Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,284,295	A→G	V219A (GTA→GCA)	acs ←	acetyl‑CoA synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,284,295	0	A	G	99.7%	1037.9 / ‑5.5	329	V219A (GTA→GCA)	acs	acetyl‑CoA synthetase
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (167/161); total (167/162)
Fisher's exact test for biased strand distribution p-value = 4.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.68e-01

Only 100 of 350 total aligned reads displayed.

TGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTACCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACA  >  NC_000913/4284205‑4284384

tGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCATCAGTgcc                                                                                         >  1:1883466/1‑93 (MQ=255)

   tGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTgccacc                                                                                      >  2:5915534/1‑93 (MQ=255)

   tGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTgccacc                                                                                      >  1:3819154/1‑93 (MQ=255)

   tGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTgccacc                                                                                      >  1:2244638/1‑93 (MQ=255)

     cTGATCTCCCCCTTGCTCAACCAGGTCGGGCCACCACAGGTCCCCCCCTTCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCcaccac                                                                                    <  2:2752304/93‑1 (MQ=255)

     cTGACCGCTCGCTTCCTCACCCAGGTCGTCCCCCCACAGGTCGCGCCCTTCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCcaccac                                                                                    <  1:3184218/93‑1 (MQ=255)

      tGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACcaca                                                                                   <  1:3472050/93‑1 (MQ=255)

      tGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACcaca                                                                                   >  1:7398523/1‑93 (MQ=255)

      tGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACcaca                                                                                   >  2:1203504/1‑93 (MQ=255)

      tGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTCCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACcaca                                                                                   <  2:3421783/93‑1 (MQ=255)

       gATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAt                                                                                  >  1:6095547/1‑93 (MQ=255)

         tcgctcgcTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGc                                                                                >  1:6325362/1‑93 (MQ=255)

           gctcgctTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGctc                                                                              >  2:5965685/1‑93 (MQ=255)

           gctcgctTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGctc                                                                              >  1:5758536/1‑93 (MQ=255)

            ctcgctTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGctct                                                                             >  2:314533/1‑93 (MQ=255)

             ccgctTCCTCACCCAGGTCGTCCCACCACAGGTCGCCCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTa                                                                            <  1:6655662/92‑1 (MQ=255)

                ctTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGc                                                                         >  2:753614/1‑93 (MQ=255)

                 ttGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCt                                                                        <  1:7836022/93‑1 (MQ=255)

                 ttGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCt                                                                        >  2:5586159/1‑93 (MQ=255)

                   tctaaaCCAGGTCGCCCCCCCACTGGACGCGCCTTTCCTGCAAGTCATTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTgg                                                                      <  1:4238460/89‑1 (MQ=255)

                   gcccAACCAGCCCGTGCCCCCACGGGCCGCGCCCTTCCTCCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTgg                                                                      <  1:6537301/90‑1 (MQ=255)

                    cTCACCCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGt                                                                     <  1:453503/93‑1 (MQ=255)

                    cTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTggg                                                                     >  1:493915/1‑92 (MQ=255)

                    cTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGt                                                                     <  2:4753833/93‑1 (MQ=255)

                     tCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTg                                                                    >  1:46777/1‑93 (MQ=255)

                     ccAACCCGGTCGTGCCACCACAGGTCGCCCCTTTCCGGCTAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTg                                                                    <  1:830103/92‑1 (MQ=255)

                        aCCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACg                                                                 >  2:2392629/1‑93 (MQ=255)

                         ccAGGTCGTGCCACCCCAGGCCCCGCCTTTCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGt                                                                <  1:480550/93‑1 (MQ=255)

                          cAGGTGGTGCCCCCACAGGTCGCGCCCTTCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGtt                                                               <  2:3509307/93‑1 (MQ=255)

                          cAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGtt                                                               >  2:6170454/1‑93 (MQ=255)

                            ggTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCg                                                             >  2:4988476/1‑93 (MQ=255)

                              tCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCggg                                                           >  1:1650928/1‑93 (MQ=255)

                               cGTGCCACCACAGGTCGCGCCCTTCCTGCCATTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGt                                                          <  1:2145600/93‑1 (MQ=255)

                               cGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGt                                                          >  1:3417976/1‑93 (MQ=255)

                                gTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCTCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGCCGTTCgggct                                                         >  1:3121592/1‑91 (MQ=255)

                                gTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGtt                                                         >  1:4091739/1‑93 (MQ=255)

                                gTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGtt                                                         >  1:1266003/1‑93 (MQ=255)

                                 tGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGttt                                                        >  1:3654704/1‑93 (MQ=255)

                                   ccaccaCAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGttttt                                                      >  1:5528363/1‑93 (MQ=255)

                                     cccagAGGTCGCGCCCTTCCTGCCAGTCATTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCa                                                    <  2:13972/92‑1 (MQ=255)

                                     cccacAGGTCCCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCa                                                    <  1:2624367/92‑1 (MQ=255)

                                      ccacAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAg                                                   >  2:6426213/1‑93 (MQ=255)

                                      ccacAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAg                                                   >  1:3999326/1‑93 (MQ=255)

                                           ggTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGGTTTTTAGCGCGt                                              >  2:6019175/1‑93 (MQ=255)

                                             tCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGtca                                            >  2:4941946/1‑93 (MQ=255)

                                             tCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGtca                                            >  1:1937467/1‑93 (MQ=255)

                                              cggccccTCCCGGCCAGTCATTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGtcat                                           <  2:2196170/89‑1 (MQ=255)

                                               gcgcCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGtcatc                                          >  1:5293638/1‑93 (MQ=255)

                                               gcgcCCTTCCTGCCACTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGtcatc                                          <  1:5547750/93‑1 (MQ=255)

                                                cgcCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGtcatca                                         >  2:4585922/1‑93 (MQ=255)

                                                 gcCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCaa                                        >  2:5688718/1‑93 (MQ=255)

                                                 cccctccctGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCaa                                        <  2:6202920/92‑1 (MQ=255)

                                                  cccTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAAc                                       >  1:2848490/1‑93 (MQ=255)

                                                  cccTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAAc                                       >  2:2501802/1‑93 (MQ=255)

                                                  cccTTCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAAc                                       <  1:1442445/93‑1 (MQ=255)

                                                    cTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGt                                     <  2:6280897/93‑1 (MQ=255)

                                                     ttCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGtt                                    >  2:7355318/1‑93 (MQ=255)

                                                     ttCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGtt                                    >  2:2594609/1‑93 (MQ=255)

                                                     ttCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGtt                                    <  1:1520705/93‑1 (MQ=255)

                                                     tcccTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGtt                                    <  2:5329861/91‑1 (MQ=255)

                                                        cTGCCAGTCATTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGttttt                                 <  2:3785292/93‑1 (MQ=255)

                                                           caaGTAAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTttctt                              <  2:1051160/91‑1 (MQ=255)

                                                            cattCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTttcttc                             <  2:2228141/90‑1 (MQ=255)

                                                            cAGTCAATGTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTttcttc                             <  2:1613174/93‑1 (MQ=255)

                                                             cgTCAATTTTCCCGCCAGTCCGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTttcttcc                            <  1:7031281/92‑2 (MQ=255)

                                                             aGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCa                            >  2:3875981/1‑93 (MQ=255)

                                                             aGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCa                            <  2:1778779/93‑1 (MQ=255)

                                                              gTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAg                           >  2:1891993/1‑93 (MQ=255)

                                                              gTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAg                           <  1:7244623/93‑1 (MQ=255)

                                                                cAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCg                         <  1:5415322/93‑1 (MQ=255)

                                                                 aaTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCgg                        <  1:4456301/93‑1 (MQ=255)

                                                                 aaTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCgg                        >  2:5477385/1‑93 (MQ=255)

                                                                 aaTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCgg                        <  2:3598030/93‑1 (MQ=255)

                                                                  aTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGa                       <  2:7508498/93‑1 (MQ=255)

                                                                  aTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGa                       >  1:3039958/1‑93 (MQ=255)

                                                                  aTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGa                       <  1:2338046/93‑1 (MQ=255)

                                                                   ttttCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGaa                      >  1:283053/1‑93 (MQ=255)

                                                                   ttttCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGaa                      <  1:6799412/93‑1 (MQ=255)

                                                                     tccccGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATa                    <  2:7022077/91‑1 (MQ=255)

                                                                      tCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATAc                   >  2:4361790/1‑93 (MQ=255)

                                                                      tCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATAc                   <  2:6724273/93‑1 (MQ=255)

                                                                         ctccAGTACGCTTCAGTGCCACAACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTgc                <  2:5880803/91‑1 (MQ=255)

                                                                         cGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTgc                <  2:4509726/93‑1 (MQ=255)

                                                                           ccAGTACGCTTCAGTGCCCCCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTgcgc              <  1:5223569/93‑1 (MQ=255)

                                                                            cAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGcc             >  1:5209883/1‑93 (MQ=255)

                                                                            cAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGcc             <  2:326955/93‑1 (MQ=255)

                                                                             aGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGccc            >  2:2825093/1‑93 (MQ=255)

                                                                             aGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGccc            >  2:785055/1‑93 (MQ=255)

                                                                             aGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGccc            <  1:508223/93‑1 (MQ=255)

                                                                              gTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCg           >  2:6623530/1‑93 (MQ=255)

                                                                              gTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCg           >  1:4616070/1‑93 (MQ=255)

                                                                              gTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCCCCCg           >  1:5884016/1‑93 (MQ=255)

                                                                                aCGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgc         >  1:4340916/1‑93 (MQ=255)

                                                                                 cGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgcc        >  1:4859386/1‑92 (MQ=255)

                                                                                 cGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgca        >  2:1266992/1‑93 (MQ=255)

                                                                                   cTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgcacg      >  2:2858457/1‑93 (MQ=255)

                                                                                    ttCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgcacgc     >  2:3949891/1‑93 (MQ=255)

                                                                                     tCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgcacgca    <  2:7916310/93‑1 (MQ=255)

                                                                                     tCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgcacgca    >  2:101135/1‑93 (MQ=255)

                                                                                       aGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGcaca  <  1:3287457/93‑1 (MQ=255)

TGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTACCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACA  >  NC_000913/4284205‑4284384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTACCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTT  >  NC_000913/4284202‑4284388

GCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTG                                                                                               >  SRR4302543.5095858/1‑94 (MQ=60)

 CCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGC                                                                                              >  SRR4302543.1348738/1‑94 (MQ=60)

 CCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGC                                                                                              >  SRR4302543.1348740/1‑94 (MQ=60)

 CCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGC                                                                                              >  SRR4302543.6446290/1‑94 (MQ=60)

  CTGGTGCTGATCGCTCGCTTGCTCACCCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCC                                                                                             <  SRR4302543.7867891/94‑1 (MQ=60)

  CTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCC                                                                                             >  SRR4302543.6805539/1‑94 (MQ=60)

  CTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCATCAGTGCC                                                                                             >  SRR4302543.1900391/1‑94 (MQ=60)

  CTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCCCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCC                                                                                             <  SRR4302543.3759818/94‑1 (MQ=60)

  CTGGGGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCC                                                                                             <  SRR4302543.2284710/94‑1 (MQ=60)

   TGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCA                                                                                            >  SRR4302543.2136469/1‑94 (MQ=60)

    GGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCAC                                                                                           >  SRR4302543.171277/1‑94 (MQ=60)

     GTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACC                                                                                          >  SRR4302543.3852830/1‑94 (MQ=60)

     GTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACC                                                                                          >  SRR4302543.881285/1‑94 (MQ=60)

     GTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACC                                                                                          >  SRR4302543.2265002/1‑94 (MQ=60)

        CTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCACTTTTCCCGCCAGTACGCTTCAGTGCCACCACA                                                                                       >  SRR4302543.2500598/1‑94 (MQ=60)

        CTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACA                                                                                       >  SRR4302543.7469562/1‑94 (MQ=60)

        CTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACA                                                                                       >  SRR4302543.5208257/1‑94 (MQ=60)

        CTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACA                                                                                       >  SRR4302543.4145156/1‑94 (MQ=60)

        CTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACA                                                                                       >  SRR4302543.3860529/1‑94 (MQ=60)

        CTGACCGCTCGCTTCCTCACCCAGGTCGTCCCCCCACAGGTCGCGCCCTTCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACA                                                                                       <  SRR4302543.3212932/94‑1 (MQ=60)

         ttagcgctctctctctcaaccaggtcgcgcccccacggcgcgccCCCTTCCTGCCATTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      <  SRR4302543.6052170/50‑1 (MQ=60)

         tgctctctcgttgccccacccgggtcgtccccccacgggccgccCCCTTCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      <  SRR4302543.2114832/50‑1 (MQ=60)

         TGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      <  SRR4302543.3503149/94‑1 (MQ=60)

         TGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      >  SRR4302543.2141692/1‑94 (MQ=60)

         TGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      >  SRR4302543.6153309/1‑94 (MQ=60)

         TGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTAAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      <  SRR4302543.5382246/94‑1 (MQ=60)

         TGATCGCTCGCTTGCTCAACCAGGTCGTCCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACAT                                                                                      <  SRR4302543.6158676/94‑1 (MQ=60)

          GATCTCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTAAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATG                                                                                     <  SRR4302543.5056797/94‑1 (MQ=60)

           ATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGC                                                                                    >  SRR4302543.6384851/1‑94 (MQ=60)

             CGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTC                                                                                  >  SRR4302543.5811003/1‑94 (MQ=60)

               CTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCACTTTTCCCGCCAGCACGCTTCAGTGCCACCACATGCTCTC                                                                                >  SRR4302543.2681291/1‑94 (MQ=60)

               CTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTA                                                                                >  SRR4302543.4772599/1‑94 (MQ=60)

               CTCGCTTGCTCAACCAGGTCGTCCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTA                                                                                <  SRR4302543.7050271/94‑1 (MQ=60)

                ccgccTGCTCAACCAGGTCGCACCCCCACGGGCCGCCCCCTTCCTCCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTAC                                                                               <  SRR4302543.6636038/89‑1 (MQ=44)

                cccCTTGCTCACCCGGGTCGTGCCACCACAGGTCGCCCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTAC                                                                               <  SRR4302543.5961787/91‑1 (MQ=60)

                CCGCTTCCTCACCCAGGTCGTCCCACCACAGGTCGCCCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTAC                                                                               <  SRR4302543.6718499/94‑1 (MQ=60)

                 CGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACG                                                                              >  SRR4302543.6054682/1‑94 (MQ=60)

                 CGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACG                                                                              <  SRR4302543.3763370/94‑1 (MQ=60)

                 CGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACG                                                                              >  SRR4302543.1452709/1‑94 (MQ=60)

                   CTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCT                                                                            >  SRR4302543.1426349/1‑94 (MQ=60)

                   CTTGCTCAACCAGGTCGTCCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCT                                                                            <  SRR4302543.2216563/94‑1 (MQ=60)

                    TTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTG                                                                           <  SRR4302543.7909784/94‑1 (MQ=60)

                     TGCTCAACCAGGTCGTCCCACCACAGGCCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGG                                                                          <  SRR4302543.15468/94‑1 (MQ=60)

                      tctcacccaggccgttcctccacaggctGCGCCTTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGT                                                                         <  SRR4302543.4143049/66‑1 (MQ=60)

                      tctaaaccaggtcgcccccccactggaCGCGCCTTTCCTGCAAGTCATTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGT                                                                         <  SRR4302543.4276908/67‑1 (MQ=52)

                      gcacacccagggcgggccaccccgGGTCGCCCCCTCCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCTGTGCCACCACATGCTCTACGCTGGT                                                                         <  SRR4302543.1934785/70‑1 (MQ=60)

                      GCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGT                                                                         >  SRR4302543.3594368/1‑94 (MQ=60)

                      GCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGT                                                                         >  SRR4302543.5633126/1‑94 (MQ=60)

                      GCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGG                                                                         >  SRR4302543.498486/1‑94 (MQ=60)

                      GCCCAACCAGCCCGTGCCCCCACGGGCCGCGCCCTTCCTCCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGT                                                                         <  SRR4302543.6598836/94‑1 (MQ=60)

                       ctcaccgaggtggtcCCACCCCAGGTCGCCCCTTTCCTGCCAGTAATTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTG                                                                        <  SRR4302543.4644052/79‑1 (MQ=49)

                       CTCACCCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTG                                                                        <  SRR4302543.457729/94‑1 (MQ=60)

                       CTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTG                                                                        >  SRR4302543.47206/1‑94 (MQ=60)

                       CTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAACTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTG                                                                        >  SRR4302543.2672082/1‑94 (MQ=60)

                        ccaaccaggtgggcCCACCACAGGTCGCCCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGA                                                                       <  SRR4302543.837420/80‑1 (MQ=60)

                        TCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGA                                                                       >  SRR4302543.3337447/1‑94 (MQ=60)

                        CCAACCCGGTCGTGCCACCACAGGTCGCCCCTTTCCGGCTAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGA                                                                       <  SRR4302543.837419/94‑1 (MQ=60)

                         CACCCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGAC                                                                      <  SRR4302543.1950676/94‑1 (MQ=60)

                         CAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGAC                                                                      <  SRR4302543.7250078/94‑1 (MQ=60)

                         CAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGAC                                                                      >  SRR4302543.3306870/1‑94 (MQ=60)

                         CAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGAC                                                                      >  SRR4302543.4334784/1‑94 (MQ=60)

                            ccagtccgcgccccccccggcccCGCCCTTCCTGCCAGTCATTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTT                                                                   <  SRR4302543.831485/71‑1 (MQ=60)

                            CCAGTTCGTGCCACCACAGGTCGCCCCCTCCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTT                                                                   <  SRR4302543.159919/94‑1 (MQ=60)

                            CCAGGTCGTGCCACCCCAGGCCCCGCCTTTCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTT                                                                   <  SRR4302543.484993/94‑1 (MQ=60)

                            CCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTT                                                                   >  SRR4302543.6733708/1‑94 (MQ=60)

                             caggtgtgccccCCACAGGTCGCGCCCTTCCTGCCGGTAAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTC                                                                  <  SRR4302543.7208552/82‑1 (MQ=60)

                             CAGGTCGTGCCACCACGGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTC                                                                  <  SRR4302543.7270285/94‑1 (MQ=60)

                             CAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTC                                                                  <  SRR4302543.3575003/94‑1 (MQ=60)

                             CAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTC                                                                  >  SRR4302543.7996746/1‑94 (MQ=60)

                              CGGTCGTGCCCCCACGGGTCCCGCCCTTCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCG                                                                 <  SRR4302543.6191814/94‑1 (MQ=60)

                              AGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCG                                                                 >  SRR4302543.451969/1‑94 (MQ=60)

                              AGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCG                                                                 >  SRR4302543.6600756/1‑94 (MQ=60)

                               gtgaccgccacagaaggccacgggctgcctgccacatgatagTCCCGGCAGTACGCTTCAGTGACACCACATGCTCTACGCTGGTGACGTTCGG                                                                <  SRR4302543.3365239/52‑1 (MQ=49)

                               GGTCGTCCCCCCACGGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGG                                                                <  SRR4302543.3268090/94‑1 (MQ=60)

                               GGTCGGCCCACCACAGGTCGCGCCCTCCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGG                                                                <  SRR4302543.934017/94‑1 (MQ=60)

                               GCTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGG                                                                <  SRR4302543.5086536/94‑1 (MQ=60)

                                GTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGG                                                               >  SRR4302543.1665696/1‑94 (MQ=60)

                                GTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGG                                                               >  SRR4302543.6944440/1‑94 (MQ=60)

                                 TCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGT                                                              >  SRR4302543.3448569/1‑94 (MQ=60)

                                  CGTGCCACCACAGGTCGCGCCCTTCCTGCCATTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTT                                                             <  SRR4302543.2164810/94‑1 (MQ=60)

                                  CGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCTCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGCCGTTCGGGCT                                                             >  SRR4302543.3149668/1‑94 (MQ=60)

                                  CGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTT                                                             >  SRR4302543.1277333/1‑94 (MQ=60)

                                  CGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTT                                                             >  SRR4302543.4090815/1‑94 (MQ=60)

                                  CGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTT                                                             >  SRR4302543.4128441/1‑94 (MQ=60)

                                   GTGCCACCACAGGTCGTGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTT                                                            >  SRR4302543.1506164/1‑94 (MQ=60)

                                   GTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTT                                                            >  SRR4302543.3686805/1‑94 (MQ=60)

                                   GTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTT                                                            >  SRR4302543.5779507/1‑94 (MQ=60)

                                    TGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTT                                                           >  SRR4302543.6573277/1‑94 (MQ=60)

                                    TGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTT                                                           >  SRR4302543.4940900/1‑94 (MQ=60)

                                     GCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTT                                                          >  SRR4302543.5578584/1‑94 (MQ=60)

                                     GCCACCACAGGCCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTT                                                          <  SRR4302543.7638333/94‑1 (MQ=60)

                                      CCACCACGGGCGGCGCCCTTCTTGCCGGTCATTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTC                                                         <  SRR4302543.7364672/94‑1 (MQ=60)

                                      CCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTC                                                         >  SRR4302543.4926349/1‑94 (MQ=60)

                                      CCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTC                                                         >  SRR4302543.527836/1‑94 (MQ=60)

                                       caccccgggccgccCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCA                                                        <  SRR4302543.5880627/80‑1 (MQ=60)

                                       CACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGGTTTTCA                                                        >  SRR4302543.3428392/1‑94 (MQ=60)

                                        CCCACAGGTCCCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAG                                                       <  SRR4302543.2648127/94‑1 (MQ=60)

                                        CCCACAGGCCCCGCCTTTCCTGCCATTCAATTGCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAG                                                       <  SRR4302543.4479650/94‑1 (MQ=60)

                                        ACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAG                                                       >  SRR4302543.4034988/1‑94 (MQ=60)

                                         CCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGC                                                      >  SRR4302543.1502748/1‑94 (MQ=60)

                                         CCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGC                                                      >  SRR4302543.449653/1‑94 (MQ=60)

                                          CACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCG                                                     >  SRR4302543.4606300/1‑94 (MQ=60)

                                          CACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCG                                                     >  SRR4302543.5150577/1‑94 (MQ=60)

                                          CACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCG                                                     >  SRR4302543.3185/1‑94 (MQ=60)

                                           CCAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGC                                                    <  SRR4302543.4775506/94‑1 (MQ=60)

                                           CCAGGTCGCCCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGC                                                    <  SRR4302543.6466931/94‑1 (MQ=60)

                                           ACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGC                                                    >  SRR4302543.5476318/1‑94 (MQ=60)

                                            CAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCG                                                   <  SRR4302543.6811474/94‑1 (MQ=60)

                                              GGTCGCCCCCTCCCTCCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTC                                                 <  SRR4302543.2862043/94‑1 (MQ=60)

                                               GTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCA                                                >  SRR4302543.1954877/1‑94 (MQ=60)

                                               GTCGCCCCCTTCTTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCA                                                <  SRR4302543.7998185/94‑1 (MQ=60)

                                               GGCGCCCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCA                                                <  SRR4302543.2470454/94‑1 (MQ=60)

                                                GCGCGCCCTTCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCAT                                               <  SRR4302543.55595/94‑1 (MQ=60)

                                                 CGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATC                                              >  SRR4302543.5341440/1‑94 (MQ=60)

                                                  GCGCCCTTCCTGCCACTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCA                                             <  SRR4302543.5598202/94‑1 (MQ=60)

                                                  GCCCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCA                                             <  SRR4302543.468026/94‑1 (MQ=60)

                                                  GCCCCCTCCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCA                                             <  SRR4302543.2851600/94‑1 (MQ=60)

                                                    GCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAAC                                           >  SRR4302543.2874495/1‑94 (MQ=60)

                                                    GCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAAC                                           >  SRR4302543.2874496/1‑94 (MQ=60)

                                                    GCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAAC                                           >  SRR4302543.4190085/1‑94 (MQ=60)

                                                     CCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACG                                          >  SRR4302543.1914858/1‑94 (MQ=60)

                                                     CCCTTCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACG                                          <  SRR4302543.1455474/94‑1 (MQ=60)

                                                     CCCTCCCTGCGAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACG                                          <  SRR4302543.611751/94‑1 (MQ=60)

                                                      CCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGT                                         >  SRR4302543.3817089/1‑94 (MQ=60)

                                                       CTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTT                                        >  SRR4302543.2980965/1‑94 (MQ=60)

                                                       CTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTT                                        >  SRR4302543.3346482/1‑94 (MQ=60)

                                                       CTCCCTGCCAGTCATTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTT                                        <  SRR4302543.3025281/94‑1 (MQ=60)

                                                        TTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTT                                       <  SRR4302543.3195726/94‑1 (MQ=60)

                                                        TTCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTT                                       <  SRR4302543.1534358/94‑1 (MQ=60)

                                                         TCCTGCCAGTCAATTTTCCCGCCAGTACGCCTCAGTGCCACCACATGCTCTACGCTGGTGACGTTTGGGGCGTTCAGCGCGTCATCAACGTTTT                                      >  SRR4302543.7105193/1‑94 (MQ=60)

                                                          CCTGCCAGTCAATTTTCCCGCCAGTTCGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTT                                     <  SRR4302543.5430474/94‑1 (MQ=60)

                                                          CCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTT                                     >  SRR4302543.5307897/1‑94 (MQ=60)

                                                           CTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTC                                    >  SRR4302543.347498/1‑94 (MQ=60)

                                                            TGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCT                                   <  SRR4302543.5316655/94‑1 (MQ=60)

                                                            TGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCT                                   >  SRR4302543.3101517/1‑94 (MQ=60)

                                                             GCCATTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTT                                  <  SRR4302543.3037703/94‑1 (MQ=60)

                                                               CAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCA                                >  SRR4302543.308573/1‑94 (MQ=60)

                                                                CGTCAATTTTCCCGCCAGTCCGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCCG                               <  SRR4302543.7098871/94‑1 (MQ=60)

                                                                CGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAG                               <  SRR4302543.5185136/94‑1 (MQ=60)

                                                                AGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAG                               >  SRR4302543.231471/1‑94 (MQ=60)

                                                                AGTAAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAG                               <  SRR4302543.1816828/94‑1 (MQ=60)

                                                                 agcacttcTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGC                              <  SRR4302543.5595503/86‑1 (MQ=60)

                                                                 GTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGC                              >  SRR4302543.4856162/1‑94 (MQ=60)

                                                                 GTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGC                              >  SRR4302543.7632703/1‑94 (MQ=60)

                                                                 GTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGC                              <  SRR4302543.7314721/94‑1 (MQ=60)

                                                                 GTCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGC                              <  SRR4302543.5595502/94‑1 (MQ=60)

                                                                 ATCAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGC                              <  SRR4302543.5595501/94‑1 (MQ=60)

                                                                   CATTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGG                            <  SRR4302543.4765123/94‑1 (MQ=60)

                                                                   CAATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGG                            <  SRR4302543.5464587/94‑1 (MQ=60)

                                                                    AATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGA                           <  SRR4302543.4496671/94‑1 (MQ=60)

                                                                    AATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGA                           <  SRR4302543.4496673/94‑1 (MQ=60)

                                                                    AATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGA                           >  SRR4302543.4588164/1‑94 (MQ=60)

                                                                    AATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGA                           >  SRR4302543.3067375/1‑94 (MQ=60)

                                                                     ATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAA                          >  SRR4302543.285566/1‑94 (MQ=60)

                                                                     ATTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAA                          <  SRR4302543.2359262/94‑1 (MQ=60)

                                                                      ttcaCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAAT                         <  SRR4302543.4085966/90‑1 (MQ=60)

                                                                      TTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAAT                         <  SRR4302543.6863622/94‑1 (MQ=60)

                                                                      TTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAAT                         <  SRR4302543.2334595/94‑1 (MQ=60)

                                                                       TCTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATA                        <  SRR4302543.7377498/94‑1 (MQ=60)

                                                                        TCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATAC                       <  SRR4302543.4332193/94‑1 (MQ=60)

                                                                         TCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACT                      <  SRR4302543.3906583/94‑1 (MQ=60)

                                                                         TCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACT                      <  SRR4302543.3911606/94‑1 (MQ=60)

                                                                         TCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACT                      <  SRR4302543.2184701/94‑1 (MQ=60)

                                                                          CCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTG                     >  SRR4302543.3555839/1‑94 (MQ=60)

                                                                           CCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGC                    <  SRR4302543.5567450/94‑1 (MQ=60)

                                                                           CCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGC                    <  SRR4302543.2056795/94‑1 (MQ=60)

                                                                            CGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCG                   <  SRR4302543.3483243/94‑1 (MQ=60)

                                                                             GCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGC                  >  SRR4302543.178956/1‑94 (MQ=60)

                                                                              CCAGTACGCTTCAGTGCCCCCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCC                 <  SRR4302543.5270601/94‑1 (MQ=60)

                                                                              CCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCC                 >  SRR4302543.5256825/1‑94 (MQ=60)

                                                                              CCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCC                 >  SRR4302543.5256826/1‑94 (MQ=60)

                                                                               CAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCC                <  SRR4302543.5766880/94‑1 (MQ=60)

                                                                                AGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCG               >  SRR4302543.2299616/1‑94 (MQ=60)

                                                                                AGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCG               >  SRR4302543.4657999/1‑94 (MQ=60)

                                                                                AGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCG               <  SRR4302543.512946/94‑1 (MQ=60)

                                                                                AGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCCCCCG               >  SRR4302543.5937642/1‑94 (MQ=60)

                                                                                 GTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGG              <  SRR4302543.1515885/94‑1 (MQ=60)

                                                                                 GTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGG              <  SRR4302543.4532667/94‑1 (MQ=60)

                                                                                  TACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGC             >  SRR4302543.4380290/1‑94 (MQ=60)

                                                                                  TACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGC             >  SRR4302543.7623657/1‑94 (MQ=60)

                                                                                   ACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCC            >  SRR4302543.4903697/1‑94 (MQ=60)

                                                                                    CGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCAC           >  SRR4302543.3178174/1‑94 (MQ=60)

                                                                                    CGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCAC           <  SRR4302543.6577655/94‑1 (MQ=60)

                                                                                     GCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACG          <  SRR4302543.4660428/94‑1 (MQ=60)

                                                                                     GCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACG          >  SRR4302543.4893539/1‑94 (MQ=60)

                                                                                      CTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGC         >  SRR4302543.4927290/1‑94 (MQ=60)

                                                                                        TCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCAC       <  SRR4302543.5819034/94‑1 (MQ=60)

                                                                                        TCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCAC       <  SRR4302543.5265471/94‑1 (MQ=60)

                                                                                          AGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACAC     <  SRR4302543.3317126/94‑1 (MQ=60)

                                                                                          AGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACAC     >  SRR4302543.154432/1‑94 (MQ=60)

                                                                                          AGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACAC     >  SRR4302543.1997737/1‑94 (MQ=60)

                                                                                           GTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACC    >  SRR4302543.5790247/1‑94 (MQ=60)

                                                                                            TGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCT   <  SRR4302543.3031551/94‑1 (MQ=60)

                                                                                            TGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCT   <  SRR4302543.537806/94‑1 (MQ=60)

                                                                                             GCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTT  >  SRR4302543.4655622/1‑94 (MQ=60)

                                                                                             GCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTT  >  SRR4302543.7832149/1‑94 (MQ=60)

GCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTACCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTT  >  NC_000913/4284202‑4284388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`