Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,434,828	T→C	Y166H (TAT→CAT)	cysQ →	CysQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,434,828	0	T	C	99.5%	1184.7 / ‑5.4	376	Y166H (TAT→CAT)	cysQ	CysQ
Reads supporting (aligned to +/- strand): ref base T (0/2); new base C (160/213); total (161/215)
Fisher's exact test for biased strand distribution p-value = 5.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.07e-01

Only 100 of 382 total aligned reads displayed.

TGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGTATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTAC  >  NC_000913/4434738‑4434917

gggggTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCAt                                                                                         <  2:6075374/90‑1 (MQ=255)

ggCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCAt                                                                                         <  2:6749081/92‑1 (MQ=255)

ggCGGTGGCCGCAAGAAAATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCAt                                                                                         <  2:5800096/92‑1 (MQ=255)

 gCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATc                                                                                        >  2:7853190/1‑93 (MQ=255)

  cGGTGTGCGCAAGCAGATTCAGTTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCt                                                                                       <  1:820700/93‑1 (MQ=255)

  cGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCt                                                                                       >  2:5522984/1‑93 (MQ=255)

  cGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCt                                                                                       <  1:6263007/93‑1 (MQ=255)

   ggTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTg                                                                                      >  2:291286/1‑93 (MQ=255)

    gtgtGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGc                                                                                     >  2:3560617/1‑93 (MQ=255)

    gtgtGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGc                                                                                     <  1:490973/93‑1 (MQ=255)

      gtgCGCAAGCAGATTCAGGTCCGCGATGCGCCCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCaa                                                                                   <  1:134510/93‑1 (MQ=255)

        gcgcAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCACGCGGATGCGGAGCTGAAAGAGCATCTGCAACa                                                                                 <  2:6583999/93‑1 (MQ=255)

         cgcAAGCAGATTCGGGTCCGCGACGCGCCCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAg                                                                                <  2:649981/93‑1 (MQ=255)

         cccAAGCAGATTCGGGTCCGCGACGCGCCCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAg                                                                                <  2:2129287/91‑1 (MQ=255)

          gcAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGc                                                                               >  1:3429402/1‑93 (MQ=255)

          gcAAGCAGATTCAGGCCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGc                                                                               <  2:1517647/93‑1 (MQ=255)

           cAAGAAAATTCGGGCGCGCGATGCCCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCt                                                                              <  1:3885824/93‑1 (MQ=255)

            acgtaGATTCAGGCCCGCGAGCCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCtt                                                                             <  2:7317796/89‑1 (MQ=255)

            aaGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCtt                                                                             >  1:2290485/1‑93 (MQ=255)

             aGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTg                                                                            <  1:7568924/93‑1 (MQ=255)

              gCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTgg                                                                           >  1:2907847/1‑93 (MQ=255)

               cAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGc                                                                          >  2:4737351/1‑93 (MQ=255)

                aGATTCAGGCCCGGGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCg                                                                         <  1:780757/93‑1 (MQ=255)

                 gATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGa                                                                        <  2:536524/93‑1 (MQ=255)

                 gATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGa                                                                        >  1:3528903/1‑93 (MQ=255)

                  aTTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGaa                                                                       >  2:5477930/1‑93 (MQ=255)

                   ttCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAAc                                                                      >  2:2797429/1‑93 (MQ=255)

                   ttCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAAc                                                                      >  2:919752/1‑93 (MQ=255)

                    tcgggTCCGCGCTGCCCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACa                                                                     <  2:3192209/90‑1 (MQ=255)

                       ggTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCa                                                                  <  1:2089380/93‑1 (MQ=255)

                        gTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAg                                                                 <  2:7189097/93‑1 (MQ=255)

                          ccGGGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGAc                                                               <  1:1818894/93‑1 (MQ=255)

                          ccGCGATGCGCCCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGAc                                                               <  1:5648765/93‑1 (MQ=255)

                            gcgcTGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCa                                                             <  2:4481870/93‑1 (MQ=255)

                            gcgATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCa                                                             >  2:7834216/1‑93 (MQ=255)

                             cgATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCAc                                                            <  2:6446483/93‑1 (MQ=255)

                             cgATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCAc                                                            <  2:2592754/93‑1 (MQ=255)

                              gATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACg                                                           >  1:3132942/1‑93 (MQ=255)

                                tGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTc                                                         <  1:6890895/93‑1 (MQ=255)

                                     gcccgccGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCg                                                    <  1:1025019/93‑1 (MQ=255)

                                     gcccgccGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCg                                                    >  2:2312526/1‑93 (MQ=255)

                                     gcccgccGCTGGTGGTGATCAGCCGATCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCACCAGCTTGGCGAACATCAGACCACGTACATCg                                                    >  1:7745659/1‑93 (MQ=255)

                                     ccccgccGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCg                                                    <  2:1944420/92‑1 (MQ=255)

                                     ccccgccGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCg                                                    <  2:4889113/92‑1 (MQ=255)

                                           cgcTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCtt                                              >  2:5028522/1‑93 (MQ=255)

                                            gcTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTc                                             <  1:4848505/93‑1 (MQ=255)

                                            gcTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTc                                             <  1:282486/93‑1 (MQ=255)

                                             cTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGCACATCTGCTCTTCg                                            >  1:4554134/1‑93 (MQ=255)

                                              tggtggTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGc                                           >  2:6160509/1‑93 (MQ=255)

                                              tggtggTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGc                                           >  2:5072454/1‑93 (MQ=255)

                                               ggtggtGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCt                                          >  2:3732539/1‑93 (MQ=255)

                                               ggtggtGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCt                                          >  1:1471775/1‑93 (MQ=255)

                                                gtggtgATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTGCATCGGCCCCTCGCtc                                         >  2:1123827/1‑92 (MQ=255)

                                                 tggtgATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGa                                        >  2:7588905/1‑93 (MQ=255)

                                                  ggtgATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGaa                                       <  1:912222/93‑1 (MQ=255)

                                                   gtgATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGaaa                                      <  1:3225982/93‑1 (MQ=255)

                                                     gATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAAtt                                    >  1:6489584/1‑93 (MQ=255)

                                                      aTCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGGCCACGTCCATCGGCTCTTCGCTGAAATTc                                   <  2:3117773/93‑1 (MQ=255)

                                                      aTCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTc                                   <  1:7175616/93‑1 (MQ=255)

                                                      aTCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTc                                   <  1:6405801/93‑1 (MQ=255)

                                                      aTCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTc                                   <  1:5291663/93‑1 (MQ=255)

                                                        taGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCTAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTg                                 <  1:6790897/92‑1 (MQ=255)

                                                          gCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGcc                               <  2:7770174/93‑1 (MQ=255)

                                                          gCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGcc                               >  1:1184394/1‑93 (MQ=255)

                                                            cGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCAACCGGCTCTTCGCTGAAATcctgcctg                             >  1:7658661/1‑93 (MQ=255)

                                                            cGTGCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCtg                             <  2:3487086/93‑1 (MQ=255)

                                                             gTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCtgg                            <  1:3955066/93‑1 (MQ=255)

                                                             gTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCtgg                            <  2:384970/93‑1 (MQ=255)

                                                             gTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCtgg                            >  2:4645924/1‑93 (MQ=255)

                                                              ttCCCATGGGGATGCGGAACTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCtggt                           <  2:4056113/93‑1 (MQ=255)

                                                              ttCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCtggg                           >  1:1718365/1‑92 (MQ=255)

                                                               taccATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCtggtg                          >  2:4582228/3‑93 (MQ=255)

                                                                cccATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCtggtgg                         <  2:1008972/93‑1 (MQ=255)

                                                                 ccATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGc                        >  2:3156912/1‑93 (MQ=255)

                                                                 ccATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGc                        >  1:5516052/1‑93 (MQ=255)

                                                                  tatgcggatgcggTGCTGAAAGTGCATTTGCTACAGCTTGGCGAACTTTTGACCATTTCCATCGGCTCTTCGCTGAAATTTTGCCTGTCGGCg                       >  1:6038340/2‑93 (MQ=255)

                                                                    tgcggatgcggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGa                     >  1:5779946/1‑93 (MQ=255)

                                                                     gcggatgcggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGaa                    >  2:1331946/1‑93 (MQ=255)

                                                                     gcggatgcggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGaa                    <  1:4285768/93‑1 (MQ=255)

                                                                        gatgcggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGa                 <  1:541092/93‑1 (MQ=255)

                                                                        gatgcggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGa                 <  2:620869/93‑1 (MQ=255)

                                                                         atgcggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGAc                <  2:336022/93‑1 (MQ=255)

                                                                         atgcggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGAc                <  1:7412038/93‑1 (MQ=255)

                                                                          tgcggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACa               <  1:2700974/93‑1 (MQ=255)

                                                                          tgcggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACa               <  1:4729350/93‑1 (MQ=255)

                                                                          tgcggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAAGTCTGCCTGGTGGCGGAAGGACa               <  1:4218890/93‑1 (MQ=255)

                                                                           gcggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAg              >  1:36901/1‑93 (MQ=255)

                                                                           gcggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAg              <  1:3831263/93‑1 (MQ=255)

                                                                            cggaGCTGAAATAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAgg             <  2:6969714/93‑1 (MQ=255)

                                                                            cggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAgg             >  1:4989395/1‑93 (MQ=255)

                                                                             ggaGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGgc            <  2:1695238/93‑1 (MQ=255)

                                                                                   gAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGcg      >  2:4271567/1‑92 (MQ=255)

                                                                                    aaaGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTg     <  1:4471191/93‑1 (MQ=255)

                                                                                     aaGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGt    >  2:4393041/1‑93 (MQ=255)

                                                                                     aaGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGt    >  1:2525968/1‑93 (MQ=255)

                                                                                     aaGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGt    >  1:1943684/1‑93 (MQ=255)

                                                                                      agagCATCTGNAACAGCTTGGNGNACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTa   <  1:7051111/93‑1 (MQ=255)

                                                                                      agagCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTa   >  2:5255383/1‑93 (MQ=255)

                                                                                       gagCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTTGCGGAAGGACAGGCGCAGCTGTAc  >  2:5719787/1‑93 (MQ=255)

                                                                                       gagCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTAc  >  1:5584091/1‑93 (MQ=255)

TGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGTATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTAC  >  NC_000913/4434738‑4434917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 210 total aligned reads displayed.

GAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGTATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTACCC  >  NC_000913/4434735‑4434919

GAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGC                                                                                             >  SRR4302543.5779536/1‑94 (MQ=60)

GAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGC                                                                                             <  SRR4302543.3770231/94‑1 (MQ=60)

GAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGC                                                                                             >  SRR4302543.1688123/1‑94 (MQ=60)

GAGTGCGGGGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGC                                                                                             <  SRR4302543.6767674/94‑1 (MQ=60)

 AGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCGCATGCGGATGCGGAGCTGAAAGAGGA                                                                                            >  SRR4302543.5649351/1‑94 (MQ=60)

 AGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCA                                                                                            >  SRR4302543.5650579/1‑94 (MQ=60)

 AGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCA                                                                                            >  SRR4302543.786571/1‑94 (MQ=60)

  GTGCGGTTGGCGCAAGCAGATTCAGGCCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCAT                                                                                           <  SRR4302543.3195610/94‑1 (MQ=60)

  GTGCGGTGTGCGCAAGCAGTTTCAGGTCCGCCATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCAT                                                                                           <  SRR4302543.5566638/94‑1 (MQ=60)

  GTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCAT                                                                                           <  SRR4302543.1253053/94‑1 (MQ=60)

   ggcgcggtgctaAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATC                                                                                          <  SRR4302543.5707680/82‑1 (MQ=60)

    GCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCT                                                                                         <  SRR4302543.1368053/94‑1 (MQ=60)

     CGGTGTGCGCAAGCAGATTCAGTTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTG                                                                                        <  SRR4302543.827926/94‑1 (MQ=60)

     CGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTG                                                                                        >  SRR4302543.5120715/1‑94 (MQ=60)

     CGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTG                                                                                        >  SRR4302543.3536250/1‑94 (MQ=60)

     CGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTG                                                                                        <  SRR4302543.4638253/94‑1 (MQ=60)

     CGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTG                                                                                        <  SRR4302543.6322066/94‑1 (MQ=60)

      ggttgGCGCAAGCAGATTCAGGTCCGCGATTCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGC                                                                                       <  SRR4302543.1531582/89‑1 (MQ=60)

      GGTGTGCGCAAGGAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGC                                                                                       >  SRR4302543.2744545/1‑94 (MQ=60)

       GTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCA                                                                                      <  SRR4302543.495508/94‑1 (MQ=60)

       GTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCA                                                                                      >  SRR4302543.5531158/1‑94 (MQ=60)

        TGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAA                                                                                     >  SRR4302543.1784339/1‑94 (MQ=60)

        TGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAA                                                                                     <  SRR4302543.4917822/94‑1 (MQ=60)

         GTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAAC                                                                                    >  SRR4302543.4894019/1‑94 (MQ=60)

         GTGCGCAAGCAGATTCAGGTCCGCGATGCGCCCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAAC                                                                                    <  SRR4302543.135702/94‑1 (MQ=60)

         GGGCGCAAGCAGATTCAGGCCCGGGAGGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAAC                                                                                    <  SRR4302543.1149967/94‑1 (MQ=60)

          TGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACA                                                                                   <  SRR4302543.2626900/94‑1 (MQ=60)

           GCCCAAGAAGATTCAGGCCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAG                                                                                  <  SRR4302543.6268087/94‑1 (MQ=60)

            CGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGC                                                                                 >  SRR4302543.3460087/1‑94 (MQ=60)

            CGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGC                                                                                 >  SRR4302543.5416799/1‑94 (MQ=60)

            CGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGC                                                                                 <  SRR4302543.5040065/94‑1 (MQ=60)

              caggaagagtcaggccggcgaggcgccCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTT                                                                               <  SRR4302543.6442165/67‑1 (MQ=60)

              cacaCAGATTCAGGCCCGGGATGCCCGCCCGCCGCTCGCGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTT                                                                               <  SRR4302543.1691731/90‑1 (MQ=60)

              caagaaaattcgggcgCGCGATGCCCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTT                                                                               <  SRR4302543.3920129/78‑1 (MQ=60)

              CAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAcaagctg                                                                               >  SRR4302543.3223706/1‑87 (MQ=60)

              CAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTT                                                                               >  SRR4302543.2311393/1‑94 (MQ=60)

              CAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTT                                                                               >  SRR4302543.7079134/1‑94 (MQ=60)

              CAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTT                                                                               >  SRR4302543.2010981/1‑94 (MQ=60)

              CAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTT                                                                               <  SRR4302543.6442160/94‑1 (MQ=60)

              CAAGCAAATTCAGGCCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTT                                                                               <  SRR4302543.1235089/94‑1 (MQ=60)

               aagtagatccaggcccgagcTGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTG                                                                              <  SRR4302543.3545828/74‑1 (MQ=60)

               AAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTTATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTG                                                                              >  SRR4302543.2865376/1‑94 (MQ=60)

               AAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGGGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTG                                                                              >  SRR4302543.1673406/1‑94 (MQ=60)

               AAGAAAATTCAGGCCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTG                                                                              <  SRR4302543.5704596/94‑1 (MQ=60)

                AGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGG                                                                             <  SRR4302543.7640935/94‑1 (MQ=60)

                AGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGG                                                                             >  SRR4302543.2934281/1‑94 (MQ=60)

                 GCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGC                                                                            <  SRR4302543.6492417/94‑1 (MQ=60)

                  CAGGTTCGGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCG                                                                           <  SRR4302543.3834080/94‑1 (MQ=60)

                  CAGATTCTGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCG                                                                           >  SRR4302543.2220068/1‑94 (MQ=60)

                  CAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGcgc                                                                           >  SRR4302543.306905/1‑91 (MQ=60)

                   agagtcagtcCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGA                                                                          <  SRR4302543.6977692/84‑1 (MQ=60)

                   AGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGA                                                                          >  SRR4302543.1157265/1‑94 (MQ=60)

                   AGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGA                                                                          >  SRR4302543.3560344/1‑94 (MQ=60)

                   AGATTCAGGCCCGGGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGA                                                                          <  SRR4302543.787620/94‑1 (MQ=60)

                    GATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGAATCTGCAACAGCTTGGCGAA                                                                         >  SRR4302543.4184305/1‑94 (MQ=60)

                     ATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAAC                                                                        <  SRR4302543.559621/94‑1 (MQ=60)

                     ATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAAC                                                                        <  SRR4302543.7148247/94‑1 (MQ=60)

                      TTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACA                                                                       >  SRR4302543.5544905/1‑94 (MQ=60)

                       TCGGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACAT                                                                      <  SRR4302543.1483180/94‑1 (MQ=60)

                       TCAGGTCCGCGATGCGCCCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACAT                                                                      <  SRR4302543.7640057/94‑1 (MQ=60)

                         AGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCA                                                                    >  SRR4302543.7134822/1‑94 (MQ=60)

                         AGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCA                                                                    >  SRR4302543.4636538/1‑94 (MQ=60)

                         AGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGACACAGCTTGGCGACCATCA                                                                    >  SRR4302543.6889548/1‑94 (MQ=60)

                          GGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAG                                                                   <  SRR4302543.2108049/94‑1 (MQ=60)

                           GTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGA                                                                  >  SRR4302543.7154457/1‑94 (MQ=60)

                            TCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGAC                                                                 >  SRR4302543.7488730/1‑94 (MQ=60)

                             ccgcgagcccCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGTGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACC                                                                <  SRR4302543.331467/84‑1 (MQ=60)

                             cccctatgccCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACC                                                                <  SRR4302543.4639018/84‑1 (MQ=60)

                             CCGGGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACC                                                                <  SRR4302543.1835211/94‑1 (MQ=60)

                             CCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACC                                                                <  SRR4302543.4476086/94‑1 (MQ=60)

                             CCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACC                                                                <  SRR4302543.4639017/94‑1 (MQ=60)

                             CCGCGATGCGCCCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACC                                                                <  SRR4302543.5700262/94‑1 (MQ=60)

                              CGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCA                                                               <  SRR4302543.4257386/94‑1 (MQ=60)

                               GCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCAC                                                              <  SRR4302543.7826661/94‑1 (MQ=60)

                               GCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCAC                                                              <  SRR4302543.3947721/94‑1 (MQ=60)

                                CGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACG                                                             >  SRR4302543.3161119/1‑94 (MQ=60)

                                   TGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCC                                                          <  SRR4302543.6955686/94‑1 (MQ=60)

                                   GGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCC                                                          <  SRR4302543.4834090/94‑1 (MQ=60)

                                     CGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCAT                                                        >  SRR4302543.6547047/1‑94 (MQ=60)

                                     CGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCAT                                                        <  SRR4302543.4293067/94‑1 (MQ=60)

                                     CGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCAT                                                        <  SRR4302543.2342262/94‑1 (MQ=60)

                                      GCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATC                                                       <  SRR4302543.7457201/94‑1 (MQ=60)

                                       CGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGCCCACGTCCATCG                                                      <  SRR4302543.4565240/94‑1 (MQ=60)

                                       CGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCG                                                      <  SRR4302543.1832774/94‑1 (MQ=60)

                                       CGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCG                                                      >  SRR4302543.7818817/1‑94 (MQ=60)

                                       CGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCG                                                      <  SRR4302543.3053005/94‑1 (MQ=60)

                                       CGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCG                                                      <  SRR4302543.7501345/94‑1 (MQ=60)

                                       CGCCCGCCGCTGGTGGTGATCAGCCGATCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCACCAGCTTGGCGAACATCAGACCACGTACATCG                                                      >  SRR4302543.7818818/1‑94 (MQ=60)

                                        GCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGG                                                     <  SRR4302543.1034096/94‑1 (MQ=60)

                                        GCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGG                                                     <  SRR4302543.3746802/94‑1 (MQ=60)

                                         CCCGCCGCTGGTGGTGATCTGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGC                                                    <  SRR4302543.7767972/94‑1 (MQ=60)

                                          CCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCT                                                   <  SRR4302543.809091/94‑1 (MQ=60)

                                            GCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCGCGTCTCTCGGCTCT                                                 >  SRR4302543.6555716/1‑94 (MQ=60)

                                             CCGCTGGTGGTGCTCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCACCAGCTTGGCGAAAATCAGACCAAGTCCATCGGCTCTT                                                <  SRR4302543.1226045/94‑1 (MQ=60)

                                              CGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTC                                               <  SRR4302543.838264/94‑1 (MQ=60)

                                              CGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTC                                               >  SRR4302543.125348/1‑94 (MQ=60)

                                              CGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTC                                               <  SRR4302543.3253024/94‑1 (MQ=60)

                                              CGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTC                                               >  SRR4302543.2775726/1‑94 (MQ=60)

                                              CGCTGGTGGTGATCACACGTTCCCATGGTGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTC                                               <  SRR4302543.838265/94‑1 (MQ=60)

                                               GCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCG                                              >  SRR4302543.4595601/1‑94 (MQ=60)

                                               GCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCG                                              <  SRR4302543.7651693/94‑1 (MQ=60)

                                               GCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCG                                              <  SRR4302543.7340144/94‑1 (MQ=60)

                                               GCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCG                                              <  SRR4302543.4892719/94‑1 (MQ=60)

                                               GCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCG                                              <  SRR4302543.284994/94‑1 (MQ=60)

                                               GCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGCACATCTGCTCTTCG                                              >  SRR4302543.4595603/1‑94 (MQ=60)

                                                 TGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCT                                            >  SRR4302543.1485032/1‑94 (MQ=60)

                                                   GTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGA                                          >  SRR4302543.319877/1‑94 (MQ=60)

                                                     GGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAA                                        <  SRR4302543.920235/94‑1 (MQ=60)

                                                      GTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAAT                                       <  SRR4302543.7877770/94‑1 (MQ=60)

                                                      GTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAAT                                       >  SRR4302543.1504060/1‑94 (MQ=60)

                                                      GTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAAT                                       <  SRR4302543.3255147/94‑1 (MQ=60)

                                                       TGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATT                                      <  SRR4302543.5692319/94‑1 (MQ=60)

                                                       TGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATT                                      >  SRR4302543.5864888/1‑94 (MQ=60)

                                                       TGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATT                                      >  SRR4302543.6550723/1‑94 (MQ=60)

                                                       TGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATT                                      >  SRR4302543.2066227/1‑94 (MQ=60)

                                                         ATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCT                                    <  SRR4302543.5339440/94‑1 (MQ=60)

                                                         ATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCT                                    <  SRR4302543.6466129/94‑1 (MQ=60)

                                                         ATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCT                                    <  SRR4302543.1140358/94‑1 (MQ=60)

                                                         ATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCT                                    >  SRR4302543.6185852/1‑94 (MQ=60)

                                                         ATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCT                                    <  SRR4302543.7245279/94‑1 (MQ=60)

                                                         ATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCT                                    <  SRR4302543.7301084/94‑1 (MQ=60)

                                                         ATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCT                                    >  SRR4302543.189245/1‑94 (MQ=60)

                                                          TCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTG                                   <  SRR4302543.2456574/94‑1 (MQ=60)

                                                          TCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTG                                   >  SRR4302543.1737382/1‑94 (MQ=60)

                                                           TAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCTAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGC                                  <  SRR4302543.6855024/94‑1 (MQ=60)

                                                            AGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCC                                 <  SRR4302543.2237976/94‑1 (MQ=60)

                                                            AGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCC                                 <  SRR4302543.1877881/94‑1 (MQ=60)

                                                            AGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCC                                 >  SRR4302543.1195087/1‑94 (MQ=60)

                                                            AGCAGATCCCATGCGGATGCGGAGCTGAAAAAACAACTAAAAAAGCTTAGCGAACATCAGACAACGTCCATCGGCTCTACGCTGAAATTCTGCC                                 <  SRR4302543.7088297/94‑1 (MQ=30)

                                                             GCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCT                                >  SRR4302543.6356850/1‑94 (MQ=60)

                                                             GCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCT                                <  SRR4302543.964532/94‑1 (MQ=60)

                                                             GCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCT                                <  SRR4302543.2772203/94‑1 (MQ=60)

                                                             GCCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCT                                <  SRR4302543.3787729/94‑1 (MQ=60)

                                                              CCGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCAACCGGCTCTTCGCTGAAATCCTGCCTG                               >  SRR4302543.7731259/1‑94 (MQ=60)

                                                               CGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGG                              >  SRR4302543.934490/1‑94 (MQ=60)

                                                               CGTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGG                              <  SRR4302543.3910882/94‑1 (MQ=60)

                                                                GTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGT                             >  SRR4302543.2131803/1‑94 (MQ=60)

                                                                GTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGT                             >  SRR4302543.3867659/1‑94 (MQ=60)

                                                                GTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGT                             >  SRR4302543.5344265/1‑94 (MQ=60)

                                                                GTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGT                             <  SRR4302543.3990068/94‑1 (MQ=60)

                                                                GTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGT                             >  SRR4302543.2097137/1‑94 (MQ=60)

                                                                GTTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGT                             >  SRR4302543.4296723/1‑94 (MQ=60)

                                                                 TTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTG                            <  SRR4302543.5633758/94‑1 (MQ=60)

                                                                 TTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTG                            <  SRR4302543.36902/94‑1 (MQ=60)

                                                                 TTCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTG                            <  SRR4302543.4935456/94‑1 (MQ=60)

                                                                  TCCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGG                           <  SRR4302543.5000475/94‑1 (MQ=60)

                                                                   CCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTGCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGC                          >  SRR4302543.5566150/1‑94 (MQ=60)

                                                                   CCCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGC                          >  SRR4302543.5566149/1‑94 (MQ=60)

                                                                    CTATGCGGATGCGGTGCTGAAAGTGCATTTGCTACAGCTTGGCGAACTTTTGACCATTTCCATCGGCTCTTCGCTGAAATTTTGCCTGTCGGCG                         >  SRR4302543.6095473/1‑94 (MQ=18)

                                                                    CCATGCGGATGCGGAGCTGAAAGAGCATCTGCACCAGCTTGGCGAACATCACACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCG                         >  SRR4302543.6095472/1‑94 (MQ=60)

                                                                    CCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGACATTCTGCCTGGTGGCG                         >  SRR4302543.4229038/1‑94 (MQ=60)

                                                                    CCATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCG                         <  SRR4302543.3917324/94‑1 (MQ=60)

                                                                      ATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGA                       >  SRR4302543.7986904/1‑94 (MQ=60)

                                                                      ATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGA                       >  SRR4302543.5058537/1‑94 (MQ=60)

                                                                      ATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGA                       >  SRR4302543.7986905/1‑94 (MQ=60)

                                                                      ATGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGA                       >  SRR4302543.5832550/1‑94 (MQ=60)

                                                                       TGCGGATGCGGAGCTGAAAGAGCCTCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGCA                      <  SRR4302543.7112350/94‑1 (MQ=60)

                                                                       TGCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAA                      <  SRR4302543.6252538/94‑1 (MQ=60)

                                                                        GCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAG                     <  SRR4302543.290811/94‑1 (MQ=60)

                                                                        GCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAG                     >  SRR4302543.3964160/1‑94 (MQ=60)

                                                                        GCGGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAG                     <  SRR4302543.4324719/94‑1 (MQ=60)

                                                                          GGATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGA                   >  SRR4302543.5738630/1‑94 (MQ=60)

                                                                           GATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGAC                  <  SRR4302543.1357493/94‑1 (MQ=60)

                                                                           GATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGAC                  <  SRR4302543.56734/94‑1 (MQ=60)

                                                                           GATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGAC                  <  SRR4302543.56733/94‑1 (MQ=60)

                                                                           GATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGAC                  <  SRR4302543.5790904/94‑1 (MQ=60)

                                                                           GATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGAC                  <  SRR4302543.546099/94‑1 (MQ=60)

                                                                            ATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACA                 >  SRR4302543.7826321/1‑94 (MQ=60)

                                                                            ATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACA                 <  SRR4302543.3369772/94‑1 (MQ=60)

                                                                            ATGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACA                 <  SRR4302543.7483159/94‑1 (MQ=60)

                                                                             TGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAG                <  SRR4302543.4257137/94‑1 (MQ=60)

                                                                             TGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAG                <  SRR4302543.913782/94‑1 (MQ=60)

                                                                             TGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAG                <  SRR4302543.2725473/94‑1 (MQ=60)

                                                                             TGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAG                >  SRR4302543.37239/1‑94 (MQ=60)

                                                                             TGCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAAGTCTGCCTGGTGGCGGAAGGACAG                <  SRR4302543.4257138/94‑1 (MQ=60)

                                                                              GCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGG               <  SRR4302543.3865058/94‑1 (MQ=60)

                                                                              GCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGG               <  SRR4302543.7742373/94‑1 (MQ=60)

                                                                              GCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGG               <  SRR4302543.5017058/94‑1 (MQ=60)

                                                                              GCGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGG               >  SRR4302543.5034817/1‑94 (MQ=60)

                                                                               CGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGC              >  SRR4302543.36133/1‑94 (MQ=60)

                                                                               CGGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGC              >  SRR4302543.2363080/1‑94 (MQ=60)

                                                                                GGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACggggg             >  SRR4302543.6578369/1‑89 (MQ=60)

                                                                                GGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCG             >  SRR4302543.3532540/1‑94 (MQ=60)

                                                                                GGAGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCG             >  SRR4302543.6363007/1‑94 (MQ=60)

                                                                                  AGCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCA           >  SRR4302543.5388579/1‑94 (MQ=60)

                                                                                   GCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAG          <  SRR4302543.4823146/94‑1 (MQ=60)

                                                                                   GCTGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAG          <  SRR4302543.4823139/94‑1 (MQ=60)

                                                                                     TGAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCT        >  SRR4302543.4467995/1‑94 (MQ=60)

                                                                                      GAAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTG       <  SRR4302543.6906161/94‑1 (MQ=60)

                                                                                       AAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGT      >  SRR4302543.1961140/1‑94 (MQ=60)

                                                                                       AAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGT      >  SRR4302543.2548944/1‑94 (MQ=60)

                                                                                       AAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGT      <  SRR4302543.1608323/94‑1 (MQ=60)

                                                                                       AAAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGT      <  SRR4302543.4511742/94‑1 (MQ=60)

                                                                                        AAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTA     >  SRR4302543.2627949/1‑94 (MQ=60)

                                                                                        AAGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTA     >  SRR4302543.2970008/1‑94 (MQ=60)

                                                                                         AGAGCATCTGNAACAGCTTGGNGNACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTAC    <  SRR4302543.7119534/94‑1 (MQ=60)

                                                                                         AGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTAC    >  SRR4302543.4546568/1‑94 (MQ=60)

                                                                                         AGAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTAC    >  SRR4302543.5634949/1‑94 (MQ=60)

                                                                                          GAGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTACC   <  SRR4302543.6542216/94‑1 (MQ=60)

                                                                                           AGCATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTACCC  <  SRR4302543.2160661/94‑1 (MQ=60)

GAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGTATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTACCC  >  NC_000913/4434735‑4434919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`