Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,176,909 A→G E151E (GAA→GAG)  rplA → 50S ribosomal subunit protein L1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,176,9090AG100.0% 926.9 / NA 295E151E (GAA→GAG) rplA50S ribosomal subunit protein L1
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (150/145);  total (150/145)

Only 100 of 303 total aligned reads displayed.

GCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGA  >  NC_000913/4176819‑4176998
                                                                                          |                                                                                         
gcgcGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGc                                                                                         <  1:4104113/93‑1 (MQ=255)
    gttgttGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGtt                                                                                     >  1:1075849/1‑93 (MQ=255)
    gttgttGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGtt                                                                                     >  1:1004252/1‑93 (MQ=255)
    gttgttGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGtt                                                                                     >  1:1512389/1‑93 (MQ=255)
     ttgttgGCCAGCTGGGCCCGGTTCTGGGTCCGCGCGGCCTGCTGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTa                                                                                    >  2:3964207/1‑93 (MQ=255)
     ttgttgGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTa                                                                                    >  1:6774314/1‑93 (MQ=255)
      tgttgGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTaa                                                                                   >  2:545965/1‑93 (MQ=255)
            gcAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACGCCGAACGTTGCTGAGGCGGTTAAAAACGc                                                                             <  2:2165870/92‑1 (MQ=255)
             cAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCt                                                                            >  1:5435796/1‑93 (MQ=255)
             cAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGCTGCTGAGGCGGTTAAAAACGCt                                                                            >  2:7915503/1‑93 (MQ=255)
              aGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTa                                                                           <  1:2257604/93‑1 (MQ=255)
              aGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTa                                                                           <  1:3226092/93‑1 (MQ=255)
                cTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTaaa                                                                         >  1:6207236/1‑93 (MQ=255)
                cTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTaaa                                                                         <  1:5200673/93‑1 (MQ=255)
                cTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTaaa                                                                         <  2:2838682/93‑1 (MQ=255)
                cTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTaaa                                                                         >  2:3244099/1‑93 (MQ=255)
                cTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTaaa                                                                         <  1:2154556/93‑1 (MQ=255)
                 tGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAg                                                                        >  2:6083567/1‑93 (MQ=255)
                  gggCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTaagct                                                                       <  1:1674510/93‑4 (MQ=255)
                   ggCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCt                                                                      <  2:5986195/93‑1 (MQ=255)
                   ggCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCt                                                                      >  1:4710637/1‑93 (MQ=255)
                      cAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGATAAAAACGCTAAAGCTGGc                                                                   >  2:3382378/1‑93 (MQ=255)
                       aGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAGAGCTGGcc                                                                  <  1:1782719/93‑1 (MQ=255)
                        ggTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCa                                                                 >  1:6582100/1‑93 (MQ=255)
                         gTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGCAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAg                                                                >  2:4196141/1‑93 (MQ=255)
                         gTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAg                                                                >  1:4264871/1‑93 (MQ=255)
                         gTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAg                                                                <  2:1650111/93‑1 (MQ=255)
                          ttCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAgg                                                               >  2:3679056/1‑93 (MQ=255)
                          ttCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAgg                                                               <  2:6203552/93‑1 (MQ=255)
                          ttCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAgg                                                               <  1:4311939/93‑1 (MQ=255)
                           tCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGt                                                              >  1:4508097/1‑93 (MQ=255)
                           tCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGt                                                              <  2:1236997/93‑1 (MQ=255)
                           tCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGt                                                              <  1:1905449/93‑1 (MQ=255)
                            cTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGtt                                                             <  1:6327059/93‑1 (MQ=255)
                                gTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGtt                                                         >  2:6928163/1‑93 (MQ=255)
                                gTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGtt                                                         <  2:881686/93‑1 (MQ=255)
                                 tCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTa                                                        <  1:4543157/93‑1 (MQ=255)
                                  ccGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTAc                                                       >  2:5728945/1‑93 (MQ=255)
                                  ccGCGCGGACTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTAc                                                       <  2:7007998/93‑1 (MQ=255)
                                    gcgcgGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCg                                                     >  2:2369019/1‑93 (MQ=255)
                                     cgcgGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGt                                                    <  2:2280537/93‑1 (MQ=255)
                                        ggCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAAc                                                 <  2:7513910/93‑1 (MQ=255)
                                         gCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAGAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACg                                                >  1:740139/1‑93 (MQ=255)
                                         gCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACg                                                >  1:5780064/1‑93 (MQ=255)
                                          ccTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGa                                               >  1:2794724/1‑93 (MQ=255)
                                            tGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACa                                             <  1:3112965/93‑1 (MQ=255)
                                            tGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGACCAGGTTCGTTACCGTAACGACa                                             >  2:5654877/1‑93 (MQ=255)
                                             gATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACaa                                            >  1:7889315/1‑93 (MQ=255)
                                              aTGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACaaa                                           >  1:7733795/1‑93 (MQ=255)
                                                gCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACaaaaa                                         <  2:306390/93‑1 (MQ=255)
                                                 ccAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTTACGACAAAAAc                                        <  2:7800910/93‑1 (MQ=255)
                                                 ccAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAAc                                        <  1:2547077/93‑1 (MQ=255)
                                                 ccAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAAc                                        <  2:4562898/93‑1 (MQ=255)
                                                    aaCCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACaaaaaagca                                     >  2:5328496/1‑89 (MQ=255)
                                                    aaCCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGc                                     >  1:6236731/1‑93 (MQ=255)
                                                      cccGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGcat                                   <  1:1577210/93‑1 (MQ=255)
                                                      cccGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGcat                                   <  1:6464658/93‑1 (MQ=255)
                                                       ccGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGcatc                                  <  1:5073588/93‑1 (MQ=255)
                                                           aaGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATcc                              >  1:905473/1‑93 (MQ=255)
                                                           aaGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATcc                              >  2:3582054/1‑93 (MQ=255)
                                                            aGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCca                             <  1:1460516/93‑1 (MQ=255)
                                                             gTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCcac                            >  2:6631777/1‑93 (MQ=255)
                                                             gTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCcac                            <  1:7312461/93‑1 (MQ=255)
                                                                 gTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCAcacca                        >  2:1439712/1‑93 (MQ=255)
                                                                  tACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCAcaccac                       >  1:5671699/1‑93 (MQ=255)
                                                                    cTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACAccacca                     >  2:3851684/1‑93 (MQ=255)
                                                                    cTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACAccacca                     <  2:5588968/93‑1 (MQ=255)
                                                                     tGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACAccaccac                    >  2:6240478/1‑92 (MQ=255)
                                                                     tGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCAt                    >  2:513590/1‑93 (MQ=255)
                                                                     tGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCAt                    <  1:4187279/93‑1 (MQ=255)
                                                                     tGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCAt                    >  2:2541642/1‑93 (MQ=255)
                                                                     tGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCAt                    >  1:1346823/1‑93 (MQ=255)
                                                                      gTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATc                   <  1:2464627/93‑1 (MQ=255)
                                                                       tAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCg                  <  1:6030534/93‑1 (MQ=255)
                                                                        aaCACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCgg                 <  1:3560792/93‑1 (MQ=255)
                                                                        aaCACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCgg                 >  1:6296612/1‑93 (MQ=255)
                                                                         acacCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGt                >  2:7258676/1‑93 (MQ=255)
                                                                          cacCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTa               <  1:383492/93‑1 (MQ=255)
                                                                          cacCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTa               >  1:7107500/1‑93 (MQ=255)
                                                                           acCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTaa              <  2:5004903/93‑1 (MQ=255)
                                                                           acCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTaa              <  1:4802988/93‑1 (MQ=255)
                                                                           acCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTaa              >  1:2225063/1‑93 (MQ=255)
                                                                            ccGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTaaa             <  1:3356392/93‑1 (MQ=255)
                                                                            ccGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTaaa             >  1:6090300/1‑93 (MQ=255)
                                                                             cGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAg            >  2:1038475/1‑93 (MQ=255)
                                                                             cGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAg            <  1:7199220/93‑1 (MQ=255)
                                                                              gAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGt           <  1:6640578/93‑1 (MQ=255)
                                                                              gAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGt           <  2:7425231/93‑1 (MQ=255)
                                                                                aCGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTgg         >  1:4956748/1‑93 (MQ=255)
                                                                                 cGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGa        >  1:4438719/1‑93 (MQ=255)
                                                                                 cGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGa        <  2:6316453/93‑1 (MQ=255)
                                                                                 cGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGa        <  1:7542731/93‑1 (MQ=255)
                                                                                   ttGCTGAGGAGGTAACAAAAGTTAATGCTGGCCAGGTTCCTTAAGTTAACGACAAAATCGGCATCAGACACACCCCCATCGGTAAAGTGGACt      <  2:2690397/93‑1 (MQ=255)
                                                                                   tgtcTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACt      <  2:201355/90‑1 (MQ=255)
                                                                                     gCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACttt    <  2:4426907/93‑1 (MQ=255)
                                                                                     gCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACttt    <  1:2782232/93‑1 (MQ=255)
                                                                                       tGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGa  <  1:6969037/93‑1 (MQ=255)
                                                                                       tGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGa  >  2:6470337/1‑93 (MQ=255)
                                                                                       tGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGa  >  2:2443670/1‑93 (MQ=255)
                                                                                       tGAGGCGGTGAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCGCCATCGGTAAAGTGGACTTTGa  <  2:7362155/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGA  >  NC_000913/4176819‑4176998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGACG  >  NC_000913/4176816‑4177000
                                                                                             |                                                                                           
ACTGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAG                                                                                             <  SRR4302543.1781550/94‑1 (MQ=60)
AATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAG                                                                                             <  SRR4302543.1208020/94‑1 (MQ=60)
AATGCGCGCTGTTGGCGAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAG                                                                                             <  SRR4302543.3963983/94‑1 (MQ=60)
 ATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGG                                                                                            >  SRR4302543.1696830/1‑94 (MQ=60)
 ATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGG                                                                                            <  SRR4302543.6762726/94‑1 (MQ=60)
 ATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGG                                                                                            <  SRR4302543.7114060/94‑1 (MQ=60)
 ATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGG                                                                                            >  SRR4302543.7379444/1‑94 (MQ=60)
 ATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGG                                                                                            <  SRR4302543.1091902/94‑1 (MQ=60)
   GCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCG                                                                                          <  SRR4302543.4141022/94‑1 (MQ=60)
   GCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCG                                                                                          >  SRR4302543.1572856/1‑94 (MQ=60)
      CGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTT                                                                                       >  SRR4302543.3490771/1‑94 (MQ=60)
      CGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTT                                                                                       >  SRR4302543.1085522/1‑94 (MQ=60)
      CGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTT                                                                                       >  SRR4302543.1013131/1‑94 (MQ=60)
      CGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTT                                                                                       >  SRR4302543.6168728/1‑94 (MQ=60)
      CGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTT                                                                                       >  SRR4302543.1525970/1‑94 (MQ=60)
      CGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTT                                                                                       <  SRR4302543.6360312/94‑1 (MQ=60)
       GTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTA                                                                                      >  SRR4302543.6838311/1‑94 (MQ=60)
       GTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTA                                                                                      >  SRR4302543.6838310/1‑94 (MQ=60)
         TGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAA                                                                                    >  SRR4302543.6121190/1‑94 (MQ=60)
         TGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAA                                                                                    <  SRR4302543.886287/94‑1 (MQ=60)
            TGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAAC                                                                                 <  SRR4302543.105572/94‑1 (MQ=60)
            TGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAAC                                                                                 <  SRR4302543.2227234/94‑1 (MQ=60)
             GGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACG                                                                                <  SRR4302543.3357824/94‑1 (MQ=60)
             GGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAAAG                                                                                >  SRR4302543.7520085/1‑94 (MQ=60)
               CCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCT                                                                              >  SRR4302543.5485169/1‑94 (MQ=60)
                CAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTA                                                                             >  SRR4302543.5143966/1‑94 (MQ=60)
                CAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTA                                                                             >  SRR4302543.7232002/1‑94 (MQ=60)
                 AGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAA                                                                            <  SRR4302543.3255257/94‑1 (MQ=60)
                 AGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAA                                                                            <  SRR4302543.2278158/94‑1 (MQ=60)
                  GCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAA                                                                           >  SRR4302543.5756822/1‑94 (MQ=60)
                  GCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAA                                                                           <  SRR4302543.4643779/94‑1 (MQ=60)
                  GCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAA                                                                           >  SRR4302543.6265844/1‑94 (MQ=60)
                   CTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAG                                                                          <  SRR4302543.5247562/94‑1 (MQ=60)
                   CTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAG                                                                          <  SRR4302543.937607/94‑1 (MQ=60)
                   CTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAG                                                                          <  SRR4302543.2173852/94‑1 (MQ=60)
                    TGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGC                                                                         <  SRR4302543.1630217/94‑1 (MQ=60)
                     GGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCT                                                                        >  SRR4302543.4753686/1‑94 (MQ=60)
                     GGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCT‑AAGCTG                                                                       <  SRR4302543.1689520/94‑1 (MQ=60)
                     GGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGGGGGCACTCTAACACCGAACGTTGCTGAGGCGGGTAAAAcacctaaaccc                                                                        >  SRR4302543.4753684/1‑83 (MQ=60)
                      GGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTG                                                                       >  SRR4302543.7262070/1‑94 (MQ=60)
                      GGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTG                                                                       <  SRR4302543.6277036/94‑1 (MQ=60)
                       GCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGG                                                                      <  SRR4302543.4840307/94‑1 (MQ=60)
                        CCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGC                                                                     <  SRR4302543.3369306/94‑1 (MQ=60)
                         CAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCC                                                                    <  SRR4302543.4620296/94‑1 (MQ=60)
                          AGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAGAGCTGGCCA                                                                   <  SRR4302543.1798659/94‑1 (MQ=60)
                          AGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCA                                                                   >  SRR4302543.6644090/1‑94 (MQ=60)
                          AGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCA                                                                   >  SRR4302543.7655904/1‑94 (MQ=60)
                          AGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCA                                                                   >  SRR4302543.7641375/1‑94 (MQ=60)
                          AGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCA                                                                   <  SRR4302543.2818839/94‑1 (MQ=60)
                           GGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAG                                                                  >  SRR4302543.7272004/1‑94 (MQ=60)
                           GGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAG                                                                  >  SRR4302543.4303608/1‑94 (MQ=60)
                           GGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAG                                                                  >  SRR4302543.3075276/1‑94 (MQ=60)
                            GTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGG                                                                 <  SRR4302543.4325342/94‑1 (MQ=60)
                            GTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGG                                                                 >  SRR4302543.318264/1‑94 (MQ=60)
                             TTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGT                                                                >  SRR4302543.4549088/1‑94 (MQ=60)
                             TTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGT                                                                <  SRR4302543.4351105/94‑1 (MQ=60)
                             TTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAAAGCTAAAGCTGGCCAGGT                                                                >  SRR4302543.4549089/1‑94 (MQ=60)
                              TCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTT                                                               <  SRR4302543.6521893/94‑1 (MQ=60)
                              TCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTT                                                               <  SRR4302543.1922607/94‑1 (MQ=60)
                              TCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTT                                                               >  SRR4302543.5890598/1‑94 (MQ=60)
                               CTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTC                                                              <  SRR4302543.5005468/94‑1 (MQ=60)
                               CTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTC                                                              <  SRR4302543.6386564/94‑1 (MQ=60)
                               CTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTC                                                              <  SRR4302543.3555152/94‑1 (MQ=60)
                               CTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTC                                                              <  SRR4302543.5523345/94‑1 (MQ=60)
                                TGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCG                                                             <  SRR4302543.1576998/94‑1 (MQ=60)
                                  GGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTT                                                           >  SRR4302543.6526656/1‑94 (MQ=60)
                                  GGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTT                                                           <  SRR4302543.2148817/94‑1 (MQ=60)
                                    TCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTAC                                                         <  SRR4302543.4584527/94‑1 (MQ=60)
                                     CCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACC                                                        <  SRR4302543.6628938/94‑1 (MQ=60)
                                      CGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCG                                                       >  SRR4302543.147791/1‑94 (MQ=60)
                                      CGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCG                                                       <  SRR4302543.5404663/94‑1 (MQ=60)
                                      CGCGCGGCCTGATGCCAAACCCGAAAGGGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCG                                                       <  SRR4302543.1717289/94‑1 (MQ=60)
                                       GCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGT                                                      <  SRR4302543.6264654/94‑1 (MQ=60)
                                       GCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGT                                                      <  SRR4302543.1208903/94‑1 (MQ=60)
                                         GCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAA                                                    <  SRR4302543.5656121/94‑1 (MQ=60)
                                          CGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGCCCAGGTTCGATACCGTAAC                                                   >  SRR4302543.2266853/1‑94 (MQ=60)
                                           GGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAGAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACG                                                  >  SRR4302543.746753/1‑94 (MQ=60)
                                           GGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACG                                                  >  SRR4302543.5832668/1‑94 (MQ=60)
                                           GGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACG                                                  >  SRR4302543.4900304/1‑94 (MQ=60)
                                           GGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACG                                                  >  SRR4302543.4311691/1‑94 (MQ=60)
                                           GGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACG                                                  <  SRR4302543.7436145/94‑1 (MQ=60)
                                           GGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACG                                                  >  SRR4302543.2811801/1‑94 (MQ=60)
                                            GCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGA                                                 >  SRR4302543.2820260/1‑94 (MQ=60)
                                             CCTGATGCCAAACCCGAAAGTGTTTACTGTAACACCTAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGAC                                                >  SRR4302543.1391892/1‑94 (MQ=60)
                                              CTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACA                                               <  SRR4302543.6310357/94‑1 (MQ=60)
                                              CTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACA                                               >  SRR4302543.3928417/1‑94 (MQ=60)
                                               TGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAA                                              <  SRR4302543.3140967/94‑1 (MQ=60)
                                               TGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAA                                              >  SRR4302543.7963521/1‑94 (MQ=60)
                                                GATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAA                                             >  SRR4302543.7806876/1‑94 (MQ=60)
                                                   GCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAAC                                          <  SRR4302543.7446829/94‑1 (MQ=60)
                                                   GCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAAC                                          <  SRR4302543.4488651/94‑1 (MQ=60)
                                                    CCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACG                                         >  SRR4302543.1998047/1‑94 (MQ=60)
                                                    CCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACG                                         <  SRR4302543.2483483/94‑1 (MQ=60)
                                                    CCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACG                                         <  SRR4302543.2570315/94‑1 (MQ=60)
                                                    CCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACG                                         <  SRR4302543.2570314/94‑1 (MQ=60)
                                                     CAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGG                                        <  SRR4302543.6900849/94‑1 (MQ=60)
                                                      AAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGC                                       >  SRR4302543.6295588/1‑94 (MQ=60)
                                                      AAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGC                                       >  SRR4302543.7479851/1‑94 (MQ=60)
                                                        ACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCAT                                     <  SRR4302543.6130609/94‑1 (MQ=60)
                                                         CCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATC                                    <  SRR4302543.1591285/94‑1 (MQ=60)
                                                         CCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATC                                    <  SRR4302543.6525563/94‑1 (MQ=60)
                                                         CCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATC                                    <  SRR4302543.4456923/94‑1 (MQ=60)
                                                          CCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCA                                   <  SRR4302543.5119628/94‑1 (MQ=60)
                                                           CGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCAT                                  >  SRR4302543.7932514/1‑94 (MQ=60)
                                                           CGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCAT                                  >  SRR4302543.1057738/1‑94 (MQ=60)
                                                           CGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCAT                                  <  SRR4302543.636537/94‑1 (MQ=60)
                                                           CGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCAT                                  <  SRR4302543.4125658/94‑1 (MQ=60)
                                                           CGAAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCAT                                  >  SRR4302543.4519771/1‑94 (MQ=60)
                                                             AAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCC                                >  SRR4302543.4569581/1‑94 (MQ=60)
                                                             AAAGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCC                                >  SRR4302543.913445/1‑94 (MQ=60)
                                                               AGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCAC                              <  SRR4302543.2634056/94‑1 (MQ=60)
                                                               AGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCAC                              <  SRR4302543.1473683/94‑1 (MQ=60)
                                                               AGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCAC                              >  SRR4302543.4219728/1‑94 (MQ=60)
                                                               AGTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCAC                              <  SRR4302543.1515976/94‑1 (MQ=60)
                                                                GTGGGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACA                             <  SRR4302543.7382938/94‑1 (MQ=60)
                                                                   GGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCA                          >  SRR4302543.2136259/1‑94 (MQ=60)
                                                                   GGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCA                          <  SRR4302543.6688466/94‑1 (MQ=60)
                                                                   GGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCA                          >  SRR4302543.1627237/1‑94 (MQ=60)
                                                                   GGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCA                          <  SRR4302543.6688465/94‑1 (MQ=60)
                                                                   GGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCA                          >  SRR4302543.6751030/1‑94 (MQ=60)
                                                                   GGTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCA                          >  SRR4302543.6751031/1‑94 (MQ=60)
                                                                    GTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCAC                         >  SRR4302543.5282418/1‑94 (MQ=60)
                                                                    GTACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCAC                         >  SRR4302543.5723465/1‑94 (MQ=60)
                                                                      ACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCA                       >  SRR4302543.1830732/1‑94 (MQ=60)
                                                                      ACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCA                       <  SRR4302543.1726803/94‑1 (MQ=60)
                                                                      ACTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCA                       >  SRR4302543.7315067/1‑94 (MQ=60)
                                                                       CTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCAT                      >  SRR4302543.2275410/1‑94 (MQ=60)
                                                                       CTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCAT                      >  SRR4302543.1358864/1‑94 (MQ=60)
                                                                       CTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCAT                      >  SRR4302543.6457478/1‑94 (MQ=60)
                                                                       CTGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCAT                      >  SRR4302543.1358863/1‑94 (MQ=60)
                                                                        TGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATC                     <  SRR4302543.4225240/94‑1 (MQ=60)
                                                                        TGTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATC                     >  SRR4302543.6274755/1‑94 (MQ=60)
                                                                        TGTAACAAAGAACGTTGCTGAGGCGGTTAAAAACGCTAACCCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACCCCACCATC                     <  SRR4302543.4250067/94‑1 (MQ=60)
                                                                         GTAACACCGGACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCG                    <  SRR4302543.2486862/94‑1 (MQ=60)
                                                                         GTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCG                    >  SRR4302543.224240/1‑94 (MQ=60)
                                                                         GTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCG                    <  SRR4302543.3170181/94‑1 (MQ=60)
                                                                         GTAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCG                    <  SRR4302543.2486861/94‑1 (MQ=60)
                                                                          TAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGG                   <  SRR4302543.5236488/94‑1 (MQ=60)
                                                                          TAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGG                   >  SRR4302543.6355878/1‑94 (MQ=60)
                                                                          TAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGG                   >  SRR4302543.5577402/1‑94 (MQ=60)
                                                                          TAACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGG                   <  SRR4302543.6086958/94‑1 (MQ=60)
                                                                           AACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGT                  <  SRR4302543.3592322/94‑1 (MQ=60)
                                                                            ACACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTA                 >  SRR4302543.7176544/1‑94 (MQ=60)
                                                                             CACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAA                >  SRR4302543.2245149/1‑94 (MQ=60)
                                                                             CACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAA                <  SRR4302543.387035/94‑1 (MQ=60)
                                                                              ACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAA               <  SRR4302543.4278493/94‑1 (MQ=60)
                                                                              ACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAA               >  SRR4302543.599023/1‑94 (MQ=60)
                                                                              ACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAA               >  SRR4302543.6148022/1‑94 (MQ=60)
                                                                              ACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAA               <  SRR4302543.4846878/94‑1 (MQ=60)
                                                                              ACCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAA               >  SRR4302543.4201113/1‑94 (MQ=60)
                                                                               CCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAG              <  SRR4302543.7935905/94‑1 (MQ=60)
                                                                               CCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAG              <  SRR4302543.3365462/94‑1 (MQ=60)
                                                                               CCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAG              <  SRR4302543.3386597/94‑1 (MQ=60)
                                                                               CCGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAG              >  SRR4302543.5055583/1‑94 (MQ=60)
                                                                                CGAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGT             <  SRR4302543.7269018/94‑1 (MQ=60)
                                                                                 GAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTG            <  SRR4302543.6703246/94‑1 (MQ=60)
                                                                                 GAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTG            <  SRR4302543.849136/94‑1 (MQ=60)
                                                                                 GAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTG            <  SRR4302543.5769477/94‑1 (MQ=60)
                                                                                 GAACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTG            >  SRR4302543.181715/1‑94 (MQ=60)
                                                                                  AACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGG           <  SRR4302543.4770083/94‑1 (MQ=60)
                                                                                  AACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGG           >  SRR4302543.5001874/1‑94 (MQ=60)
                                                                                  AACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGG           <  SRR4302543.269395/94‑1 (MQ=60)
                                                                                  AACGTTGCTCAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACCAAAACGGCATCATCCACACCACCATCGGTAAAGTGG           >  SRR4302543.486092/1‑94 (MQ=60)
                                                                                   ACGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGA          >  SRR4302543.4478915/1‑94 (MQ=60)
                                                                                    CGTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGAC         <  SRR4302543.7614611/94‑1 (MQ=60)
                                                                                     GTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACT        >  SRR4302543.3742520/1‑94 (MQ=60)
                                                                                     GTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACT        >  SRR4302543.3856324/1‑94 (MQ=60)
                                                                                     GTTGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACT        >  SRR4302543.2362860/1‑94 (MQ=60)
                                                                                       TGCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTT      >  SRR4302543.6343063/1‑94 (MQ=60)
                                                                                        GCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTG     <  SRR4302543.2807598/94‑1 (MQ=60)
                                                                                        GCTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTG     >  SRR4302543.7061644/1‑94 (MQ=60)
                                                                                         CTGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGA    <  SRR4302543.4465675/94‑1 (MQ=60)
                                                                                          TGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCGTCCACACCACCATCGGTAAAGTGGACTTTGAC   <  SRR4302543.2968227/94‑1 (MQ=60)
                                                                                          TGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGAC   <  SRR4302543.1328185/94‑1 (MQ=60)
                                                                                          TGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGAC   <  SRR4302543.7034615/94‑1 (MQ=60)
                                                                                          TGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGAC   <  SRR4302543.7034614/94‑1 (MQ=60)
                                                                                          TGAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGAC   >  SRR4302543.2114390/1‑94 (MQ=60)
                                                                                           GAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGACG  <  SRR4302543.5746410/94‑1 (MQ=60)
                                                                                           GAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGACG  >  SRR4302543.4908325/1‑94 (MQ=60)
                                                                                           GAGGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGACG  <  SRR4302543.5836619/94‑1 (MQ=60)
                                                                                             |                                                                                           
AATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGACG  >  NC_000913/4176816‑4177000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑