Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,366,832	T→C	M387V (ATG→GTG)	yjeH ←	putative transport

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,366,832	0	T	C	100.0%	993.9 / NA	314	M387V (ATG→GTG)	yjeH	putative transport
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (173/141); total (173/141)

Only 100 of 323 total aligned reads displayed.

TTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCATTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATA  >  NC_000913/4366742‑4366921

  aTGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGcc                                                                                       >  1:1687849/1‑93 (MQ=255)

  aTGCCATTTTCCGGCGTTTTTCGTGTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGcc                                                                                       >  2:7589102/1‑93 (MQ=255)

   tGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCa                                                                                      <  1:75168/93‑1 (MQ=255)

     ccATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGt                                                                                    >  2:5462806/1‑93 (MQ=255)

      cATTTCCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTa                                                                                   <  2:2285472/93‑1 (MQ=255)

       aTTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTaa                                                                                  <  1:5757971/93‑1 (MQ=255)

        ttttCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAAc                                                                                 >  2:2907801/1‑93 (MQ=255)

        ttttCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAAc                                                                                 >  2:20148/1‑93 (MQ=255)

        ttttCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAAc                                                                                 >  2:1327633/1‑93 (MQ=255)

           tCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGa                                                                              >  1:7218266/1‑93 (MQ=255)

            ccGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGaa                                                                             <  1:530824/93‑1 (MQ=255)

            ccGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGaa                                                                             >  1:6834602/1‑93 (MQ=255)

             cGGTGTTTTTCGTTGTGGCAGCAACAGCCATACCGCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAAc                                                                            <  2:1223460/93‑1 (MQ=255)

             cGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAAc                                                                            <  1:1069605/93‑1 (MQ=255)

               gCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGc                                                                          >  2:2412489/1‑93 (MQ=255)

               gCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGc                                                                          >  1:2065488/1‑93 (MQ=255)

                gttttttCGTTTGGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCa                                                                         <  1:3935754/91‑1 (MQ=255)

                cGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCa                                                                         <  1:1925302/93‑1 (MQ=255)

                 gTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCAt                                                                        >  2:3240184/1‑93 (MQ=255)

                  tttttCGTTTTGGCAGCAACAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATa                                                                       <  1:4131463/93‑1 (MQ=255)

                  tttttCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGATCACTGCCAGTAACAGAACGCATa                                                                       >  2:4295821/1‑93 (MQ=255)

                  tttttCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATa                                                                       >  1:5547855/1‑93 (MQ=255)

                  tttttCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATa                                                                       >  2:1562145/1‑93 (MQ=255)

                  tttttCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATa                                                                       >  2:3870885/1‑93 (MQ=255)

                   ttttCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATaa                                                                      >  1:3823083/1‑93 (MQ=255)

                   ttttCGTTTAGGCAGCAACAGCGATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCCCTGCCAGTAACAGAACGCATaa                                                                      <  1:6893380/93‑1 (MQ=255)

                    tttCGTTTTGGCAGCAACAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAAc                                                                     <  1:5182789/93‑1 (MQ=255)

                      tCGTTTTGGCAGCAACAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAg                                                                   <  2:3090201/93‑1 (MQ=255)

                      tCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAg                                                                   >  2:7359809/1‑93 (MQ=255)

                        gTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGcc                                                                 >  2:2983090/1‑93 (MQ=255)

                         ttttGGCAGCAACAGCCATAGCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGccc                                                                <  2:5243493/93‑1 (MQ=255)

                         ttttGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGccc                                                                >  1:1212759/1‑93 (MQ=255)

                          tttGGCAACACCAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCg                                                               <  1:6257135/93‑1 (MQ=255)

                            tGGCAGCACCAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGcc                                                             <  2:650476/93‑1 (MQ=255)

                               cagcaACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAac                                                          <  1:2256143/93‑1 (MQ=255)

                                agcaACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAacc                                                         >  1:7721301/1‑93 (MQ=255)

                                 gcaACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAacca                                                        >  2:7630084/1‑93 (MQ=255)

                                 gcaACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAacca                                                        >  1:1859218/1‑93 (MQ=255)

                                    aCAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAaccaccc                                                     >  1:4793506/1‑92 (MQ=255)

                                       gCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCa                                                  >  1:7338314/1‑93 (MQ=255)

                                          ctAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCagta                                               <  1:953379/92‑1 (MQ=255)

                                           tacccccGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCagtag                                              <  2:6029242/90‑1 (MQ=255)

                                             aCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTc                                            >  2:2798663/1‑93 (MQ=255)

                                                  gCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATaa                                       <  2:2502622/93‑1 (MQ=255)

                                                  gCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATaa                                       >  2:6684886/1‑93 (MQ=255)

                                                  gCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATaa                                       <  1:802166/93‑1 (MQ=255)

                                                   ccAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATaag                                      >  2:5134531/1‑92 (MQ=255)

                                                   ccAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAAc                                      <  2:3595196/93‑1 (MQ=255)

                                                   ccAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAAc                                      >  2:6320885/1‑93 (MQ=255)

                                                     aGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGt                                    >  1:1614398/1‑93 (MQ=255)

                                                     aGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGt                                    >  1:2899972/1‑93 (MQ=255)

                                                     aGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCACGCCAACCACCGCCAGTAGTCGATAACGt                                    >  1:6135147/1‑93 (MQ=255)

                                                      gCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTc                                   >  2:6586022/1‑93 (MQ=255)

                                                      gCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCACCAACCACCGCCAGTAGTCGATAACGTc                                   >  1:6621801/1‑93 (MQ=255)

                                                        aTGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCt                                 <  1:6770998/93‑1 (MQ=255)

                                                        aTGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCt                                 >  1:6469424/1‑93 (MQ=255)

                                                        aTGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCt                                 <  2:5307388/93‑1 (MQ=255)

                                                        aTGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCt                                 >  2:5770123/1‑93 (MQ=255)

                                                        aTGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCt                                 <  2:4051293/93‑1 (MQ=255)

                                                         tGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCtt                                >  1:3323896/1‑93 (MQ=255)

                                                         tGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCtt                                >  2:5947579/1‑93 (MQ=255)

                                                         tGATCAGCACATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCtt                                <  2:3346683/93‑1 (MQ=255)

                                                          gATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTg                               >  2:2750345/1‑93 (MQ=255)

                                                          gATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTg                               >  2:2679870/1‑93 (MQ=255)

                                                          gATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTg                               <  1:5926242/93‑1 (MQ=255)

                                                            tCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCa                             >  2:6120880/1‑93 (MQ=255)

                                                             cAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCaa                            <  1:322870/93‑1 (MQ=255)

                                                             cAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCaa                            <  1:2656791/93‑1 (MQ=255)

                                                               gcgcATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCaata                          >  1:2816104/1‑93 (MQ=255)

                                                                cgcATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCaataa                         <  2:6167311/93‑1 (MQ=255)

                                                                   aTAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAAttt                      >  1:2433820/1‑93 (MQ=255)

                                                                   aTAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAAttt                      >  1:1433167/1‑93 (MQ=255)

                                                                    tAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATCACGTCCTTGCAATAATTTa                     <  1:7016035/93‑1 (MQ=255)

                                                                     agagCCTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTAc                    <  1:2871776/93‑1 (MQ=255)

                                                                     agagACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTaa                    >  1:5828690/1‑92 (MQ=255)

                                                                     agagACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTAc                    >  2:790363/1‑93 (MQ=255)

                                                                     agagACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTAc                    <  1:3038800/93‑1 (MQ=255)

                                                                     agagACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTAc                    <  1:4432853/93‑1 (MQ=255)

                                                                      gagcCTTTCCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGAAATAATTTACa                   <  2:7248011/93‑1 (MQ=255)

                                                                      gagaCTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACa                   >  1:4522954/1‑93 (MQ=255)

                                                                       agaCTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACac                  >  1:6367529/1‑92 (MQ=255)

                                                                           ttttCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTg              >  1:5450101/1‑93 (MQ=255)

                                                                           ttttCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTg              <  2:4666124/93‑1 (MQ=255)

                                                                           tttcCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTg              <  2:5573116/93‑1 (MQ=255)

                                                                            tttCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGc             >  1:5075987/1‑93 (MQ=255)

                                                                            tttCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGc             >  2:7828421/1‑93 (MQ=255)

                                                                              tCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCa           <  2:5105388/93‑1 (MQ=255)

                                                                                cAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgc         >  1:4651116/1‑93 (MQ=255)

                                                                                cAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgc         >  1:3612030/1‑93 (MQ=255)

                                                                                 aGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgca        >  2:1022589/1‑93 (MQ=255)

                                                                                 aGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgca        <  2:7774918/93‑1 (MQ=255)

                                                                                  gCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcat       <  2:2122394/93‑1 (MQ=255)

                                                                                   ccGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcatg      <  1:3152957/93‑1 (MQ=255)

                                                                                     gACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcatgca    <  2:4806594/93‑1 (MQ=255)

                                                                                     caCCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcatgca    <  2:4540409/92‑1 (MQ=255)

                                                                                      aCCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAgcatgcat   >  1:4361643/1‑93 (MQ=255)

                                                                                       ccACTGCCAGTAACAGAACGCATCACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATa  <  2:5414522/93‑1 (MQ=255)

                                                                                       ccACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATa  <  2:7181895/93‑1 (MQ=255)

                                                                                       ccACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATa  <  2:6937601/93‑1 (MQ=255)

                                                                                       ccACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATa  <  2:6789235/93‑1 (MQ=255)

TTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCATTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATA  >  NC_000913/4366742‑4366921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCATTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAACAG  >  NC_000913/4366739‑4366925

tctccactctATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCAC                                                                                               <  SRR4302543.6920410/84‑1 (MQ=60)

TGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGCTCAGCGCATAGAGACTTTTCCCGCCGACCAC                                                                                               >  SRR4302543.2858918/1‑94 (MQ=60)

TGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCAC                                                                                               <  SRR4302543.697303/94‑1 (MQ=60)

TGGGTATGCCATTTGCCGGCGTGTTTCGGTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCAC                                                                                               <  SRR4302543.6499012/94‑1 (MQ=60)

GGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCAC                                                                                               <  SRR4302543.1861692/94‑1 (MQ=60)

 GGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACT                                                                                              <  SRR4302543.1117030/94‑1 (MQ=60)

 GGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACT                                                                                              >  SRR4302543.2928073/1‑94 (MQ=60)

 GGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACT                                                                                              >  SRR4302543.1998975/1‑94 (MQ=60)

  GTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTG                                                                                             >  SRR4302543.6854626/1‑94 (MQ=60)

   TTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGC                                                                                            >  SRR4302543.5026518/1‑94 (MQ=60)

   TTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGC                                                                                            <  SRR4302543.3010950/94‑1 (MQ=60)

    TATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCC                                                                                           >  SRR4302543.1703006/1‑94 (MQ=60)

      TGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAG                                                                                         <  SRR4302543.75861/94‑1 (MQ=60)

      TGCCACTTTCCAGCGTTTTTCGTTTTGGCAACAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGACGACCACTGCCAG                                                                                         <  SRR4302543.5560780/94‑1 (MQ=60)

        CCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTA                                                                                       >  SRR4302543.6242610/1‑94 (MQ=60)

        CCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTA                                                                                       >  SRR4302543.6108754/1‑94 (MQ=60)

        CCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTA                                                                                       >  SRR4302543.6792930/1‑94 (MQ=60)

         CATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAA                                                                                      <  SRR4302543.5060601/94‑1 (MQ=60)

         CATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAA                                                                                      >  SRR4302543.4600821/1‑94 (MQ=60)

          ATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAAC                                                                                     >  SRR4302543.3515095/1‑94 (MQ=60)

          ATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAAC                                                                                     <  SRR4302543.5810436/94‑1 (MQ=60)

          ATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAAC                                                                                     >  SRR4302543.2903927/1‑94 (MQ=60)

          ATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAAC                                                                                     >  SRR4302543.5703684/1‑94 (MQ=60)

          ATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAAC                                                                                     >  SRR4302543.6006684/1‑94 (MQ=60)

          ATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAAC                                                                                     <  SRR4302543.6912317/94‑1 (MQ=60)

          ATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTACCAGTAAC                                                                                     >  SRR4302543.4069233/1‑94 (MQ=60)

             TTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGA                                                                                  >  SRR4302543.4216921/1‑94 (MQ=60)

             TTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGA                                                                                  >  SRR4302543.7288231/1‑94 (MQ=60)

             TTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGA                                                                                  <  SRR4302543.7643597/94‑1 (MQ=60)

              TCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAA                                                                                 >  SRR4302543.6899123/1‑94 (MQ=60)

               CCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAAC                                                                                <  SRR4302543.535738/94‑1 (MQ=60)

               CCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAAC                                                                                <  SRR4302543.535739/94‑1 (MQ=60)

               CCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAAC                                                                                <  SRR4302543.995629/94‑1 (MQ=60)

               CCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTGTTCCAGCCGACCACTGCCAGTCACAGAAC                                                                                >  SRR4302543.5434714/1‑94 (MQ=60)

                CGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGATACTTTTCCAGCCGACCACTGCCAGTAACAGAACG                                                                               >  SRR4302543.1336981/1‑94 (MQ=60)

                CGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACG                                                                               <  SRR4302543.1079220/94‑1 (MQ=60)

                 GGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGC                                                                              >  SRR4302543.2083957/1‑94 (MQ=60)

                   gtTTTTTCGTTTGGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCAT                                                                            <  SRR4302543.3970527/92‑1 (MQ=60)

                   CGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCAT                                                                            <  SRR4302543.1942651/94‑1 (MQ=60)

                   CGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCAT                                                                            <  SRR4302543.3970526/94‑1 (MQ=60)

                    GTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATA                                                                           >  SRR4302543.5598308/1‑94 (MQ=60)

                    GTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATA                                                                           <  SRR4302543.3361043/94‑1 (MQ=60)

                    GTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATA                                                                           >  SRR4302543.3176372/1‑94 (MQ=60)

                    GTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCAGACCACTGCCAGTAACAGAACGCATA                                                                           >  SRR4302543.2098299/1‑94 (MQ=60)

                     TTTTTCGTTTTGGCAGCAACAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAA                                                                          <  SRR4302543.4168725/94‑1 (MQ=60)

                     TTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAA                                                                          >  SRR4302543.3856803/1‑94 (MQ=60)

                      TTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAAC                                                                         >  SRR4302543.18989/1‑94 (MQ=60)

                      TTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAAC                                                                         >  SRR4302543.6731473/1‑94 (MQ=60)

                      TTTTCGTTTAGGCAGCAACAGCGATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCCCTGCCAGTAACAGAACGCATAAC                                                                         <  SRR4302543.6958181/94‑1 (MQ=60)

                      TTTTCGGTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAAC                                                                         <  SRR4302543.6958182/94‑1 (MQ=60)

                       TTTCGTTTTGGCAGCAACAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACA                                                                        <  SRR4302543.5229558/94‑1 (MQ=60)

                       TTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACA                                                                        <  SRR4302543.2045226/94‑1 (MQ=60)

                       TTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACA                                                                        >  SRR4302543.894259/1‑94 (MQ=60)

                        tctGTTTTGCCAGCAACAGCCAAAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAG                                                                       <  SRR4302543.1845232/91‑1 (MQ=60)

                         TCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGC                                                                      >  SRR4302543.6699919/1‑94 (MQ=60)

                          CGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGCATTTTCCAGCCGACCAGTGCCAGTAACAACACGCATAACAGCC                                                                     >  SRR4302543.6410033/1‑94 (MQ=60)

                          CGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCC                                                                     >  SRR4302543.5147038/1‑94 (MQ=60)

                           GTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCC                                                                    >  SRR4302543.7330326/1‑94 (MQ=60)

                           GTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCC                                                                    >  SRR4302543.7299274/1‑94 (MQ=60)

                           GTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCC                                                                    >  SRR4302543.1223665/1‑94 (MQ=60)

                           GTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCC                                                                    >  SRR4302543.7194289/1‑94 (MQ=60)

                           GTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCC                                                                    >  SRR4302543.1223662/1‑94 (MQ=60)

                             TTTGGCAACACCAGCCATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGC                                                                  <  SRR4302543.6316154/94‑1 (MQ=60)

                               TGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCA                                                                >  SRR4302543.4935833/1‑94 (MQ=60)

                                  CAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACC                                                             >  SRR4302543.7794309/1‑94 (MQ=60)

                                  CAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACC                                                             <  SRR4302543.6527230/94‑1 (MQ=60)

                                  CAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACC                                                             <  SRR4302543.2276675/94‑1 (MQ=60)

                                   AGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCA                                                            >  SRR4302543.6929344/1‑94 (MQ=60)

                                   AGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCA                                                            >  SRR4302543.1875924/1‑94 (MQ=60)

                                    GCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCAC                                                           >  SRR4302543.4534334/1‑94 (MQ=60)

                                    GCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCAC                                                           <  SRR4302543.4247626/94‑1 (MQ=60)

                                      AACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCTAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCcccc                                                         >  SRR4302543.4465799/1‑90 (MQ=60)

                                      AACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCG                                                         >  SRR4302543.80772/1‑94 (MQ=60)

                                      AACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCG                                                         >  SRR4302543.2750765/1‑94 (MQ=60)

                                      AACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCC                                                         >  SRR4302543.2750766/1‑94 (MQ=60)

                                      AACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCC                                                         >  SRR4302543.4837319/1‑94 (MQ=60)

                                         AGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCA                                                      >  SRR4302543.1672597/1‑94 (MQ=60)

                                         AGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCA                                                      >  SRR4302543.7408909/1‑94 (MQ=60)

                                          GCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAG                                                     >  SRR4302543.2330738/1‑94 (MQ=60)

                                           CCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGT                                                    >  SRR4302543.4329385/1‑94 (MQ=60)

                                            CATACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTA                                                   <  SRR4302543.5829861/94‑1 (MQ=60)

                                            CATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTA                                                   >  SRR4302543.3262948/1‑94 (MQ=60)

                                            CATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTA                                                   >  SRR4302543.1654524/1‑94 (MQ=60)

                                            CATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTA                                                   <  SRR4302543.2895445/94‑1 (MQ=60)

                                             CTAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAG                                                  <  SRR4302543.961732/94‑1 (MQ=60)

                                              TAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGT                                                 <  SRR4302543.7065504/94‑1 (MQ=60)

                                               ACCCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTC                                                <  SRR4302543.2903153/94‑1 (MQ=60)

                                                  CCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGAT                                             >  SRR4302543.2929326/1‑94 (MQ=60)

                                                  CCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGAT                                             <  SRR4302543.6322093/94‑1 (MQ=60)

                                                  CCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGAT                                             <  SRR4302543.8008264/94‑1 (MQ=60)

                                                   CCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATA                                            >  SRR4302543.7432975/1‑94 (MQ=60)

                                                     GCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAAC                                          >  SRR4302543.7263162/1‑94 (MQ=60)

                                                     GCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAAC                                          <  SRR4302543.1979329/94‑1 (MQ=60)

                                                     GCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAAC                                          <  SRR4302543.809220/94‑1 (MQ=60)

                                                       CAGCATGATCAGCGCATAGAGACTTTTCCAGCCGGCCACTGCCGGTAACAGAACGCATACCAGCCCGCCAACCACCGCCAGTAGTCGATAACGT                                        <  SRR4302543.1094934/94‑1 (MQ=60)

                                                       CAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGT                                        >  SRR4302543.2926339/1‑94 (MQ=60)

                                                       CAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGT                                        >  SRR4302543.2926340/1‑94 (MQ=60)

                                                       CAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGT                                        >  SRR4302543.1628793/1‑94 (MQ=60)

                                                       CAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCACGCCAACCACCGCCAGTAGTCGATAACGT                                        >  SRR4302543.6193263/1‑94 (MQ=60)

                                                        AGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTC                                       >  SRR4302543.4533087/1‑94 (MQ=60)

                                                        AGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTC                                       >  SRR4302543.4062635/1‑94 (MQ=60)

                                                        AGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTC                                       <  SRR4302543.1876852/94‑1 (MQ=60)

                                                        AGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCACCAACCACCGCCAGTAGTCGATAACGTC                                       >  SRR4302543.6684249/1‑94 (MQ=60)

                                                         GCATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCC                                      >  SRR4302543.857884/1‑94 (MQ=60)

                                                          CATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCT                                     <  SRR4302543.5291989/94‑1 (MQ=60)

                                                          CATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCT                                     >  SRR4302543.6530373/1‑94 (MQ=60)

                                                          CATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCT                                     >  SRR4302543.5934557/1‑94 (MQ=60)

                                                           ATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTT                                    >  SRR4302543.7997707/1‑94 (MQ=60)

                                                           ATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTT                                    <  SRR4302543.6834955/94‑1 (MQ=60)

                                                           ATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTT                                    <  SRR4302543.1771171/94‑1 (MQ=60)

                                                           ATGATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTT                                    >  SRR4302543.3353879/1‑94 (MQ=60)

                                                             GATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGC                                  <  SRR4302543.5980411/94‑1 (MQ=60)

                                                             GATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGC                                  >  SRR4302543.3767860/1‑94 (MQ=60)

                                                              ATCAGCGCTTAAAGACTTTTCCAGCCGAACACTGCCAGTAACAGAACTCATAACCGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCA                                 <  SRR4302543.1775903/94‑1 (MQ=60)

                                                              ATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCA                                 >  SRR4302543.5906133/1‑94 (MQ=60)

                                                              ATCAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCA                                 >  SRR4302543.2526876/1‑94 (MQ=60)

                                                                CAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAAT                               <  SRR4302543.2680876/94‑1 (MQ=60)

                                                                CAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAAT                               <  SRR4302543.7529627/94‑1 (MQ=60)

                                                                CAGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAAT                               <  SRR4302543.325792/94‑1 (MQ=60)

                                                                 AGCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATA                              >  SRR4302543.2841890/1‑94 (MQ=60)

                                                                  GCGCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAA                             >  SRR4302543.7258254/1‑94 (MQ=60)

                                                                  GCGCATAGAGACTGTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAA                             <  SRR4302543.3165454/94‑1 (MQ=60)

                                                                   CGCATACAGACTTTTCCAGCCGACCACTGCAAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAAT                            <  SRR4302543.2234880/94‑1 (MQ=60)

                                                                    GCATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATT                           >  SRR4302543.7761625/1‑94 (MQ=60)

                                                                     CATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTT                          >  SRR4302543.1446127/1‑94 (MQ=60)

                                                                     CATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTT                          >  SRR4302543.2455782/1‑94 (MQ=60)

                                                                     CATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTT                          <  SRR4302543.6464107/94‑1 (MQ=60)

                                                                     CATAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTT                          <  SRR4302543.5763536/94‑1 (MQ=60)

                                                                       TAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATCACGTCCTTGCAATAATTTAC                        <  SRR4302543.7083060/94‑1 (MQ=60)

                                                                       TAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTAC                        <  SRR4302543.6268956/94‑1 (MQ=60)

                                                                       TAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTAC                        <  SRR4302543.32477/94‑1 (MQ=60)

                                                                       TAGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTAA                        >  SRR4302543.5881699/1‑94 (MQ=60)

                                                                        AGAGCCTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACA                       <  SRR4302543.2897928/94‑1 (MQ=60)

                                                                        AGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACA                       <  SRR4302543.3066216/94‑1 (MQ=60)

                                                                        AGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACA                       >  SRR4302543.4564094/1‑94 (MQ=60)

                                                                        AGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACA                       <  SRR4302543.3467296/94‑1 (MQ=60)

                                                                        AGAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACA                       <  SRR4302543.4473006/94‑1 (MQ=60)

                                                                        AGAAACTTTTACAGCCGACAAATGCAAGTAACAGAACGAATAACAGCCGGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACA                       <  SRR4302543.4473005/94‑1 (MQ=60)

                                                                         GAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAG                      <  SRR4302543.4588325/94‑1 (MQ=60)

                                                                         GAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAG                      <  SRR4302543.145738/94‑1 (MQ=60)

                                                                         GAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAC                      >  SRR4302543.3276064/1‑94 (MQ=60)

                                                                         GAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAC                      >  SRR4302543.6427418/1‑94 (MQ=60)

                                                                         AAGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAG                      <  SRR4302543.6096250/94‑1 (MQ=60)

                                                                          AGACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGC                     >  SRR4302543.5547711/1‑94 (MQ=60)

                                                                           GACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCC                    <  SRR4302543.6638059/94‑1 (MQ=60)

                                                                            ACTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCT                   >  SRR4302543.4787748/1‑94 (MQ=60)

                                                                             CTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTG                  >  SRR4302543.1837283/1‑94 (MQ=60)

                                                                             CTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTG                  >  SRR4302543.3205416/1‑94 (MQ=60)

                                                                             CTTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTG                  >  SRR4302543.5499533/1‑94 (MQ=60)

                                                                              TTTTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGC                 >  SRR4302543.5122044/1‑94 (MQ=60)

                                                                                TTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCGTGCCA               >  SRR4302543.1510790/1‑94 (MQ=60)

                                                                                TTCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCA               <  SRR4302543.6836859/94‑1 (MQ=60)

                                                                                 TCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAG              >  SRR4302543.5164322/1‑94 (MQ=60)

                                                                                 TCCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAG              <  SRR4302543.2663323/94‑1 (MQ=60)

                                                                                  CCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGC             >  SRR4302543.4693450/1‑94 (MQ=60)

                                                                                  CCAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGC             >  SRR4302543.3643879/1‑94 (MQ=60)

                                                                                   CAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCA            >  SRR4302543.3744271/1‑94 (MQ=60)

                                                                                   CAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCA            <  SRR4302543.5588855/94‑1 (MQ=60)

                                                                                   CAGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCA            <  SRR4302543.5811169/94‑1 (MQ=60)

                                                                                    AGCCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCAT           <  SRR4302543.5295571/94‑1 (MQ=60)

                                                                                     GCCGACCCCTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATG          <  SRR4302543.2419345/94‑1 (MQ=60)

                                                                                      CCGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGC         <  SRR4302543.3181331/94‑1 (MQ=60)

                                                                                       CGACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCA        >  SRR4302543.6676708/1‑94 (MQ=60)

                                                                                        GACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCAT       >  SRR4302543.4764176/1‑94 (MQ=60)

                                                                                        GACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCAT       >  SRR4302543.141736/1‑94 (MQ=60)

                                                                                        GACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCAT       >  SRR4302543.4401158/1‑94 (MQ=60)

                                                                                        GACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCAT       >  SRR4302543.2856692/1‑94 (MQ=60)

                                                                                        GACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCAT       <  SRR4302543.3923218/94‑1 (MQ=60)

                                                                                        CACCACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCAT       <  SRR4302543.2292472/94‑1 (MQ=60)

                                                                                           CACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAAC    <  SRR4302543.7301592/94‑1 (MQ=60)

                                                                                           CACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAAC    <  SRR4302543.1990956/94‑1 (MQ=60)

                                                                                           CACTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAAC    >  SRR4302543.320583/1‑94 (MQ=60)

                                                                                             CTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAACAG  <  SRR4302543.4924685/94‑1 (MQ=60)

                                                                                             CTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAACAG  <  SRR4302543.4315745/94‑1 (MQ=60)

                                                                                             CTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAACAG  >  SRR4302543.963735/1‑94 (MQ=60)

                                                                                             CTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCCCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAACAG  >  SRR4302543.497360/1‑94 (MQ=60)

TGGTTATGCCATTTTCCGGCGTTTTTCGTTTTGGCAGCAACAGCCATAACCCCGCCAGCATGATCAGCGCATAGAGACTTTTCCAGCCGACCATTGCCAGTAACAGAACGCATAACAGCCCGCCAACCACCGCCAGTAGTCGATAACGTCCTTGCAATAATTTACAGCCTGCCAGCATGCATAACAG  >  NC_000913/4366739‑4366925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`