Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,604,832 A→G R146R (CGT→CGC)  yjjT ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,604,8320AG99.4% 1022.2 / ‑3.4 327R146R (CGT→CGC) yjjThypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/2);  new base G (175/149);  total (176/151)
Fisher's exact test for biased strand distribution p-value = 2.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.51e-01

Only 100 of 344 total aligned reads displayed.

AAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGACGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCACGCC  >  NC_000913/4604742‑4604921
                                                                                          |                                                                                         
aaaCACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAggcg                                                                                         >  1:6537656/1‑93 (MQ=255)
  acacGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAggcgac                                                                                       >  2:4027725/1‑93 (MQ=255)
    acGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCCAATACCGGCTGTTTTTCCAGGCGACCa                                                                                     >  1:4506400/1‑93 (MQ=255)
      gCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCaaa                                                                                   >  1:5181588/1‑93 (MQ=255)
        cAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCaaaaa                                                                                 <  2:6198845/93‑2 (MQ=255)
        cAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAAt                                                                                 <  1:1562046/93‑1 (MQ=255)
        cAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAAt                                                                                 >  1:4616652/1‑93 (MQ=255)
         aGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATa                                                                                <  1:2578695/93‑1 (MQ=255)
         aGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATa                                                                                <  1:5087775/93‑1 (MQ=255)
          ggCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATag                                                                               <  1:4904229/93‑1 (MQ=255)
           gCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATaga                                                                              <  1:4087439/93‑1 (MQ=255)
           gCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATaga                                                                              <  2:1185547/93‑1 (MQ=255)
            cAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATagag                                                                             <  1:626086/93‑1 (MQ=255)
            cAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATagag                                                                             <  1:3416408/93‑1 (MQ=255)
             aGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAgg                                                                            >  1:2381693/1‑93 (MQ=255)
             aGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAgg                                                                            <  1:7010686/93‑1 (MQ=255)
             aGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAgg                                                                            <  2:1476830/93‑1 (MQ=255)
              gCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGc                                                                           <  1:7906588/93‑1 (MQ=255)
               cggtttGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGcc                                                                          <  1:2006445/90‑1 (MQ=255)
                gTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCca                                                                         >  2:5774309/1‑93 (MQ=255)
                 ttttGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCcac                                                                        >  1:130711/1‑93 (MQ=255)
                 ttttGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTACGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCcac                                                                        >  2:499158/1‑93 (MQ=255)
                  tttGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCcaca                                                                       <  1:4424407/93‑1 (MQ=255)
                   ttGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAg                                                                      >  2:4664844/1‑93 (MQ=255)
                   ttGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAg                                                                      <  1:3934496/93‑1 (MQ=255)
                     gACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGcg                                                                    <  1:6682696/93‑1 (MQ=255)
                      gccGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGcga                                                                   <  2:2736460/92‑1 (MQ=255)
                      aCCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGcga                                                                   >  2:4066294/1‑93 (MQ=255)
                         gTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGcgacga                                                                >  2:1384058/1‑93 (MQ=255)
                           cAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAgc                                                              <  2:4912732/93‑1 (MQ=255)
                            aGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAgcg                                                             >  2:7850748/1‑93 (MQ=255)
                             ggCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAgcgc                                                            <  1:2530030/93‑1 (MQ=255)
                             ggCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAgcgc                                                            >  1:2714019/1‑93 (MQ=255)
                                cATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGATGCCACAGCGACGAGCGCTGt                                                         >  2:2440335/1‑93 (MQ=255)
                                cATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGt                                                         >  1:361935/1‑93 (MQ=255)
                                cATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGt                                                         <  2:6539075/93‑1 (MQ=255)
                                cATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGt                                                         >  2:6955683/1‑93 (MQ=255)
                                cATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGt                                                         >  1:3519134/1‑93 (MQ=255)
                                 aTCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTc                                                        >  2:6235494/1‑93 (MQ=255)
                                 aTCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTc                                                        >  2:2796211/1‑93 (MQ=255)
                                  tCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCg                                                       >  1:2249311/1‑93 (MQ=255)
                                  tCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCg                                                       >  2:3540182/1‑93 (MQ=255)
                                   cGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGa                                                      <  2:3167845/93‑1 (MQ=255)
                                   cGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGa                                                      >  1:777197/1‑93 (MQ=255)
                                    gACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGAc                                                     >  1:279356/1‑93 (MQ=255)
                                     aCGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACt                                                    >  2:5225192/1‑93 (MQ=255)
                                     aCGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACt                                                    >  1:1513736/1‑93 (MQ=255)
                                     aCGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACt                                                    >  1:1358294/1‑93 (MQ=255)
                                       gCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACttt                                                  <  2:5444126/93‑1 (MQ=255)
                                        cTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTa                                                 >  1:1015887/1‑93 (MQ=255)
                                        cTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTa                                                 <  1:1127758/93‑1 (MQ=255)
                                        cTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTa                                                 <  2:7297454/93‑1 (MQ=255)
                                         tGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTAt                                                <  1:7393574/93‑1 (MQ=255)
                                         tGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTAt                                                >  1:3672257/1‑93 (MQ=255)
                                         tGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGGCGGCttttt                                                >  2:2293278/1‑91 (MQ=255)
                                           tATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTc                                              <  2:6633120/93‑1 (MQ=255)
                                            aTTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCa                                             <  2:3701928/93‑1 (MQ=255)
                                                gCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACgg                                         >  1:5192820/1‑93 (MQ=255)
                                                 ccccAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGgc                                        <  2:7091772/93‑1 (MQ=255)
                                                   ccAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGgcgc                                      >  1:439271/1‑93 (MQ=255)
                                                    cAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGTCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCa                                     >  2:3049122/1‑93 (MQ=255)
                                                    cAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCa                                     >  2:3925193/1‑93 (MQ=255)
                                                    cAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCa                                     <  1:196345/93‑1 (MQ=255)
                                                      gAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATa                                   >  2:2501349/1‑93 (MQ=255)
                                                         tttCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATc                                >  1:3793186/1‑93 (MQ=255)
                                                         tttCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATc                                >  1:3241015/1‑93 (MQ=255)
                                                         tttCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATc                                <  2:1813366/93‑1 (MQ=255)
                                                         tttCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATc                                <  1:1811974/93‑1 (MQ=255)
                                                          ttCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCt                               >  2:1948103/1‑93 (MQ=255)
                                                          ttCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCt                               <  1:6379484/93‑1 (MQ=255)
                                                           tctcCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTg                              <  2:4485378/93‑1 (MQ=255)
                                                           tctcCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGAGCATAATCTg                              >  1:4803474/1‑93 (MQ=255)
                                                              ccGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCa                           >  1:6030296/1‑93 (MQ=255)
                                                               cGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAg                          >  2:6069074/1‑93 (MQ=255)
                                                                gCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGc                         >  1:5325638/1‑93 (MQ=255)
                                                                gCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGc                         >  1:922092/1‑93 (MQ=255)
                                                                 cATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCa                        <  2:81749/93‑1 (MQ=255)
                                                                 cATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCa                        <  2:3957328/93‑1 (MQ=255)
                                                                 cATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCa                        <  1:6884626/93‑1 (MQ=255)
                                                                  aTCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCAt                       >  2:3780313/1‑93 (MQ=255)
                                                                   tCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATc                      >  1:5868975/1‑93 (MQ=255)
                                                                     aaaTACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTg                    >  1:2165848/1‑93 (MQ=255)
                                                                       aTACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCt                  <  2:7540162/93‑1 (MQ=255)
                                                                         aCCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCg                <  2:2151481/93‑1 (MQ=255)
                                                                         aCCGGCTGTTTTTCCAGACGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCg                <  1:5496593/93‑1 (MQ=255)
                                                                          ccGGCTGGTTTTCCAGGCGACCACAATAGAGGCCACAGCGAGCAGCGCTGGCGACTTTATTCAAACGCGCATACTCTGCCAGCATATGCTctc               >  2:3468866/1‑91 (MQ=255)
                                                                           cGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGgc              <  1:6071939/93‑1 (MQ=255)
                                                                            ggCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGgcg             >  1:1039203/1‑93 (MQ=255)
                                                                             gCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCGCGCATCTGCTCGgcgc            >  2:2900159/1‑93 (MQ=255)
                                                                               tGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTg          >  1:81010/1‑93 (MQ=255)
                                                                                gTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTgc         >  1:6202436/1‑93 (MQ=255)
                                                                                 tttttCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTgcg        >  1:2926908/1‑93 (MQ=255)
                                                                                 tttttCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTgcg        >  2:4194228/1‑93 (MQ=255)
                                                                                 tttttCCAGACGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTgcg        <  1:7273174/93‑1 (MQ=255)
                                                                                  ttttCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTgcgc       <  2:6421638/93‑1 (MQ=255)
                                                                                  ttttCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTgcgc       >  2:1930276/1‑93 (MQ=255)
                                                                                      ccAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCAcgc   <  1:5765901/93‑1 (MQ=255)
                                                                                      ccAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAACATCTGCTCGGCGCTGCGCAcgc   >  2:5413639/1‑93 (MQ=255)
                                                                                       cAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCAcgcc  <  2:611666/93‑1 (MQ=255)
                                                                                       cAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCAcgcc  <  2:5719446/93‑1 (MQ=255)
                                                                                          |                                                                                         
AAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGACGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCACGCC  >  NC_000913/4604742‑4604921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCTAAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGACGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCACGCCGCTG  >  NC_000913/4604739‑4604925
                                                                                             |                                                                                             
GCTAAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGG                                                                                               <  SRR4302543.5385355/94‑1 (MQ=60)
GCTAAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGG                                                                                               <  SRR4302543.5272421/94‑1 (MQ=60)
GCTAAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTATCCGCATCAAATACCGGCTGTTTTTCCAGG                                                                                               <  SRR4302543.1503984/94‑1 (MQ=60)
 CTAAACACGCCAGGCAGCGTTTTTTCCGTCAGTCCATCGACGCTGTATTCGTCCTAGAATTTCTTCTCATCAAATACTGGCTGTTTTTCCAGGC                                                                                              >  SRR4302543.7093521/1‑94 (MQ=60)
 CTAAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGC                                                                                              >  SRR4302543.5228719/1‑94 (MQ=60)
 CTAAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGC                                                                                              >  SRR4302543.243517/1‑94 (MQ=60)
 CTAAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGC                                                                                              >  SRR4302543.71233/1‑94 (MQ=60)
  TAAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCG                                                                                             <  SRR4302543.1398037/94‑1 (MQ=60)
  TAAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCG                                                                                             >  SRR4302543.6599197/1‑94 (MQ=60)
  TAAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCG                                                                                             >  SRR4302543.2191513/1‑94 (MQ=60)
   AAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGA                                                                                            <  SRR4302543.2975565/94‑1 (MQ=60)
   AAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGA                                                                                            <  SRR4302543.6376822/94‑1 (MQ=60)
      CACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCCAATACCGGCTGTTTTTCCAGGCGACCA                                                                                         >  SRR4302543.4547377/1‑94 (MQ=60)
      CACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCA                                                                                         >  SRR4302543.5400186/1‑94 (MQ=60)
       ACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAA                                                                                        <  SRR4302543.3466789/94‑1 (MQ=60)
        CGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAA                                                                                       >  SRR4302543.5228350/1‑94 (MQ=60)
         GCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAA                                                                                      >  SRR4302543.2744032/1‑94 (MQ=60)
          CCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAAT                                                                                     >  SRR4302543.4658592/1‑94 (MQ=60)
          CCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAAT                                                                                     <  SRR4302543.5572451/94‑1 (MQ=60)
           CAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATA                                                                                    >  SRR4302543.448530/1‑94 (MQ=60)
           CAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATA                                                                                    >  SRR4302543.6235958/1‑94 (MQ=60)
           CAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATA                                                                                    <  SRR4302543.1575994/94‑1 (MQ=60)
            AGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAG                                                                                   <  SRR4302543.5721258/94‑1 (MQ=60)
            AGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAG                                                                                   <  SRR4302543.2602182/94‑1 (MQ=60)
            AGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAG                                                                                   >  SRR4302543.4329175/1‑94 (MQ=60)
            AGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAG                                                                                   <  SRR4302543.5133892/94‑1 (MQ=60)
            AGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAG                                                                                   <  SRR4302543.872648/94‑1 (MQ=60)
            AGGCAGCGTGTTGACCGTGAGGCCATCGACGCTGTATTCTCCCCAGAAGTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAG                                                                                   <  SRR4302543.872649/94‑1 (MQ=60)
             cgtAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGA                                                                                  <  SRR4302543.646347/91‑1 (MQ=60)
             GGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGA                                                                                  <  SRR4302543.4948927/94‑1 (MQ=60)
             GGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGA                                                                                  <  SRR4302543.4948928/94‑1 (MQ=60)
              GCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAG                                                                                 <  SRR4302543.4124089/94‑1 (MQ=60)
              GCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAG                                                                                 >  SRR4302543.4263254/1‑94 (MQ=60)
              GCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAG                                                                                 >  SRR4302543.2599859/1‑94 (MQ=60)
              GCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAG                                                                                 <  SRR4302543.3360211/94‑1 (MQ=60)
               CAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGG                                                                                >  SRR4302543.2403259/1‑94 (MQ=60)
               CAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGG                                                                                <  SRR4302543.631814/94‑1 (MQ=60)
               CAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGG                                                                                >  SRR4302543.2485687/1‑94 (MQ=60)
               CAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGG                                                                                <  SRR4302543.5150477/94‑1 (MQ=60)
               CAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGG                                                                                <  SRR4302543.6427303/94‑1 (MQ=60)
               CAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGG                                                                                <  SRR4302543.3446986/94‑1 (MQ=60)
               CAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGG                                                                                <  SRR4302543.3446987/94‑1 (MQ=60)
               CAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGG                                                                                <  SRR4302543.5237414/94‑1 (MQ=60)
               CAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGG                                                                                >  SRR4302543.2344716/1‑94 (MQ=60)
               CAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGCTTTTCCAGGCGCCCAAAATAGAGG                                                                                >  SRR4302543.5834615/1‑94 (MQ=60)
                AGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGC                                                                               <  SRR4302543.7077517/94‑1 (MQ=60)
                AGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGC                                                                               >  SRR4302543.1332324/1‑94 (MQ=60)
                 GCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCC                                                                              <  SRR4302543.7980883/94‑1 (MQ=60)
                  gggTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCA                                                                             <  SRR4302543.2024479/91‑1 (MQ=60)
                  CGGTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCA                                                                             <  SRR4302543.2024478/94‑1 (MQ=60)
                   GTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCAC                                                                            >  SRR4302543.131880/1‑94 (MQ=60)
                   GTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCAC                                                                            >  SRR4302543.7021801/1‑94 (MQ=60)
                     TTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAG                                                                          <  SRR4302543.4464500/94‑1 (MQ=60)
                     TTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAG                                                                          <  SRR4302543.6574044/94‑1 (MQ=60)
                      TTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGC                                                                         <  SRR4302543.4631469/94‑1 (MQ=60)
                      TTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGC                                                                         <  SRR4302543.3969256/94‑1 (MQ=60)
                      TTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGC                                                                         <  SRR4302543.6402981/94‑1 (MQ=60)
                        GACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGA                                                                       <  SRR4302543.6745780/94‑1 (MQ=60)
                        GACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGA                                                                       >  SRR4302543.2017359/1‑94 (MQ=60)
                         ACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGAC                                                                      >  SRR4302543.4499672/1‑94 (MQ=60)
                           CGTCAGGCCATCGACGCTGTATTCGCCCCAGAAGTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGA                                                                    <  SRR4302543.7683281/94‑1 (MQ=60)
                            GTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAG                                                                   >  SRR4302543.3042856/1‑94 (MQ=60)
                             TCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGC                                                                  >  SRR4302543.5242467/1‑94 (MQ=60)
                               AGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGC                                                                >  SRR4302543.2738682/1‑94 (MQ=60)
                               AGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGC                                                                <  SRR4302543.1357484/94‑1 (MQ=60)
                                GGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCT                                                               <  SRR4302543.6227745/94‑1 (MQ=60)
                                GGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCT                                                               <  SRR4302543.2553055/94‑1 (MQ=60)
                                GGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCT                                                               <  SRR4302543.2553054/94‑1 (MQ=60)
                                 GCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTG                                                              <  SRR4302543.4442958/94‑1 (MQ=60)
                                  CCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGT                                                             >  SRR4302543.365282/1‑94 (MQ=60)
                                  CCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGT                                                             >  SRR4302543.3550547/1‑94 (MQ=60)
                                   CATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTC                                                            <  SRR4302543.8002618/94‑1 (MQ=60)
                                    ATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCG                                                           >  SRR4302543.6010979/1‑94 (MQ=60)
                                    ATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCG                                                           >  SRR4302543.4001933/1‑94 (MQ=60)
                                    ATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCG                                                           >  SRR4302543.6899574/1‑94 (MQ=60)
                                    ATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCG                                                           >  SRR4302543.1919289/1‑94 (MQ=60)
                                    ATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCG                                                           >  SRR4302543.224166/1‑94 (MQ=60)
                                    ATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCG                                                           >  SRR4302543.2269738/1‑94 (MQ=60)
                                     TCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGA                                                          >  SRR4302543.784028/1‑94 (MQ=60)
                                      CGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGAC                                                         >  SRR4302543.281831/1‑94 (MQ=60)
                                      CGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGAC                                                         >  SRR4302543.4115465/1‑94 (MQ=60)
                                       GACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACT                                                        >  SRR4302543.1370455/1‑94 (MQ=60)
                                       GACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACT                                                        <  SRR4302543.7654633/94‑1 (MQ=60)
                                       GACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACT                                                        >  SRR4302543.1527329/1‑94 (MQ=60)
                                        ACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTT                                                       >  SRR4302543.5186641/1‑94 (MQ=60)
                                          GCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTA                                                     >  SRR4302543.1024871/1‑94 (MQ=60)
                                          GCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTA                                                     >  SRR4302543.1025103/1‑94 (MQ=60)
                                           CTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTAT                                                    >  SRR4302543.4762386/1‑94 (MQ=60)
                                           CTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTAT                                                    <  SRR4302543.1137997/94‑1 (MQ=60)
                                           CTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTAT                                                    <  SRR4302543.3790950/94‑1 (MQ=60)
                                           CTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTAT                                                    >  SRR4302543.3704496/1‑94 (MQ=60)
                                            TGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATT                                                   >  SRR4302543.1069393/1‑94 (MQ=60)
                                            TGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATT                                                   <  SRR4302543.7464585/94‑1 (MQ=60)
                                            TGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATT                                                   >  SRR4302543.7264659/1‑94 (MQ=60)
                                            TGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATT                                                   >  SRR4302543.2790578/1‑94 (MQ=60)
                                             GTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTC                                                  <  SRR4302543.2575232/94‑1 (MQ=60)
                                             GTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTC                                                  >  SRR4302543.7141722/1‑94 (MQ=60)
                                             GTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTC                                                  <  SRR4302543.7987447/94‑1 (MQ=60)
                                               ATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCACAATAGAGGCCACAGCGCCGAGCGCggtcccctttcttaca                                                >  SRR4302543.2471265/1‑78 (MQ=60)
                                               ATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAA                                                <  SRR4302543.5641893/94‑1 (MQ=60)
                                                TTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAAC                                               >  SRR4302543.1521683/1‑94 (MQ=60)
                                                TTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAAC                                               <  SRR4302543.5107300/94‑1 (MQ=60)
                                                 TCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACG                                              >  SRR4302543.2100095/1‑94 (MQ=60)
                                                 TCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACG                                              <  SRR4302543.2162765/94‑1 (MQ=60)
                                                 TCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACG                                              <  SRR4302543.3543387/94‑1 (MQ=60)
                                                  CGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGG                                             >  SRR4302543.5398418/1‑94 (MQ=60)
                                                  CGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGG                                             <  SRR4302543.1176548/94‑1 (MQ=60)
                                                  CGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGG                                             <  SRR4302543.1134387/94‑1 (MQ=60)
                                                  CGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGG                                             >  SRR4302543.5239646/1‑94 (MQ=60)
                                                   GCCCCAGAATTGCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGACCACAGCGACGAGCGCTGTCGACTTTATTCAACGGC                                            <  SRR4302543.6142915/94‑1 (MQ=60)
                                                    CCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCG                                           <  SRR4302543.3677200/94‑1 (MQ=60)
                                                     CCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGC                                          >  SRR4302543.2794276/1‑94 (MQ=60)
                                                     CCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGC                                          >  SRR4302543.443386/1‑94 (MQ=60)
                                                      CCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCA                                         >  SRR4302543.3831863/1‑94 (MQ=60)
                                                      CCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCA                                         >  SRR4302543.6705403/1‑94 (MQ=60)
                                                      CCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCA                                         >  SRR4302543.7945997/1‑94 (MQ=60)
                                                       CAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCAT                                        <  SRR4302543.198004/94‑1 (MQ=60)
                                                       CAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCAT                                        <  SRR4302543.5282337/94‑1 (MQ=60)
                                                       CAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCAT                                        >  SRR4302543.2891757/1‑94 (MQ=60)
                                                       CAGAAGTTCTCCGCATCAAATGCCGGCTGCTGTTCCAGTCGGCCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCAT                                        <  SRR4302543.198009/94‑1 (MQ=60)
                                                        CGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATA                                       <  SRR4302543.4492340/94‑1 (MQ=60)
                                                         GAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAA                                      >  SRR4302543.7628608/1‑94 (MQ=60)
                                                         GAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAA                                      <  SRR4302543.7160147/94‑1 (MQ=60)
                                                          AATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAAT                                     <  SRR4302543.3838794/94‑1 (MQ=60)
                                                          AATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAAT                                     >  SRR4302543.1706611/1‑94 (MQ=60)
                                                           ATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATC                                    >  SRR4302543.3826607/1‑94 (MQ=60)
                                                           ATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATC                                    >  SRR4302543.3270330/1‑94 (MQ=60)
                                                            TTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCT                                   <  SRR4302543.3439348/94‑1 (MQ=60)
                                                            TTTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCT                                   <  SRR4302543.1828224/94‑1 (MQ=60)
                                                             TTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTG                                  >  SRR4302543.2648306/1‑94 (MQ=60)
                                                             TTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTG                                  <  SRR4302543.6439511/94‑1 (MQ=60)
                                                             TTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTG                                  <  SRR4302543.4773482/94‑1 (MQ=60)
                                                             TTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTG                                  >  SRR4302543.4907202/1‑94 (MQ=60)
                                                             TTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTG                                  <  SRR4302543.5233333/94‑1 (MQ=60)
                                                             TTCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGAGCATAATCTG                                  >  SRR4302543.4847365/1‑94 (MQ=60)
                                                              TCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGC                                 <  SRR4302543.5057958/94‑1 (MQ=60)
                                                              TCTCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGC                                 >  SRR4302543.5834933/1‑94 (MQ=60)
                                                                TCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCA                               >  SRR4302543.6116208/1‑94 (MQ=60)
                                                                TCCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCA                               >  SRR4302543.6086702/1‑94 (MQ=60)
                                                                 CCGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAG                              <  SRR4302543.4631373/94‑1 (MQ=60)
                                                                  CGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGC                             >  SRR4302543.930162/1‑94 (MQ=60)
                                                                  CGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGC                             >  SRR4302543.6740962/1‑94 (MQ=60)
                                                                  CGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGC                             >  SRR4302543.5358870/1‑94 (MQ=60)
                                                                  CGCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGC                             >  SRR4302543.5373799/1‑94 (MQ=60)
                                                                   GCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCA                            >  SRR4302543.269038/1‑94 (MQ=60)
                                                                   GCATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCA                            >  SRR4302543.6301629/1‑94 (MQ=60)
                                                                    CATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCAT                           <  SRR4302543.6949390/94‑1 (MQ=60)
                                                                    CATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCAT                           >  SRR4302543.6819647/1‑94 (MQ=60)
                                                                    CATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCAT                           <  SRR4302543.3723087/94‑1 (MQ=60)
                                                                     ATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATC                          >  SRR4302543.5945914/1‑94 (MQ=60)
                                                                     ATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATC                          <  SRR4302543.7346704/94‑1 (MQ=60)
                                                                     ATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATC                          >  SRR4302543.6799020/1‑94 (MQ=60)
                                                                     ATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATC                          >  SRR4302543.929369/1‑94 (MQ=60)
                                                                     ATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATC                          >  SRR4302543.3698052/1‑94 (MQ=60)
                                                                     ATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATC                          >  SRR4302543.6090223/1‑94 (MQ=60)
                                                                     ATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATC                          >  SRR4302543.5922411/1‑94 (MQ=60)
                                                                     ATCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGACACAGCGACGAGGGCTGTCGAATTGATTCAACGGCGCATAATCTGTCAGCATC                          >  SRR4302543.1037772/1‑94 (MQ=60)
                                                                      TCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCT                         <  SRR4302543.6302363/94‑1 (MQ=60)
                                                                      TCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCT                         >  SRR4302543.4444388/1‑94 (MQ=60)
                                                                      TCAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTAGTCAACGGCGCATAATCTGCCAGCATCT                         <  SRR4302543.3635071/94‑1 (MQ=60)
                                                                       CAAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTG                        >  SRR4302543.2185253/1‑94 (MQ=60)
                                                                        AAATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGC                       >  SRR4302543.3786371/1‑94 (MQ=60)
                                                                          ATACCGGCTGTTTTTCCAGGCTACCAAAATAGAGGCCACAGCGACGAGCGCTGTCCACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTC                     >  SRR4302543.3602061/1‑94 (MQ=60)
                                                                          ATACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGAATTTATTCAACGGGGCATAATCTGCCAGCATCTGCTC                     <  SRR4302543.1372104/94‑1 (MQ=60)
                                                                           TACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCG                    <  SRR4302543.1213872/94‑1 (MQ=60)
                                                                            ACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGG                   <  SRR4302543.287203/94‑1 (MQ=60)
                                                                            ACCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGG                   >  SRR4302543.3599468/1‑94 (MQ=60)
                                                                            ACCGGCTGTTTTTCCAGACGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGG                   <  SRR4302543.5546447/94‑1 (MQ=60)
                                                                             CCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGC                  >  SRR4302543.6515740/1‑94 (MQ=60)
                                                                             CCGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGC                  <  SRR4302543.1822038/94‑1 (MQ=60)
                                                                              CGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCG                 >  SRR4302543.1048453/1‑94 (MQ=60)
                                                                              CGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCG                 <  SRR4302543.6129487/94‑1 (MQ=60)
                                                                              CGGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCG                 <  SRR4302543.1303495/94‑1 (MQ=60)
                                                                               GGCTGTTTTTCCAGGCGACCACAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGC                >  SRR4302543.7384008/1‑94 (MQ=60)
                                                                               GGCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGC                >  SRR4302543.2317752/1‑94 (MQ=60)
                                                                                GCTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCT               <  SRR4302543.4089566/94‑1 (MQ=60)
                                                                                 CTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTG              >  SRR4302543.81761/1‑94 (MQ=60)
                                                                                 CTGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTG              <  SRR4302543.7969751/94‑1 (MQ=60)
                                                                                  TGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGC             >  SRR4302543.1900853/1‑94 (MQ=60)
                                                                                  TGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGC             >  SRR4302543.6261011/1‑94 (MQ=60)
                                                                                  TGTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGC             >  SRR4302543.1393231/1‑94 (MQ=60)
                                                                                   GTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCG            >  SRR4302543.7012138/1‑94 (MQ=60)
                                                                                   GTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCG            >  SRR4302543.168581/1‑94 (MQ=60)
                                                                                   GTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCG            >  SRR4302543.6065150/1‑94 (MQ=60)
                                                                                   GTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCG            >  SRR4302543.2328152/1‑94 (MQ=60)
                                                                                   GTTTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCG            >  SRR4302543.2953496/1‑94 (MQ=60)
                                                                                    TTTTTCCAGACGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGC           <  SRR4302543.7343428/94‑1 (MQ=60)
                                                                                     TTTTCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCA          >  SRR4302543.4727346/1‑94 (MQ=60)
                                                                                        TCCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCACGC       <  SRR4302543.1539644/94‑1 (MQ=60)
                                                                                         CCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCACGCC      <  SRR4302543.1537313/94‑1 (MQ=60)
                                                                                         CCAGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCACGCC      <  SRR4302543.5818417/94‑1 (MQ=60)
                                                                                           AGGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCACGCCGC    >  SRR4302543.5386146/1‑94 (MQ=60)
                                                                                            GGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCACGCCGCT   <  SRR4302543.4998111/94‑1 (MQ=60)
                                                                                            GGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCACGCCGCT   <  SRR4302543.7982558/94‑1 (MQ=60)
                                                                                            GGCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCACGCCGCT   <  SRR4302543.1175134/94‑1 (MQ=60)
                                                                                             GCGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCGCGCCGCTG  <  SRR4302543.5088989/94‑1 (MQ=60)
                                                                                             |                                                                                             
GCTAAACACGCCAGGCAGCGTTTTGACCGTCAGGCCATCGACGCTGTATTCGCCCCAGAATTTCTCCGCATCAAATACCGGCTGTTTTTCCAGACGACCAAAATAGAGGCCACAGCGACGAGCGCTGTCGACTTTATTCAACGGCGCATAATCTGCCAGCATCTGCTCGGCGCTGCGCACGCCGCTG  >  NC_000913/4604739‑4604925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑