Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,395,292 T→A S101R (AGT→AGA)  mutL → MutL

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,395,2920TA100.0% 1322.6 / NA 369S101R (AGT→AGA) mutLMutL
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (179/190);  total (179/190)

Only 100 of 379 total aligned reads displayed.

CTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAA  >  NC_000913/4395203‑4395381
                                                                                         |                                                                                         
ctggcTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATc                                                                                        <  1:1070391/93‑1 (MQ=255)
 tggcTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCa                                                                                       <  2:875394/93‑1 (MQ=255)
    cccGTCATGCCACCAGTAAAATCGCCTCTCTGGACGAGCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGtt                                                                                    <  1:3004468/91‑1 (MQ=255)
     tCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTc                                                                                   >  1:891592/1‑93 (MQ=255)
     tCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTc                                                                                   <  1:4212756/93‑1 (MQ=255)
      cGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCg                                                                                  <  2:3023795/93‑1 (MQ=255)
       gTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCgg                                                                                 >  2:2110300/1‑93 (MQ=255)
       gTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCgg                                                                                 >  2:6817943/1‑93 (MQ=255)
         cATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGtt                                                                               <  2:4006149/93‑1 (MQ=255)
         cATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGtt                                                                               >  1:7097811/1‑93 (MQ=255)
         cATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGtt                                                                               <  1:5260612/93‑1 (MQ=255)
         cATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGtt                                                                               <  1:2507694/93‑1 (MQ=255)
         cATCCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGtt                                                                               <  2:2778864/93‑1 (MQ=255)
          aTGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGttt                                                                              >  2:1998803/1‑93 (MQ=255)
           tGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTc                                                                             >  1:4120290/1‑93 (MQ=255)
            gCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTcc                                                                            >  2:1640665/1‑93 (MQ=255)
             ccaccaGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTccc                                                                           >  1:4953215/1‑93 (MQ=255)
             ccaccaGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTccc                                                                           <  1:2811981/93‑1 (MQ=255)
              caccaGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCg                                                                          >  1:7605105/1‑93 (MQ=255)
                ccaGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGcc                                                                        <  1:986632/93‑1 (MQ=255)
                ccaGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGcc                                                                        >  1:1935572/1‑93 (MQ=255)
                 caGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCt                                                                       <  2:1983751/93‑1 (MQ=255)
                 caGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCt                                                                       >  2:2382217/1‑93 (MQ=255)
                 caGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCt                                                                       >  2:3346182/1‑93 (MQ=255)
                  aGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTg                                                                      >  1:3659587/1‑93 (MQ=255)
                  aGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTg                                                                      >  1:6620308/1‑93 (MQ=255)
                  aGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTg                                                                      >  1:5686500/1‑93 (MQ=255)
                  aGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATGATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTg                                                                      >  2:7830708/1‑93 (MQ=255)
                   gTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGa                                                                     >  1:1353795/1‑93 (MQ=255)
                   gTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGa                                                                     >  1:6424160/1‑93 (MQ=255)
                      aaaTCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGc                                                                  <  1:3136873/93‑1 (MQ=255)
                      aaaTCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGc                                                                  <  2:394471/93‑1 (MQ=255)
                       aaTCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCt                                                                 <  2:618325/93‑1 (MQ=255)
                        aTCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTc                                                                <  2:7645699/93‑1 (MQ=255)
                          cGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCAc                                                              <  1:5366058/93‑1 (MQ=255)
                          cGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCAc                                                              <  2:4861555/93‑1 (MQ=255)
                           gCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACt                                                             <  1:7690132/93‑1 (MQ=255)
                           gCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACt                                                             >  1:473762/1‑93 (MQ=255)
                            ccTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACtt                                                            <  1:1116979/93‑1 (MQ=255)
                             ctctctGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTc                                                           <  1:2257097/93‑1 (MQ=255)
                             ctctctGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTc                                                           >  2:7547985/1‑93 (MQ=255)
                              tctctGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCa                                                          <  2:7157304/93‑1 (MQ=255)
                              tctctGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCa                                                          >  1:7297460/1‑93 (MQ=255)
                               ctctGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCAc                                                         >  2:6287813/1‑93 (MQ=255)
                                tctGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACg                                                        >  1:267794/1‑93 (MQ=255)
                                tctGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACg                                                        <  1:242927/93‑1 (MQ=255)
                                 ctGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGc                                                       <  1:1803513/93‑1 (MQ=255)
                                  tGGACTATCTCGAATCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCa                                                      <  2:3494608/93‑1 (MQ=255)
                                  tGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCa                                                      <  2:1449687/93‑1 (MQ=255)
                                  tGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCa                                                      <  1:1854899/93‑1 (MQ=255)
                                   ggACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCAc                                                     >  2:4285874/1‑93 (MQ=255)
                                    gACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCAcc                                                    <  1:4007847/93‑1 (MQ=255)
                                    gACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCAcc                                                    <  2:4162000/93‑1 (MQ=255)
                                       gATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCa                                                 >  1:3865612/1‑93 (MQ=255)
                                       gATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCa                                                 <  2:2499919/93‑1 (MQ=255)
                                       gATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCa                                                 >  1:3496842/1‑93 (MQ=255)
                                       gATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCa                                                 >  1:1218180/1‑93 (MQ=255)
                                        aTCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAg                                                <  1:4517618/93‑1 (MQ=255)
                                          ctcGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGaa                                              <  2:2291829/93‑1 (MQ=255)
                                           tcGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGTCGCTCACTTCACGCACCGCAGAAc                                             >  2:3715351/1‑93 (MQ=255)
                                            cGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAAca                                            <  2:4731373/93‑1 (MQ=255)
                                             gAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAAcag                                           >  2:811026/1‑93 (MQ=255)
                                             gAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAAcag                                           >  2:1060541/1‑93 (MQ=255)
                                             gAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAAcag                                           >  1:5551167/1‑93 (MQ=255)
                                               aGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAAcagca                                         <  2:6475976/93‑1 (MQ=255)
                                                gCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAAcagcag                                        >  1:690157/1‑93 (MQ=255)
                                                    ttATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAg                                    >  1:3224977/1‑93 (MQ=255)
                                                       tCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCt                                 <  1:1421083/93‑1 (MQ=255)
                                                       tCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCt                                 <  2:5265575/93‑1 (MQ=255)
                                                        cAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTg                                <  1:2628160/93‑1 (MQ=255)
                                                         aGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTgg                               <  2:7241756/93‑1 (MQ=255)
                                                            cTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAg                            <  1:1634647/93‑1 (MQ=255)
                                                            cTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAg                            >  2:1520077/1‑93 (MQ=255)
                                                            cTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAg                            >  1:7139877/1‑93 (MQ=255)
                                                              gggCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGc                          <  2:5910202/93‑1 (MQ=255)
                                                               ggCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGcc                         <  1:6265324/93‑1 (MQ=255)
                                                                gCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCt                        >  1:5157803/1‑93 (MQ=255)
                                                                gCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCt                        <  1:7789570/93‑1 (MQ=255)
                                                                  tttCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTAt                      <  1:1452143/93‑1 (MQ=255)
                                                                  tttCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTAt                      <  2:1720958/93‑1 (MQ=255)
                                                                  tttCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTAt                      <  2:1259085/93‑1 (MQ=255)
                                                                     cgcgGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGcc                   <  1:3346183/93‑1 (MQ=255)
                                                                      gcgGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCg                  >  2:5584501/1‑93 (MQ=255)
                                                                      gcgGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCg                  >  1:2009410/1‑93 (MQ=255)
                                                                        ggTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGaa                <  1:5114658/93‑1 (MQ=255)
                                                                        ggTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGaa                >  2:3219701/1‑93 (MQ=255)
                                                                        ggTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGCAAGCCTGGCAGGCCTATGCCGaa                >  2:5414096/1‑93 (MQ=255)
                                                                           gAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAggg             >  1:5969541/1‑93 (MQ=255)
                                                                            aGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGgc            <  1:6188359/93‑1 (MQ=255)
                                                                             ggCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGgcg           >  1:6462474/1‑93 (MQ=255)
                                                                              gcgcTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGgcgc          <  1:4432219/93‑1 (MQ=255)
                                                                                 cTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGat       <  2:1763060/93‑1 (MQ=255)
                                                                                  tGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGata      >  2:1879999/1‑93 (MQ=255)
                                                                                  tGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGata      >  1:7921477/1‑93 (MQ=255)
                                                                                  tGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGata      <  2:7023407/93‑1 (MQ=255)
                                                                                  tGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGata      <  1:6788561/93‑1 (MQ=255)
                                                                                  tGGCGAGAATCAGTTCGGTTTACCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGata      >  1:2144276/1‑93 (MQ=255)
                                                                                    gCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATg    >  2:6643432/1‑93 (MQ=255)
                                                                                     cGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGa   <  1:5794956/93‑1 (MQ=255)
                                                                                      gagaATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGaa  >  2:5115216/1‑93 (MQ=255)
                                                                                         |                                                                                         
CTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAA  >  NC_000913/4395203‑4395381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 224 total aligned reads displayed.
GGCGCTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAACGTG  >  NC_000913/4395199‑4395385
                                                                                             |                                                                                             
GGCGCTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGA                                                                                               >  SRR4302543.7762586/1‑94 (MQ=60)
  CGCTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAAT                                                                                             <  SRR4302543.4214551/94‑1 (MQ=60)
  CGCTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAAT                                                                                             <  SRR4302543.7676625/94‑1 (MQ=60)
   GCTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATC                                                                                            >  SRR4302543.2854384/1‑94 (MQ=60)
    CTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCTGTGAGGCGCTGGCGAGAATCA                                                                                           <  SRR4302543.977150/94‑1 (MQ=60)
    CTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCA                                                                                           <  SRR4302543.1080013/94‑1 (MQ=60)
    CTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCA                                                                                           <  SRR4302543.6624426/94‑1 (MQ=60)
    CTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCA                                                                                           >  SRR4302543.491084/1‑94 (MQ=60)
     TGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAG                                                                                          <  SRR4302543.6217985/94‑1 (MQ=60)
     TGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAG                                                                                          <  SRR4302543.5402984/94‑1 (MQ=60)
     TGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAG                                                                                          <  SRR4302543.5626434/94‑1 (MQ=60)
        CTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTC                                                                                       <  SRR4302543.825799/94‑1 (MQ=60)
        CTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTC                                                                                       >  SRR4302543.899471/1‑94 (MQ=60)
        CTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTC                                                                                       <  SRR4302543.6543658/94‑1 (MQ=60)
        CTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTC                                                                                       <  SRR4302543.2477551/94‑1 (MQ=60)
        CCCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGAGCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTC                                                                                       <  SRR4302543.3031696/94‑1 (MQ=60)
         TCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCG                                                                                      <  SRR4302543.6493763/94‑1 (MQ=60)
         TCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCG                                                                                      <  SRR4302543.2379531/94‑1 (MQ=60)
         TCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCG                                                                                      <  SRR4302543.4250957/94‑1 (MQ=60)
         TCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCG                                                                                      <  SRR4302543.353291/94‑1 (MQ=60)
           GTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGT                                                                                    >  SRR4302543.6846366/1‑94 (MQ=60)
           GTCATGCCACCAGTAAAATCGCCTCTCTGGAAGATCTCGAAGCCACTATCAGACTCAGCCTTCCGGGTGAGGCGCTGGCGAGAATCAGTTCGGT                                                                                    >  SRR4302543.3247830/1‑94 (MQ=53)
            TCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTT                                                                                   >  SRR4302543.7166733/1‑94 (MQ=60)
            TCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGATTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGCT                                                                                   >  SRR4302543.7166734/1‑94 (MQ=60)
             CATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTT                                                                                  <  SRR4302543.5308063/94‑1 (MQ=60)
             CATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTT                                                                                  <  SRR4302543.2710315/94‑1 (MQ=60)
             CATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTT                                                                                  <  SRR4302543.554320/94‑1 (MQ=60)
             CATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTT                                                                                  <  SRR4302543.2530464/94‑1 (MQ=60)
              ATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTC                                                                                 >  SRR4302543.4157426/1‑94 (MQ=60)
              ATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTC                                                                                 >  SRR4302543.4230113/1‑94 (MQ=60)
              ATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTC                                                                                 >  SRR4302543.1607963/1‑94 (MQ=60)
               TGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCC                                                                                <  SRR4302543.4580601/94‑1 (MQ=60)
                GCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCC                                                                               >  SRR4302543.4998322/1‑94 (MQ=60)
                 CCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCG                                                                              >  SRR4302543.3143929/1‑94 (MQ=60)
                 CCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCG                                                                              <  SRR4302543.2837731/94‑1 (MQ=60)
                 CCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCG                                                                              >  SRR4302543.7677321/1‑94 (MQ=60)
                  CACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGC                                                                             >  SRR4302543.1844668/1‑94 (MQ=60)
                   ACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCC                                                                            >  SRR4302543.3925010/1‑94 (MQ=60)
                   ACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCC                                                                            >  SRR4302543.1952973/1‑94 (MQ=60)
                    CCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCT                                                                           <  SRR4302543.995338/94‑1 (MQ=60)
                    CCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCT                                                                           <  SRR4302543.206144/94‑1 (MQ=60)
                    CCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCT                                                                           <  SRR4302543.3279637/94‑1 (MQ=60)
                     CAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTG                                                                          >  SRR4302543.3691725/1‑94 (MQ=60)
                     CAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTG                                                                          >  SRR4302543.5738397/1‑94 (MQ=60)
                     CAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTG                                                                          >  SRR4302543.2221996/1‑94 (MQ=60)
                      AGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGA                                                                         >  SRR4302543.6484693/1‑94 (MQ=60)
                      AGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGA                                                                         >  SRR4302543.1365903/1‑94 (MQ=60)
                       GTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGAC                                                                        <  SRR4302543.5772157/94‑1 (MQ=60)
                       GTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGAC                                                                        >  SRR4302543.1892940/1‑94 (MQ=60)
                        TAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACG                                                                       >  SRR4302543.4101200/1‑94 (MQ=60)
                        TAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACG                                                                       <  SRR4302543.7426561/94‑1 (MQ=60)
                          AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCT                                                                     <  SRR4302543.3165090/94‑1 (MQ=60)
                             TCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCAC                                                                  <  SRR4302543.1763380/94‑1 (MQ=60)
                              CGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACT                                                                 <  SRR4302543.5414635/94‑1 (MQ=60)
                              CGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACT                                                                 >  SRR4302543.4277404/1‑94 (MQ=60)
                              CGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACT                                                                 >  SRR4302543.478147/1‑94 (MQ=60)
                              CGCCGCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACT                                                                 <  SRR4302543.2694152/94‑1 (MQ=60)
                               GCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTT                                                                <  SRR4302543.7762945/94‑1 (MQ=60)
                               GCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTT                                                                >  SRR4302543.5227110/1‑94 (MQ=60)
                                CCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTC                                                               <  SRR4302543.1127093/94‑1 (MQ=60)
                                CCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTC                                                               >  SRR4302543.7967646/1‑94 (MQ=60)
                                 CTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCA                                                              >  SRR4302543.7367864/1‑94 (MQ=60)
                                 CTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCA                                                              >  SRR4302543.7367863/1‑94 (MQ=60)
                                 CTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCA                                                              >  SRR4302543.1800447/1‑94 (MQ=60)
                                 CTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCA                                                              <  SRR4302543.4290497/94‑1 (MQ=60)
                                 CTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCA                                                              <  SRR4302543.2277646/94‑1 (MQ=60)
                                  TCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCAC                                                             <  SRR4302543.1156458/94‑1 (MQ=60)
                                  TCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCAC                                                             <  SRR4302543.7217155/94‑1 (MQ=60)
                                   CTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACG                                                            >  SRR4302543.270147/1‑94 (MQ=60)
                                   CTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACG                                                            <  SRR4302543.1080165/94‑1 (MQ=60)
                                   CTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACG                                                            <  SRR4302543.1370742/94‑1 (MQ=60)
                                   CTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACG                                                            >  SRR4302543.5748172/1‑94 (MQ=60)
                                    TCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGC                                                           <  SRR4302543.1482354/94‑1 (MQ=60)
                                    TCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGC                                                           <  SRR4302543.907363/94‑1 (MQ=60)
                                    TCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGC                                                           <  SRR4302543.245031/94‑1 (MQ=60)
                                    TCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGC                                                           >  SRR4302543.7237475/1‑94 (MQ=60)
                                     CTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCA                                                          >  SRR4302543.5133879/1‑94 (MQ=60)
                                     CTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCA                                                          >  SRR4302543.3052565/1‑94 (MQ=60)
                                     CTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCA                                                          >  SRR4302543.881436/1‑94 (MQ=60)
                                      TGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCAC                                                         <  SRR4302543.1871578/94‑1 (MQ=60)
                                      TGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCAC                                                         <  SRR4302543.1917819/94‑1 (MQ=60)
                                       GGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACC                                                        >  SRR4302543.1207217/1‑94 (MQ=60)
                                        GACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCG                                                       <  SRR4302543.4043623/94‑1 (MQ=60)
                                        GACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCG                                                       >  SRR4302543.2377006/1‑94 (MQ=60)
                                          CGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCGCCGCA                                                     >  SRR4302543.6806625/1‑94 (MQ=60)
                                          CGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCA                                                     >  SRR4302543.3899758/1‑94 (MQ=60)
                                          CGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCA                                                     >  SRR4302543.3528126/1‑94 (MQ=60)
                                          CGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCA                                                     <  SRR4302543.3517312/94‑1 (MQ=60)
                                          CGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCA                                                     >  SRR4302543.1229128/1‑94 (MQ=60)
                                           GATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAG                                                    >  SRR4302543.4861974/1‑94 (MQ=60)
                                           GATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAG                                                    <  SRR4302543.1091201/94‑1 (MQ=60)
                                           GATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAG                                                    >  SRR4302543.7583927/1‑94 (MQ=60)
                                            ATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGA                                                   <  SRR4302543.4558705/94‑1 (MQ=60)
                                             TCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAA                                                  <  SRR4302543.7950807/94‑1 (MQ=60)
                                               TCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACA                                                <  SRR4302543.7728232/94‑1 (MQ=60)
                                               TCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACA                                                <  SRR4302543.6951563/94‑1 (MQ=60)
                                                CGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAG                                               >  SRR4302543.1678679/1‑94 (MQ=60)
                                                CGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAG                                               <  SRR4302543.4580672/94‑1 (MQ=60)
                                                CGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAG                                               >  SRR4302543.5601648/1‑94 (MQ=60)
                                                 GAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACCGC                                              >  SRR4302543.3243473/1‑94 (MQ=60)
                                                 GAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGC                                              >  SRR4302543.1454475/1‑94 (MQ=60)
                                                 GAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGC                                              >  SRR4302543.6488834/1‑94 (MQ=60)
                                                 GAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGC                                              >  SRR4302543.2834487/1‑94 (MQ=60)
                                                  AAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCA                                             >  SRR4302543.4072634/1‑94 (MQ=60)
                                                   AGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAG                                            >  SRR4302543.773440/1‑94 (MQ=60)
                                                   AGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAG                                            >  SRR4302543.696496/1‑94 (MQ=60)
                                                   AGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAG                                            <  SRR4302543.5194125/94‑1 (MQ=60)
                                                   AGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAG                                            >  SRR4302543.6849874/1‑94 (MQ=60)
                                                    GCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGG                                           <  SRR4302543.1551874/94‑1 (MQ=60)
                                                    GCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGG                                           >  SRR4302543.3618620/1‑94 (MQ=60)
                                                     CCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGCATCAGTTCGGTTGCCCGCCTGgtgctgcgttccggcccggccgaccaccggga                                          >  SRR4302543.331461/1‑62 (MQ=60)
                                                     CCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGA                                          >  SRR4302543.4197785/1‑94 (MQ=60)
                                                     CCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGA                                          >  SRR4302543.4197786/1‑94 (MQ=60)
                                                      CATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAA                                         <  SRR4302543.3288701/94‑1 (MQ=60)
                                                      CATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAA                                         >  SRR4302543.3007787/1‑94 (MQ=60)
                                                      CATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAA                                         >  SRR4302543.5585549/1‑94 (MQ=60)
                                                      CATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAA                                         <  SRR4302543.984049/94‑1 (MQ=60)
                                                       CTTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTGCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAG                                        <  SRR4302543.5942910/94‑1 (MQ=60)
                                                       ATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAG                                        >  SRR4302543.1382216/1‑94 (MQ=60)
                                                       ATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAG                                        >  SRR4302543.3254129/1‑94 (MQ=60)
                                                       ATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAG                                        >  SRR4302543.3451875/1‑94 (MQ=60)
                                                       ATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAG                                        <  SRR4302543.5942909/94‑1 (MQ=60)
                                                        TTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGC                                       >  SRR4302543.629413/1‑94 (MQ=60)
                                                         TATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCC                                      >  SRR4302543.362124/1‑94 (MQ=60)
                                                         TATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCC                                      <  SRR4302543.6258775/94‑1 (MQ=60)
                                                         TATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCC                                      <  SRR4302543.3441817/94‑1 (MQ=60)
                                                         TATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCC                                      <  SRR4302543.6577825/94‑1 (MQ=60)
                                                         TATCAGCCTGGGCTTTCGCGGTGAGGCCCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCC                                      <  SRR4302543.5103001/94‑1 (MQ=60)
                                                          ATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCT                                     <  SRR4302543.3862148/94‑1 (MQ=60)
                                                          ATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCT                                     >  SRR4302543.2659905/1‑94 (MQ=60)
                                                          ATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCT                                     <  SRR4302543.5744072/94‑1 (MQ=60)
                                                           TCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTG                                    <  SRR4302543.1433947/94‑1 (MQ=60)
                                                            CAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGG                                   <  SRR4302543.2651943/94‑1 (MQ=60)
                                                             AGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGC                                  <  SRR4302543.5420746/94‑1 (MQ=60)
                                                              GCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCA                                 <  SRR4302543.7106185/94‑1 (MQ=60)
                                                               CCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAG                                >  SRR4302543.2196514/1‑94 (MQ=60)
                                                               CCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAG                                >  SRR4302543.7209255/1‑94 (MQ=60)
                                                               CCTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAG                                <  SRR4302543.3725157/94‑1 (MQ=60)
                                                                CTGGGCTTTTGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGG                               >  SRR4302543.4989433/1‑94 (MQ=60)
                                                                CTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGG                               <  SRR4302543.1649227/94‑1 (MQ=60)
                                                                CTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGG                               <  SRR4302543.5245294/94‑1 (MQ=60)
                                                                CTGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGG                               >  SRR4302543.6272176/1‑94 (MQ=60)
                                                                 TGGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGC                              >  SRR4302543.2638595/1‑94 (MQ=60)
                                                                  GGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCC                             <  SRR4302543.1396414/94‑1 (MQ=60)
                                                                  GGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCC                             <  SRR4302543.3904066/94‑1 (MQ=60)
                                                                  GGGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCC                             >  SRR4302543.6342648/1‑94 (MQ=60)
                                                                   GGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCT                            >  SRR4302543.2101149/1‑94 (MQ=60)
                                                                   GGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCT                            <  SRR4302543.6324400/94‑1 (MQ=60)
                                                                   GGCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCT                            >  SRR4302543.5204414/1‑94 (MQ=60)
                                                                    GCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTA                           >  SRR4302543.24832/1‑94 (MQ=60)
                                                                    GCTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTA                           <  SRR4302543.7862991/94‑1 (MQ=60)
                                                                     CTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTAT                          <  SRR4302543.7199015/94‑1 (MQ=60)
                                                                     CTTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTAT                          >  SRR4302543.2329801/1‑94 (MQ=60)
                                                                      TTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATG                         <  SRR4302543.1465254/94‑1 (MQ=60)
                                                                      TTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATG                         <  SRR4302543.1321359/94‑1 (MQ=60)
                                                                      TTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATG                         <  SRR4302543.5139800/94‑1 (MQ=60)
                                                                      TTTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATG                         >  SRR4302543.7086994/1‑94 (MQ=60)
                                                                      TTTCGCGGTGAGGCGCTGGCGAGAATCAGCTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATG                         <  SRR4302543.2074350/94‑1 (MQ=60)
                                                                       TTCGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGC                        <  SRR4302543.4517988/94‑1 (MQ=60)
                                                                         CGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCG                      >  SRR4302543.2027467/1‑94 (MQ=60)
                                                                         CGCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCG                      <  SRR4302543.3376314/94‑1 (MQ=60)
                                                                          GCGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGA                     >  SRR4302543.6949944/1‑94 (MQ=60)
                                                                           CGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAA                    >  SRR4302543.7811419/1‑94 (MQ=60)
                                                                           CGGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAA                    >  SRR4302543.5650973/1‑94 (MQ=60)
                                                                            GGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAG                   <  SRR4302543.1206723/94‑1 (MQ=60)
                                                                            GGTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAG                   >  SRR4302543.6913168/1‑94 (MQ=60)
                                                                             GTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGTCTATGCCGAAGG                  >  SRR4302543.1345933/1‑94 (MQ=60)
                                                                             GTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGG                  >  SRR4302543.1833347/1‑94 (MQ=60)
                                                                             GTGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGG                  <  SRR4302543.6475997/94‑1 (MQ=60)
                                                                              TGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGG                 <  SRR4302543.5329832/94‑1 (MQ=60)
                                                                              TGAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGG                 >  SRR4302543.6024204/1‑94 (MQ=60)
                                                                               GAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGC                >  SRR4302543.8005371/1‑94 (MQ=60)
                                                                               GAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGC                <  SRR4302543.1951213/94‑1 (MQ=60)
                                                                               GAGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGC                <  SRR4302543.1852557/94‑1 (MQ=60)
                                                                                AGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCG               >  SRR4302543.6523366/1‑94 (MQ=60)
                                                                                AGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCG               <  SRR4302543.7804892/94‑1 (MQ=60)
                                                                                AGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCG               <  SRR4302543.6246828/94‑1 (MQ=60)
                                                                                AGGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCG               <  SRR4302543.7804893/94‑1 (MQ=60)
                                                                                 GGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGC              <  SRR4302543.2848573/94‑1 (MQ=60)
                                                                                 GGCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGC              >  SRR4302543.2835837/1‑94 (MQ=60)
                                                                                  GCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCG             >  SRR4302543.395360/1‑94 (MQ=60)
                                                                                  GCGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCG             <  SRR4302543.4472367/94‑1 (MQ=60)
                                                                                   CGCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGA            <  SRR4302543.2601965/94‑1 (MQ=60)
                                                                                    GCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGAT           <  SRR4302543.5163875/94‑1 (MQ=60)
                                                                                    GCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGAT           >  SRR4302543.2662357/1‑94 (MQ=60)
                                                                                    GCTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGAT           <  SRR4302543.5163874/94‑1 (MQ=60)
                                                                                     CTGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATA          >  SRR4302543.6223048/1‑94 (MQ=60)
                                                                                     CTGGCGAGAATCAGTTCGGTTTACCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATA          >  SRR4302543.2163474/1‑94 (MQ=60)
                                                                                      TGGGGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATAT         <  SRR4302543.4481276/94‑1 (MQ=60)
                                                                                      TGGCGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATAT         <  SRR4302543.6852671/94‑1 (MQ=60)
                                                                                         CGAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAA      <  SRR4302543.5847678/94‑1 (MQ=60)
                                                                                          GAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAAC     <  SRR4302543.1955339/94‑1 (MQ=60)
                                                                                          GAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAAC     >  SRR4302543.401662/1‑94 (MQ=60)
                                                                                          GAGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAAC     >  SRR4302543.134877/1‑94 (MQ=60)
                                                                                           AGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAACG    >  SRR4302543.6393088/1‑94 (MQ=60)
                                                                                           AGAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAACG    <  SRR4302543.2409801/94‑1 (MQ=60)
                                                                                            GAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAACGT   >  SRR4302543.7395411/1‑94 (MQ=60)
                                                                                            GAATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAACGT   <  SRR4302543.2038107/94‑1 (MQ=60)
                                                                                             AATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAACGTG  >  SRR4302543.5647501/1‑94 (MQ=60)
                                                                                             AATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAACGTG  >  SRR4302543.4364639/1‑94 (MQ=60)
                                                                                             |                                                                                             
GGCGCTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAACGTG  >  NC_000913/4395199‑4395385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑