Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,295,417 G→A P510L (CCG→CTG)  fdhF ← selenopolypeptide subunit of formate dehydrogenase H

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,295,4170GA99.4% 1247.5 / ‑5.0 344P510L (CCG→CTG) fdhFselenopolypeptide subunit of formate dehydrogenase H
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base A (184/158);  total (185/159)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 353 total aligned reads displayed.

AAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCGGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGATT  >  NC_000913/4295325‑4295506
                                                                                            |                                                                                         
  gTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCagg                                                                                         >  1:6501725/1‑93 (MQ=255)
  gTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCagg                                                                                         <  2:4910644/93‑1 (MQ=255)
   tCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGc                                                                                        >  1:6103974/1‑93 (MQ=255)
   tCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGc                                                                                        <  2:6083795/93‑1 (MQ=255)
    ccccTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGcc                                                                                       >  1:1068400/1‑92 (MQ=255)
    ccccTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGca                                                                                       <  2:1943071/93‑1 (MQ=255)
    ccccTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGca                                                                                       >  2:6301006/1‑93 (MQ=255)
      ccTGATCGGCATCTGAAGTATCGCGGCAGGGCCACTGAATGAAGCCCAGTTCGCCCATTATCTCGTAAGTCGCACCGTAGAAATCCaggacca                                                                                     >  1:7630413/1‑89 (MQ=255)
       cTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAg                                                                                    >  2:1715583/1‑93 (MQ=255)
        tGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGa                                                                                   >  2:1490199/1‑93 (MQ=255)
        tGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGa                                                                                   >  1:4563175/1‑93 (MQ=255)
        tGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGa                                                                                   >  2:6063084/1‑93 (MQ=255)
        tGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGa                                                                                   >  1:2235341/1‑93 (MQ=255)
          aTCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGAta                                                                                 >  1:1481188/1‑92 (MQ=255)
           tCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACTGTAGAAATCCAGGCACAGATGa                                                                                <  2:3480885/93‑1 (MQ=255)
           tCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGa                                                                                <  1:1251178/93‑1 (MQ=255)
           tCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGa                                                                                >  2:7927512/1‑93 (MQ=255)
           tCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGa                                                                                <  1:518003/93‑1 (MQ=255)
           tCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGa                                                                                <  2:5582243/93‑1 (MQ=255)
           tCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGa                                                                                >  1:7331370/1‑93 (MQ=255)
           tCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGa                                                                                <  1:1985607/93‑1 (MQ=255)
           tCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGa                                                                                <  1:789969/93‑1 (MQ=255)
             ggCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACg                                                                              >  1:4725523/1‑93 (MQ=255)
             ggCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACg                                                                              >  2:422892/1‑93 (MQ=255)
              gCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGc                                                                             >  1:1955836/1‑93 (MQ=255)
                aTCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCaa                                                                           >  2:511540/1‑93 (MQ=255)
                 tCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAAc                                                                          >  2:4740325/1‑93 (MQ=255)
                   tGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTc                                                                        >  2:2865438/1‑93 (MQ=255)
                   tGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCCCCCATTTTCTCGTAAGCCGCACCGTAGAAACCCAGCAACAGATGAGGTAACTc                                                                        >  2:2165559/1‑93 (MQ=255)
                       gTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATcc                                                                    <  2:1340633/93‑1 (MQ=255)
                        tATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATccc                                                                   <  2:3582931/93‑1 (MQ=255)
                        tATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATccc                                                                   >  2:4672200/1‑93 (MQ=255)
                              ggCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGAtct                                                             >  1:1367134/1‑93 (MQ=255)
                                 aaGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCt                                                          <  2:1825026/93‑1 (MQ=255)
                                  aGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTg                                                         >  2:2951502/1‑93 (MQ=255)
                                  aGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTg                                                         >  2:769656/1‑93 (MQ=255)
                                  aGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTg                                                         <  1:6906645/93‑1 (MQ=255)
                                    gCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTggg                                                       <  1:2837225/93‑1 (MQ=255)
                                      cACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGgtg                                                     <  1:3927193/93‑1 (MQ=255)
                                      cACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGgtg                                                     >  2:24705/1‑93 (MQ=255)
                                       aCTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGgtgt                                                    >  2:7586953/1‑93 (MQ=255)
                                       aCTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGgtgt                                                    >  2:1029225/1‑93 (MQ=255)
                                        cTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGcgtt                                                   >  1:5712024/1‑93 (MQ=255)
                                             tgaaGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTTCTGGGtgttgttgt                                              >  1:5933445/1‑93 (MQ=255)
                                             tgaaGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCCCCTGGGtgttgttgt                                              <  1:7741085/93‑1 (MQ=255)
                                              gaaGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACACATCCCAGATCTCCTGGGTGTTGTTGTa                                             <  2:7231088/93‑1 (MQ=255)
                                               aaGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAg                                            <  2:1437149/93‑1 (MQ=255)
                                                 gCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTg                                          >  1:6723974/1‑93 (MQ=255)
                                                   ccAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCa                                        >  2:7765306/1‑93 (MQ=255)
                                                   ccAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCa                                        >  1:5154701/1‑93 (MQ=255)
                                                   ccAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCa                                        >  1:2726791/1‑93 (MQ=255)
                                                   ccAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTACa                                        >  2:3119109/1‑93 (MQ=255)
                                                    cAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCAt                                       >  2:394748/1‑93 (MQ=255)
                                                     aGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATc                                      <  2:1652566/93‑1 (MQ=255)
                                                      gTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCg                                     >  1:4097509/1‑93 (MQ=255)
                                                      gTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCg                                     >  2:6409338/1‑93 (MQ=255)
                                                      gTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCg                                     >  2:700141/1‑93 (MQ=255)
                                                      gTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCg                                     >  1:3075194/1‑93 (MQ=255)
                                                       ttCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCgg                                    >  2:893602/1‑93 (MQ=255)
                                                       ttCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCgg                                    >  1:6135056/1‑93 (MQ=255)
                                                        tCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGa                                   <  1:3543520/93‑1 (MQ=255)
                                                          gCCCATTTTCTCTTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGTTGTTGTTGTTGTGCATCGGATa                                 >  2:5660844/1‑93 (MQ=255)
                                                          gCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATa                                 <  1:342377/93‑1 (MQ=255)
                                                            ccATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAAc                               <  2:4563389/93‑1 (MQ=255)
                                                            ccATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAAc                               >  1:5790002/1‑93 (MQ=255)
                                                               ttttCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCa                            >  1:3670251/1‑93 (MQ=255)
                                                                 ttCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATa                          <  2:6769141/93‑1 (MQ=255)
                                                                 ttCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATa                          <  1:5314151/93‑1 (MQ=255)
                                                                  tctcGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATAc                         <  2:7080333/93‑1 (MQ=255)
                                                                  tctcGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATAc                         <  1:7492589/93‑1 (MQ=255)
                                                                  tctcGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATAc                         >  1:6541912/1‑93 (MQ=255)
                                                                    tcGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACgg                       >  1:131617/1‑93 (MQ=255)
                                                                     cGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACggg                      <  1:930710/93‑1 (MQ=255)
                                                                     cGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACggg                      <  1:6272524/93‑1 (MQ=255)
                                                                     cGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACggg                      <  2:4498838/93‑1 (MQ=255)
                                                                      gTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGt                     <  2:532258/93‑1 (MQ=255)
                                                                      gTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGt                     <  1:2553304/93‑1 (MQ=255)
                                                                       tAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTg                    >  2:5888018/1‑93 (MQ=255)
                                                                          gTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCg                 >  1:4964334/1‑93 (MQ=255)
                                                                          gTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCg                 >  1:7034406/1‑93 (MQ=255)
                                                                          gTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCg                 <  2:6468497/93‑1 (MQ=255)
                                                                            cGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGAt               >  1:5872870/1‑93 (MQ=255)
                                                                             gCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGAtt              <  1:4299717/93‑1 (MQ=255)
                                                                               cccGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTc            <  1:2496096/92‑1 (MQ=255)
                                                                               aCCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTc            <  2:3184212/93‑1 (MQ=255)
                                                                               aCCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTc            >  2:6225818/1‑93 (MQ=255)
                                                                                ccGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCa           >  1:5486314/1‑93 (MQ=255)
                                                                                ccGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCa           <  1:1628668/93‑1 (MQ=255)
                                                                                 cGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCAc          >  1:2285904/1‑93 (MQ=255)
                                                                                  gTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCAcg         >  1:6007658/1‑92 (MQ=255)
                                                                                  gTAGAAATCCAGGCACAGATGACGCAACTCATCACAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACt         >  2:2376193/1‑93 (MQ=255)
                                                                                   tAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACtg        >  1:3750593/1‑93 (MQ=255)
                                                                                    aGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACtga       <  1:798329/93‑1 (MQ=255)
                                                                                     gAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACtgat      >  1:5396713/1‑93 (MQ=255)
                                                                                      aaaTCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACtgatg     <  1:4990290/93‑1 (MQ=255)
                                                                                       aaTCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATGCGGGTGGCGATTTCACtgatga    <  2:3277043/93‑1 (MQ=255)
                                                                                       aaTCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACtgatga    <  2:119927/93‑1 (MQ=255)
                                                                                        aTCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTgatgat   >  2:254889/1‑93 (MQ=255)
                                                                                         tCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGAtt  >  1:3221978/1‑93 (MQ=255)
                                                                                         tCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGAtt  >  2:4393403/1‑93 (MQ=255)
                                                                                            |                                                                                         
AAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCGGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGATT  >  NC_000913/4295325‑4295506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GAAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCGGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGATTTGCC  >  NC_000913/4295324‑4295510
                                                                                             |                                                                                             
GAAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGCACTCCG                                                                                               >  SRR4302543.198241/1‑94 (MQ=60)
GAAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCA                                                                                               <  SRR4302543.2630807/94‑1 (MQ=60)
 AAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAG                                                                                              >  SRR4302543.3642181/1‑94 (MQ=60)
  AGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGG                                                                                             >  SRR4302543.6562974/1‑94 (MQ=60)
  AGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGG                                                                                             >  SRR4302543.4997920/1‑94 (MQ=60)
  AGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGG                                                                                             <  SRR4302543.400492/94‑1 (MQ=60)
   GTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGC                                                                                            >  SRR4302543.6161803/1‑94 (MQ=60)
    TCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCA                                                                                           <  SRR4302543.162837/94‑1 (MQ=60)
     CCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCAC                                                                                          >  SRR4302543.5217947/1‑94 (MQ=60)
      CCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACA                                                                                         >  SRR4302543.6895478/1‑94 (MQ=60)
      CCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACA                                                                                         >  SRR4302543.6230983/1‑94 (MQ=60)
       CCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAG                                                                                        >  SRR4302543.6281659/1‑94 (MQ=60)
        CTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGA                                                                                       >  SRR4302543.6140019/1‑94 (MQ=60)
        CTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGA                                                                                       >  SRR4302543.2255560/1‑94 (MQ=60)
        CTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGA                                                                                       >  SRR4302543.4604705/1‑94 (MQ=60)
        CTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGA                                                                                       >  SRR4302543.4604702/1‑94 (MQ=60)
         TGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGAT                                                                                      <  SRR4302543.1456198/94‑1 (MQ=60)
         TGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGAT                                                                                      <  SRR4302543.2820688/94‑1 (MQ=60)
         TGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGAT                                                                                      <  SRR4302543.3930649/94‑1 (MQ=60)
         TGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGAT                                                                                      <  SRR4302543.845982/94‑1 (MQ=60)
          GATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATG                                                                                     >  SRR4302543.6998180/1‑94 (MQ=60)
          GATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATG                                                                                     >  SRR4302543.3212927/1‑94 (MQ=60)
          GATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATG                                                                                     <  SRR4302543.4244184/94‑1 (MQ=60)
          GATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATA                                                                                     >  SRR4302543.1494528/1‑94 (MQ=60)
           ATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGA                                                                                    >  SRR4302543.2008859/1‑94 (MQ=60)
           ATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGA                                                                                    >  SRR4302543.7401925/1‑94 (MQ=60)
            TCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGAC                                                                                   <  SRR4302543.522813/94‑1 (MQ=60)
            TCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGAC                                                                                   <  SRR4302543.1262398/94‑1 (MQ=60)
            TCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGAC                                                                                   <  SRR4302543.1262399/94‑1 (MQ=60)
            TCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGAC                                                                                   <  SRR4302543.796914/94‑1 (MQ=60)
            TCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGAC                                                                                   <  SRR4302543.3346020/94‑1 (MQ=60)
            TCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGAC                                                                                   <  SRR4302543.2003413/94‑1 (MQ=60)
            TCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGAC                                                                                   >  SRR4302543.7980096/1‑94 (MQ=60)
             CGGCATCTGATGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCTCCCAGTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACG                                                                                  >  SRR4302543.3080993/1‑94 (MQ=60)
             CGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGCAATCCAGGCACAGATGACG                                                                                  >  SRR4302543.3384433/1‑94 (MQ=60)
             CGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACG                                                                                  <  SRR4302543.3737021/94‑1 (MQ=60)
             CGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACG                                                                                  >  SRR4302543.4768702/1‑94 (MQ=60)
              GGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGC                                                                                 >  SRR4302543.6167665/1‑94 (MQ=60)
              GGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGC                                                                                 >  SRR4302543.1973379/1‑94 (MQ=60)
              GGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGC                                                                                 >  SRR4302543.819040/1‑94 (MQ=60)
               GCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCA                                                                                >  SRR4302543.4095451/1‑94 (MQ=60)
                 ATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAAC                                                                              <  SRR4302543.4853657/94‑1 (MQ=60)
                 ATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAAC                                                                              >  SRR4302543.5092963/1‑94 (MQ=60)
                 ATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAAC                                                                              >  SRR4302543.5092964/1‑94 (MQ=60)
                 ATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAAC                                                                              >  SRR4302543.2561172/1‑94 (MQ=60)
                 ATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAAC                                                                              >  SRR4302543.6459349/1‑94 (MQ=60)
                  TCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACACAACT                                                                             <  SRR4302543.408617/94‑1 (MQ=60)
                   CTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTC                                                                            >  SRR4302543.2742823/1‑94 (MQ=60)
                   CTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTC                                                                            >  SRR4302543.7671839/1‑94 (MQ=60)
                     GAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCAT                                                                          >  SRR4302543.7379406/1‑94 (MQ=60)
                      AAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATC                                                                         >  SRR4302543.1389407/1‑94 (MQ=60)
                      AAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATC                                                                         <  SRR4302543.2133850/94‑1 (MQ=60)
                      AAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATC                                                                         >  SRR4302543.1349736/1‑94 (MQ=60)
                      AAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATC                                                                         <  SRR4302543.5016446/94‑1 (MQ=60)
                       AGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCC                                                                        >  SRR4302543.7894154/1‑94 (MQ=60)
                       AGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCC                                                                        <  SRR4302543.4925805/94‑1 (MQ=60)
                        GTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCC                                                                       >  SRR4302543.7975098/1‑94 (MQ=60)
                         TATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCGGGCACAGATGACGCAACTCATCCCA                                                                      >  SRR4302543.3372439/1‑94 (MQ=60)
                         TATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCA                                                                      <  SRR4302543.2465124/94‑1 (MQ=60)
                          TTCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAG                                                                     <  SRR4302543.2438079/94‑1 (MQ=60)
                          ATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAG                                                                     <  SRR4302543.1788687/94‑1 (MQ=60)
                            CGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGAT                                                                   >  SRR4302543.3489560/1‑94 (MQ=60)
                             GCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATC                                                                  <  SRR4302543.5795763/94‑1 (MQ=60)
                              CGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCT                                                                 >  SRR4302543.1379390/1‑94 (MQ=60)
                              CGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCT                                                                 >  SRR4302543.1379389/1‑94 (MQ=60)
                                 CAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCT                                                              <  SRR4302543.2268194/94‑1 (MQ=60)
                                 CAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCT                                                              >  SRR4302543.2283470/1‑94 (MQ=60)
                                 CAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCT                                                              >  SRR4302543.7562167/1‑94 (MQ=60)
                                  AAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTG                                                             >  SRR4302543.6715902/1‑94 (MQ=60)
                                   AGGCCGCTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGG                                                            <  SRR4302543.1756660/94‑1 (MQ=60)
                                   AGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGG                                                            <  SRR4302543.5882266/94‑1 (MQ=60)
                                   AGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGG                                                            <  SRR4302543.6971549/94‑1 (MQ=60)
                                    GGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGG                                                           <  SRR4302543.3202060/94‑1 (MQ=60)
                                     GCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGT                                                          <  SRR4302543.2863166/94‑1 (MQ=60)
                                      CCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACNCANNTCATCCCAGATNTCNTNGNTG                                                         >  SRR4302543.492644/1‑94 (MQ=60)
                                       CACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGT                                                        <  SRR4302543.6033540/94‑1 (MQ=60)
                                       CACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGT                                                        >  SRR4302543.5943141/1‑94 (MQ=60)
                                       CACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGT                                                        <  SRR4302543.3961857/94‑1 (MQ=60)
                                        ACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTT                                                       >  SRR4302543.5266341/1‑94 (MQ=60)
                                        ACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTT                                                       <  SRR4302543.5822263/94‑1 (MQ=60)
                                        ACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTT                                                       >  SRR4302543.2195754/1‑94 (MQ=60)
                                        ACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGCGTT                                                       >  SRR4302543.5764137/1‑94 (MQ=60)
                                         CTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCATCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTG                                                      >  SRR4302543.6021775/1‑94 (MQ=60)
                                         CTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTG                                                      <  SRR4302543.5473570/94‑1 (MQ=60)
                                          TGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGT                                                     >  SRR4302543.5442945/1‑94 (MQ=60)
                                           GAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTT                                                    <  SRR4302543.2799030/94‑1 (MQ=60)
                                            AATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTG                                                   >  SRR4302543.901225/1‑94 (MQ=60)
                                            AATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTG                                                   <  SRR4302543.6182872/94‑1 (MQ=60)
                                            AATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTG                                                   <  SRR4302543.4324234/94‑1 (MQ=60)
                                            AATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGCTGTTG                                                   >  SRR4302543.2529010/1‑94 (MQ=60)
                                             ATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTTCTGGGTGTTGTTGT                                                  >  SRR4302543.5987714/1‑94 (MQ=60)
                                             ATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGT                                                  >  SRR4302543.5987713/1‑94 (MQ=60)
                                             ATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGT                                                  <  SRR4302543.7974052/94‑1 (MQ=60)
                                              TGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCCCCTGGGTGTTGTTGTA                                                 <  SRR4302543.7814212/94‑1 (MQ=60)
                                                AAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGT                                               <  SRR4302543.1881797/94‑1 (MQ=60)
                                                AAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGT                                               >  SRR4302543.7611221/1‑94 (MQ=60)
                                                 AGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTG                                              >  SRR4302543.6787510/1‑94 (MQ=60)
                                                  GCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGC                                             <  SRR4302543.1175940/94‑1 (MQ=60)
                                                   CCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCA                                            >  SRR4302543.5201279/1‑94 (MQ=60)
                                                   CCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCA                                            >  SRR4302543.2751598/1‑94 (MQ=60)
                                                     CAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATC                                          <  SRR4302543.4033302/94‑1 (MQ=60)
                                                      AGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCG                                         >  SRR4302543.4134312/1‑94 (MQ=60)
                                                      AGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCG                                         >  SRR4302543.3089235/1‑94 (MQ=60)
                                                      AGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCG                                         >  SRR4302543.3102848/1‑94 (MQ=60)
                                                       GTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGG                                        >  SRR4302543.6106557/1‑94 (MQ=60)
                                                       GTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGG                                        >  SRR4302543.546856/1‑94 (MQ=60)
                                                       GTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGG                                        >  SRR4302543.6193171/1‑94 (MQ=60)
                                                        TTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGA                                       <  SRR4302543.5288069/94‑1 (MQ=60)
                                                        TTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGA                                       <  SRR4302543.5636473/94‑1 (MQ=60)
                                                         TCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGAT                                      <  SRR4302543.3574999/94‑1 (MQ=60)
                                                          CGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATA                                     <  SRR4302543.6462523/94‑1 (MQ=60)
                                                          CGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATA                                     >  SRR4302543.2660507/1‑94 (MQ=60)
                                                           GCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAA                                    >  SRR4302543.4505721/1‑94 (MQ=60)
                                                           GCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAA                                    <  SRR4302543.345533/94‑1 (MQ=60)
                                                            CCCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAAC                                   >  SRR4302543.5842686/1‑94 (MQ=60)
                                                             CCATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACC                                  >  SRR4302543.3843237/1‑94 (MQ=60)
                                                              CATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCC                                 <  SRR4302543.3674759/94‑1 (MQ=60)
                                                              CATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCC                                 >  SRR4302543.7750258/1‑94 (MQ=60)
                                                               ATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCA                                >  SRR4302543.7038242/1‑94 (MQ=60)
                                                               ATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCA                                >  SRR4302543.3702475/1‑94 (MQ=60)
                                                               ATTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCA                                >  SRR4302543.6528036/1‑94 (MQ=60)
                                                                TTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCAT                               <  SRR4302543.3782528/94‑1 (MQ=60)
                                                                TTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCAT                               <  SRR4302543.1988819/94‑1 (MQ=60)
                                                                TTTTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCAT                               <  SRR4302543.2616927/94‑1 (MQ=60)
                                                                  TTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATAT                             <  SRR4302543.5362161/94‑1 (MQ=60)
                                                                  TTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATAC                             >  SRR4302543.6603488/1‑94 (MQ=60)
                                                                  TTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATAC                             <  SRR4302543.5925017/94‑1 (MQ=60)
                                                                  TTCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATAC                             <  SRR4302543.5217285/94‑1 (MQ=60)
                                                                   TCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACG                            <  SRR4302543.4765969/94‑1 (MQ=60)
                                                                   TCTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACG                            <  SRR4302543.7564269/94‑1 (MQ=60)
                                                                    CTCGTAAGTCGCACCGTAGAAATCCGGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGG                           <  SRR4302543.6768842/94‑1 (MQ=60)
                                                                    CTCGTAAGTCGCACCGTAGAAATCCAGGCATAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGG                           <  SRR4302543.990308/94‑1 (MQ=60)
                                                                    CTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGG                           >  SRR4302543.4599443/1‑94 (MQ=60)
                                                                    CTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGG                           >  SRR4302543.1008175/1‑94 (MQ=60)
                                                                    CTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGG                           >  SRR4302543.132792/1‑94 (MQ=60)
                                                                    CTCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGG                           <  SRR4302543.7946410/94‑1 (MQ=60)
                                                                     TCGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGG                          <  SRR4302543.7220380/94‑1 (MQ=60)
                                                                      CGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGT                         <  SRR4302543.2370552/94‑1 (MQ=60)
                                                                      CGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGT                         <  SRR4302543.5825771/94‑1 (MQ=60)
                                                                      CGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGT                         >  SRR4302543.6167313/1‑94 (MQ=60)
                                                                      CGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGT                         <  SRR4302543.4355856/94‑1 (MQ=60)
                                                                      CGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGT                         <  SRR4302543.938846/94‑1 (MQ=60)
                                                                      CGTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGT                         <  SRR4302543.6331667/94‑1 (MQ=60)
                                                                       GTAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTG                        <  SRR4302543.2576637/94‑1 (MQ=60)
                                                                        TAAGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGG                       <  SRR4302543.1216877/94‑1 (MQ=60)
                                                                          AGTCGCACCGTAGAAATCCAGGCACAGCTGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCG                     >  SRR4302543.5009524/1‑94 (MQ=60)
                                                                          AGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCG                     >  SRR4302543.5009523/1‑94 (MQ=60)
                                                                          AGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCG                     >  SRR4302543.7102104/1‑94 (MQ=60)
                                                                          AGTCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCG                     >  SRR4302543.5529460/1‑94 (MQ=60)
                                                                            TCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGAT                   >  SRR4302543.5304663/1‑94 (MQ=60)
                                                                            TCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGAT                   <  SRR4302543.7758592/94‑1 (MQ=60)
                                                                            TCGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGAT                   >  SRR4302543.5926362/1‑94 (MQ=60)
                                                                             CGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATT                  >  SRR4302543.1326415/1‑94 (MQ=60)
                                                                             CGCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGCGGCGATT                  >  SRR4302543.5575088/1‑94 (MQ=60)
                                                                              GCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTT                 >  SRR4302543.3504589/1‑94 (MQ=60)
                                                                              GCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTT                 <  SRR4302543.4338785/94‑1 (MQ=60)
                                                                              GCACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTT                 <  SRR4302543.7473224/94‑1 (MQ=60)
                                                                               CACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTC                <  SRR4302543.6991198/94‑1 (MQ=60)
                                                                                CCCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCA               <  SRR4302543.2518740/94‑1 (MQ=60)
                                                                                ACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCA               >  SRR4302543.3469240/1‑94 (MQ=60)
                                                                                ACCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCA               >  SRR4302543.5536053/1‑94 (MQ=60)
                                                                                 CCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCAC              >  SRR4302543.2306781/1‑94 (MQ=60)
                                                                                 CCGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCAC              <  SRR4302543.1643179/94‑1 (MQ=60)
                                                                                  CGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTATTGCATCGGATAACCCATACGGGTGGCGATTTCACT             >  SRR4302543.6062983/1‑94 (MQ=60)
                                                                                  CGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACT             <  SRR4302543.5063940/94‑1 (MQ=60)
                                                                                  CGTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACG             >  SRR4302543.6062984/1‑94 (MQ=60)
                                                                                   GTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTG            >  SRR4302543.3783590/1‑94 (MQ=60)
                                                                                   GTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTG            <  SRR4302543.6599433/94‑1 (MQ=60)
                                                                                   GTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTG            >  SRR4302543.7517195/1‑94 (MQ=60)
                                                                                   GTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTG            <  SRR4302543.6599432/94‑1 (MQ=60)
                                                                                   GTAGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTG            >  SRR4302543.6614051/1‑94 (MQ=60)
                                                                                     AGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGAT          <  SRR4302543.5366361/94‑1 (MQ=60)
                                                                                     AGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGAT          >  SRR4302543.5445787/1‑94 (MQ=60)
                                                                                     AGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGAT          <  SRR4302543.805351/94‑1 (MQ=60)
                                                                                     AGAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGAT          >  SRR4302543.7765976/1‑94 (MQ=60)
                                                                                      GAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATG         <  SRR4302543.3761404/94‑1 (MQ=60)
                                                                                      GAAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATG         <  SRR4302543.5852845/94‑1 (MQ=60)
                                                                                       AAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGA        <  SRR4302543.5035720/94‑1 (MQ=60)
                                                                                       AAATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGA        >  SRR4302543.289342/1‑94 (MQ=60)
                                                                                        AATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGAT       >  SRR4302543.6900639/1‑94 (MQ=60)
                                                                                        AATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGAT       >  SRR4302543.1581590/1‑94 (MQ=60)
                                                                                        AATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGAT       <  SRR4302543.3599563/94‑1 (MQ=60)
                                                                                        AATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGAT       <  SRR4302543.1305651/94‑1 (MQ=60)
                                                                                         ATCCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGATT      >  SRR4302543.3251097/1‑94 (MQ=60)
                                                                                         ATCCAGGCACAGATGACGCAACTCAGCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGATT      <  SRR4302543.1417739/94‑1 (MQ=60)
                                                                                           CCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGATTTG    >  SRR4302543.6951836/1‑94 (MQ=60)
                                                                                           CCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGATTTG    <  SRR4302543.1041162/94‑1 (MQ=60)
                                                                                           CCAGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGATTTC    >  SRR4302543.6888807/1‑94 (MQ=60)
                                                                                             AGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACACATACGGGTGGCGATTTCACTGATGATTTGCC  >  SRR4302543.1324801/1‑94 (MQ=60)
                                                                                             |                                                                                             
GAAGTCCCCTGATCGGCATCTGAAGTATCGCGGCAAGGCCACTGAATGAAGCCCAGTTCGCCCATTTTCTCGTAAGTCGCACCGTAGAAATCCGGGCACAGATGACGCAACTCATCCCAGATCTCCTGGGTGTTGTTGTAGTGCATCGGATAACCCATACGGGTGGCGATTTCACTGATGATTTGCC  >  NC_000913/4295324‑4295510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑