Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,219,434	A→G	A211A (GCT→GCC)	arp ←	Arp

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,219,434	0	A	G	99.7%	1193.9 / ‑5.2	376	A211A (GCT→GCC)	arp	Arp
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (183/192); total (184/192)
Fisher's exact test for biased strand distribution p-value = 4.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01

Only 100 of 405 total aligned reads displayed.

CACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC  >  NC_000913/4219344‑4219523

caccaGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAggcggc                                                                                         <  2:1437598/93‑1 (MQ=255)

   caGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaac                                                                                      <  1:7332235/93‑1 (MQ=255)

     gTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgc                                                                                    >  2:1188882/1‑93 (MQ=255)

     gTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAgcaacgc                                                                                    >  1:128743/1‑93 (MQ=255)

      tAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgca                                                                                   >  2:3301921/1‑93 (MQ=255)

         tatGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGcaacgcaacg                                                                                >  1:7765390/1‑93 (MQ=255)

             gCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGcccc                                                                            <  2:4501084/93‑1 (MQ=255)

              cTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCt                                                                           <  1:5617834/93‑1 (MQ=255)

               tGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTc                                                                          >  1:1203593/1‑93 (MQ=255)

               tGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTc                                                                          >  1:6397649/1‑93 (MQ=255)

                gCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCa                                                                         >  2:6415926/1‑93 (MQ=255)

                gCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCa                                                                         >  2:6247732/1‑93 (MQ=255)

                  cATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAgg                                                                       <  2:896613/93‑1 (MQ=255)

                  cATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAgg                                                                       <  1:517044/93‑1 (MQ=255)

                   aTAACACTGATGCCATTTGCTTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCCACGCCCCTCAGGa                                                                      >  1:1009969/1‑93 (MQ=255)

                   aTAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGa                                                                      >  2:5449929/1‑93 (MQ=255)

                   aTAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGa                                                                      <  2:7579887/93‑1 (MQ=255)

                   aTAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGa                                                                      <  1:2015476/93‑1 (MQ=255)

                    tAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAc                                                                     <  2:3062315/93‑1 (MQ=255)

                       cacTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGc                                                                  <  1:7219430/93‑1 (MQ=255)

                        acTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCt                                                                 <  1:3298045/93‑1 (MQ=255)

                        acTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCt                                                                 <  2:3820670/93‑1 (MQ=255)

                         cTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTg                                                                <  1:110141/93‑1 (MQ=255)

                         cTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTg                                                                >  1:2468295/1‑93 (MQ=255)

                           gATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGa                                                              >  1:6601862/1‑93 (MQ=255)

                           gATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGa                                                              <  1:577074/93‑1 (MQ=255)

                           gATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGa                                                              >  1:4860669/1‑93 (MQ=255)

                             tGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGaaa                                                            <  1:4269435/93‑1 (MQ=255)

                                cATTTGATTCCATCTTTTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACAGCTGGAAACCa                                                         >  1:4063245/1‑93 (MQ=255)

                                 aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa                                                        <  2:742738/93‑1 (MQ=255)

                                 aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa                                                        <  2:4005453/93‑1 (MQ=255)

                                 aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa                                                        <  2:6744577/93‑1 (MQ=255)

                                  tttGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAc                                                       <  1:6555777/93‑1 (MQ=255)

                                  tttGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAc                                                       <  1:6894504/93‑1 (MQ=255)

                                  tttGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAc                                                       >  1:3858651/1‑93 (MQ=255)

                                  tttGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAc                                                       <  1:2381591/93‑1 (MQ=255)

                                  tttGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAc                                                       <  2:7683124/93‑1 (MQ=255)

                                     gATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGcc                                                    >  2:1545704/1‑93 (MQ=255)

                                     gATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGcc                                                    >  2:5589749/1‑93 (MQ=255)

                                      aTTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCa                                                   >  2:4539908/1‑93 (MQ=255)

                                      aTTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCa                                                   <  1:1022323/93‑1 (MQ=255)

                                      aTTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCa                                                   >  1:1959540/1‑93 (MQ=255)

                                        tCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCaaa                                                 <  2:4951679/93‑1 (MQ=255)

                                        tCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCaaa                                                 <  2:6825429/93‑1 (MQ=255)

                                        tCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCaaa                                                 <  2:1931066/93‑1 (MQ=255)

                                         ccATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAg                                                <  1:3505295/93‑1 (MQ=255)

                                          cATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGt                                               >  2:5013852/1‑93 (MQ=255)

                                          cATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGt                                               >  1:2801454/1‑93 (MQ=255)

                                           aTCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTc                                              <  1:5841078/93‑1 (MQ=255)

                                            tCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCCCCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCt                                             <  2:7226308/93‑1 (MQ=255)

                                            tCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCt                                             <  2:3743313/93‑1 (MQ=255)

                                            gcTTGTCAAAATATGCTTTCATAACTAGCTCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCt                                             <  1:5402630/92‑1 (MQ=255)

                                              ttGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTgg                                           >  2:6565390/1‑93 (MQ=255)

                                                gTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGtt                                         <  1:7410188/93‑1 (MQ=255)

                                                gTCAAAATATGCTATAATATCTAGCCCGTAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCAGGAAGCCAACGCCAAAGTCTGGtt                                         <  1:7025921/93‑1 (MQ=255)

                                                 tCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttt                                        <  1:5317487/93‑1 (MQ=255)

                                                 tCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttt                                        >  2:281300/1‑93 (MQ=255)

                                                  cAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGtttt                                       <  1:938873/93‑1 (MQ=255)

                                                   aaaaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttttt                                      <  2:3514045/93‑1 (MQ=255)

                                                      atatGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCa                                   >  2:7820172/1‑93 (MQ=255)

                                                       tatGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAt                                  <  2:2245224/93‑1 (MQ=255)

                                                        atGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtt                                 <  1:4675723/93‑1 (MQ=255)

                                                         tGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAttt                                <  2:1666199/93‑1 (MQ=255)

                                                           cTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAttttt                              >  1:7722382/1‑93 (MQ=255)

                                                            tttCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtttttt                             >  1:6774149/1‑93 (MQ=255)

                                                             ttCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttg                            <  1:4180435/93‑1 (MQ=255)

                                                              tCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgt                           >  1:3975635/1‑93 (MQ=255)

                                                              tCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgt                           <  1:2616859/93‑1 (MQ=255)

                                                              tCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgt                           >  1:3777721/1‑93 (MQ=255)

                                                              tCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgt                           <  2:4712473/93‑1 (MQ=255)

                                                                aTAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgttg                         <  1:5011909/93‑1 (MQ=255)

                                                                 tAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGa                        <  1:7625086/93‑1 (MQ=255)

                                                                 tAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGa                        <  1:3621384/93‑1 (MQ=255)

                                                                 tAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGa                        >  2:5756696/1‑93 (MQ=255)

                                                                  aaCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGaa                       <  2:3181284/93‑1 (MQ=255)

                                                                  aaCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGaa                       <  2:7378253/93‑1 (MQ=255)

                                                                  aaCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGaa                       <  2:6318289/93‑1 (MQ=255)

                                                                  aaCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGaa                       <  2:5313722/93‑1 (MQ=255)

                                                                   aCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAg                      >  1:1365311/1‑93 (MQ=255)

                                                                   aCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAg                      >  1:4361204/1‑93 (MQ=255)

                                                                   aCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAg                      <  2:5986696/93‑1 (MQ=255)

                                                                   aCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAg                      >  2:1570971/1‑93 (MQ=255)

                                                                    cTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGt                     >  2:4290297/1‑93 (MQ=255)

                                                                     tAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTg                    >  1:5932266/1‑93 (MQ=255)

                                                                      aGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGc                   >  2:3475772/1‑93 (MQ=255)

                                                                       gCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCg                  <  1:2098676/93‑1 (MQ=255)

                                                                       gCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCg                  <  2:2763592/93‑1 (MQ=255)

                                                                       gCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCg                  >  2:704250/1‑93 (MQ=255)

                                                                          cGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTga               <  1:859267/93‑1 (MQ=255)

                                                                            aaaTCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTgaga             >  2:2037625/1‑93 (MQ=255)

                                                                                cACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAtt         <  1:7513876/93‑1 (MQ=255)

                                                                                cACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAtt         <  1:1701431/93‑1 (MQ=255)

                                                                                 aCCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAttt        >  2:2586662/1‑93 (MQ=255)

                                                                                  ccGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAtttt       <  1:3082979/93‑1 (MQ=255)

                                                                                   cGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAttttt      >  2:4123619/1‑93 (MQ=255)

                                                                                    gcaggcggCAACGCAGCGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTc     <  2:2938604/93‑1 (MQ=255)

                                                                                    gcaggcggCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTc     >  1:5100576/1‑93 (MQ=255)

                                                                                    gcaggcggCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTc     >  2:4388994/1‑93 (MQ=255)

                                                                                    gcaggcggCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTc     >  1:1560677/1‑93 (MQ=255)

                                                                                       ggcggcAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGc  <  2:6097188/93‑1 (MQ=255)

CACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC  >  NC_000913/4219344‑4219523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 217 total aligned reads displayed.

ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGAAG  >  NC_000913/4219341‑4219528

ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCG                                                                                                >  SRR4302543.6627628/1‑94 (MQ=60)

ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCG                                                                                                >  SRR4302543.6602684/1‑94 (MQ=60)

 TCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGG                                                                                               >  SRR4302543.1089290/1‑94 (MQ=60)

  CCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGC                                                                                              >  SRR4302543.3970853/1‑94 (MQ=60)

  CCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGC                                                                                              >  SRR4302543.482681/1‑94 (MQ=60)

   CACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCA                                                                                             >  SRR4302543.4620249/1‑94 (MQ=60)

     CCAGTAATATGGCTGCCATAACACTGATGCCATTTGGTTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAAC                                                                                           >  SRR4302543.1411113/1‑94 (MQ=60)

     CCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAAC                                                                                           <  SRR4302543.1089074/94‑1 (MQ=60)

     CCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAAC                                                                                           >  SRR4302543.5112223/1‑94 (MQ=60)

      CAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACG                                                                                          <  SRR4302543.7402794/94‑1 (MQ=60)

       AGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGC                                                                                         >  SRR4302543.5980350/1‑94 (MQ=60)

       AGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGC                                                                                         >  SRR4302543.129896/1‑94 (MQ=60)

        GTAATATGGCCGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCA                                                                                        >  SRR4302543.6826752/1‑94 (MQ=60)

          atgATGGCTACCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCGCCGCAGGCGGCAACGCAAC                                                                                      <  SRR4302543.3681116/91‑1 (MQ=60)

          AATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAAC                                                                                      <  SRR4302543.7646238/94‑1 (MQ=60)

          AATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAAC                                                                                      <  SRR4302543.1234543/94‑1 (MQ=60)

           ATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACG                                                                                     <  SRR4302543.2083152/94‑1 (MQ=60)

           ATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACG                                                                                     >  SRR4302543.5916261/1‑94 (MQ=60)

           ATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACG                                                                                     >  SRR4302543.7838667/1‑94 (MQ=60)

           ATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACG                                                                                     >  SRR4302543.497661/1‑94 (MQ=60)

             ATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCC                                                                                   <  SRR4302543.4392632/94‑1 (MQ=60)

             ATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCC                                                                                   >  SRR4302543.5430489/1‑94 (MQ=60)

             ATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCC                                                                                   >  SRR4302543.2664829/1‑94 (MQ=60)

             ATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCC                                                                                   >  SRR4302543.516297/1‑94 (MQ=60)

               GGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCC                                                                                 <  SRR4302543.7582447/94‑1 (MQ=60)

               GGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCC                                                                                 >  SRR4302543.2020154/1‑94 (MQ=60)

                GCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCT                                                                                <  SRR4302543.354558/94‑1 (MQ=60)

                GCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCT                                                                                >  SRR4302543.2905899/1‑94 (MQ=60)

                GCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCC                                                                                >  SRR4302543.1601669/1‑94 (MQ=60)

                 CTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTC                                                                               >  SRR4302543.1027158/1‑94 (MQ=60)

                 CTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTC                                                                               <  SRR4302543.5669028/94‑1 (MQ=60)

                 CTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTC                                                                               >  SRR4302543.6457874/1‑94 (MQ=60)

                 CTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTC                                                                               >  SRR4302543.1214431/1‑94 (MQ=60)

                  TGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCA                                                                              <  SRR4302543.2823279/94‑1 (MQ=60)

                  TGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCA                                                                              <  SRR4302543.4250863/94‑1 (MQ=60)

                  TGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCA                                                                              <  SRR4302543.4020450/94‑1 (MQ=60)

                  TGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCA                                                                              <  SRR4302543.3556873/94‑1 (MQ=60)

                   GCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAG                                                                             <  SRR4302543.1686210/94‑1 (MQ=60)

                   GCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAG                                                                             >  SRR4302543.725004/1‑94 (MQ=60)

                    CCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGG                                                                            <  SRR4302543.5791674/94‑1 (MQ=60)

                    CCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGG                                                                            >  SRR4302543.8916/1‑94 (MQ=60)

                    CCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGG                                                                            <  SRR4302543.3893885/94‑1 (MQ=60)

                    CCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGG                                                                            <  SRR4302543.3862251/94‑1 (MQ=60)

                    CCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGG                                                                            >  SRR4302543.5184834/1‑94 (MQ=60)

                    CCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAAAGCAACGCCCCTAAGG                                                                            >  SRR4302543.5184833/1‑94 (MQ=60)

                     CATAACACTGATGCCATTTGCTTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCCACGCCCCTCAGGA                                                                           >  SRR4302543.1018903/1‑94 (MQ=60)

                     CATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGA                                                                           <  SRR4302543.521843/94‑1 (MQ=60)

                     CATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGA                                                                           >  SRR4302543.5353592/1‑94 (MQ=60)

                     CATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGA                                                                           >  SRR4302543.1018904/1‑94 (MQ=60)

                     CATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGA                                                                           >  SRR4302543.6441302/1‑94 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                          >  SRR4302543.4750955/1‑94 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                          <  SRR4302543.3835650/94‑1 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                          >  SRR4302543.3709535/1‑94 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                          <  SRR4302543.7500412/94‑1 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                          >  SRR4302543.6772328/1‑94 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                          <  SRR4302543.7161968/94‑1 (MQ=60)

                      ATAACACTGATGCCATTGTATTCCATCGTCTCAAAATATGCGTTCATAACTAGCCCGAAGTCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                          <  SRR4302543.3835651/94‑1 (MQ=60)

                       TAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACG                                                                         <  SRR4302543.7514462/94‑1 (MQ=60)

                       TAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACG                                                                         >  SRR4302543.2438502/1‑94 (MQ=60)

                         ACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGC                                                                       >  SRR4302543.6088160/1‑94 (MQ=60)

                         ACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGC                                                                       >  SRR4302543.706114/1‑94 (MQ=60)

                         ACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGC                                                                       >  SRR4302543.6551508/1‑94 (MQ=60)

                         ACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGC                                                                       >  SRR4302543.3505656/1‑94 (MQ=60)

                         ACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGC                                                                       >  SRR4302543.4226877/1‑94 (MQ=60)

                          CACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCCACGCCCCTCAGGACGGCT                                                                      >  SRR4302543.7374610/1‑94 (MQ=60)

                          CACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCT                                                                      <  SRR4302543.7289404/94‑1 (MQ=60)

                          CACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCT                                                                      >  SRR4302543.6644929/1‑94 (MQ=60)

                          CACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCT                                                                      <  SRR4302543.2071677/94‑1 (MQ=60)

                           ACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTG                                                                     <  SRR4302543.3327802/94‑1 (MQ=60)

                           ACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTG                                                                     <  SRR4302543.1686678/94‑1 (MQ=60)

                           ACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTG                                                                     >  SRR4302543.2490572/1‑94 (MQ=60)

                            CTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGG                                                                    <  SRR4302543.111145/94‑1 (MQ=60)

                             TGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGA                                                                   >  SRR4302543.7833149/1‑94 (MQ=60)

                             TGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGA                                                                   <  SRR4302543.3744142/94‑1 (MQ=60)

                             TGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGA                                                                   <  SRR4302543.1042577/94‑1 (MQ=60)

                             TGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGA                                                                   >  SRR4302543.6934869/1‑94 (MQ=60)

                              GATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAA                                                                  <  SRR4302543.582351/94‑1 (MQ=60)

                              GATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAA                                                                  >  SRR4302543.408776/1‑94 (MQ=60)

                                TGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAAC                                                                <  SRR4302543.4308229/94‑1 (MQ=60)

                                  CCATTTGATTCCATCTTTTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCA                                                              >  SRR4302543.4099630/1‑94 (MQ=60)

                                  CCATTTGATTCCATCTTTTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACAGCTGGAAACCA                                                              >  SRR4302543.4099629/1‑94 (MQ=60)

                                  CCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAAGGCAACGCCCCTCAGGACGGCTGGAAACCA                                                              >  SRR4302543.2587627/1‑94 (MQ=60)

                                  CCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCA                                                              <  SRR4302543.7420473/94‑1 (MQ=60)

                                   CATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAA                                                             >  SRR4302543.4961392/1‑94 (MQ=60)

                                   CATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAA                                                             >  SRR4302543.1320020/1‑94 (MQ=60)

                                   CATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAA                                                             >  SRR4302543.3318543/1‑94 (MQ=60)

                                   CATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAA                                                             <  SRR4302543.1378002/94‑1 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                            >  SRR4302543.1971221/1‑94 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                            >  SRR4302543.697593/1‑94 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                            <  SRR4302543.2015698/94‑1 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                            <  SRR4302543.7751710/94‑1 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                            >  SRR4302543.3976969/1‑94 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                            >  SRR4302543.3892739/1‑94 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                            >  SRR4302543.3046432/1‑94 (MQ=60)

                                     TTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACG                                                           <  SRR4302543.6617469/94‑1 (MQ=60)

                                     TTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACG                                                           <  SRR4302543.6959311/94‑1 (MQ=60)

                                     TTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACG                                                           <  SRR4302543.2403157/94‑1 (MQ=60)

                                     TGTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACG                                                           <  SRR4302543.2510626/94‑1 (MQ=60)

                                       TGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCC                                                         <  SRR4302543.7802963/94‑1 (MQ=60)

                                       TGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCC                                                         >  SRR4302543.2442493/1‑94 (MQ=60)

                                        GATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCA                                                        <  SRR4302543.1351163/94‑1 (MQ=60)

                                        GATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCA                                                        <  SRR4302543.5271299/94‑1 (MQ=60)

                                        GATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCA                                                        >  SRR4302543.1977116/1‑94 (MQ=60)

                                        GATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCA                                                        <  SRR4302543.3327496/94‑1 (MQ=60)

                                         ATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAA                                                       <  SRR4302543.1031372/94‑1 (MQ=60)

                                         ATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAA                                                       >  SRR4302543.5384732/1‑94 (MQ=60)

                                         ATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAA                                                       <  SRR4302543.1031373/94‑1 (MQ=60)

                                          TTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAA                                                      <  SRR4302543.787093/94‑1 (MQ=60)

                                           TCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAG                                                     <  SRR4302543.427373/94‑1 (MQ=60)

                                           TCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAG                                                     >  SRR4302543.2224223/1‑94 (MQ=60)

                                           TCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAG                                                     <  SRR4302543.1227313/94‑1 (MQ=60)

                                           TCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAG                                                     <  SRR4302543.4641003/94‑1 (MQ=60)

                                           TCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAG                                                     >  SRR4302543.296526/1‑94 (MQ=60)

                                            CCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGT                                                    <  SRR4302543.3536635/94‑1 (MQ=60)

                                            CCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGT                                                    >  SRR4302543.242977/1‑94 (MQ=60)

                                            CCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGT                                                    <  SRR4302543.2721913/94‑1 (MQ=60)

                                            CCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGT                                                    >  SRR4302543.2827072/1‑94 (MQ=60)

                                             CATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTC                                                   >  SRR4302543.5804099/1‑94 (MQ=60)

                                              ATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCT                                                  <  SRR4302543.5894216/94‑1 (MQ=60)

                                              ATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCT                                                  <  SRR4302543.5894217/94‑1 (MQ=60)

                                              ATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGACAGCAAAGCAACGACCCGCAGGACGGCTGGACACCAACcacaaagcct                                                  >  SRR4302543.4179536/1‑84 (MQ=60)

                                               GCTTGTCAAAATATGCTTTCATAACTAGCTCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTG                                                 <  SRR4302543.5451748/94‑1 (MQ=60)

                                                   GTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTT                                             <  SRR4302543.1152356/94‑1 (MQ=60)

                                                   GTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTT                                             <  SRR4302543.775923/94‑1 (MQ=60)

                                                   GTCAAAATATGCTTTCATAACTAGCCCGAAATCACAGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGACACCAACGCCCAAGTCTGGTTT                                             >  SRR4302543.7354564/1‑94 (MQ=60)

                                                   GTCAAAATATGCTATAATATCTAGCCCGTAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCAGGAAGCCAACGCCAAAGTCTGGTTT                                             <  SRR4302543.7093330/94‑1 (MQ=60)

                                                    TCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTT                                            <  SRR4302543.5365535/94‑1 (MQ=60)

                                                    GCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTT                                            <  SRR4302543.6653510/94‑1 (MQ=60)

                                                     CAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTT                                           <  SRR4302543.900615/94‑1 (MQ=60)

                                                     CAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTT                                           <  SRR4302543.947074/94‑1 (MQ=60)

                                                     CAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTT                                           >  SRR4302543.7775931/1‑94 (MQ=60)

                                                      AAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCATGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTG                                          >  SRR4302543.4905119/1‑94 (MQ=60)

                                                          TATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATT                                      <  SRR4302543.5067637/94‑1 (MQ=60)

                                                           ATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTT                                     <  SRR4302543.4718353/94‑1 (MQ=60)

                                                           ATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTT                                     <  SRR4302543.7959453/94‑1 (MQ=60)

                                                            TGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTT                                    <  SRR4302543.1955599/94‑1 (MQ=60)

                                                             GCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTT                                   <  SRR4302543.1026741/94‑1 (MQ=60)

                                                             GCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTT                                   >  SRR4302543.3411419/1‑94 (MQ=60)

                                                             GCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTT                                   <  SRR4302543.2040264/94‑1 (MQ=60)

                                                             GCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTT                                   >  SRR4302543.7795394/1‑94 (MQ=60)

                                                              CTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTT                                  >  SRR4302543.5601788/1‑94 (MQ=60)

                                                              CTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTT                                  >  SRR4302543.6838368/1‑94 (MQ=60)

                                                              CTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTT                                  >  SRR4302543.6838141/1‑94 (MQ=60)

                                                               TTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTG                                 <  SRR4302543.6502094/94‑1 (MQ=60)

                                                               TTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTG                                 <  SRR4302543.1142384/94‑1 (MQ=60)

                                                                TTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGT                                >  SRR4302543.3810979/1‑94 (MQ=60)

                                                                TTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGT                                <  SRR4302543.4218318/94‑1 (MQ=60)

                                                                 TCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTT                               <  SRR4302543.2640590/94‑1 (MQ=60)

                                                                 TCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAAGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTT                               <  SRR4302543.5470513/94‑1 (MQ=60)

                                                                  CATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTG                              <  SRR4302543.7596767/94‑1 (MQ=60)

                                                                  CATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTG                              >  SRR4302543.5139681/1‑94 (MQ=60)

                                                                  CATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTG                              <  SRR4302543.3822233/94‑1 (MQ=60)

                                                                   ATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGA                             >  SRR4302543.7276409/1‑94 (MQ=60)

                                                                   ATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGA                             >  SRR4302543.5638022/1‑94 (MQ=60)

                                                                   ATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGA                             <  SRR4302543.5057523/94‑1 (MQ=60)

                                                                   ATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGA                             <  SRR4302543.6509895/94‑1 (MQ=60)

                                                                    TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA                            <  SRR4302543.7697444/94‑1 (MQ=60)

                                                                    TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA                            <  SRR4302543.662140/94‑1 (MQ=60)

                                                                    TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA                            <  SRR4302543.7697445/94‑1 (MQ=60)

                                                                    TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA                            <  SRR4302543.5974914/94‑1 (MQ=60)

                                                                    TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCACCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA                            <  SRR4302543.7448661/94‑1 (MQ=60)

                                                                     AACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTatttgag                           >  SRR4302543.1377545/1‑87 (MQ=60)

                                                                     AACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAG                           >  SRR4302543.4400718/1‑94 (MQ=60)

                                                                     AACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAG                           >  SRR4302543.1377546/1‑94 (MQ=60)

                                                                     AACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGGTTTTGCATTTTTTGTTGAAG                           >  SRR4302543.4400717/1‑94 (MQ=60)

                                                                      ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAATCCTGGTTTTTGCATTTTTTGTTGcatt                          >  SRR4302543.2357504/1‑90 (MQ=60)

                                                                      ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGT                          <  SRR4302543.5432899/94‑1 (MQ=60)

                                                                      ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGT                          <  SRR4302543.3537233/94‑1 (MQ=60)

                                                                      ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGT                          <  SRR4302543.3388810/94‑1 (MQ=60)

                                                                       CTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTG                         <  SRR4302543.2392643/94‑1 (MQ=60)

                                                                       CTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTG                         >  SRR4302543.5986517/1‑94 (MQ=60)

                                                                       CTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTG                         <  SRR4302543.4638349/94‑1 (MQ=60)

                                                                         AGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCG                       >  SRR4302543.1943612/1‑94 (MQ=60)

                                                                          GCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGT                      <  SRR4302543.2117443/94‑1 (MQ=60)

                                                                           CCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTG                     >  SRR4302543.2030858/1‑94 (MQ=60)

                                                                            CCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGA                    >  SRR4302543.4011132/1‑94 (MQ=60)

                                                                             CGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAG                   <  SRR4302543.866923/94‑1 (MQ=60)

                                                                             CGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAG                   >  SRR4302543.4195979/1‑94 (MQ=60)

                                                                               AAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAA                 >  SRR4302543.4896142/1‑94 (MQ=60)

                                                                                AATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAA                <  SRR4302543.5884779/94‑1 (MQ=60)

                                                                                 ATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAT               <  SRR4302543.7455475/94‑1 (MQ=60)

                                                                                 ATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAT               <  SRR4302543.7981030/94‑1 (MQ=60)

                                                                                   CACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTT             <  SRR4302543.7585637/94‑1 (MQ=60)

                                                                                   CACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTT             <  SRR4302543.1716680/94‑1 (MQ=60)

                                                                                   CACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTT             >  SRR4302543.679350/1‑94 (MQ=60)

                                                                                    ACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTT            <  SRR4302543.7293044/94‑1 (MQ=60)

                                                                                     CCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTT           >  SRR4302543.3359106/1‑94 (MQ=60)

                                                                                     CCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTT           <  SRR4302543.3110704/94‑1 (MQ=60)

                                                                                      CGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTC          >  SRR4302543.5146756/1‑94 (MQ=60)

                                                                                      CGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTC          >  SRR4302543.6882064/1‑94 (MQ=60)

                                                                                      CGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTC          >  SRR4302543.1574613/1‑94 (MQ=60)

                                                                                       GCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCA         <  SRR4302543.5865361/94‑1 (MQ=60)

                                                                                       GCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCA         <  SRR4302543.6724983/94‑1 (MQ=60)

                                                                                       GCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCA         <  SRR4302543.1232745/94‑1 (MQ=60)

                                                                                           GCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTG     <  SRR4302543.6789928/94‑1 (MQ=60)

                                                                                           GCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTG     <  SRR4302543.4516737/94‑1 (MQ=60)

                                                                                             GGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGAA   >  SRR4302543.1239523/1‑94 (MQ=60)

                                                                                             GGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGAA   >  SRR4302543.3303601/1‑94 (MQ=60)

                                                                                             GGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGAA   >  SRR4302543.566081/1‑94 (MQ=60)

                                                                                             GGCAACGCAACGCCCCTC‑GGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGAAG  >  SRR4302543.7866258/1‑94 (MQ=60)

ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGAAG  >  NC_000913/4219341‑4219528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`