Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,562,600 T→C T274A (ACC→GCC)  yjiM ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,562,6000TC99.4% 948.2 / ‑4.1 309T274A (ACC→GCC) yjiMhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (176/131);  total (177/132)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.96e-01

Only 100 of 330 total aligned reads displayed.

AGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGTGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGA  >  NC_000913/4562510‑4562689
                                                                                          |                                                                                          
 ggAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGgcgcc                                                                                         >  1:5694049/1‑92 (MQ=255)
 ggAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCa                                                                                         <  2:5829294/93‑1 (MQ=255)
  gAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAg                                                                                        >  2:4702654/1‑93 (MQ=255)
      agcCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGtttt                                                                                    <  2:733302/93‑1 (MQ=255)
      agcCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGtttt                                                                                    >  2:6707793/1‑93 (MQ=255)
       gcCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTc                                                                                   >  2:7855188/1‑93 (MQ=255)
           aTCGCAAAATATTTATCCGCCAGCGCGTCGTAAGCATCGCCCGTTTCTGCCGCGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATaa                                                                               <  2:1486170/93‑1 (MQ=255)
            tCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAAc                                                                              <  2:6307393/93‑1 (MQ=255)
              gCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAAcag                                                                            >  1:1275727/1‑91 (MQ=255)
              atcAGATATTGATCCGCCAGCGCGACGTAGACATCGCCCGTTTCTGCCACGCATGGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCg                                                                            <  2:2974063/91‑1 (MQ=255)
               ccAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGa                                                                           >  2:7930252/1‑93 (MQ=255)
               ccAGATATTTATACGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGa                                                                           <  1:1003205/93‑1 (MQ=255)
                cAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGAc                                                                          >  2:4427112/1‑93 (MQ=255)
                cAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGAc                                                                          >  2:3551748/1‑93 (MQ=255)
                 aGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACa                                                                         >  1:3719493/1‑93 (MQ=255)
                 aGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGCTTTCATAACCGACa                                                                         >  1:7345948/1‑93 (MQ=255)
                  gATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACaa                                                                        >  1:4349297/1‑93 (MQ=255)
                   atatTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAc                                                                       <  1:3580832/93‑1 (MQ=255)
                   atatTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAc                                                                       <  1:1489695/93‑1 (MQ=255)
                    tatTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAcc                                                                      >  1:5433987/1‑93 (MQ=255)
                     atTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAccc                                                                     >  2:2436186/1‑93 (MQ=255)
                      tttATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATCACCGACAACCCa                                                                    <  2:3714215/93‑1 (MQ=255)
                      tttATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCa                                                                    <  1:1178949/93‑1 (MQ=255)
                      tttATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCa                                                                    >  1:3136492/1‑93 (MQ=255)
                            cGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAgccgcc                                                             <  2:5406833/93‑1 (MQ=255)
                               cAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCAtt                                                          <  1:7611431/93‑1 (MQ=255)
                                aggacgtggtAGGCATCCACCGTTTCCGCCCCGCATTGCTCGGTGCCTTTCGCCCGGGCGCAGTTTTCATAACCGAAAGCCCAGCCGCCATtc                                                         <  2:5978841/89‑1 (MQ=255)
                                aGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATtc                                                         >  2:1637335/1‑93 (MQ=255)
                                    cgtcgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCtt                                                     <  2:5047142/93‑1 (MQ=255)
                                     gtcgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTc                                                    <  1:5189008/93‑1 (MQ=255)
                                     gtcgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTc                                                    <  1:1644045/93‑1 (MQ=255)
                                     gtcgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTc                                                    <  1:1812826/93‑1 (MQ=255)
                                     gtcgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTc                                                    <  1:6933893/93‑1 (MQ=255)
                                     gtcgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTc                                                    >  1:5475428/1‑93 (MQ=255)
                                      tcgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCa                                                   >  1:68107/1‑93 (MQ=255)
                                      tcgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCa                                                   <  1:2033329/93‑1 (MQ=255)
                                      tcgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCa                                                   >  2:4805563/1‑93 (MQ=255)
                                      tcgtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCa                                                   >  2:6386418/1‑93 (MQ=255)
                                        gtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAAt                                                 <  1:5832269/93‑1 (MQ=255)
                                        gtAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAAt                                                 >  2:2719742/1‑93 (MQ=255)
                                         tAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATc                                                >  2:3986451/1‑93 (MQ=255)
                                         tAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATc                                                >  2:5637433/1‑93 (MQ=255)
                                         tAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATc                                                >  2:2882114/1‑93 (MQ=255)
                                         tAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATc                                                >  1:3229234/1‑93 (MQ=255)
                                         tAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATc                                                >  1:4653561/1‑93 (MQ=255)
                                          aGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATcg                                               >  2:4141308/1‑93 (MQ=255)
                                           gACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATcgc                                              <  1:2522352/93‑1 (MQ=255)
                                           gACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATcgc                                              >  2:2599918/1‑93 (MQ=255)
                                           gACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATcgc                                              >  2:6857312/1‑93 (MQ=255)
                                           gACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCGTCAATcgc                                              >  1:62039/1‑93 (MQ=255)
                                             cATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATACCCGACAACCCAGCCGCCATTCTCTTCAATcgcgc                                            <  1:4279104/93‑1 (MQ=255)
                                             cATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATcgcgc                                            <  2:2040132/93‑1 (MQ=255)
                                                cGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGca                                         >  1:2673325/1‑93 (MQ=255)
                                                cGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGca                                         >  1:3050884/1‑93 (MQ=255)
                                                  cccGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGcacc                                       >  2:5760499/1‑93 (MQ=255)
                                                  cccGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGcacc                                       >  1:3811366/1‑93 (MQ=255)
                                                  cccGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGcacc                                       >  1:665526/1‑93 (MQ=255)
                                                   ccGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGcacca                                      >  2:7757682/1‑93 (MQ=255)
                                                   ccGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGcacca                                      >  1:4960079/1‑93 (MQ=255)
                                                     gTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACt                                    >  1:2093586/1‑93 (MQ=255)
                                                      tttCTTCCACGCATTGCTCGGTCGCTTTCGCCCCGGCTCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACtt                                   <  1:4074691/93‑1 (MQ=255)
                                                      tttCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACtt                                   >  2:710782/1‑93 (MQ=255)
                                                       ttCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACttt                                  <  1:3906224/93‑1 (MQ=255)
                                                        tCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACtttt                                 <  2:5127413/93‑1 (MQ=255)
                                                         ttGCCCCGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACttttt                                <  2:4608479/92‑1 (MQ=255)
                                                         cTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACttttt                                >  1:7296264/1‑93 (MQ=255)
                                                          tGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTc                               >  1:3034100/1‑93 (MQ=255)
                                                           gCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTct                              <  2:1290562/93‑1 (MQ=255)
                                                           gCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTct                              <  1:2746609/93‑1 (MQ=255)
                                                           gCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTct                              >  1:226196/1‑93 (MQ=255)
                                                             cACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGGTTTTATAAACCACAAACCACCCCCCCCTCCTCTTCATCTCCCCCCACCACtttttttc                             >  2:6642887/1‑90 (MQ=255)
                                                             cACGCATTGCTCGGTCGCTTTCGACCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTctgc                            <  2:4353403/93‑1 (MQ=255)
                                                              aCGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTctgct                           >  2:6089940/1‑93 (MQ=255)
                                                              aCGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTctgct                           >  2:5903476/1‑93 (MQ=255)
                                                                 cATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTATCATACCCGCCAACCCAGCCGCCGTTCTCTTCGATCGCGCGCACCACTTTTTCTGCTgcg                        <  2:7222646/93‑1 (MQ=255)
                                                                   ttGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGcgcc                      >  2:52381/1‑93 (MQ=255)
                                                                   ttGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGcgcc                      >  1:7026130/1‑93 (MQ=255)
                                                                      cTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCgccgcc                   >  1:6736166/1‑93 (MQ=255)
                                                                       tCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCa                  >  2:1874178/1‑93 (MQ=255)
                                                                       tCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCa                  >  1:781126/1‑93 (MQ=255)
                                                                          gTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATc               >  2:3133125/1‑93 (MQ=255)
                                                                          gTCGCTTTCGCCCCGGCGAAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATc               <  1:4206504/93‑1 (MQ=255)
                                                                           tCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCg              >  1:4561289/1‑93 (MQ=255)
                                                                           tCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCg              >  2:6906487/1‑93 (MQ=255)
                                                                           tCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCg              <  2:1287222/93‑1 (MQ=255)
                                                                             gCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCggg            >  2:227674/1‑93 (MQ=255)
                                                                             gCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCggg            <  1:1469706/93‑1 (MQ=255)
                                                                              cTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCCGGc           >  1:4438290/1‑93 (MQ=255)
                                                                              cTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCa          <  2:3367384/93‑1 (MQ=255)
                                                                               tttCGCCCCGGCGCAGTTTTCATACCCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCa          <  1:121063/93‑1 (MQ=255)
                                                                               tttCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCa          <  1:7651395/93‑1 (MQ=255)
                                                                                ttCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAg         >  2:4623421/1‑93 (MQ=255)
                                                                                   gCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCg      >  1:5350068/1‑93 (MQ=255)
                                                                                   gCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCg      >  1:6369893/1‑93 (MQ=255)
                                                                                    ccccGGTGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCgg     >  1:6516849/1‑93 (MQ=255)
                                                                                    ccccGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCgg     >  1:869942/1‑93 (MQ=255)
                                                                                      ccGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTg   >  1:6333122/1‑93 (MQ=255)
                                                                                      ccGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTg   >  2:4077391/1‑93 (MQ=255)
                                                                                      ccGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTg   >  2:1003399/1‑93 (MQ=255)
                                                                                       cGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGa  >  2:551136/1‑93 (MQ=255)
                                                                                          |                                                                                          
AGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGTGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGA  >  NC_000913/4562510‑4562689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CACAGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGTGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGATTAA  >  NC_000913/4562507‑4562693
                                                                                             |                                                                                             
CACAGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGC                                                                                               >  SRR4302543.3777926/1‑94 (MQ=60)
CACAGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGC                                                                                               >  SRR4302543.7282948/1‑94 (MQ=60)
 ACAGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCG                                                                                              >  SRR4302543.4259599/1‑94 (MQ=60)
 ACAGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCCTTCGCCCCGGCG                                                                                              >  SRR4302543.4259600/1‑94 (MQ=60)
  CAGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGC                                                                                             <  SRR4302543.5767274/94‑1 (MQ=60)
   AGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCA                                                                                            >  SRR4302543.4284154/1‑94 (MQ=60)
   AGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCA                                                                                            >  SRR4302543.587166/1‑94 (MQ=60)
   AGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCA                                                                                            <  SRR4302543.1749163/94‑1 (MQ=60)
    GGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAG                                                                                           <  SRR4302543.1532511/94‑1 (MQ=60)
      AGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTT                                                                                         >  SRR4302543.1492591/1‑94 (MQ=60)
        CAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTT                                                                                       >  SRR4302543.5684746/1‑94 (MQ=60)
        CAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTT                                                                                       >  SRR4302543.6372266/1‑94 (MQ=60)
        CAGCCAATCCCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTT                                                                                       <  SRR4302543.7839831/94‑1 (MQ=60)
         AGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTC                                                                                      >  SRR4302543.6708442/1‑94 (MQ=60)
          GCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGACCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCA                                                                                     <  SRR4302543.7480006/94‑1 (MQ=60)
           CCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCAT                                                                                    >  SRR4302543.4567922/1‑94 (MQ=60)
           CCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCAGCGCAGTTTTCAT                                                                                    >  SRR4302543.6291411/1‑94 (MQ=60)
            CAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATA                                                                                   <  SRR4302543.1196726/94‑1 (MQ=60)
            CAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATA                                                                                   >  SRR4302543.4206988/1‑94 (MQ=60)
            CAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATA                                                                                   >  SRR4302543.5507247/1‑94 (MQ=60)
            CAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATA                                                                                   >  SRR4302543.5507246/1‑94 (MQ=60)
             AATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAA                                                                                  <  SRR4302543.1263833/94‑1 (MQ=60)
             AATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAA                                                                                  >  SRR4302543.6392854/1‑94 (MQ=60)
              ATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAAC                                                                                 <  SRR4302543.3074249/94‑1 (MQ=60)
               TCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACC                                                                                <  SRR4302543.7708717/94‑1 (MQ=60)
               TCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACC                                                                                <  SRR4302543.7809629/94‑1 (MQ=60)
                CGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATCACCG                                                                               >  SRR4302543.1287109/1‑94 (MQ=60)
                CGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACAG                                                                               >  SRR4302543.1287110/1‑94 (MQ=60)
                 GCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGA                                                                              >  SRR4302543.2723733/1‑94 (MQ=60)
                 GCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGA                                                                              >  SRR4302543.4949835/1‑94 (MQ=60)
                 GCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGATCGCTTTCGCCCCGGCGCAGTTTTCATAACCGA                                                                              >  SRR4302543.7708814/1‑94 (MQ=60)
                  CCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGAC                                                                             >  SRR4302543.2209100/1‑94 (MQ=60)
                  CCAGATATTTATACGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGAC                                                                             <  SRR4302543.1012073/94‑1 (MQ=60)
                   CAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACA                                                                            >  SRR4302543.3752203/1‑94 (MQ=60)
                   CAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACA                                                                            >  SRR4302543.7416614/1‑94 (MQ=60)
                   CAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACA                                                                            >  SRR4302543.3376698/1‑94 (MQ=60)
                   CAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGCTTTCATAACCGACA                                                                            >  SRR4302543.7416615/1‑94 (MQ=60)
                    AGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAA                                                                           >  SRR4302543.4469671/1‑94 (MQ=60)
                    AGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAA                                                                           >  SRR4302543.4388720/1‑94 (MQ=60)
                     GATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAC                                                                          >  SRR4302543.6460291/1‑94 (MQ=60)
                     GATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAC                                                                          <  SRR4302543.7457330/94‑1 (MQ=60)
                     GATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAC                                                                          >  SRR4302543.2551179/1‑94 (MQ=60)
                     GATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAC                                                                          >  SRR4302543.2167382/1‑94 (MQ=60)
                     GATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAAC                                                                          <  SRR4302543.4473216/94‑1 (MQ=60)
                      ATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACC                                                                         >  SRR4302543.5483349/1‑94 (MQ=60)
                      ATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACC                                                                         <  SRR4302543.3612467/94‑1 (MQ=60)
                      ATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACC                                                                         <  SRR4302543.1503102/94‑1 (MQ=60)
                        ATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCA                                                                       >  SRR4302543.3164706/1‑94 (MQ=60)
                         TTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAG                                                                      <  SRR4302543.5696999/94‑1 (MQ=60)
                         TTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAG                                                                      <  SRR4302543.1189617/94‑1 (MQ=60)
                           TATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCC                                                                    >  SRR4302543.4604767/1‑94 (MQ=60)
                           TATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCC                                                                    >  SRR4302543.6762232/1‑94 (MQ=60)
                           TATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCC                                                                    <  SRR4302543.3468152/94‑1 (MQ=60)
                            ATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCG                                                                   >  SRR4302543.3824154/1‑94 (MQ=60)
                             TCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGC                                                                  <  SRR4302543.4036724/94‑1 (MQ=60)
                               CGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCA                                                                <  SRR4302543.7885572/94‑1 (MQ=60)
                                 CCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATT                                                              <  SRR4302543.3022292/94‑1 (MQ=60)
                                 CCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATT                                                              >  SRR4302543.6414184/1‑94 (MQ=60)
                                 CCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATT                                                              >  SRR4302543.6171081/1‑94 (MQ=60)
                                  CAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTC                                                             <  SRR4302543.7683701/94‑1 (MQ=60)
                                   AGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCT                                                            <  SRR4302543.4304087/94‑1 (MQ=60)
                                   AGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCT                                                            >  SRR4302543.3110817/1‑94 (MQ=60)
                                   AGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCT                                                            >  SRR4302543.3110816/1‑94 (MQ=60)
                                     CGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCT                                                          >  SRR4302543.5404462/1‑94 (MQ=60)
                                     CGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCT                                                          <  SRR4302543.5251238/94‑1 (MQ=60)
                                       CGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTC                                                        >  SRR4302543.5525043/1‑94 (MQ=60)
                                        GTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCA                                                       >  SRR4302543.68717/1‑94 (MQ=60)
                                        GTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCA                                                       <  SRR4302543.7923333/94‑1 (MQ=60)
                                        GTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCA                                                       <  SRR4302543.1658726/94‑1 (MQ=60)
                                        GTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCA                                                       <  SRR4302543.5235810/94‑1 (MQ=60)
                                        GTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCA                                                       >  SRR4302543.6954047/1‑94 (MQ=60)
                                        GTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCA                                                       <  SRR4302543.1829085/94‑1 (MQ=60)
                                        GTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCA                                                       <  SRR4302543.6999118/94‑1 (MQ=60)
                                         TCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAA                                                      <  SRR4302543.2051594/94‑1 (MQ=60)
                                          TGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAAT                                                     <  SRR4302543.6914124/94‑1 (MQ=60)
                                          CGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAAT                                                     >  SRR4302543.1977187/1‑94 (MQ=60)
                                           GTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCTCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATC                                                    <  SRR4302543.2762614/94‑1 (MQ=60)
                                           GTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATC                                                    <  SRR4302543.5885312/94‑1 (MQ=60)
                                           GTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATC                                                    >  SRR4302543.4695935/1‑94 (MQ=60)
                                           GTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATC                                                    >  SRR4302543.6783801/1‑94 (MQ=60)
                                           GTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATC                                                    >  SRR4302543.5542523/1‑94 (MQ=60)
                                           GTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATC                                                    >  SRR4302543.3258432/1‑94 (MQ=60)
                                           GTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATC                                                    <  SRR4302543.1999794/94‑1 (MQ=60)
                                           GTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATC                                                    <  SRR4302543.2423255/94‑1 (MQ=60)
                                           GTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATC                                                    >  SRR4302543.3258431/1‑94 (MQ=60)
                                           GTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATC                                                    <  SRR4302543.3837783/94‑1 (MQ=60)
                                             AGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCGTCAATCGC                                                  >  SRR4302543.62581/1‑94 (MQ=60)
                                              GACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCG                                                 <  SRR4302543.2545284/94‑1 (MQ=60)
                                               ACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGC                                                >  SRR4302543.4345822/1‑94 (MQ=60)
                                                CATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATACCCGACAACCCAGCCGCCATTCTCTTCAATCGCGCG                                               <  SRR4302543.4317996/94‑1 (MQ=60)
                                                 ATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGgcgcc                                              >  SRR4302543.3428904/1‑89 (MQ=60)
                                                 ATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGC                                              >  SRR4302543.1405639/1‑94 (MQ=60)
                                                 ATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGC                                              >  SRR4302543.1371456/1‑94 (MQ=60)
                                                  TCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCA                                             >  SRR4302543.3078370/1‑94 (MQ=60)
                                                  TCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCA                                             >  SRR4302543.2697562/1‑94 (MQ=60)
                                                    GCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACC                                           >  SRR4302543.3844966/1‑94 (MQ=60)
                                                    GCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACC                                           >  SRR4302543.3071764/1‑94 (MQ=60)
                                                    GCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACC                                           >  SRR4302543.671647/1‑94 (MQ=60)
                                                    GCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACC                                           >  SRR4302543.5830617/1‑94 (MQ=60)
                                                    GCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACC                                           >  SRR4302543.2135287/1‑94 (MQ=60)
                                                     CCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCA                                          >  SRR4302543.5005226/1‑94 (MQ=60)
                                                      CCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCAC                                         >  SRR4302543.4386755/1‑94 (MQ=60)
                                                       CGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACT                                        >  SRR4302543.2112296/1‑94 (MQ=60)
                                                        GTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTT                                       >  SRR4302543.4651679/1‑94 (MQ=60)
                                                        GTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTT                                       >  SRR4302543.424127/1‑94 (MQ=60)
                                                         TTTCTTCCACGCATTGCTCGGTCGCTTTCGCCCCGGCTCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTT                                      <  SRR4302543.4111203/94‑1 (MQ=60)
                                                          TTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTT                                     >  SRR4302543.7214700/1‑94 (MQ=60)
                                                          TTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTT                                     >  SRR4302543.5035440/1‑94 (MQ=60)
                                                          TTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTT                                     <  SRR4302543.2083287/94‑1 (MQ=60)
                                                          TTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTT                                     <  SRR4302543.3940708/94‑1 (MQ=60)
                                                           TCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTT                                    >  SRR4302543.7366663/1‑94 (MQ=60)
                                                            CTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTC                                   >  SRR4302543.3061489/1‑94 (MQ=60)
                                                            CTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTC                                   >  SRR4302543.7396792/1‑94 (MQ=60)
                                                            CTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTC                                   >  SRR4302543.6084292/1‑94 (MQ=60)
                                                             TGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCT                                  <  SRR4302543.4825170/94‑1 (MQ=60)
                                                             TGCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCT                                  >  SRR4302543.228152/1‑94 (MQ=60)
                                                              GCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTG                                 <  SRR4302543.3922075/94‑1 (MQ=60)
                                                              GCCACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTG                                 <  SRR4302543.2771583/94‑1 (MQ=60)
                                                                CACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCT                               >  SRR4302543.3867524/1‑94 (MQ=60)
                                                                CACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCT                               >  SRR4302543.4490879/1‑94 (MQ=60)
                                                                 CCGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTG                              <  SRR4302543.1151550/94‑1 (MQ=60)
                                                                 ACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTG                              <  SRR4302543.3977102/94‑1 (MQ=60)
                                                                 ACGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTG                              <  SRR4302543.426664/94‑1 (MQ=60)
                                                                  CGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCCTTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGC                             >  SRR4302543.3772451/1‑94 (MQ=60)
                                                                  CGCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTCCTGC                             >  SRR4302543.2079143/1‑94 (MQ=60)
                                                                   GCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCG                            <  SRR4302543.1790712/94‑1 (MQ=60)
                                                                   GCATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCG                            >  SRR4302543.7292908/1‑94 (MQ=60)
                                                                    CATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCANAACCGACAACCCAGCCGCCATTCTCTTCAATCGNGCGCACCACTTTTTCTGCTGCGC                           >  SRR4302543.3170467/1‑94 (MQ=60)
                                                                     ATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACACCCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCC                          <  SRR4302543.2877668/94‑1 (MQ=60)
                                                                     ATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCC                          <  SRR4302543.1508538/94‑1 (MQ=60)
                                                                     ATTGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCC                          >  SRR4302543.7093548/1‑94 (MQ=60)
                                                                       TGCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGC                        >  SRR4302543.2641087/1‑94 (MQ=60)
                                                                        GCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACACCCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCC                       <  SRR4302543.7081068/94‑1 (MQ=60)
                                                                        GCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCC                       <  SRR4302543.2452734/94‑1 (MQ=60)
                                                                        GCTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCC                       >  SRR4302543.6799794/1‑94 (MQ=60)
                                                                         CTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCA                      <  SRR4302543.3231458/94‑1 (MQ=60)
                                                                         CTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCA                      >  SRR4302543.787995/1‑94 (MQ=60)
                                                                         CTCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCA                      >  SRR4302543.6669337/1‑94 (MQ=60)
                                                                          TCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAA                     >  SRR4302543.5324625/1‑94 (MQ=60)
                                                                          TCGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAA                     <  SRR4302543.5233757/94‑1 (MQ=60)
                                                                           CGGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACACCCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAAT                    <  SRR4302543.7064259/94‑1 (MQ=60)
                                                                            GGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATC                   >  SRR4302543.7009111/1‑94 (MQ=60)
                                                                            GGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATC                   >  SRR4302543.7466402/1‑94 (MQ=60)
                                                                            GGTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATC                   >  SRR4302543.2991482/1‑94 (MQ=60)
                                                                             GTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCG                  <  SRR4302543.963983/94‑1 (MQ=60)
                                                                             GTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCG                  >  SRR4302543.4602803/1‑94 (MQ=60)
                                                                             GTCGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCG                  <  SRR4302543.1494839/94‑1 (MQ=60)
                                                                             GTCGCTTTCGCCCCGGCGAAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCG                  <  SRR4302543.4244649/94‑1 (MQ=60)
                                                                             GTCGCTTTCCCCCCGGTGCAGTTTTCATACCCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCG                  <  SRR4302543.6870494/94‑1 (MQ=60)
                                                                               CGCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGG                <  SRR4302543.5207691/94‑1 (MQ=60)
                                                                                GCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGC               >  SRR4302543.6369597/1‑94 (MQ=60)
                                                                                GCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGC               <  SRR4302543.1482945/94‑1 (MQ=60)
                                                                                GCTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCCGGC               >  SRR4302543.4478485/1‑94 (MQ=60)
                                                                                GCTTGCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGC               <  SRR4302543.4528276/94‑1 (MQ=60)
                                                                                 CTTTCGCCCCGGCGCAGTTTTCATAACCGACACCCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCA              <  SRR4302543.811266/94‑1 (MQ=60)
                                                                                 CTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCTGCCAATCGGGCA              >  SRR4302543.6703926/1‑94 (MQ=60)
                                                                                 CTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCA              <  SRR4302543.6853189/94‑1 (MQ=60)
                                                                                 CTTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCA              <  SRR4302543.5428599/94‑1 (MQ=60)
                                                                                  TTTCGCCCCGGCGCAGTTTTCATACCCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAG             <  SRR4302543.122157/94‑1 (MQ=60)
                                                                                  TTTCGCCCCGGCGCAGTTTTCATACCCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAG             <  SRR4302543.119695/94‑1 (MQ=60)
                                                                                  TTTCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAG             <  SRR4302543.7723945/94‑1 (MQ=60)
                                                                                  TTTCCCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAG             <  SRR4302543.1808073/94‑1 (MQ=60)
                                                                                  CTTCGCCCCGGCCCAGTTTCCATACCCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAG             <  SRR4302543.4412955/94‑1 (MQ=60)
                                                                                    TCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCC           >  SRR4302543.6448815/1‑94 (MQ=60)
                                                                                    TCGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCC           <  SRR4302543.1305/94‑1 (MQ=60)
                                                                                     CGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCG          >  SRR4302543.6429804/1‑94 (MQ=60)
                                                                                     CGCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCG          >  SRR4302543.5398484/1‑94 (MQ=60)
                                                                                      GCCCCGGTGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGG         >  SRR4302543.6578222/1‑94 (MQ=60)
                                                                                      GCCCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGG         >  SRR4302543.877704/1‑94 (MQ=60)
                                                                                        CCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTG       >  SRR4302543.6392682/1‑94 (MQ=60)
                                                                                        CCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTG       >  SRR4302543.3698318/1‑94 (MQ=60)
                                                                                        CCCGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTG       >  SRR4302543.1023913/1‑94 (MQ=60)
                                                                                          CGGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGAT     <  SRR4302543.3612834/94‑1 (MQ=60)
                                                                                           GGCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGATT    >  SRR4302543.782126/1‑94 (MQ=60)
                                                                                            GCGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGATTA   <  SRR4302543.1196632/94‑1 (MQ=60)
                                                                                             CGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGATTAA  >  SRR4302543.6480316/1‑94 (MQ=60)
                                                                                             CGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGATTAA  >  SRR4302543.5600563/1‑94 (MQ=60)
                                                                                             |                                                                                             
CACAGGAGCAGCCAATCGCCAGATATTTATCCGCCAGCGCGTCGTAGACATCGCCCGTTTCTGCCACGCATTGCTCGGTCGCTTTCGCCCCGGTGCAGTTTTCATAACCGACAACCCAGCCGCCATTCTCTTCAATCGCGCGCACCACTTTTTCTGCTGCGCCGCCAATCGGGCAGCCGGTGATTAA  >  NC_000913/4562507‑4562693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: