Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,178,668 A→G intergenic (+165/‑155) rplL → / → rpoB 50S ribosomal subunit protein L7/L12/RNA polymerase beta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,178,6680AG100.0% 1218.3 / NA 386intergenic (+165/‑155)rplL/rpoB50S ribosomal subunit protein L7/L12/RNA polymerase beta subunit
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (196/190);  total (196/190)

Only 100 of 391 total aligned reads displayed.

TGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAT  >  NC_000913/4178578‑4178757
                                                                                          |                                                                                         
tGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCg                                                                                         >  2:1589413/1‑93 (MQ=255)
 gTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGt                                                                                        <  2:1500457/93‑1 (MQ=255)
 gTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGt                                                                                        >  2:2763764/1‑93 (MQ=255)
  tAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTc                                                                                       <  1:1167051/93‑1 (MQ=255)
  tAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTc                                                                                       >  2:5487773/1‑93 (MQ=255)
       cgcCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTc                                                                                  <  2:1844930/93‑1 (MQ=255)
         ccAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCtg                                                                                <  2:1344860/93‑1 (MQ=255)
          cAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCtgt                                                                               <  2:2005159/93‑1 (MQ=255)
            gTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTgtgt                                                                             <  2:5305150/93‑1 (MQ=255)
             tAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTa                                                                            <  2:3864232/93‑1 (MQ=255)
             tAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTa                                                                            >  2:3510534/1‑93 (MQ=255)
             tAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTa                                                                            <  2:2143638/93‑1 (MQ=255)
                cGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAAt                                                                         <  2:6758891/93‑1 (MQ=255)
                 gTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATc                                                                        <  2:6012936/93‑1 (MQ=255)
                 gTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATc                                                                        <  2:4277598/93‑1 (MQ=255)
                  tttCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCg                                                                       >  1:4082070/1‑93 (MQ=255)
                    tCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCa                                                                     >  2:6476659/1‑93 (MQ=255)
                     cacaCTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCaa                                                                    <  1:3150591/93‑1 (MQ=255)
                     cacaCTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCaa                                                                    <  1:2545557/93‑1 (MQ=255)
                      acacTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAAt                                                                   <  2:2553207/93‑1 (MQ=255)
                      acacTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAAt                                                                   >  2:1032164/1‑93 (MQ=255)
                        acTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGa                                                                 >  1:1959644/1‑93 (MQ=255)
                        acTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGa                                                                 <  1:3920965/93‑1 (MQ=255)
                        acTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGa                                                                 <  2:1189962/93‑1 (MQ=255)
                         cTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGaa                                                                >  2:7518250/1‑93 (MQ=255)
                         cTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGaa                                                                >  2:3089980/1‑93 (MQ=255)
                          tgtgtgACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGaaa                                                               <  2:5397583/93‑1 (MQ=255)
                          tGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGaaa                                                               <  1:2451546/93‑1 (MQ=255)
                           gTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAAt                                                              <  1:3608089/93‑1 (MQ=255)
                              tGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGt                                                           <  1:5092374/93‑1 (MQ=255)
                              tGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGt                                                           <  2:3637683/93‑1 (MQ=255)
                               gACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGTCTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGtt                                                          <  1:1025047/93‑1 (MQ=255)
                               gACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGtt                                                          <  2:78654/93‑1 (MQ=255)
                                actactGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGttt                                                         >  2:6192921/1‑93 (MQ=255)
                                 ctactGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTa                                                        >  1:4403718/1‑93 (MQ=255)
                                 ctactGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTa                                                        <  1:3447058/93‑1 (MQ=255)
                                  tactGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTaa                                                       <  2:2291773/93‑1 (MQ=255)
                                   actGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAg                                                      <  1:6335874/93‑1 (MQ=255)
                                     tgctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCg                                                    >  1:7776234/1‑93 (MQ=255)
                                     tgctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCg                                                    >  1:2838055/1‑93 (MQ=255)
                                      gctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGt                                                   >  2:4546965/1‑93 (MQ=255)
                                       ctgTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTg                                                  <  2:1411839/93‑1 (MQ=255)
                                        tgtgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGa                                                 >  2:4399104/1‑93 (MQ=255)
                                        tgtgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGa                                                 >  1:6287334/1‑93 (MQ=255)
                                        tgtgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGa                                                 <  1:5271172/93‑1 (MQ=255)
                                         gtgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGAt                                                >  2:5580867/1‑93 (MQ=255)
                                          tgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATa                                               >  1:6199513/1‑93 (MQ=255)
                                          tgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATa                                               <  1:7564084/93‑1 (MQ=255)
                                          tgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATa                                               <  1:4609386/93‑1 (MQ=255)
                                          tgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATa                                               <  1:2210862/93‑1 (MQ=255)
                                          tgCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATa                                               <  1:5538579/93‑1 (MQ=255)
                                             cTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGCAATGGTTTAAGCGTGATAGCa                                            >  1:3692894/1‑93 (MQ=255)
                                             cTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCa                                            <  1:4774651/93‑1 (MQ=255)
                                              tttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCaa                                           >  2:578515/1‑93 (MQ=255)
                                              tttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCaa                                           >  1:2492414/1‑93 (MQ=255)
                                              tttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCaa                                           >  1:5664782/1‑93 (MQ=255)
                                               ttCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAAc                                          >  1:7348388/1‑93 (MQ=255)
                                                tCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACa                                         <  1:1436418/93‑1 (MQ=255)
                                                  aaTGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAgg                                       >  2:3236227/1‑93 (MQ=255)
                                                   aTGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGc                                      >  1:7447535/1‑93 (MQ=255)
                                                   aTGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGc                                      <  1:5867745/93‑1 (MQ=255)
                                                    tGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCa                                     <  2:7775104/93‑1 (MQ=255)
                                                      cTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCAtt                                   >  1:659535/1‑93 (MQ=255)
                                                       ttGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTg                                  >  1:2311582/1‑93 (MQ=255)
                                                       ttGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTg                                  >  1:4955597/1‑93 (MQ=255)
                                                       ttGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTg                                  >  1:3307240/1‑93 (MQ=255)
                                                        tGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGc                                 <  2:4061015/93‑1 (MQ=255)
                                                         gTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCg                                >  2:1913618/1‑93 (MQ=255)
                                                         gTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCg                                >  2:5139590/1‑93 (MQ=255)
                                                         gTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCg                                >  1:875260/1‑93 (MQ=255)
                                                           ttCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGa                              <  1:3834990/93‑1 (MQ=255)
                                                             cTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGaaa                            <  1:7478648/93‑1 (MQ=255)
                                                             cTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGaaa                            >  1:6467561/1‑93 (MQ=255)
                                                             cTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGaaa                            >  1:2389681/1‑93 (MQ=255)
                                                              tATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAg                           >  1:2354969/1‑93 (MQ=255)
                                                               aTCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAgt                          >  2:1684042/1‑93 (MQ=255)
                                                               aTCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAgt                          <  1:6814861/93‑1 (MQ=255)
                                                               aTCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAgt                          >  2:4894886/1‑93 (MQ=255)
                                                                  gacgacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGtt                       <  2:4756055/93‑1 (MQ=255)
                                                                   acgacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTCAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTc                      <  2:7032957/93‑1 (MQ=255)
                                                                   acgacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTc                      <  1:6996122/93‑1 (MQ=255)
                                                                    cgacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTcc                     <  1:4886997/93‑1 (MQ=255)
                                                                     gacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCa                    >  1:966911/1‑93 (MQ=255)
                                                                     gacTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCa                    <  1:4018671/93‑1 (MQ=255)
                                                                      acTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAt                   <  1:1545011/93‑1 (MQ=255)
                                                                        ttAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAttt                 <  2:6829384/93‑1 (MQ=255)
                                                                         tAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAtttt                >  2:2400540/1‑93 (MQ=255)
                                                                         tAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAtttt                >  1:162821/1‑93 (MQ=255)
                                                                           atatACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTcg              >  1:5346350/1‑92 (MQ=255)
                                                                            tataCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCg             >  2:2598904/1‑93 (MQ=255)
                                                                            tataCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCg             <  2:7293740/93‑1 (MQ=255)
                                                                            tataCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCg             >  2:63454/1‑93 (MQ=255)
                                                                              taCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGt           <  2:4629455/93‑1 (MQ=255)
                                                                                cTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTca         >  1:7679380/1‑93 (MQ=255)
                                                                                  gCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGTGGAAAGTGTTCCATTTTCCGGTcaac       <  2:822227/93‑1 (MQ=255)
                                                                                    gACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTcaacaa     >  2:7577758/1‑93 (MQ=255)
                                                                                     aCAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACaaa    >  1:3007037/1‑93 (MQ=255)
                                                                                      cAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACaaaa   <  1:5728337/93‑1 (MQ=255)
                                                                                       aGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAt  <  2:6112194/93‑1 (MQ=255)
                                                                                       aGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAt  <  2:2095846/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAT  >  NC_000913/4178578‑4178757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 210 total aligned reads displayed.
CGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAGTG  >  NC_000913/4178575‑4178761
                                                                                             |                                                                                             
CGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGG                                                                                               <  SRR4302543.1717022/94‑1 (MQ=60)
CGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGG                                                                                               >  SRR4302543.5168875/1‑94 (MQ=60)
 GCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGC                                                                                              <  SRR4302543.7022070/94‑1 (MQ=60)
  CTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCG                                                                                             <  SRR4302543.1165343/94‑1 (MQ=60)
  CTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCG                                                                                             >  SRR4302543.6306659/1‑94 (MQ=60)
  CTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCG                                                                                             >  SRR4302543.1630056/1‑94 (MQ=60)
  CTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCG                                                                                             >  SRR4302543.4959009/1‑94 (MQ=60)
   TGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGT                                                                                            <  SRR4302543.5768303/94‑1 (MQ=60)
   TGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGT                                                                                            <  SRR4302543.7423076/94‑1 (MQ=60)
     TAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCC                                                                                          <  SRR4302543.2362956/94‑1 (MQ=60)
     TAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCC                                                                                          <  SRR4302543.3691393/94‑1 (MQ=60)
     TAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCC                                                                                          <  SRR4302543.1177655/94‑1 (MQ=60)
     TAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCC                                                                                          <  SRR4302543.6325152/94‑1 (MQ=60)
     TAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCC                                                                                          >  SRR4302543.6486642/1‑94 (MQ=60)
       AGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGT                                                                                        <  SRR4302543.7708606/94‑1 (MQ=60)
          CGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCT                                                                                     <  SRR4302543.1170768/94‑1 (MQ=60)
            CCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGT                                                                                   >  SRR4302543.5901853/1‑94 (MQ=60)
              AGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGT                                                                                 >  SRR4302543.6046457/1‑94 (MQ=60)
              AGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGT                                                                                 >  SRR4302543.3428975/1‑94 (MQ=60)
              AGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGT                                                                                 <  SRR4302543.2570486/94‑1 (MQ=60)
              AGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGT                                                                                 >  SRR4302543.4085326/1‑94 (MQ=60)
               GTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTA                                                                                >  SRR4302543.2992887/1‑94 (MQ=60)
               GTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTA                                                                                >  SRR4302543.4850451/1‑94 (MQ=60)
                 AGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAA                                                                              >  SRR4302543.5504753/1‑94 (MQ=60)
                  GCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAAT                                                                             <  SRR4302543.5547725/94‑1 (MQ=60)
                  GCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAAT                                                                             <  SRR4302543.7902586/94‑1 (MQ=60)
                   CGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATC                                                                            >  SRR4302543.7484404/1‑94 (MQ=60)
                   CGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATC                                                                            <  SRR4302543.1240372/94‑1 (MQ=60)
                    GTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCG                                                                           >  SRR4302543.4118666/1‑94 (MQ=60)
                    GTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCG                                                                           <  SRR4302543.2406944/94‑1 (MQ=60)
                    GTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCG                                                                           >  SRR4302543.7493228/1‑94 (MQ=60)
                     TTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGC                                                                          >  SRR4302543.4242088/1‑94 (MQ=60)
                     TTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGC                                                                          <  SRR4302543.4022236/94‑1 (MQ=60)
                      TTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCA                                                                         >  SRR4302543.7622925/1‑94 (MQ=60)
                      TTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCA                                                                         >  SRR4302543.4739315/1‑94 (MQ=60)
                      TTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCA                                                                         <  SRR4302543.3677061/94‑1 (MQ=60)
                        CACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAAT                                                                       >  SRR4302543.7545336/1‑94 (MQ=60)
                        CACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAAT                                                                       <  SRR4302543.3178933/94‑1 (MQ=60)
                        CACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAAT                                                                       <  SRR4302543.2568776/94‑1 (MQ=60)
                        CACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAAT                                                                       >  SRR4302543.2486003/1‑94 (MQ=60)
                        CACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAAT                                                                       <  SRR4302543.1497565/94‑1 (MQ=60)
                        CACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGAAAATCGAAAT                                                                       >  SRR4302543.2486002/1‑94 (MQ=60)
                         ACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATG                                                                      >  SRR4302543.2546587/1‑94 (MQ=60)
                          CACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTCATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGA                                                                     >  SRR4302543.216869/1‑94 (MQ=60)
                          CACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGA                                                                     >  SRR4302543.4757530/1‑94 (MQ=60)
                          CACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGA                                                                     <  SRR4302543.6651459/94‑1 (MQ=60)
                          CACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGA                                                                     >  SRR4302543.1977221/1‑94 (MQ=60)
                           ACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAA                                                                    <  SRR4302543.3955569/94‑1 (MQ=60)
                           ACTGTTTGACTACCGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAA                                                                    <  SRR4302543.5815776/94‑1 (MQ=60)
                             TGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAAT                                                                  <  SRR4302543.7213929/94‑1 (MQ=60)
                             TGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAAT                                                                  <  SRR4302543.2473662/94‑1 (MQ=60)
                              GTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATG                                                                 <  SRR4302543.3639926/94‑1 (MQ=60)
                               TTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGG                                                                >  SRR4302543.1615159/1‑94 (MQ=60)
                                 TGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTT                                                              >  SRR4302543.4814038/1‑94 (MQ=60)
                                 TGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTT                                                              <  SRR4302543.5138511/94‑1 (MQ=60)
                                 TGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTT                                                              >  SRR4302543.7564335/1‑94 (MQ=60)
                                 TGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTT                                                              <  SRR4302543.3658368/94‑1 (MQ=60)
                                  GACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGTCTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTT                                                             <  SRR4302543.1034124/94‑1 (MQ=60)
                                  GACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTT                                                             >  SRR4302543.4300377/1‑94 (MQ=60)
                                  GACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTT                                                             >  SRR4302543.2717478/1‑94 (MQ=60)
                                  GACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTT                                                             >  SRR4302543.6519011/1‑94 (MQ=60)
                                  GACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTT                                                             <  SRR4302543.955850/94‑1 (MQ=60)
                                   ACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTA                                                            >  SRR4302543.4443639/1‑94 (MQ=60)
                                    CTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAA                                                           >  SRR4302543.538089/1‑94 (MQ=60)
                                    CTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAA                                                           >  SRR4302543.7060531/1‑94 (MQ=60)
                                    CTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAA                                                           >  SRR4302543.1343034/1‑94 (MQ=60)
                                    CTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAA                                                           <  SRR4302543.3477925/94‑1 (MQ=60)
                                     TACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAG                                                          <  SRR4302543.4240114/94‑1 (MQ=60)
                                     TACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAG                                                          <  SRR4302543.7760283/94‑1 (MQ=60)
                                     TACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAG                                                          <  SRR4302543.978941/94‑1 (MQ=60)
                                     TACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAG                                                          >  SRR4302543.3364679/1‑94 (MQ=60)
                                     TACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGAGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAG                                                          <  SRR4302543.849775/94‑1 (MQ=60)
                                      TCTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGC                                                         <  SRR4302543.6395456/94‑1 (MQ=60)
                                      ACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGC                                                         >  SRR4302543.2273845/1‑94 (MQ=60)
                                      ACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGC                                                         <  SRR4302543.350128/94‑1 (MQ=60)
                                      ACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGC                                                         <  SRR4302543.6395457/94‑1 (MQ=60)
                                       CTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCG                                                        >  SRR4302543.2864002/1‑94 (MQ=60)
                                       CTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCG                                                        >  SRR4302543.7849570/1‑94 (MQ=60)
                                        TGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGT                                                       <  SRR4302543.5339777/94‑1 (MQ=60)
                                        TGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGT                                                       <  SRR4302543.6884097/94‑1 (MQ=60)
                                         GCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTG                                                      <  SRR4302543.3617682/94‑1 (MQ=60)
                                          CTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGA                                                     >  SRR4302543.6346553/1‑94 (MQ=60)
                                          CTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGA                                                     >  SRR4302543.2359922/1‑94 (MQ=60)
                                           TGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGAT                                                    <  SRR4302543.5318726/94‑1 (MQ=60)
                                           TGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGAT                                                    >  SRR4302543.977849/1‑94 (MQ=60)
                                           TGTGCCTTGCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGAT                                                    <  SRR4302543.7669087/94‑1 (MQ=60)
                                            GTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATA                                                   <  SRR4302543.246571/94‑1 (MQ=60)
                                            GTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATA                                                   >  SRR4302543.6258069/1‑94 (MQ=60)
                                             TGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAG                                                  <  SRR4302543.7636072/94‑1 (MQ=60)
                                             TGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAG                                                  <  SRR4302543.7375993/94‑1 (MQ=60)
                                             TGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAG                                                  <  SRR4302543.7295508/94‑1 (MQ=60)
                                             TGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAG                                                  <  SRR4302543.5588937/94‑1 (MQ=60)
                                             TGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAG                                                  >  SRR4302543.6315241/1‑94 (MQ=60)
                                             TGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAG                                                  <  SRR4302543.2230782/94‑1 (MQ=60)
                                             TGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAG                                                  <  SRR4302543.7636073/94‑1 (MQ=60)
                                             TGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAG                                                  <  SRR4302543.6460721/94‑1 (MQ=60)
                                             TGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAG                                                  <  SRR4302543.1440836/94‑1 (MQ=60)
                                              GCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGC                                                 <  SRR4302543.1850798/94‑1 (MQ=60)
                                               CCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGCAATGGTTTAAGCGTGATAGCA                                                >  SRR4302543.3725352/1‑94 (MQ=60)
                                               CCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCA                                                >  SRR4302543.5667490/1‑94 (MQ=60)
                                               CCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCA                                                <  SRR4302543.1138503/94‑1 (MQ=60)
                                               CCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCA                                                >  SRR4302543.3225051/1‑94 (MQ=60)
                                                CTTTCAATGCTTGTTTCTATCGACGACTTAATATGCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAA                                               <  SRR4302543.4818293/94‑1 (MQ=60)
                                                CTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAA                                               >  SRR4302543.2515011/1‑94 (MQ=60)
                                                CTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAA                                               >  SRR4302543.5716459/1‑94 (MQ=60)
                                                CTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAA                                               <  SRR4302543.4818291/94‑1 (MQ=60)
                                                 TTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAAC                                              >  SRR4302543.7419074/1‑94 (MQ=60)
                                                 TTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAAC                                              >  SRR4302543.2329347/1‑94 (MQ=60)
                                                  TTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACA                                             <  SRR4302543.821956/94‑1 (MQ=60)
                                                  TTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACA                                             <  SRR4302543.1622675/94‑1 (MQ=60)
                                                   TCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAG                                            <  SRR4302543.1449403/94‑1 (MQ=60)
                                                   TCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAG                                            <  SRR4302543.4049783/94‑1 (MQ=60)
                                                   TCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAG                                            <  SRR4302543.2476301/94‑1 (MQ=60)
                                                   TCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAG                                            <  SRR4302543.3174631/94‑1 (MQ=60)
                                                    CAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGG                                           >  SRR4302543.3584912/1‑94 (MQ=60)
                                                    CAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGG                                           >  SRR4302543.5114182/1‑94 (MQ=60)
                                                     AATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGC                                          >  SRR4302543.7518901/1‑94 (MQ=60)
                                                     AATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGC                                          >  SRR4302543.3270581/1‑94 (MQ=60)
                                                     AATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGC                                          <  SRR4302543.2526666/94‑1 (MQ=60)
                                                     AATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGC                                          >  SRR4302543.6749336/1‑94 (MQ=60)
                                                      ATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCA                                         >  SRR4302543.637522/1‑94 (MQ=60)
                                                      ATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCA                                         >  SRR4302543.4962104/1‑94 (MQ=60)
                                                      ATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCA                                         >  SRR4302543.5765505/1‑94 (MQ=60)
                                                       TGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCAT                                        <  SRR4302543.2274169/94‑1 (MQ=60)
                                                       TGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCAT                                        >  SRR4302543.4916437/1‑94 (MQ=60)
                                                        TCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATT                                       <  SRR4302543.2406029/94‑1 (MQ=60)
                                                        GCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATT                                       >  SRR4302543.665594/1‑94 (MQ=60)
                                                        GCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATT                                       <  SRR4302543.3960397/94‑1 (MQ=60)
                                                        GCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATT                                       <  SRR4302543.4525929/94‑1 (MQ=60)
                                                        GCTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCAGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATT                                       <  SRR4302543.7791986/94‑1 (MQ=60)
                                                         CTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTG                                      <  SRR4302543.5686806/94‑1 (MQ=60)
                                                         CTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTG                                      >  SRR4302543.5000722/1‑94 (MQ=60)
                                                         CTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTG                                      >  SRR4302543.3337087/1‑94 (MQ=60)
                                                         CTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTG                                      >  SRR4302543.3734333/1‑94 (MQ=60)
                                                         CTTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTG                                      >  SRR4302543.2332616/1‑94 (MQ=60)
                                                          TTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGC                                     <  SRR4302543.3235794/94‑1 (MQ=60)
                                                          TTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGC                                     <  SRR4302543.5860769/94‑1 (MQ=60)
                                                          TTGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGC                                     <  SRR4302543.1824324/94‑1 (MQ=60)
                                                           TGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCG                                    >  SRR4302543.883049/1‑94 (MQ=60)
                                                           TGTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCG                                    >  SRR4302543.3873964/1‑94 (MQ=60)
                                                            GTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGG                                   <  SRR4302543.916907/94‑1 (MQ=60)
                                                            GTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGG                                   >  SRR4302543.5960801/1‑94 (MQ=60)
                                                            GTTTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGG                                   <  SRR4302543.2767595/94‑1 (MQ=60)
                                                              TTCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAA                                 <  SRR4302543.3868830/94‑1 (MQ=60)
                                                               TCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAA                                >  SRR4302543.2411310/1‑94 (MQ=60)
                                                               TCTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAA                                >  SRR4302543.6528494/1‑94 (MQ=60)
                                                                CTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAG                               <  SRR4302543.7550240/94‑1 (MQ=60)
                                                                CTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAG                               >  SRR4302543.2376327/1‑94 (MQ=60)
                                                                CTATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAG                               <  SRR4302543.7550241/94‑1 (MQ=60)
                                                                 TATCGACGACTTAATATGCTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGT                              <  SRR4302543.4114624/94‑1 (MQ=60)
                                                                  ATCGACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTG                             <  SRR4302543.6879197/94‑1 (MQ=60)
                                                                  ATCGACGACGTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTG                             <  SRR4302543.4579987/94‑1 (MQ=60)
                                                                     GACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTC                          <  SRR4302543.3774865/94‑1 (MQ=60)
                                                                     GACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTC                          >  SRR4302543.6548191/1‑94 (MQ=60)
                                                                      ACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCC                         >  SRR4302543.1556240/1‑94 (MQ=60)
                                                                      ACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCC                         <  SRR4302543.4586198/94‑1 (MQ=60)
                                                                      ACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCC                         <  SRR4302543.5066304/94‑1 (MQ=60)
                                                                      ACGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCC                         <  SRR4302543.7062146/94‑1 (MQ=60)
                                                                       CGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGTCATTGCGGAAAGTGTTCCA                        <  SRR4302543.4931541/94‑1 (MQ=60)
                                                                       CGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCA                        >  SRR4302543.2018452/1‑94 (MQ=60)
                                                                       CGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCA                        <  SRR4302543.4931540/94‑1 (MQ=60)
                                                                       CGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCA                        >  SRR4302543.975404/1‑94 (MQ=60)
                                                                       CGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCA                        <  SRR4302543.5701444/94‑1 (MQ=60)
                                                                       CGACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCA                        <  SRR4302543.903276/94‑1 (MQ=60)
                                                                        GACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCAT                       <  SRR4302543.4054560/94‑1 (MQ=60)
                                                                         ACTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATT                      <  SRR4302543.1558843/94‑1 (MQ=60)
                                                                          CTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTT                     >  SRR4302543.7797736/1‑94 (MQ=60)
                                                                          CTTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTT                     <  SRR4302543.5017880/94‑1 (MQ=60)
                                                                           TTAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTT                    >  SRR4302543.164223/1‑94 (MQ=60)
                                                                           TTAATATACTGCGACAGGGCGTCCGTTCCGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTT                    <  SRR4302543.6818452/94‑1 (MQ=60)
                                                                            TAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTC                   <  SRR4302543.236271/94‑1 (MQ=60)
                                                                            TAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTC                   >  SRR4302543.2407922/1‑94 (MQ=60)
                                                                            TAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTC                   <  SRR4302543.3889082/94‑1 (MQ=60)
                                                                            TAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTC                   <  SRR4302543.3889081/94‑1 (MQ=60)
                                                                            TAATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTC                   <  SRR4302543.1514786/94‑1 (MQ=60)
                                                                             AATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCG                  >  SRR4302543.5394727/1‑94 (MQ=60)
                                                                             AATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCC                  <  SRR4302543.2952846/94‑1 (MQ=60)
                                                                             AATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCC                  <  SRR4302543.7021973/94‑1 (MQ=60)
                                                                             AATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCC                  >  SRR4302543.6379198/1‑94 (MQ=60)
                                                                              ATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCG                 <  SRR4302543.2988251/94‑1 (MQ=60)
                                                                              ATATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCG                 >  SRR4302543.305431/1‑94 (MQ=60)
                                                                                ATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTTCATTTTCCGGT               >  SRR4302543.6135171/1‑94 (MQ=60)
                                                                                ATACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGT               <  SRR4302543.5225346/94‑1 (MQ=60)
                                                                                 TACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTC              <  SRR4302543.5548360/94‑1 (MQ=60)
                                                                                  ACTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCA             >  SRR4302543.7752124/1‑94 (MQ=60)
                                                                                   CTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAA            >  SRR4302543.3411750/1‑94 (MQ=60)
                                                                                   CTGCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAA            >  SRR4302543.2040649/1‑94 (MQ=60)
                                                                                     GCGACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACA          >  SRR4302543.6530498/1‑94 (MQ=60)
                                                                                       GACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAA        >  SRR4302543.3034277/1‑94 (MQ=60)
                                                                                        ACAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAA       >  SRR4302543.5150462/1‑94 (MQ=60)
                                                                                         CAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAT      <  SRR4302543.5351237/94‑1 (MQ=60)
                                                                                         CAGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAAT      <  SRR4302543.5780604/94‑1 (MQ=60)
                                                                                          AGGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATA     >  SRR4302543.1805985/1‑94 (MQ=60)
                                                                                           GGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAG    <  SRR4302543.2894388/94‑1 (MQ=60)
                                                                                           GGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAG    >  SRR4302543.2462853/1‑94 (MQ=60)
                                                                                           GGGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAG    >  SRR4302543.5630778/1‑94 (MQ=60)
                                                                                            GGCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAGT   <  SRR4302543.3873975/94‑1 (MQ=60)
                                                                                             GCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAGTG  <  SRR4302543.1112999/94‑1 (MQ=60)
                                                                                             GCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAGTG  <  SRR4302543.5253041/94‑1 (MQ=60)
                                                                                             GCGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAGTG  >  SRR4302543.1595841/1‑94 (MQ=60)
                                                                                             |                                                                                             
CGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTGTTCCATTTTCCGGTCAACAAAATAGTG  >  NC_000913/4178575‑4178761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑