CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTT                                                                           >  SRR4302543.7569084/1‑94 (MQ=60)
                      AAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTT                                                                          >  SRR4302543.2981581/1‑94 (MQ=60)
                      AAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTT                                                                          >  SRR4302543.839450/1‑94 (MQ=60)
                      AAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTT                                                                          >  SRR4302543.4834379/1‑94 (MQ=60)
                      AAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTT                                                                          >  SRR4302543.170986/1‑94 (MQ=60)
                       AAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTT                                                                         >  SRR4302543.409773/1‑94 (MQ=60)
                        AAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAACACGATTTTTT                                                                        >  SRR4302543.866284/1‑94 (MQ=60)
                        AAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTT                                                                        <  SRR4302543.901641/94‑1 (MQ=60)
                        AAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTT                                                                        <  SRR4302543.6311171/94‑1 (MQ=60)
                        AAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTT                                                                        <  SRR4302543.7681250/94‑1 (MQ=60)
                         AAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTA                                                                       <  SRR4302543.3206154/94‑1 (MQ=60)
                          AAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTAT                                                                      <  SRR4302543.7488668/94‑1 (MQ=60)
                          AAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTAT                                                                      <  SRR4302543.7500421/94‑1 (MQ=60)
                          AAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTAT                                                                      <  SRR4302543.2023472/94‑1 (MQ=60)
                           AGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATA                                                                     >  SRR4302543.2483652/1‑94 (MQ=60)
                           AGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATA                                                                     >  SRR4302543.5465226/1‑94 (MQ=60)
                             CGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATC                                                                   <  SRR4302543.1752150/94‑1 (MQ=60)
                             CGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATC                                                                   >  SRR4302543.1642335/1‑94 (MQ=60)
                             CGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATC                                                                   <  SRR4302543.1735851/94‑1 (MQ=60)
                              GGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCA                                                                  >  SRR4302543.3903057/1‑94 (MQ=60)
                               GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCAC                                                                 >  SRR4302543.6786163/1‑94 (MQ=60)
                                CGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCAGG                                                                >  SRR4302543.1966050/1‑94 (MQ=60)
                                CGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACG                                                                <  SRR4302543.5724762/94‑1 (MQ=60)
                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               <  SRR4302543.2506248/94‑1 (MQ=60)
                                  ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              >  SRR4302543.3263663/1‑94 (MQ=60)
                                  ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              <  SRR4302543.1573211/94‑1 (MQ=60)
                                  ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              <  SRR4302543.623512/94‑1 (MQ=60)
                                   TTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGG                                                             <  SRR4302543.4730478/94‑1 (MQ=60)
                                   TTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGG                                                             <  SRR4302543.1942433/94‑1 (MQ=60)
                                    TTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGA                                                            <  SRR4302543.2629236/94‑1 (MQ=60)
                                     TAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAG                                                           >  SRR4302543.1384275/1‑94 (MQ=60)
                                     TAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAG                                                           >  SRR4302543.4776324/1‑94 (MQ=60)
                                      AATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGC                                                          >  SRR4302543.4579618/1‑94 (MQ=60)
                                      AATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGC                                                          <  SRR4302543.4557257/94‑1 (MQ=60)
                                       ATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCC                                                         >  SRR4302543.2827002/1‑94 (MQ=60)
                                        TCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCT                                                        <  SRR4302543.1408050/94‑1 (MQ=60)
                                        TCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCT                                                        <  SRR4302543.4535942/94‑1 (MQ=60)
                                         CGTTGCACAAGGCGTGAGGTTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGCGAGCCTC                                                       >  SRR4302543.4979549/1‑94 (MQ=60)
                                         CGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTC                                                       <  SRR4302543.2177155/94‑1 (MQ=60)
                                         CGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTC                                                       >  SRR4302543.4979550/1‑94 (MQ=60)
                                         CGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTC                                                       >  SRR4302543.1634363/1‑94 (MQ=60)
                                         CGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTC                                                       >  SRR4302543.1460034/1‑94 (MQ=60)
                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      <  SRR4302543.2643588/94‑1 (MQ=60)
                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      <  SRR4302543.4453372/94‑1 (MQ=60)
                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      <  SRR4302543.7240587/94‑1 (MQ=60)
                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      >  SRR4302543.4623027/1‑94 (MQ=60)
                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      >  SRR4302543.6364926/1‑94 (MQ=60)
                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCC                                                      >  SRR4302543.677871/1‑94 (MQ=60)
                                            TGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCA                                                    >  SRR4302543.5793675/1‑94 (MQ=60)
                                             GCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAG                                                   >  SRR4302543.5169503/1‑94 (MQ=60)
                                             GCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAG                                                   <  SRR4302543.1807091/94‑1 (MQ=60)
                                             GCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAG                                                   >  SRR4302543.5936779/1‑94 (MQ=60)
                                              CACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTATAACGATTTTTTATATCACGGGGAGCCTCTCAGA                                                  >  SRR4302543.7708072/1‑94 (MQ=60)
                                              CACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGA                                                  >  SRR4302543.6542159/1‑94 (MQ=60)
                                              CACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGA                                                  >  SRR4302543.967663/1‑94 (MQ=60)
                                              CACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGA                                                  >  SRR4302543.7498851/1‑94 (MQ=60)
                                               ACAAGGGGTGAGATTGGAATACAATTGCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAG                                                 <  SRR4302543.6910539/94‑1 (MQ=60)
                                               ACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAG                                                 <  SRR4302543.4696662/94‑1 (MQ=60)
                                               ACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAG                                                 >  SRR4302543.6402905/1‑94 (MQ=60)
                                               ACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAG                                                 <  SRR4302543.145280/94‑1 (MQ=60)
                                                CAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGG                                                <  SRR4302543.7286885/94‑1 (MQ=60)
                                                 AAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGC                                               <  SRR4302543.1830203/94‑1 (MQ=60)
                                                  AGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCG                                              <  SRR4302543.897693/94‑1 (MQ=60)
                                                  AGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCG                                              >  SRR4302543.1841903/1‑94 (MQ=60)
                                                   GGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGT                                             >  SRR4302543.2223689/1‑94 (MQ=60)
                                                   GGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGT                                             >  SRR4302543.6937562/1‑94 (MQ=60)
                                                    GCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTT                                            <  SRR4302543.1415511/94‑1 (MQ=60)
                                                    GCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTT                                            <  SRR4302543.7761623/94‑1 (MQ=60)
                                                     CGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTA                                           >  SRR4302543.7153183/1‑94 (MQ=60)
                                                      GTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTAT                                          >  SRR4302543.138605/1‑94 (MQ=60)
                                                      GTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTAT                                          >  SRR4302543.3617432/1‑94 (MQ=60)
                                                      GTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTAT                                          >  SRR4302543.5466000/1‑94 (MQ=60)
                                                      GTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTAT                                          <  SRR4302543.2863153/94‑1 (MQ=60)
                                                      GTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTAT                                          >  SRR4302543.518178/1‑94 (MQ=60)
                                                       TGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATT                                         >  SRR4302543.5804189/1‑94 (MQ=60)
                                                       TGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATT                                         <  SRR4302543.1693279/94‑1 (MQ=60)
                                                        GAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTA                                        >  SRR4302543.5841283/1‑94 (MQ=60)
                                                         AGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAC                                       <  SRR4302543.5380791/94‑1 (MQ=60)
                                                         AGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAC                                       >  SRR4302543.4029164/1‑94 (MQ=60)
                                                         AGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAC                                       <  SRR4302543.5380792/94‑1 (MQ=60)
                                                         AGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAC                                       >  SRR4302543.6449199/1‑94 (MQ=60)
                                                          GATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACC                                      <  SRR4302543.7223877/94‑1 (MQ=60)
                                                          GATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACC                                      >  SRR4302543.1091546/1‑94 (MQ=60)
                                                          GATTGAAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTGCC                                      <  SRR4302543.4777078/94‑1 (MQ=60)
                                                           ATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGTCTCTCAGAGGCGTTATTACCC                                     >  SRR4302543.7157678/1‑94 (MQ=60)
                                                           ATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCC                                     >  SRR4302543.1396023/1‑94 (MQ=60)
                                                           ATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCC                                     >  SRR4302543.6976245/1‑94 (MQ=60)
                                                           ATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCC                                     <  SRR4302543.3278673/94‑1 (MQ=60)
                                                           ATTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCC                                     >  SRR4302543.7190814/1‑94 (MQ=60)
                                                            TTGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCA                                    <  SRR4302543.4635489/94‑1 (MQ=60)
                                                             TGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAA                                   >  SRR4302543.7192465/1‑94 (MQ=60)
                                                             TGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAA                                   >  SRR4302543.3019877/1‑94 (MQ=60)
                                                             TGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAA                                   >  SRR4302543.2544982/1‑94 (MQ=60)
                                                             TGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAA                                   >  SRR4302543.4913101/1‑94 (MQ=60)
                                                             TGGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAA                                   >  SRR4302543.4565125/1‑94 (MQ=60)
                                                              GGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAC                                  >  SRR4302543.7607226/1‑94 (MQ=60)
                                                              GGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAC                                  <  SRR4302543.5868067/94‑1 (MQ=60)
                                                              GGAATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAC                                  <  SRR4302543.6156631/94‑1 (MQ=60)
                                                                AATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTT                                <  SRR4302543.4116543/94‑1 (MQ=60)
                                                                AATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTT                                >  SRR4302543.3921664/1‑94 (MQ=60)
                                                                AATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTT                                >  SRR4302543.2092249/1‑94 (MQ=60)
                                                                 ATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTG                               >  SRR4302543.4287858/1‑94 (MQ=60)
                                                                 ATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTG                               >  SRR4302543.5100982/1‑94 (MQ=60)
                                                                 ATACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTG                               >  SRR4302543.2056218/1‑94 (MQ=60)
                                                                   ACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAG                             <  SRR4302543.3793784/94‑1 (MQ=60)
                                                                   ACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAG                             <  SRR4302543.1717275/94‑1 (MQ=60)
                                                                   ACAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAG                             <  SRR4302543.1783067/94‑1 (MQ=60)
                                                                    CAATTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGG                            <  SRR4302543.5268881/94‑1 (MQ=60)
                                                                       TTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAT                         <  SRR4302543.3862853/94‑1 (MQ=60)
                                                                       TTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAT                         <  SRR4302543.1294760/94‑1 (MQ=60)
                                                                       TTTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAT                         <  SRR4302543.7489444/94‑1 (MQ=60)
                                                                        TTCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATT                        <  SRR4302543.1149248/94‑1 (MQ=60)
                                                                         TCGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTT                       <  SRR4302543.3978594/94‑1 (MQ=60)
                                                                          CGCGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      <  SRR4302543.5995794/94‑1 (MQ=60)
                                                                           GCGCCTTTTGTTTTTAAG‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTAT                     <  SRR4302543.7113806/94‑1 (MQ=60)
                                                                            CGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATA                    >  SRR4302543.2239930/1‑94 (MQ=60)
                                                                            CGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATA                    >  SRR4302543.6043492/1‑94 (MQ=60)
                                                                            CGCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATA                    >  SRR4302543.4061233/1‑94 (MQ=60)
                                                                             GCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   >  SRR4302543.497734/1‑94 (MQ=60)
                                                                             GCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   <  SRR4302543.4810346/94‑1 (MQ=60)
                                                                             GCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   <  SRR4302543.736230/94‑1 (MQ=60)
                                                                             GCCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   <  SRR4302543.5970605/94‑1 (MQ=60)
                                                                              CCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAT                  <  SRR4302543.5225907/94‑1 (MQ=60)
                                                                              CCTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAT                  <  SRR4302543.5822349/94‑1 (MQ=60)
                                                                               CTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 >  SRR4302543.3612033/1‑94 (MQ=60)
                                                                               CTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 <  SRR4302543.5381993/94‑1 (MQ=60)
                                                                               CTTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 >  SRR4302543.2678049/1‑94 (MQ=60)
                                                                                TTTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGG                <  SRR4302543.7896696/94‑1 (MQ=60)
                                                                                 TTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGC               >  SRR4302543.2446169/1‑94 (MQ=60)
                                                                                 TTTGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGC               >  SRR4302543.4145476/1‑94 (MQ=60)
                                                                                   TGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGCATTTATAATGGCTA             >  SRR4302543.3369605/1‑94 (MQ=60)
                                                                                   TGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTA             >  SRR4302543.6858390/1‑94 (MQ=60)
                                                                                   TGTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACGTGAGGAATTTATAATGGCTA             <  SRR4302543.5547994/94‑1 (MQ=60)
                                                                                    GTTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAA            >  SRR4302543.706276/1‑94 (MQ=60)
                                                                                     TTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAG           <  SRR4302543.7963056/94‑1 (MQ=60)
                                                                                     TTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAG           <  SRR4302543.5368876/94‑1 (MQ=60)
                                                                                     TTTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAA           >  SRR4302543.1878857/1‑94 (MQ=60)
                                                                                      TTTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA          >  SRR4302543.1742073/1‑94 (MQ=60)
                                                                                       TTT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAA         >  SRR4302543.6405350/1‑94 (MQ=60)
                                                                                        TT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGCGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAA        >  SRR4302543.819486/1‑94 (MQ=60)
                                                                                        TT‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAA        <  SRR4302543.455459/94‑1 (MQ=60)
                                                                                         T‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGACAG       >  SRR4302543.3863082/1‑94 (MQ=60)
                                                                                         T‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAG       <  SRR4302543.5193399/94‑1 (MQ=60)
                                                                                         T‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAG       <  SRR4302543.4853228/94‑1 (MQ=60)
                                                                                         T‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAG       <  SRR4302543.5193400/94‑1 (MQ=60)
                                                                                         T‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAG       >  SRR4302543.5203632/1‑94 (MQ=60)
                                                                                         T‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAG       <  SRR4302543.876830/94‑1 (MQ=60)
                                                                                         T‑ATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAG       <  SRR4302543.5500556/94‑1 (MQ=60)
                                                                                           atgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGT      <  SRR4302543.6662966/91‑1 (MQ=60)
                                                                                           atgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGT      >  SRR4302543.874689/4‑94 (MQ=60)
                                                                                           atgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGT      <  SRR4302543.1092229/91‑1 (MQ=60)
                                                                                           atgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGT      <  SRR4302543.562606/91‑1 (MQ=60)
                                                                                            tgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTA     <  SRR4302543.5896269/92‑1 (MQ=60)
                                                                                            tgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTA     >  SRR4302543.6879465/3‑94 (MQ=60)
                                                                                            G‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTAC    <  SRR4302543.5591474/94‑1 (MQ=60)
                                                                                              GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACA   >  SRR4302543.5006713/1‑94 (MQ=60)
                                                                                               GCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  <  SRR4302543.4094202/94‑1 (MQ=60)
                                                                                               |                                                                                             
GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTT‑AT‑GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  >  NC_000913/4175856‑4176042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑