Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,474,882 |
C→T |
T331T (ACG→ACA) |
argI ← |
ornithine carbamoyltransferase 1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,474,882 | 0 | C | T | 99.7%
| 1327.3
/ ‑6.5
| 369 | T331T (ACG→ACA) | argI | ornithine carbamoyltransferase 1 |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (179/189); total (180/189) |
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 372 total aligned reads displayed.
TTTGGGTGGAAGAATAGACCTATCACTGCATAAATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGT > NC_000913/4474793‑4474971
|
gaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTc > 1:6413959‑M2/77‑93 (MQ=255)
gaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTc < 1:2919722‑M2/17‑1 (MQ=255)
aatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTcg > 1:5623220‑M2/76‑93 (MQ=255)
atagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTcgc > 2:6115407‑M2/75‑93 (MQ=255)
gacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGAc > 2:3170660‑M2/72‑93 (MQ=255)
gacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGAc < 1:844464‑M2/22‑1 (MQ=255)
tatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATc > 1:3236754‑M2/68‑93 (MQ=255)
cactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCAcc < 1:7719138‑M2/29‑1 (MQ=255)
actgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCg > 2:7193005‑M2/64‑93 (MQ=255)
tgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCt > 2:5525724‑M2/62‑93 (MQ=255)
cataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCttt > 1:4403425‑M2/60‑93 (MQ=255)
taaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGa > 2:7087005‑M2/58‑93 (MQ=255)
aaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATa > 1:596597‑M2/56‑93 (MQ=255)
aataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAg < 2:3447556‑M2/39‑1 (MQ=255)
aataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAg > 2:2276923‑M2/55‑93 (MQ=255)
ataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGt > 1:602484‑M2/54‑93 (MQ=255)
taatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTa < 2:180878‑M2/41‑1 (MQ=255)
taatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTa < 1:4815758‑M2/41‑1 (MQ=255)
aatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTAt < 1:7509494‑M2/42‑1 (MQ=255)
atgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATg > 2:2921437‑M2/51‑93 (MQ=255)
atgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATg > 1:1435096‑M2/51‑93 (MQ=255)
tgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGc < 1:2797023‑M2/44‑1 (MQ=255)
gtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCa < 2:7780298‑M2/45‑1 (MQ=255)
gtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCa > 1:5411140‑M2/49‑93 (MQ=255)
tgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAt < 2:7622051‑M2/46‑1 (MQ=255)
gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATa < 2:2431903‑M2/47‑1 (MQ=255)
tgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACg > 1:351609‑M2/45‑93 (MQ=255)
gccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACgg > 2:7631111‑M2/44‑93 (MQ=255)
ccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGt < 1:3646751‑M2/51‑1 (MQ=255)
ccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGt > 1:6635967‑M2/43‑93 (MQ=255)
ccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGt < 1:4084892‑M2/51‑1 (MQ=255)
cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtt < 2:6494900‑M2/52‑1 (MQ=255)
cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtt < 2:700006‑M2/52‑1 (MQ=255)
ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtttt > 2:2172915‑M2/40‑93 (MQ=255)
ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtttt < 1:5710998‑M2/54‑1 (MQ=255)
ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtttt > 2:7901660‑M2/40‑93 (MQ=255)
gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTc < 1:5125522‑M2/55‑1 (MQ=255)
gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTc < 1:3326188‑M2/55‑1 (MQ=255)
gatggtttgtatttcccggcatctttatagcgatagcaATTATCTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTc < 1:7314074‑M2/55‑1 (MQ=255)
tggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCg > 2:6222657‑M2/37‑93 (MQ=255)
gtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGcc > 1:4874696‑M2/35‑93 (MQ=255)
gtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGcc > 1:2602927‑M2/35‑93 (MQ=255)
tgtatttctcggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCACCTGa < 1:7790948‑M2/62‑1 (MQ=255)
gtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGAt > 2:125763‑M2/31‑93 (MQ=255)
tatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATc > 1:4989216‑M2/30‑93 (MQ=255)
tatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATc > 1:1994896‑M2/30‑93 (MQ=255)
tatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATc > 1:2204827‑M2/30‑93 (MQ=255)
tatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATc < 1:975342‑M2/64‑1 (MQ=255)
cccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCaaaaa < 2:6454776‑M2/69‑1 (MQ=255)
ccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAAc < 1:3918686‑M2/70‑1 (MQ=255)
ccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAAc < 2:577846‑M2/70‑1 (MQ=255)
cggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACa > 2:1665511‑M2/23‑93 (MQ=255)
ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACaa > 2:1360694‑M2/22‑93 (MQ=255)
ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACaa < 1:2735140‑M2/72‑1 (MQ=255)
ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACaa < 1:3063590‑M2/72‑1 (MQ=255)
catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATg < 1:1055698‑M2/74‑1 (MQ=255)
catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATg > 1:5824766‑M2/20‑93 (MQ=255)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGc > 2:1611057‑M2/19‑93 (MQ=255)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGc > 2:110714‑M2/19‑93 (MQ=255)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt > 2:3738933‑M2/18‑93 (MQ=255)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt < 2:3850696‑M2/76‑1 (MQ=255)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt > 2:5285361‑M2/18‑93 (MQ=255)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt < 2:914674‑M2/76‑1 (MQ=255)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt > 1:7198571‑M2/18‑93 (MQ=255)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt > 1:1580584‑M2/18‑93 (MQ=255)
ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTg > 2:2549860‑M2/17‑93 (MQ=255)
tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTgg > 2:3074951‑M2/16‑93 (MQ=255)
tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTgg < 1:1373830‑M2/78‑1 (MQ=255)
ttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTggc < 2:5570731‑M2/79‑1 (MQ=255)
ttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTggc < 1:811900‑M2/79‑1 (MQ=255)
tatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTggcg < 2:472853‑M2/80‑1 (MQ=255)
gcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAg > 2:4116866‑M2/10‑93 (MQ=255)
cgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGa < 2:4822300‑M2/85‑1 (MQ=255)
gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAt < 2:1992607‑M2/86‑1 (MQ=255)
gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAt > 2:7238101‑M2/8‑93 (MQ=255)
gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAt < 1:2462623‑M2/86‑1 (MQ=255)
atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAtt < 2:5669142‑M2/87‑1 (MQ=255)
tagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTc > 2:6828044‑M2/6‑93 (MQ=255)
caATTATTTACTGAGTGTCGCGATCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGaa < 2:4273802‑M2/91‑1 (MQ=255)
caATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGaa < 2:4491817‑M2/91‑1 (MQ=255)
aATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAg < 2:5425841‑M2/92‑1 (MQ=255)
aATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAg < 1:1725‑M2/92‑1 (MQ=255)
aATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAg > 1:1108859‑M2/2‑93 (MQ=255)
attattTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGa > 2:5207248/1‑93 (MQ=255)
attattTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGa < 2:5484764/93‑1 (MQ=255)
ttattTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAc > 1:382479/1‑93 (MQ=255)
ttattTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAc < 1:7887127/93‑1 (MQ=255)
tttACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtc < 1:6244039/93‑1 (MQ=255)
tttACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtc > 1:6859474/1‑93 (MQ=255)
tttACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtc > 2:7416779/1‑93 (MQ=255)
ttACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtca < 1:461471/93‑1 (MQ=255)
ttACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtca > 2:2995902/1‑93 (MQ=255)
tACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcat > 2:2672086/1‑93 (MQ=255)
aCTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcatc > 1:4558068/1‑93 (MQ=255)
aCTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcatc < 1:7139752/93‑1 (MQ=255)
aCTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcatc < 1:3606514/93‑1 (MQ=255)
aCTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcatc > 1:873174/1‑93 (MQ=255)
cTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcatca > 2:2829227/1‑93 (MQ=255)
tGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAg < 2:4999045/93‑1 (MQ=255)
tGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAg > 2:3373996/1‑93 (MQ=255)
|
TTTGGGTGGAAGAATAGACCTATCACTGCATAAATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGT > NC_000913/4474793‑4474971
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACCTATCACTGCAT‑AAATAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACT > NC_000913/4474809‑4474975
|
GACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACC < SRR4302543.3118758/94‑1 (MQ=21)
GACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACC < SRR4302543.851944/94‑1 (MQ=21)
CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC > SRR4302543.7776263/1‑94 (MQ=16)
CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC > SRR4302543.3266033/1‑94 (MQ=16)
CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC < SRR4302543.2757877/94‑1 (MQ=16)
CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC > SRR4302543.1426244/1‑94 (MQ=16)
CTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCT > SRR4302543.3645443/1‑94 (MQ=16)
CTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCT > SRR4302543.4569656/1‑94 (MQ=16)
CTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCT > SRR4302543.7979933/1‑94 (MQ=16)
TGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTT > SRR4302543.3541283/1‑94 (MQ=18)
TGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTT < SRR4302543.4890165/94‑1 (MQ=18)
GCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTT > SRR4302543.4443342/1‑94 (MQ=19)
GCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTT > SRR4302543.6958130/1‑94 (MQ=19)
GCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTT < SRR4302543.5431335/94‑1 (MQ=19)
ataAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGA > SRR4302543.972912/4‑94 (MQ=23)
taAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGAT > SRR4302543.861384/3‑94 (MQ=25)
taAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGAT < SRR4302543.4620595/92‑1 (MQ=25)
A‑AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATA > SRR4302543.1439426/1‑94 (MQ=26)
A‑AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATA > SRR4302543.602067/1‑94 (MQ=26)
AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG > SRR4302543.7877603/1‑94 (MQ=28)
AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG < SRR4302543.7533058/94‑1 (MQ=28)
AATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT < SRR4302543.2810209/94‑1 (MQ=28)
AATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT > SRR4302543.3001623/1‑94 (MQ=28)
AATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT > SRR4302543.608000/1‑94 (MQ=28)
AATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT > SRR4302543.4774461/1‑94 (MQ=28)
ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTA < SRR4302543.5723611/94‑1 (MQ=28)
ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTA > SRR4302543.5813870/1‑94 (MQ=28)
TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTAT < SRR4302543.4865326/94‑1 (MQ=28)
TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTAT < SRR4302543.4859727/94‑1 (MQ=28)
TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTAT > SRR4302543.942892/1‑94 (MQ=28)
TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTAT < SRR4302543.2744330/94‑1 (MQ=28)
TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGAACATCACCGCTTTGATAGTAT > SRR4302543.5144332/1‑94 (MQ=19)
AATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATG < SRR4302543.7581247/94‑1 (MQ=30)
AATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATG > SRR4302543.1448068/1‑94 (MQ=30)
ATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGC > SRR4302543.5815238/1‑94 (MQ=32)
ATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGC > SRR4302543.3265521/1‑94 (MQ=32)
ATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGC < SRR4302543.6102712/94‑1 (MQ=32)
ATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGC < SRR4302543.6102713/94‑1 (MQ=32)
ATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGC > SRR4302543.7213912/1‑94 (MQ=32)
TGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCA < SRR4302543.2822586/94‑1 (MQ=34)
TGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCA > SRR4302543.5460354/1‑94 (MQ=34)
GTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAT < SRR4302543.5592648/94‑1 (MQ=36)
GTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAT < SRR4302543.1837440/94‑1 (MQ=36)
GTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAT > SRR4302543.2551165/1‑94 (MQ=36)
tgatgccgcgatggtttgtattgcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATA < SRR4302543.3124796/47‑1 (MQ=60)
gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATAC < SRR4302543.213886/48‑1 (MQ=60)
atgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACG < SRR4302543.791167/49‑1 (MQ=60)
atgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACG > SRR4302543.354860/46‑94 (MQ=60)
atgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACG < SRR4302543.2429752/49‑1 (MQ=60)
atgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACG < SRR4302543.6889895/49‑1 (MQ=60)
tgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGG < SRR4302543.3610124/50‑1 (MQ=60)
gccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGT > SRR4302543.6698585/44‑94 (MQ=60)
gccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGT > SRR4302543.4190678/44‑94 (MQ=60)
ccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTT < SRR4302543.2978715/52‑1 (MQ=60)
ccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTT < SRR4302543.3678813/52‑1 (MQ=60)
ccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTT < SRR4302543.4121516/52‑1 (MQ=60)
ccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTT < SRR4302543.947208/52‑1 (MQ=60)
cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT > SRR4302543.7852374/42‑94 (MQ=60)
cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT < SRR4302543.1832776/53‑1 (MQ=60)
cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT > SRR4302543.833586/42‑94 (MQ=60)
gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTT < SRR4302543.85584/54‑1 (MQ=60)
gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTT > SRR4302543.2895194/41‑94 (MQ=60)
gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCACCACCGCTTTGATAGTATGCATACGGTTTT > SRR4302543.7569293/41‑94 (MQ=60)
ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTC > SRR4302543.3933563/40‑94 (MQ=60)
ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTC < SRR4302543.5763097/55‑1 (MQ=60)
ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTC > SRR4302543.110591/40‑94 (MQ=60)
gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCC < SRR4302543.5171859/56‑1 (MQ=60)
gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCC < SRR4302543.584963/56‑1 (MQ=60)
gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCC < SRR4302543.1622014/56‑1 (MQ=60)
gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCC < SRR4302543.3356191/56‑1 (MQ=60)
gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCC < SRR4302543.3356190/56‑1 (MQ=60)
gatggtttgtatttcccggcatctttatagcgatagcaATTATCTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCC < SRR4302543.7384561/56‑1 (MQ=60)
atggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCG < SRR4302543.4932491/57‑1 (MQ=60)
tggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGC < SRR4302543.3920528/58‑1 (MQ=60)
ggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCC > SRR4302543.4687766/36‑94 (MQ=60)
ggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCC > SRR4302543.4919128/36‑94 (MQ=60)
ggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCC > SRR4302543.666973/36‑94 (MQ=60)
ggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCC > SRR4302543.2626569/36‑94 (MQ=60)
gtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCT < SRR4302543.82992/60‑1 (MQ=60)
gtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGGTTTCCGCCT > SRR4302543.7378303/35‑94 (MQ=60)
tgtatttctcggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCACCTGAT < SRR4302543.7864378/63‑1 (MQ=60)
tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGAT < SRR4302543.5705176/63‑1 (MQ=60)
tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGAT > SRR4302543.7849142/32‑94 (MQ=60)
gtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATC > SRR4302543.5034637/31‑94 (MQ=60)
gtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATC > SRR4302543.2012785/31‑94 (MQ=60)
gtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATC > SRR4302543.2224674/31‑94 (MQ=60)
gtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATC < SRR4302543.2858635/64‑1 (MQ=60)
tatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCA < SRR4302543.4793274/65‑1 (MQ=60)
tatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCA < SRR4302543.983937/65‑1 (MQ=60)
atttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAA > SRR4302543.1504242/29‑94 (MQ=60)
atttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAA > SRR4302543.5090284/29‑94 (MQ=60)
tcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAA < SRR4302543.4495137/69‑1 (MQ=60)
ccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACA < SRR4302543.3953269/71‑1 (MQ=60)
ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT < SRR4302543.2760027/73‑1 (MQ=60)
ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT < SRR4302543.3091146/73‑1 (MQ=60)
ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT > SRR4302543.5030203/22‑94 (MQ=60)
gcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGTTCCAAAACAATC > SRR4302543.5497934/21‑94 (MQ=60)
gcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATG > SRR4302543.5877736/21‑94 (MQ=60)
catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGC < SRR4302543.1065173/75‑1 (MQ=60)
catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGC < SRR4302543.1673875/75‑1 (MQ=60)
catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGC < SRR4302543.3553572/75‑1 (MQ=60)
catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGC < SRR4302543.3553573/75‑1 (MQ=60)
catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGC > SRR4302543.4346823/20‑94 (MQ=60)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT > SRR4302543.7268365/19‑94 (MQ=60)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT > SRR4302543.1594689/19‑94 (MQ=60)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT > SRR4302543.219398/19‑94 (MQ=60)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT > SRR4302543.1594690/19‑94 (MQ=60)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT > SRR4302543.5552837/19‑94 (MQ=60)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTG < SRR4302543.6021206/77‑1 (MQ=60)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTG < SRR4302543.663453/77‑1 (MQ=60)
ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTGCCGCCTGATCAAAAACAATGCTGG < SRR4302543.277554/78‑1 (MQ=60)
ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGGTTTCCGCCTGATCAAAAACAATGCTGG > SRR4302543.5932605/17‑94 (MQ=60)
tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGC < SRR4302543.3702446/79‑1 (MQ=60)
tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGC < SRR4302543.1386174/79‑1 (MQ=60)
tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGC < SRR4302543.801718/79‑1 (MQ=60)
tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGC > SRR4302543.6063490/16‑94 (MQ=60)
tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGC < SRR4302543.801717/79‑1 (MQ=60)
TTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCG < SRR4302543.6704454/94‑1 (MQ=60)
TTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCG < SRR4302543.7180421/94‑1 (MQ=60)
TTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCG < SRR4302543.819050/94‑1 (MQ=60)
TTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCG < SRR4302543.6048218/94‑1 (MQ=60)
TTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCG > SRR4302543.7235776/1‑94 (MQ=60)
TATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGG < SRR4302543.4107908/94‑1 (MQ=60)
tagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCA > SRR4302543.1080563/12‑94 (MQ=60)
gcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGA < SRR4302543.6800638/85‑1 (MQ=60)
cgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAT > SRR4302543.5357009/9‑94 (MQ=60)
cgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAT < SRR4302543.7192006/86‑1 (MQ=60)
cgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAT < SRR4302543.5442037/86‑1 (MQ=60)
cgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATAAAAAACAATGCTGGCGGCAGAT > SRR4302543.3777131/9‑94 (MQ=60)
gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATT < SRR4302543.2484830/87‑1 (MQ=60)
gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATT > SRR4302543.1164459/8‑94 (MQ=60)
atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTC < SRR4302543.3960679/88‑1 (MQ=60)
atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTC > SRR4302543.2828281/7‑94 (MQ=60)
atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTC < SRR4302543.4969028/88‑1 (MQ=60)
atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTC < SRR4302543.7792818/88‑1 (MQ=60)
atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTC > SRR4302543.1906094/7‑94 (MQ=60)
tagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCG < SRR4302543.5880733/89‑1 (MQ=60)
tagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCG < SRR4302543.3422659/89‑1 (MQ=60)
tagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCG < SRR4302543.334927/89‑1 (MQ=60)
caATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAG > SRR4302543.1297357/3‑94 (MQ=60)
caATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAG < SRR4302543.2559655/92‑1 (MQ=60)
caATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAG > SRR4302543.6450260/3‑94 (MQ=60)
caATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAG > SRR4302543.1118865/3‑94 (MQ=60)
caATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAG > SRR4302543.733313/3‑94 (MQ=60)
AATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGC > SRR4302543.5699012/1‑94 (MQ=60)
AATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGA < SRR4302543.1743/94‑1 (MQ=60)
AATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGA < SRR4302543.2083549/94‑1 (MQ=60)
ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAC > SRR4302543.386012/1‑94 (MQ=60)
TTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACC < SRR4302543.7961325/94‑1 (MQ=60)
TATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCT > SRR4302543.143132/1‑94 (MQ=60)
ATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTC > SRR4302543.3934819/1‑94 (MQ=60)
ATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTC > SRR4302543.6924130/1‑94 (MQ=60)
ATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTC > SRR4302543.1523851/1‑94 (MQ=60)
TTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCA < SRR4302543.7582755/94‑1 (MQ=60)
TTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCA < SRR4302543.3652231/94‑1 (MQ=60)
TTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCA < SRR4302543.6302944/94‑1 (MQ=60)
TTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCAT < SRR4302543.2237757/94‑1 (MQ=60)
TTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCAT < SRR4302543.465765/94‑1 (MQ=60)
TTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCAT < SRR4302543.3806505/94‑1 (MQ=60)
TACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATC > SRR4302543.4599567/1‑94 (MQ=60)
TACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATC > SRR4302543.880954/1‑94 (MQ=60)
ACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCA < SRR4302543.3638336/94‑1 (MQ=60)
ACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCA < SRR4302543.7209128/94‑1 (MQ=60)
ACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCA < SRR4302543.4634372/94‑1 (MQ=60)
ACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCA < SRR4302543.4079576/94‑1 (MQ=60)
ACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCA < SRR4302543.791400/94‑1 (MQ=60)
CTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAG < SRR4302543.2515025/94‑1 (MQ=60)
CTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAG > SRR4302543.650247/1‑94 (MQ=60)
TGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGT > SRR4302543.7399235/1‑94 (MQ=60)
TGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGT > SRR4302543.5119247/1‑94 (MQ=60)
AGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGC > SRR4302543.2015449/1‑94 (MQ=60)
AGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGA < SRR4302543.5935547/94‑1 (MQ=60)
AGTGTCGCGACCATAACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAACACAATGCTGGCGGCAGATTAGAAGCCCTCATCAGTTA > SRR4302543.2015450/1‑94 (MQ=60)
GTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGAC < SRR4302543.2564239/94‑1 (MQ=60)
GTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGAC < SRR4302543.2732154/94‑1 (MQ=60)
TGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACT > SRR4302543.1706412/1‑94 (MQ=60)
TGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACT < SRR4302543.5191707/94‑1 (MQ=60)
TGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATACGAAGACCTCATCAGTGACT < SRR4302543.7735094/94‑1 (MQ=60)
TGTCGCAACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACT < SRR4302543.3698823/94‑1 (MQ=60)
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GACCTATCACTGCAT‑AAATAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACT > NC_000913/4474809‑4474975
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
