Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,406,298	A→G	Q689Q (CAA→CAG)	b4179 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,406,298	0	A	G	99.7%	1013.9 / ‑5.1	321	Q689Q (CAA→CAG)	b4179	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (159/161); total (159/162)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01

Only 100 of 334 total aligned reads displayed.

TTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAACGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAA  >  NC_000913/4406209‑4406387

ttcGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAgcgc                                                                                        >  1:7176945/1‑93 (MQ=255)

ttcGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAgcgc                                                                                        <  2:507540/93‑1 (MQ=255)

 tcGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGcc                                                                                       <  1:16087/93‑1 (MQ=255)

  cgtccgtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTCGGGAAGCGCCt                                                                                      >  2:7531800/1‑93 (MQ=255)

  cgtccgtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCt                                                                                      <  2:4843347/93‑1 (MQ=255)

  cgtccgtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCt                                                                                      >  2:6792594/1‑93 (MQ=255)

  cgtccgtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCt                                                                                      <  2:247613/93‑1 (MQ=255)

   gtccgtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTg                                                                                     >  1:1603350/1‑93 (MQ=255)

   gtccgtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTg                                                                                     >  1:857029/1‑93 (MQ=255)

    tccgtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGa                                                                                    <  1:1408378/93‑1 (MQ=255)

    tccgtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGa                                                                                    <  2:404807/93‑1 (MQ=255)

    tccgtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGa                                                                                    <  1:2589026/93‑1 (MQ=255)

    tccgtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGa                                                                                    <  2:6478594/93‑1 (MQ=255)

    tccgtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGa                                                                                    >  2:6142766/1‑93 (MQ=255)

       gtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATgg                                                                                 <  1:3849907/93‑1 (MQ=255)

       gtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATgg                                                                                 <  1:4712262/93‑1 (MQ=255)

       gtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATgg                                                                                 <  2:367035/93‑1 (MQ=255)

       gtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATgg                                                                                 <  2:578941/93‑1 (MQ=255)

       gtcTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATgg                                                                                 <  1:6658186/93‑1 (MQ=255)

          tGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATggggg                                                                              <  2:1940480/93‑1 (MQ=255)

          tGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATggggg                                                                              <  2:2029218/93‑1 (MQ=255)

          tGGACGACTTGTTCATTGATGGGCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGTGCAGCGCCTGATggggg                                                                              >  2:4156009/1‑93 (MQ=255)

           ggACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGa                                                                             >  2:7289636/1‑93 (MQ=255)

                  ttGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGc                                                                      >  1:7585125/1‑93 (MQ=255)

                  ttGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGc                                                                      <  1:7925208/93‑1 (MQ=255)

                  ttGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGc                                                                      >  2:3952590/1‑93 (MQ=255)

                  ttGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCCGATGGGGGAATCCAGc                                                                      <  1:4971914/93‑1 (MQ=255)

                  ctGTTGATTGATGGTCGGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGc                                                                      <  1:6707890/92‑1 (MQ=255)

                   tGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCg                                                                     >  1:4309079/1‑93 (MQ=255)

                   tGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCg                                                                     <  1:6873579/93‑1 (MQ=255)

                    gTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCgg                                                                    >  2:2929444/1‑93 (MQ=255)

                        aTTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAg                                                                >  1:987959/1‑93 (MQ=255)

                         ttGATGGTCTGGTCCCTGCCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGa                                                               <  1:2382205/93‑1 (MQ=255)

                         ttGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGa                                                               >  2:7675443/1‑93 (MQ=255)

                          tGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGAc                                                              <  1:4460141/93‑1 (MQ=255)

                           gATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACt                                                             >  2:7426512/1‑93 (MQ=255)

                             tggtctggtcCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTa                                                           <  1:6917043/93‑1 (MQ=255)

                              ggtctggtcCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTAt                                                          >  1:1121961/1‑93 (MQ=255)

                               gtctggtcCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATc                                                         <  2:1058486/93‑1 (MQ=255)

                                tctggtcCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCg                                                        >  2:3735619/1‑93 (MQ=255)

                                tctggtcCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCg                                                        >  2:3881063/1‑93 (MQ=255)

                                 ctggtcCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGc                                                       <  2:6424258/93‑1 (MQ=255)

                                  tggtcCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGcc                                                      <  1:7265904/93‑1 (MQ=255)

                                   ggtcCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCt                                                     <  2:5681687/93‑1 (MQ=255)

                                   ggtcCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCt                                                     >  2:1774556/1‑93 (MQ=255)

                                    gtcCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTg                                                    <  2:6213381/93‑1 (MQ=255)

                                    gtcCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTg                                                    <  1:1202335/93‑1 (MQ=255)

                                     tcCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTgg                                                   <  2:4571478/93‑1 (MQ=255)

                                        aTGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCg                                                >  1:5502219/1‑93 (MQ=255)

                                         tGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGa                                               >  2:1613279/1‑93 (MQ=255)

                                          gTCTCTTCGCTGGACAATGACTATTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGAt                                              <  2:4334047/93‑1 (MQ=255)

                                          gTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGAt                                              >  1:7489091/1‑93 (MQ=255)

                                           tctcTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATc                                             >  2:4907387/1‑93 (MQ=255)

                                           tctcTTCGCTGGACAATGACTACTATCGCTTTGACCAGGGAGGGCAGCGCCTGATGGGGGAATCCAGCGGCAAGAGTTATCGCCTGGGCGacc                                             >  2:1878041/1‑91 (MQ=255)

                                            ctctTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATcg                                            >  2:1355538/1‑93 (MQ=255)

                                             tctTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATcgg                                           >  2:2619704/1‑92 (MQ=255)

                                             tctTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATcgc                                           >  2:7615177/1‑93 (MQ=255)

                                              ctTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATcgcg                                          >  2:816961/1‑93 (MQ=255)

                                                tCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTg                                        <  1:3968454/93‑1 (MQ=255)

                                                tCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGAGGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTg                                        <  2:5484317/93‑1 (MQ=255)

                                                   cTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGaa                                     <  1:4864709/93‑1 (MQ=255)

                                                   cTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGaa                                     <  1:6057363/93‑1 (MQ=255)

                                                    tGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTGTCGCCTGGGCGATCGCGTGGAAg                                    >  2:4295851/1‑93 (MQ=255)

                                                    tGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAg                                    >  2:4361712/1‑93 (MQ=255)

                                                       aCAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTc                                 <  1:5083307/93‑1 (MQ=255)

                                                       aCAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTc                                 >  1:7049091/1‑93 (MQ=255)

                                                        cAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTcg                                >  1:1672523/1‑93 (MQ=255)

                                                         aaTGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGttggg                               >  2:6099213/1‑90 (MQ=255)

                                                         aaTGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTcgc                               <  2:1558172/93‑1 (MQ=255)

                                                         aaTGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTcgc                               >  2:3434637/1‑93 (MQ=255)

                                                            gACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGGTCGCGTc                            <  2:7916323/93‑1 (MQ=255)

                                                             actactATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCg                           >  1:2952127/1‑93 (MQ=255)

                                                               tactaTCGCTTTGACCAGGCAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATTGCCTGGGCGATCGCGTGGAAGTTCGCGTCgca                         >  2:6761628/1‑91 (MQ=255)

                                                                actaTCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAg                        >  1:5129132/1‑93 (MQ=255)

                                                                actaTCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAg                        <  1:569258/93‑1 (MQ=255)

                                                                 ctaTCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGc                       >  2:5265278/1‑93 (MQ=255)

                                                                 ctaTCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGc                       >  2:5877258/1‑93 (MQ=255)

                                                                 ctaTCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGc                       >  2:7476329/1‑93 (MQ=255)

                                                                  taTCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCg                      <  1:3058650/93‑1 (MQ=255)

                                                                  taTCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCg                      >  1:7727810/1‑93 (MQ=255)

                                                                   aTCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCgg                     >  2:234106/1‑93 (MQ=255)

                                                                      gCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTa                  <  1:4070259/93‑1 (MQ=255)

                                                                      gCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTa                  >  1:364375/1‑93 (MQ=255)

                                                                       cTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTaa                 <  2:4760880/93‑1 (MQ=255)

                                                                        tttGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAat                >  1:4191665/1‑93 (MQ=255)

                                                                         ttGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAata               >  2:5435500/1‑93 (MQ=255)

                                                                         ttGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAata               <  1:5384296/93‑1 (MQ=255)

                                                                         ttGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAata               <  2:7812581/93‑1 (MQ=255)

                                                                          tGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAatat              <  2:3589283/93‑1 (MQ=255)

                                                                          tGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAatat              >  1:321702/1‑93 (MQ=255)

                                                                          tGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAatat              <  2:2136273/93‑1 (MQ=255)

                                                                             ccAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGa           <  1:5245591/93‑1 (MQ=255)

                                                                             ccAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGa           <  1:6223059/93‑1 (MQ=255)

                                                                               aGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACg         <  1:228331/93‑1 (MQ=255)

                                                                                ggTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGa        >  2:6555370/1‑93 (MQ=255)

                                                                                ggTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGa        >  1:3319423/1‑93 (MQ=255)

                                                                                  tAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAgc      >  2:3301925/1‑93 (MQ=255)

                                                                                  tAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAgc      <  2:4518709/93‑1 (MQ=255)

                                                                                    gggCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAgcgc    >  1:2111286/1‑93 (MQ=255)

                                                                                      gCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCaa  >  1:6424021/1‑93 (MQ=255)

TTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAACGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAA  >  NC_000913/4406209‑4406387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAACGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAAAATC  >  NC_000913/4406205‑4406391

CTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAG                                                                                               >  SRR4302543.6507517/1‑94 (MQ=60)

CTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAG                                                                                               <  SRR4302543.6036102/94‑1 (MQ=60)

 TTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGC                                                                                              >  SRR4302543.4043872/1‑94 (MQ=60)

 TTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGC                                                                                              >  SRR4302543.148355/1‑94 (MQ=60)

 TTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGC                                                                                              >  SRR4302543.3331803/1‑94 (MQ=60)

 TTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGC                                                                                              <  SRR4302543.7842052/94‑1 (MQ=60)

  TCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGAGCAGGTAGGGCAGCG                                                                                             <  SRR4302543.4467456/94‑1 (MQ=60)

   CTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGC                                                                                            >  SRR4302543.3697866/1‑94 (MQ=60)

   CTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGC                                                                                            >  SRR4302543.6941454/1‑94 (MQ=60)

   CTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGC                                                                                            >  SRR4302543.3855172/1‑94 (MQ=60)

   CTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGC                                                                                            >  SRR4302543.7246614/1‑94 (MQ=60)

    TTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCC                                                                                           >  SRR4302543.3642254/1‑94 (MQ=60)

     TCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCT                                                                                          <  SRR4302543.5195595/94‑1 (MQ=60)

     TCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCT                                                                                          <  SRR4302543.16234/94‑1 (MQ=60)

      CGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTG                                                                                         >  SRR4302543.1617660/1‑94 (MQ=60)

      CGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTG                                                                                         >  SRR4302543.864660/1‑94 (MQ=60)

      CGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTG                                                                                         >  SRR4302543.416680/1‑94 (MQ=60)

        TCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGCCCAGGTAGGGCAGCGCCTGAT                                                                                       <  SRR4302543.3277345/94‑1 (MQ=60)

        TCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGAT                                                                                       <  SRR4302543.7884389/94‑1 (MQ=60)

        TCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGAT                                                                                       <  SRR4302543.2612567/94‑1 (MQ=60)

        TCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGAT                                                                                       <  SRR4302543.1421103/94‑1 (MQ=60)

        TCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGAT                                                                                       <  SRR4302543.921218/94‑1 (MQ=60)

          CGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGG                                                                                     >  SRR4302543.6770111/1‑94 (MQ=60)

          CGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGG                                                                                     <  SRR4302543.4371363/94‑1 (MQ=60)

           GTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGG                                                                                    >  SRR4302543.6905310/1‑94 (MQ=60)

           GTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGG                                                                                    <  SRR4302543.4755322/94‑1 (MQ=60)

           GTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGG                                                                                    <  SRR4302543.3883911/94‑1 (MQ=60)

           GTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGG                                                                                    >  SRR4302543.3291465/1‑94 (MQ=60)

           GTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGG                                                                                    <  SRR4302543.6721050/94‑1 (MQ=60)

            TCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGG                                                                                   <  SRR4302543.13423/94‑1 (MQ=60)

             CTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGG                                                                                  >  SRR4302543.1939481/1‑94 (MQ=60)

             CTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGG                                                                                  <  SRR4302543.5285784/94‑1 (MQ=60)

               GGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACTATGACTACTATCGCTTTGACCAGGTAGGGCAGGGCCTGATGGGGGgg                                                                                >  SRR4302543.5078997/1‑92 (MQ=60)

                 ACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATC                                                                              >  SRR4302543.6599506/1‑94 (MQ=60)

                   GACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCA                                                                            <  SRR4302543.1665030/94‑1 (MQ=60)

                    ACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAG                                                                           <  SRR4302543.7687184/94‑1 (MQ=60)

                     CTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGC                                                                          >  SRR4302543.5812736/1‑94 (MQ=60)

                     CTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGC                                                                          >  SRR4302543.7657213/1‑94 (MQ=60)

                     CTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGC                                                                          >  SRR4302543.7657214/1‑94 (MQ=60)

                     CTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGC                                                                          <  SRR4302543.7086110/94‑1 (MQ=60)

                      TTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCG                                                                         >  SRR4302543.4348221/1‑94 (MQ=60)

                      TTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCG                                                                         <  SRR4302543.7999636/94‑1 (MQ=60)

                      TTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCCGATGGGGGAATCCAGCG                                                                         <  SRR4302543.5017170/94‑1 (MQ=60)

                      CTGTTGATTGATGGTCGGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCG                                                                         <  SRR4302543.6771221/94‑1 (MQ=60)

                       TGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGG                                                                        <  SRR4302543.6938300/94‑1 (MQ=60)

                       TGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGG                                                                        >  SRR4302543.5129267/1‑94 (MQ=60)

                       TGTTCATTGATGGTCTGGTCCATGGCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGG                                                                        <  SRR4302543.6938304/94‑1 (MQ=60)

                        GTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGC                                                                       <  SRR4302543.5324385/94‑1 (MQ=60)

                         TTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCC                                                                      >  SRR4302543.5003574/1‑94 (MQ=60)

                          TCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCA                                                                     >  SRR4302543.162226/1‑94 (MQ=60)

                           CATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAG                                                                    >  SRR4302543.548565/1‑94 (MQ=60)

                           CATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAG                                                                    >  SRR4302543.996675/1‑94 (MQ=60)

                             TTGATGGTCTGGTCCCTGCCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGAC                                                                  <  SRR4302543.2403774/94‑1 (MQ=60)

                              tgagtgttTGGTCCAGGTCTCTTCGCTCGACAATGACTCCTATCGCTTGGCCCAGTTAGGGCAGCGCCTGAGGGGGGAATCCAGCGGCCAGACT                                                                 <  SRR4302543.4500555/86‑1 (MQ=50)

                              TGATTGTCTTGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACT                                                                 <  SRR4302543.4366161/94‑1 (MQ=60)

                              TGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACT                                                                 >  SRR4302543.7606347/1‑94 (MQ=60)

                              TGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACT                                                                 <  SRR4302543.4500554/94‑1 (MQ=60)

                              TGATGGGCTGTTCCATGTCTCGTCGAGGGCAAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGAGGGGGGAATCCAGCGGCCAGACT                                                                 <  SRR4302543.4500556/94‑1 (MQ=60)

                               GATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTT                                                                <  SRR4302543.4682149/94‑1 (MQ=60)

                               GATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTT                                                                <  SRR4302543.7316517/94‑1 (MQ=60)

                                 TGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTAT                                                              <  SRR4302543.2022599/94‑1 (MQ=60)

                                 TGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTAT                                                              >  SRR4302543.1132139/1‑94 (MQ=60)

                                 TGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTAT                                                              <  SRR4302543.6982069/94‑1 (MQ=60)

                                  GGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATC                                                             >  SRR4302543.2493988/1‑94 (MQ=60)

                                  GGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATC                                                             <  SRR4302543.7696979/94‑1 (MQ=60)

                                  GGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATC                                                             >  SRR4302543.7007976/1‑94 (MQ=60)

                                   GTCTGGTCCATGTCTCTTCTCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCG                                                            <  SRR4302543.6476895/94‑1 (MQ=60)

                                    TCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGC                                                           >  SRR4302543.5162266/1‑94 (MQ=60)

                                     CTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCC                                                          >  SRR4302543.5550775/1‑94 (MQ=60)

                                     CTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCC                                                          >  SRR4302543.5148073/1‑94 (MQ=60)

                                     CTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCC                                                          >  SRR4302543.2269358/1‑94 (MQ=60)

                                      TGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCT                                                         <  SRR4302543.6797735/94‑1 (MQ=60)

                                      TGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCT                                                         <  SRR4302543.5360281/94‑1 (MQ=60)

                                      TGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCT                                                         <  SRR4302543.7336103/94‑1 (MQ=60)

                                      TGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCT                                                         <  SRR4302543.6501148/94‑1 (MQ=60)

                                      TGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCT                                                         <  SRR4302543.6557599/94‑1 (MQ=60)

                                        GTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGG                                                       >  SRR4302543.99028/1‑94 (MQ=60)

                                        GTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGG                                                       <  SRR4302543.1213158/94‑1 (MQ=60)

                                        GTCAATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGG                                                       <  SRR4302543.3145829/94‑1 (MQ=60)

                                         TCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGG                                                      <  SRR4302543.2392623/94‑1 (MQ=60)

                                          CCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTAGGC                                                     >  SRR4302543.4077441/1‑94 (MQ=60)

                                           CATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCG                                                    >  SRR4302543.5552159/1‑94 (MQ=60)

                                           CATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCG                                                    >  SRR4302543.2451542/1‑94 (MQ=60)

                                            ATGTCTCTGCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGAGCCTGATGGGGGAATCCAGCGGCCAGACATATCGCCTGGGCGA                                                   >  SRR4302543.3991658/1‑94 (MQ=60)

                                             TGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGAT                                                  >  SRR4302543.7560749/1‑94 (MQ=60)

                                             TGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGAT                                                  <  SRR4302543.1152988/94‑1 (MQ=60)

                                             TGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGAT                                                  >  SRR4302543.4326620/1‑94 (MQ=60)

                                              GTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATC                                                 >  SRR4302543.1515247/1‑94 (MQ=60)

                                              GTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATC                                                 >  SRR4302543.1515246/1‑94 (MQ=60)

                                               TCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCG                                                >  SRR4302543.697754/1‑94 (MQ=60)

                                                CTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGC                                               >  SRR4302543.5720021/1‑94 (MQ=60)

                                                CTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGC                                               >  SRR4302543.1262818/1‑94 (MQ=60)

                                                 TCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCG                                              >  SRR4302543.1619072/1‑94 (MQ=60)

                                                  CTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAACGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGT                                             <  SRR4302543.7609945/94‑1 (MQ=60)

                                                   TTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTG                                            <  SRR4302543.7912660/94‑1 (MQ=60)

                                                    TCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGG                                           <  SRR4302543.4003631/94‑1 (MQ=60)

                                                     CGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGA                                          >  SRR4302543.4224590/1‑94 (MQ=60)

                                                     CGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGA                                          >  SRR4302543.4224589/1‑94 (MQ=60)

                                                     CGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGA                                          <  SRR4302543.7130504/94‑1 (MQ=60)

                                                      GCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAA                                         >  SRR4302543.2307192/1‑94 (MQ=60)

                                                       CTGGATAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAG                                        >  SRR4302543.281037/1‑94 (MQ=60)

                                                       CTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAG                                        <  SRR4302543.4909054/94‑1 (MQ=60)

                                                       CTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAG                                        >  SRR4302543.7529346/1‑94 (MQ=60)

                                                       CTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAG                                        <  SRR4302543.6114707/94‑1 (MQ=60)

                                                       CTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAG                                        >  SRR4302543.1820639/1‑94 (MQ=60)

                                                         GGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTT                                      <  SRR4302543.5376397/94‑1 (MQ=60)

                                                         GGACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTT                                      >  SRR4302543.806501/1‑94 (MQ=60)

                                                          GACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTC                                     >  SRR4302543.7117483/1‑94 (MQ=60)

                                                          GACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTC                                     <  SRR4302543.5015304/94‑1 (MQ=60)

                                                           ACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGCAGTTCG                                    >  SRR4302543.1687512/1‑94 (MQ=60)

                                                           ACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCG                                    >  SRR4302543.7143717/1‑94 (MQ=60)

                                                           ACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCG                                    <  SRR4302543.5129400/94‑1 (MQ=60)

                                                           ACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCG                                    >  SRR4302543.1687513/1‑94 (MQ=60)

                                                           ACAATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCG                                    >  SRR4302543.3114481/1‑94 (MQ=60)

                                                             AATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCG                                  >  SRR4302543.3025045/1‑94 (MQ=60)

                                                             AATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCG                                  <  SRR4302543.620838/94‑1 (MQ=60)

                                                             AATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCG                                  <  SRR4302543.6414465/94‑1 (MQ=60)

                                                              ATGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGT                                 >  SRR4302543.6216429/1‑94 (MQ=60)

                                                               TGACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTC                                <  SRR4302543.2407076/94‑1 (MQ=60)

                                                                GACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCG                               >  SRR4302543.2978934/1‑94 (MQ=60)

                                                                GACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCG                               >  SRR4302543.4824653/1‑94 (MQ=60)

                                                                 ACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGA                              >  SRR4302543.6033450/1‑94 (MQ=60)

                                                                 ACTACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGA                              >  SRR4302543.93999/1‑94 (MQ=60)

                                                                   TACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAG                            >  SRR4302543.3962879/1‑94 (MQ=60)

                                                                   TACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAG                            >  SRR4302543.5175490/1‑94 (MQ=60)

                                                                   TACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAG                            <  SRR4302543.3166898/94‑1 (MQ=60)

                                                                    ACTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGC                           <  SRR4302543.574465/94‑1 (MQ=60)

                                                                     CTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCG                          <  SRR4302543.4038844/94‑1 (MQ=60)

                                                                     CTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCG                          >  SRR4302543.7800853/1‑94 (MQ=60)

                                                                     CTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCG                          >  SRR4302543.7249564/1‑94 (MQ=60)

                                                                     CTATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCG                          <  SRR4302543.4862708/94‑1 (MQ=60)

                                                                      TATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGG                         <  SRR4302543.3086174/94‑1 (MQ=60)

                                                                       ATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGT                        >  SRR4302543.2182665/1‑94 (MQ=60)

                                                                       ATCGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGT                        <  SRR4302543.1467750/94‑1 (MQ=60)

                                                                         CGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTA                      <  SRR4302543.1158026/94‑1 (MQ=60)

                                                                         CGCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTA                      >  SRR4302543.367754/1‑94 (MQ=60)

                                                                          GCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAA                     <  SRR4302543.4106718/94‑1 (MQ=60)

                                                                          GCTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAA                     >  SRR4302543.3456904/1‑94 (MQ=60)

                                                                           CTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAAT                    >  SRR4302543.296204/1‑94 (MQ=60)

                                                                           CTTTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAAT                    >  SRR4302543.4229674/1‑94 (MQ=60)

                                                                             TTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATAT                  >  SRR4302543.324614/1‑94 (MQ=60)

                                                                             TTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATAT                  <  SRR4302543.6757368/94‑1 (MQ=60)

                                                                             TTGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATAT                  <  SRR4302543.5433175/94‑1 (MQ=60)

                                                                              TGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATG                 <  SRR4302543.4624884/94‑1 (MQ=60)

                                                                              TGACCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATG                 <  SRR4302543.835381/94‑1 (MQ=60)

                                                                                 CCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGAC              <  SRR4302543.2999856/94‑1 (MQ=60)

                                                                                 CCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGAC              <  SRR4302543.5292877/94‑1 (MQ=60)

                                                                                 CCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGAC              <  SRR4302543.5711744/94‑1 (MQ=60)

                                                                                 CCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGAC              <  SRR4302543.6281803/94‑1 (MQ=60)

                                                                                 CCAGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGAC              >  SRR4302543.5864925/1‑94 (MQ=60)

                                                                                   AGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGA            >  SRR4302543.3349381/1‑94 (MQ=60)

                                                                                   AGGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGA            <  SRR4302543.230305/94‑1 (MQ=60)

                                                                                    GGTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAG           <  SRR4302543.5054063/94‑1 (MQ=60)

                                                                                     GTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGC          >  SRR4302543.7407554/1‑94 (MQ=60)

                                                                                     GTAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGC          <  SRR4302543.7294409/94‑1 (MQ=60)

                                                                                      TAGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCG         <  SRR4302543.4292700/94‑1 (MQ=60)

                                                                                       AGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGC        >  SRR4302543.2130187/1‑94 (MQ=60)

                                                                                       AGGGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGC        >  SRR4302543.3799210/1‑94 (MQ=60)

                                                                                         GGCAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAA      >  SRR4302543.6484552/1‑94 (MQ=60)

                                                                                           CAGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAAAA    >  SRR4302543.3840529/1‑94 (MQ=60)

                                                                                            AGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAAAAT   >  SRR4302543.4488475/1‑94 (MQ=60)

                                                                                            AGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAAAAT   >  SRR4302543.3634396/1‑94 (MQ=60)

                                                                                            AGCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAAAAT   <  SRR4302543.4796356/94‑1 (MQ=60)

                                                                                            AGCGCCTGATGGGGGAATACAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAAAAT   >  SRR4302543.4488476/1‑94 (MQ=60)

                                                                                             GCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAAAATC  <  SRR4302543.4218707/94‑1 (MQ=60)

                                                                                             GCGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAAAATC  <  SRR4302543.7086144/94‑1 (MQ=60)

CTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAACGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAAAATC  >  NC_000913/4406205‑4406391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`