Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,601,614	(A)_7→6	coding (569/726 nt)	yjjQ →	putative regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,601,608	0	A	.	99.7%	1560.6 / ‑4.2	342	coding (563/726 nt)	yjjQ	putative regulator
Reads supporting (aligned to +/- strand): ref base A (0/1); new base . (178/163); total (178/164)
Fisher's exact test for biased strand distribution p-value = 4.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 376 total aligned reads displayed.

AGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCAAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTA  >  NC_000913/4601516‑4601697

agagCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAAGATAACTATCAGCGCCCa                                                                                           >  1:7042009/1‑93 (MQ=255)

 gagCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCaa                                                                                          >  1:519775/1‑93 (MQ=255)

   gcgcAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCaaaa                                                                                        >  1:2137061/1‑93 (MQ=255)

       aaGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCaaaaaaca                                                                                    >  2:2211901/1‑91 (MQ=255)

         ggTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCaaaaaacagt                                                                                  >  2:4706550/1‑89 (MQ=255)

          gTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTg                                                                                >  2:4118060/1‑93 (MQ=255)

          gTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTg                                                                                <  1:3675592/93‑1 (MQ=255)

          gTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTg                                                                                <  1:3628287/93‑1 (MQ=255)

           tACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGc                                                                               <  1:5440429/93‑1 (MQ=255)

             cTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGa                                                                             >  1:6102479/1‑93 (MQ=255)

             cTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGa                                                                             <  2:1801467/93‑1 (MQ=255)

             cTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGa                                                                             <  1:4157797/93‑1 (MQ=255)

              tGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAt                                                                            >  1:7121781/1‑93 (MQ=255)

              tGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAt                                                                            >  2:804863/1‑93 (MQ=255)

              tGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAt                                                                            >  1:3856887/1‑93 (MQ=255)

               gCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATg                                                                           <  1:6592388/93‑1 (MQ=255)

               gCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATg                                                                           <  2:903498/93‑1 (MQ=255)

               gCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATg                                                                           <  1:7237348/93‑1 (MQ=255)

                 ggCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCg                                                                         >  2:1548910/1‑93 (MQ=255)

                   cTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTc                                                                       >  1:5655926/1‑93 (MQ=255)

                   cTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTc                                                                       >  1:187352/1‑93 (MQ=255)

                   cTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTc                                                                       >  1:4707314/1‑93 (MQ=255)

                     aTTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGa                                                                     <  1:4543705/93‑1 (MQ=255)

                     aTTAGGTAAAGGAGGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGa                                                                     <  2:5856697/93‑1 (MQ=255)

                      ttAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGAc                                                                    <  2:5594732/93‑1 (MQ=255)

                      ttAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGAc                                                                    >  2:6394026/1‑93 (MQ=255)

                       tAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACt                                                                   <  2:7239035/93‑1 (MQ=255)

                         ggTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTgg                                                                 <  2:3119115/93‑1 (MQ=255)

                            aaaGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCaa                                                              >  2:3382936/1‑93 (MQ=255)

                            aaaGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCaa                                                              >  1:2372588/1‑93 (MQ=255)

                             aaGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAAt                                                             <  2:497891/93‑1 (MQ=255)

                                gATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTca                                                          <  2:6961634/93‑1 (MQ=255)

                                  tGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTcaca                                                        <  1:3142346/93‑1 (MQ=255)

                                   ggggCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAg                                                       <  1:1047359/93‑1 (MQ=255)

                                   ggggCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAg                                                       <  2:3253581/93‑1 (MQ=255)

                                   ggggCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAg                                                       <  2:7530126/93‑1 (MQ=255)

                                   ggggCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAg                                                       <  1:1553019/93‑1 (MQ=255)

                                    gggCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGc                                                      <  2:1355997/93‑1 (MQ=255)

                                      gCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCaa                                                    <  2:3159808/93‑1 (MQ=255)

                                        aTCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACg                                                  >  1:6909967/1‑93 (MQ=255)

                                         tCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGc                                                 <  1:5835457/93‑1 (MQ=255)

                                         tCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGc                                                 >  2:6841949/1‑93 (MQ=255)

                                          cAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCt                                                >  2:3741380/1‑93 (MQ=255)

                                          cAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCAC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCt                                                <  1:7902762/93‑1 (MQ=255)

                                           aaCCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTg                                               >  2:7811582/1‑93 (MQ=255)

                                              cAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGaaa                                            >  2:6064664/1‑93 (MQ=255)

                                                gATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATg                                          >  2:4416402/1‑93 (MQ=255)

                                                gATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATg                                          >  1:3541216/1‑93 (MQ=255)

                                                 aTAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCCCAGCAACGCTGAAATGt                                         >  1:2088718/1‑93 (MQ=255)

                                                 aTAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGt                                         >  2:5162305/1‑93 (MQ=255)

                                                    gCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATg                                      >  1:5611331/1‑93 (MQ=255)

                                                     cTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGc                                     <  1:5955522/93‑1 (MQ=255)

                                                     cTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGc                                     <  2:6306821/93‑1 (MQ=255)

                                                      ttCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCa                                    >  1:2840815/1‑93 (MQ=255)

                                                      ttCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCa                                    <  2:2376946/93‑1 (MQ=255)

                                                      ttCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCa                                    >  2:5768376/1‑93 (MQ=255)

                                                      ttCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCa                                    >  1:4800916/1‑93 (MQ=255)

                                                       tCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCAt                                   <  2:3540364/93‑1 (MQ=255)

                                                       tCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCAt                                   >  2:2976961/1‑93 (MQ=255)

                                                        taTTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATg                                  <  1:4229444/92‑1 (MQ=255)

                                                         aTTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATgg                                 <  1:1640230/93‑1 (MQ=255)

                                                          ttGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGa                                <  2:2604554/93‑1 (MQ=255)

                                                           tGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGAt                               >  1:5022565/1‑93 (MQ=255)

                                                            gCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATa                              >  1:3217461/1‑93 (MQ=255)

                                                            gCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATa                              <  1:894552/93‑1 (MQ=255)

                                                             cTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATaa                             <  2:1698323/93‑1 (MQ=255)

                                                               tAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAt                           >  2:6772542/1‑93 (MQ=255)

                                                               tAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAt                           >  2:2696087/1‑93 (MQ=255)

                                                               tAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAt                           >  2:65877/1‑93 (MQ=255)

                                                               tAAGAAAAGTAAAAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAt                           <  2:7158672/93‑1 (MQ=255)

                                                                aaGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATa                          <  1:1165653/93‑1 (MQ=255)

                                                                aaGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATa                          <  1:6382732/93‑1 (MQ=255)

                                                                 aGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAg                         >  1:4669619/1‑93 (MQ=255)

                                                                  gAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAgc                        >  1:1714146/1‑93 (MQ=255)

                                                                  gAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAgc                        <  2:5351310/93‑1 (MQ=255)

                                                                  gAAAAGGAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAgc                        <  1:3059944/93‑1 (MQ=255)

                                                                    aaaGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAgcgc                      >  1:2606765/1‑93 (MQ=255)

                                                                      aGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAgcgcgc                    >  2:7463050/1‑93 (MQ=255)

                                                                       gTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCa                   <  2:474732/93‑1 (MQ=255)

                                                                       gTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCa                   <  2:2008339/93‑1 (MQ=255)

                                                                        taatatCACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCTATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAg                  <  2:7042008/93‑1 (MQ=255)

                                                                        taataaAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAg                  <  1:6201618/93‑1 (MQ=255)

                                                                         aataaAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAgg                 >  1:5518347/1‑93 (MQ=255)

                                                                           taaAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAgggg               >  1:7624408/1‑92 (MQ=255)

                                                                           taaAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGt               <  1:5120321/93‑1 (MQ=255)

                                                                              aaCTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCa            >  2:4261247/1‑93 (MQ=255)

                                                                              aaCTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCa            >  1:5320648/1‑93 (MQ=255)

                                                                               aCTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCaa           >  1:3769321/1‑93 (MQ=255)

                                                                               aCTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCaa           >  2:2787502/1‑93 (MQ=255)

                                                                                 tATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAaga         <  2:1436734/93‑1 (MQ=255)

                                                                                 tATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAaga         >  2:737315/1‑93 (MQ=255)

                                                                                 tATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAaga         >  2:7629980/1‑93 (MQ=255)

                                                                                      gcgcCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCCAGAGaact    >  2:3409522/1‑93 (MQ=255)

                                                                                      gcgcCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGaact    <  2:1024287/93‑1 (MQ=255)

                                                                                      gcgcCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGaact    >  2:3075817/1‑93 (MQ=255)

                                                                                      gcgcCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGaact    <  2:4047862/93‑1 (MQ=255)

                                                                                      gcgcCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGaact    <  1:1383096/93‑1 (MQ=255)

                                                                                       cgcCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGaactt   >  1:1253128/1‑93 (MQ=255)

                                                                                       cgcCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGaactt   >  2:3860119/1‑93 (MQ=255)

                                                                                         ccccAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGaactta  <  2:2538623/93‑1 (MQ=255)

AGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCAAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTA  >  NC_000913/4601516‑4601697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCAAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTT  >  NC_000913/4601521‑4601706

GCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGCAAAGTAATAAAACTATCAGCGCCCAAAAAAA                                                                                              >  SRR4302543.96753/1‑94 (MQ=60)

  AAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAG                                                                                           <  SRR4302543.1953492/94‑1 (MQ=60)

  AAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAG                                                                                           <  SRR4302543.6989034/94‑1 (MQ=60)

   AGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGT                                                                                          <  SRR4302543.6881945/94‑1 (MQ=60)

   AGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGT                                                                                          >  SRR4302543.6355177/1‑94 (MQ=60)

    GGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTG                                                                                         <  SRR4302543.5692589/94‑1 (MQ=60)

    GGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTG                                                                                         >  SRR4302543.2115471/1‑94 (MQ=60)

    GGTACTGCGGCTATTACGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTG                                                                                         <  SRR4302543.2230838/94‑1 (MQ=60)

     GTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGC                                                                                        <  SRR4302543.3707868/94‑1 (MQ=60)

     GTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGC                                                                                        <  SRR4302543.3660239/94‑1 (MQ=60)

     GTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGC                                                                                        <  SRR4302543.2108602/94‑1 (MQ=60)

     GTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGC                                                                                        <  SRR4302543.368917/94‑1 (MQ=60)

      TACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCG                                                                                       <  SRR4302543.5489817/94‑1 (MQ=60)

       ACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGA                                                                                      >  SRR4302543.6160299/1‑94 (MQ=60)

        CTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAT                                                                                     >  SRR4302543.7190967/1‑94 (MQ=60)

        CTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAT                                                                                     >  SRR4302543.3890961/1‑94 (MQ=60)

        CTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAT                                                                                     >  SRR4302543.7190968/1‑94 (MQ=60)

        CTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAT                                                                                     <  SRR4302543.4195402/94‑1 (MQ=60)

        CTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAT                                                                                     <  SRR4302543.1124846/94‑1 (MQ=60)

        CTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGAT                                                                                     <  SRR4302543.3091090/94‑1 (MQ=60)

          GCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGC                                                                                   <  SRR4302543.7307417/94‑1 (MQ=60)

          GCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGC                                                                                   <  SRR4302543.6654500/94‑1 (MQ=60)

           CGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCG                                                                                  <  SRR4302543.6405153/94‑1 (MQ=60)

           CGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCG                                                                                  <  SRR4302543.1075669/94‑1 (MQ=60)

             GCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTC                                                                                >  SRR4302543.188943/1‑94 (MQ=60)

             GCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTC                                                                                >  SRR4302543.5707501/1‑94 (MQ=60)

             GCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTC                                                                                >  SRR4302543.4750325/1‑94 (MQ=60)

              CTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCG                                                                               >  SRR4302543.5109059/1‑94 (MQ=60)

               TATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGA                                                                              >  SRR4302543.6461200/1‑94 (MQ=60)

               TATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGA                                                                              >  SRR4302543.1205238/1‑94 (MQ=60)

               TATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGA                                                                              >  SRR4302543.2688069/1‑94 (MQ=60)

                ATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGAC                                                                             <  SRR4302543.4585079/94‑1 (MQ=60)

                ATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGAC                                                                             <  SRR4302543.4585080/94‑1 (MQ=60)

                ATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGAC                                                                             >  SRR4302543.5232037/1‑94 (MQ=60)

                 TTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACT                                                                            >  SRR4302543.7041333/1‑94 (MQ=60)

                 TTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACT                                                                            <  SRR4302543.564047/94‑1 (MQ=60)

                  TAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTG                                                                           >  SRR4302543.3479235/1‑94 (MQ=60)

                   AGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGG                                                                          >  SRR4302543.3155081/1‑94 (MQ=60)

                    GGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGA                                                                         >  SRR4302543.1687715/1‑94 (MQ=60)

                      TAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAA                                                                       >  SRR4302543.2394090/1‑94 (MQ=60)

                      TAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAA                                                                       >  SRR4302543.4478026/1‑94 (MQ=60)

                       AAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAAT                                                                      >  SRR4302543.6200760/1‑94 (MQ=60)

                       AAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAAT                                                                      <  SRR4302543.1310724/94‑1 (MQ=60)

                        AAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATT                                                                     >  SRR4302543.724603/1‑94 (MQ=60)

                            GTGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACA                                                                 <  SRR4302543.5695599/94‑1 (MQ=60)

                            ATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACA                                                                 <  SRR4302543.2737361/94‑1 (MQ=60)

                             TGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAG                                                                <  SRR4302543.5199074/94‑1 (MQ=60)

                             TGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAG                                                                <  SRR4302543.5378074/94‑1 (MQ=60)

                             TGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAG                                                                <  SRR4302543.3170609/94‑1 (MQ=60)

                              GGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTGATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGC                                                               >  SRR4302543.2285061/1‑94 (MQ=60)

                              GGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGC                                                               <  SRR4302543.1056739/94‑1 (MQ=60)

                              GGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGC                                                               <  SRR4302543.1566906/94‑1 (MQ=60)

                              GGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGC                                                               <  SRR4302543.18072/94‑1 (MQ=60)

                               GGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCA                                                              <  SRR4302543.3668303/94‑1 (MQ=60)

                                GGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAA                                                             <  SRR4302543.32006/94‑1 (MQ=60)

                                 GCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAAC                                                            <  SRR4302543.7680250/94‑1 (MQ=60)

                                 GCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAAC                                                            <  SRR4302543.6687348/94‑1 (MQ=60)

                                  CATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACG                                                           <  SRR4302543.1474481/94‑1 (MQ=60)

                                  CATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACG                                                           >  SRR4302543.6974909/1‑94 (MQ=60)

                                  CATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACG                                                           >  SRR4302543.3224532/1‑94 (MQ=60)

                                  CATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACG                                                           <  SRR4302543.7913493/94‑1 (MQ=60)

                                   ATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCACCGC                                                          >  SRR4302543.2564878/1‑94 (MQ=60)

                                   ATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGC                                                          >  SRR4302543.3707993/1‑94 (MQ=60)

                                   ATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGC                                                          >  SRR4302543.5080546/1‑94 (MQ=60)

                                   ATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGC                                                          >  SRR4302543.3833953/1‑94 (MQ=60)

                                   ATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGC                                                          >  SRR4302543.5938649/1‑94 (MQ=60)

                                   ATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGC                                                          >  SRR4302543.6190049/1‑94 (MQ=60)

                                   ATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGC                                                          >  SRR4302543.3490287/1‑94 (MQ=60)

                                    TCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCT                                                         <  SRR4302543.7652821/94‑1 (MQ=60)

                                    TCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCT                                                         <  SRR4302543.7304994/94‑1 (MQ=60)

                                    TCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCT                                                         <  SRR4302543.5888531/94‑1 (MQ=60)

                                     CAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTG                                                        <  SRR4302543.4378770/94‑1 (MQ=60)

                                     CAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTG                                                        >  SRR4302543.1349233/1‑94 (MQ=60)

                                     CAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTG                                                        >  SRR4302543.2993472/1‑94 (MQ=60)

                                     CAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACACTG                                                        >  SRR4302543.1349232/1‑94 (MQ=60)

                                     CAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCAC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTG                                                        <  SRR4302543.7977038/94‑1 (MQ=60)

                                      AACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGA                                                       >  SRR4302543.5049026/1‑94 (MQ=60)

                                      AACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGA                                                       <  SRR4302543.897337/94‑1 (MQ=60)

                                      AACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGA                                                       >  SRR4302543.2437985/1‑94 (MQ=60)

                                       ACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAA                                                      >  SRR4302543.1663161/1‑94 (MQ=60)

                                         CAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCGCAGCAACGCTGAAAT                                                    <  SRR4302543.49313/94‑1 (MQ=60)

                                         CAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAAT                                                    <  SRR4302543.6696146/94‑1 (MQ=60)

                                         CAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAAT                                                    >  SRR4302543.7190493/1‑94 (MQ=60)

                                          AGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATG                                                   <  SRR4302543.4254683/94‑1 (MQ=60)

                                          AGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATG                                                   >  SRR4302543.5311195/1‑94 (MQ=60)

                                          AGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATG                                                   >  SRR4302543.3572687/1‑94 (MQ=60)

                                           GATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCCCAGCAACGCTGAAATGT                                                  >  SRR4302543.2107381/1‑94 (MQ=60)

                                            ATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTA                                                 >  SRR4302543.5837778/1‑94 (MQ=60)

                                             TAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTAT                                                <  SRR4302543.6475835/94‑1 (MQ=60)

                                             TAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTAT                                                <  SRR4302543.4713033/94‑1 (MQ=60)

                                              AGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATG                                               >  SRR4302543.5662463/1‑94 (MQ=60)

                                              AGCTTCATTGCGTAAGAAAATTAATAAAACTATCAGCGCCC‑AAAAAACAGTTCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATG                                               <  SRR4302543.5332777/94‑1 (MQ=60)

                                               GCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGC                                              >  SRR4302543.8010183/1‑94 (MQ=60)

                                                CTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCA                                             >  SRR4302543.1661975/1‑94 (MQ=60)

                                                CTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCA                                             <  SRR4302543.6010031/94‑1 (MQ=60)

                                                CTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCA                                             <  SRR4302543.564280/94‑1 (MQ=60)

                                                CTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCA                                             >  SRR4302543.4844793/1‑94 (MQ=60)

                                                CTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCA                                             >  SRR4302543.2866779/1‑94 (MQ=60)

                                                CTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCA                                             <  SRR4302543.6373701/94‑1 (MQ=60)

                                                CTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCA                                             <  SRR4302543.5549312/94‑1 (MQ=60)

                                                 TTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCNCAGCAACGCTGAAATNTATGCAT                                            >  SRR4302543.3612836/1‑94 (MQ=60)

                                                 TTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCAT                                            <  SRR4302543.5179673/94‑1 (MQ=60)

                                                 TTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCAT                                            <  SRR4302543.3660664/94‑1 (MQ=60)

                                                 TTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGACC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCAT                                            <  SRR4302543.7713828/94‑1 (MQ=60)

                                                  TCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATG                                           <  SRR4302543.4735487/94‑1 (MQ=60)

                                                   TATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGG                                          <  SRR4302543.4267812/94‑1 (MQ=60)

                                                   CATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGG                                          <  SRR4302543.4080130/94‑1 (MQ=60)

                                                   CATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGG                                          >  SRR4302543.4405776/1‑94 (MQ=60)

                                                    ATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGA                                         >  SRR4302543.5072290/1‑94 (MQ=60)

                                                    ATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGA                                         <  SRR4302543.2288242/94‑1 (MQ=60)

                                                    ATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGA                                         <  SRR4302543.7268086/94‑1 (MQ=60)

                                                    ATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGA                                         <  SRR4302543.1654861/94‑1 (MQ=60)

                                                     TTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGAT                                        <  SRR4302543.5512217/94‑1 (MQ=60)

                                                     TTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGAT                                        >  SRR4302543.5068270/1‑94 (MQ=60)

                                                     TTGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGAT                                        <  SRR4302543.2570241/94‑1 (MQ=60)

                                                      TGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATA                                       >  SRR4302543.1185891/1‑94 (MQ=60)

                                                      TGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATA                                       >  SRR4302543.5407854/1‑94 (MQ=60)

                                                      TGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATA                                       >  SRR4302543.5407855/1‑94 (MQ=60)

                                                      TGCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATA                                       >  SRR4302543.3246528/1‑94 (MQ=60)

                                                       GCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAA                                      <  SRR4302543.902454/94‑1 (MQ=60)

                                                       GCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAA                                      <  SRR4302543.6048776/94‑1 (MQ=60)

                                                       GCTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAA                                      <  SRR4302543.902455/94‑1 (MQ=60)

                                                        CTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAA                                     >  SRR4302543.5997379/1‑94 (MQ=60)

                                                        CTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAA                                     >  SRR4302543.1638326/1‑94 (MQ=60)

                                                        CTTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAA                                     >  SRR4302543.2101649/1‑94 (MQ=60)

                                                         TTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAT                                    <  SRR4302543.3890195/94‑1 (MQ=60)

                                                         TTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAT                                    <  SRR4302543.5856277/94‑1 (MQ=60)

                                                         TTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAT                                    >  SRR4302543.1730659/1‑94 (MQ=60)

                                                         TTAAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAAT                                    >  SRR4302543.3987419/1‑94 (MQ=60)

                                                           AAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAG                                  >  SRR4302543.4712181/1‑94 (MQ=60)

                                                           AAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAG                                  >  SRR4302543.4711981/1‑94 (MQ=60)

                                                           AAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAG                                  <  SRR4302543.6442802/94‑1 (MQ=60)

                                                           AAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAG                                  >  SRR4302543.3138324/1‑94 (MQ=60)

                                                           AAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAG                                  <  SRR4302543.6585937/94‑1 (MQ=60)

                                                           AAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAG                                  <  SRR4302543.1176250/94‑1 (MQ=60)

                                                           AAGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAG                                  <  SRR4302543.1786135/94‑1 (MQ=60)

                                                            AGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCATAGCAACGCTGAAATGTATGCATGGATAAATAGC                                 <  SRR4302543.968001/94‑1 (MQ=60)

                                                            AGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGC                                 <  SRR4302543.6151902/94‑1 (MQ=60)

                                                            AGAAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGC                                 >  SRR4302543.1729468/1‑94 (MQ=60)

                                                             GAAAAGGAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCG                                <  SRR4302543.3087475/94‑1 (MQ=60)

                                                              AAAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGC                               >  SRR4302543.2630443/1‑94 (MQ=60)

                                                               AAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCG                              <  SRR4302543.1482852/94‑1 (MQ=60)

                                                               AAAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCG                              >  SRR4302543.6108359/1‑94 (MQ=60)

                                                                AAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGC                             >  SRR4302543.4835750/1‑94 (MQ=60)

                                                                AAGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGC                             >  SRR4302543.4835751/1‑94 (MQ=60)

                                                                 AGTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCA                            >  SRR4302543.3216365/1‑94 (MQ=60)

                                                                  GTAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAG                           <  SRR4302543.4218748/94‑1 (MQ=60)

                                                                   TAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGG                          <  SRR4302543.977171/94‑1 (MQ=60)

                                                                   TAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGG                          >  SRR4302543.4930649/1‑94 (MQ=60)

                                                                   TAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGG                          <  SRR4302543.6260189/94‑1 (MQ=60)

                                                                   TAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGG                          >  SRR4302543.5568464/1‑94 (MQ=60)

                                                                   TAATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGG                          >  SRR4302543.5568463/1‑94 (MQ=60)

                                                                    AATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGG                         <  SRR4302543.3832434/94‑1 (MQ=60)

                                                                    AATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGG                         >  SRR4302543.2073481/1‑94 (MQ=60)

                                                                     ATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGT                        >  SRR4302543.7696761/1‑94 (MQ=60)

                                                                     ATAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGG                        >  SRR4302543.7696762/1‑94 (MQ=60)

                                                                      TAAAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTG                       <  SRR4302543.5166623/94‑1 (MQ=60)

                                                                        AAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCA                     >  SRR4302543.2923225/1‑94 (MQ=60)

                                                                        AAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCA                     >  SRR4302543.5368735/1‑94 (MQ=60)

                                                                        AAACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCA                     <  SRR4302543.3763794/94‑1 (MQ=60)

                                                                         AACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAA                    >  SRR4302543.3802506/1‑94 (MQ=60)

                                                                          ACTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAG                   <  SRR4302543.5772569/94‑1 (MQ=60)

                                                                           CTATCAGCGCCC‑AAAAAACAGTGCGATGCGTGGACTGGCAATTCACAGCACCGCTGAAATGCATGCATGGATAAATAGCGCGCAGGaggccagg                  >  SRR4302543.4578124/1‑86 (MQ=60)

                                                                           CTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGA                  >  SRR4302543.3511449/1‑94 (MQ=60)

                                                                           CTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGA                  >  SRR4302543.4599612/1‑94 (MQ=60)

                                                                           CTATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGA                  >  SRR4302543.4712596/1‑94 (MQ=60)

                                                                            TATCAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAG                 <  SRR4302543.5649040/94‑1 (MQ=60)

                                                                               CAGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAAC              <  SRR4302543.42359/94‑1 (MQ=60)

                                                                                AGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGTGTGCAAGAGAACT             >  SRR4302543.1580306/1‑94 (MQ=60)

                                                                                AGCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACT             <  SRR4302543.3645964/94‑1 (MQ=60)

                                                                                 GCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTT            >  SRR4302543.1264366/1‑94 (MQ=60)

                                                                                 GCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTT            <  SRR4302543.1395539/94‑1 (MQ=60)

                                                                                 GCGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTT            <  SRR4302543.3735156/94‑1 (MQ=60)

                                                                                  CGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTA           >  SRR4302543.4264775/1‑94 (MQ=60)

                                                                                  CGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTA           >  SRR4302543.3203015/1‑94 (MQ=60)

                                                                                  CGCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTA           >  SRR4302543.763465/1‑94 (MQ=60)

                                                                                   GCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAA          <  SRR4302543.750491/94‑1 (MQ=60)

                                                                                   GCCC‑AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAA          >  SRR4302543.6402887/1‑94 (MQ=60)

                                                                                     CCCAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAAC         >  SRR4302543.745525/1‑94 (MQ=60)

                                                                                      CCAAAAAACAGTGCGATGCGTTGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACT        >  SRR4302543.6443308/1‑94 (MQ=60)

                                                                                      CCAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACT        >  SRR4302543.1260660/1‑94 (MQ=60)

                                                                                      CCAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACT        <  SRR4302543.703169/94‑1 (MQ=60)

                                                                                      CCAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACT        <  SRR4302543.3480617/94‑1 (MQ=60)

                                                                                       CAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTT       >  SRR4302543.90003/1‑94 (MQ=60)

                                                                                       CAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTT       <  SRR4302543.7519767/94‑1 (MQ=60)

                                                                                       CAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTT       <  SRR4302543.7130676/94‑1 (MQ=60)

                                                                                       CAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTT       <  SRR4302543.1984569/94‑1 (MQ=60)

                                                                                        AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTG      >  SRR4302543.6244807/1‑94 (MQ=60)

                                                                                        AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTG      <  SRR4302543.7171467/94‑1 (MQ=60)

                                                                                        AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTG      >  SRR4302543.5929194/1‑94 (MQ=60)

                                                                                        AAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTG      >  SRR4302543.7518808/1‑94 (MQ=60)

                                                                                          AAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCC    >  SRR4302543.2601595/1‑94 (MQ=60)

                                                                                           AAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCT   >  SRR4302543.762133/1‑94 (MQ=60)

                                                                                            AACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTT  >  SRR4302543.2792476/1‑94 (MQ=60)

GCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCAAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTT  >  NC_000913/4601521‑4601706

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`