Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTTTTACCACGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCACGCA > NC_000913/3609396‑3609582
|
ATTTTTACCACGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTCCACTTAATACAACAAGTCACAAGGAA > SRR4302543.4737255/1‑94 (MQ=60)
ATTTTTACCACGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAG > SRR4302543.1269951/1‑94 (MQ=60)
ATTTTTACCACGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAG < SRR4302543.1581026/94‑1 (MQ=60)
TTTTACCACGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGC < SRR4302543.6190624/94‑1 (MQ=60)
TTTTACCACGGGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCGGCTACACTTAATACAAAAAGTCACAAGGAAGC < SRR4302543.6190623/94‑1 (MQ=60)
TTACCACGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCC > SRR4302543.7281952/1‑94 (MQ=60)
TACCACGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCC > SRR4302543.4430808/1‑94 (MQ=60)
CCACGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAA < SRR4302543.4660238/94‑1 (MQ=60)
CACGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAAT < SRR4302543.5752904/94‑1 (MQ=60)
CACGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAAT < SRR4302543.5817100/94‑1 (MQ=60)
CACGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAAT > SRR4302543.4957134/1‑94 (MQ=60)
CCGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATG < SRR4302543.4410199/94‑1 (MQ=60)
GCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAA > SRR4302543.5396530/1‑94 (MQ=60)
GCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAA < SRR4302543.2753233/94‑1 (MQ=60)
CTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAAC > SRR4302543.7350180/1‑94 (MQ=60)
CTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAAC < SRR4302543.864047/94‑1 (MQ=60)
CTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAAC < SRR4302543.3656985/94‑1 (MQ=60)
TGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACC < SRR4302543.2492302/94‑1 (MQ=60)
TGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACC > SRR4302543.3467463/1‑94 (MQ=60)
TGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACC > SRR4302543.1665911/1‑94 (MQ=60)
TGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACC < SRR4302543.3742556/94‑1 (MQ=60)
GACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCC > SRR4302543.4046566/1‑94 (MQ=60)
GACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCC < SRR4302543.7156594/94‑1 (MQ=60)
GACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCC > SRR4302543.4913745/1‑94 (MQ=60)
GACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACAC < SRR4302543.630754/94‑1 (MQ=60)
ACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCC < SRR4302543.3585547/94‑1 (MQ=60)
ACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCC < SRR4302543.4880694/94‑1 (MQ=60)
ACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACACC > SRR4302543.7528606/1‑94 (MQ=60)
CGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCT < SRR4302543.4753220/94‑1 (MQ=60)
GTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTC > SRR4302543.231490/1‑94 (MQ=60)
GTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTC > SRR4302543.4457665/1‑94 (MQ=60)
TGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACACCTCA > SRR4302543.5456298/1‑94 (MQ=60)
GAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAA > SRR4302543.876821/1‑94 (MQ=60)
AAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAAC < SRR4302543.59249/94‑1 (MQ=60)
AAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAAC < SRR4302543.3338049/94‑1 (MQ=60)
AAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACC > SRR4302543.3359965/1‑94 (MQ=60)
AATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCC < SRR4302543.6277069/94‑1 (MQ=60)
AATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCC < SRR4302543.3340532/94‑1 (MQ=60)
AATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCC < SRR4302543.3770638/94‑1 (MQ=60)
AATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCC < SRR4302543.3770637/94‑1 (MQ=60)
ATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCG < SRR4302543.460545/94‑1 (MQ=60)
CAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGAT > SRR4302543.5113992/1‑94 (MQ=60)
AGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATA > SRR4302543.7538970/1‑94 (MQ=60)
AGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATA > SRR4302543.1364673/1‑94 (MQ=60)
AGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAA > SRR4302543.5353153/1‑94 (MQ=60)
AGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAA < SRR4302543.1655392/94‑1 (MQ=60)
GTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAAC > SRR4302543.661391/1‑94 (MQ=60)
AAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGG < SRR4302543.4953652/94‑1 (MQ=60)
AAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGG > SRR4302543.1086096/1‑94 (MQ=60)
AAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGG < SRR4302543.2278257/94‑1 (MQ=60)
AAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGG > SRR4302543.2451208/1‑94 (MQ=60)
AGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGG < SRR4302543.4047241/94‑1 (MQ=60)
AGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGG < SRR4302543.4047238/94‑1 (MQ=60)
AATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCA > SRR4302543.4893967/1‑94 (MQ=60)
ATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCAT < SRR4302543.3256285/94‑1 (MQ=60)
ATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCAT < SRR4302543.1712063/94‑1 (MQ=60)
ATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCAT > SRR4302543.6071830/1‑94 (MQ=60)
ATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCAT > SRR4302543.2955188/1‑94 (MQ=60)
ATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCAT < SRR4302543.4847412/94‑1 (MQ=60)
TCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATG < SRR4302543.5495996/94‑1 (MQ=60)
AGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCA < SRR4302543.3252991/94‑1 (MQ=60)
AGAATATTGCTGACGTGACTCCCGCTACACTTAATACAAAAAGTCGCAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCA < SRR4302543.3087052/94‑1 (MQ=60)
GAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCAC < SRR4302543.5136030/94‑1 (MQ=60)
AATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAACACGGGCATGCACA > SRR4302543.5117376/1‑94 (MQ=60)
AATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACA < SRR4302543.6305459/94‑1 (MQ=60)
AATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACA > SRR4302543.5117375/1‑94 (MQ=60)
AATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCGCTCAACCCGATAAACGGGGCATGCACA > SRR4302543.367729/1‑94 (MQ=60)
AATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACA > SRR4302543.367730/1‑94 (MQ=60)
ATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACAT > SRR4302543.4588481/1‑94 (MQ=60)
ATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACAT > SRR4302543.5117955/1‑94 (MQ=60)
ATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACAT < SRR4302543.6560009/94‑1 (MQ=60)
ATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACAT > SRR4302543.3466797/1‑94 (MQ=60)
ATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTC > SRR4302543.4381694/1‑94 (MQ=60)
ATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTC > SRR4302543.6819581/1‑94 (MQ=60)
ATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTC > SRR4302543.5695403/1‑94 (MQ=60)
TTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCT < SRR4302543.6305377/94‑1 (MQ=60)
TTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCT < SRR4302543.875739/94‑1 (MQ=60)
TTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCT < SRR4302543.2611193/94‑1 (MQ=60)
TTGCTGGCGTGACTCCCGCGACACGTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCT < SRR4302543.5452688/94‑1 (MQ=60)
TGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTG > SRR4302543.5142401/1‑94 (MQ=60)
TGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTG > SRR4302543.3394244/1‑94 (MQ=60)
TGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTG > SRR4302543.2287817/1‑94 (MQ=60)
GCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAAGGGAAACCCCTCAACCCGATAAAACGGGCAGGCACATccggc > SRR4302543.6051276/1‑89 (MQ=60)
CTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCT > SRR4302543.7280982/1‑94 (MQ=60)
CTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCT < SRR4302543.4014533/94‑1 (MQ=60)
TGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTC > SRR4302543.87735/1‑94 (MQ=60)
GGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCA > SRR4302543.2710261/1‑94 (MQ=60)
GGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCA > SRR4302543.6675826/1‑94 (MQ=60)
CGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAG > SRR4302543.2685717/1‑94 (MQ=60)
CGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAG < SRR4302543.5265591/94‑1 (MQ=60)
GTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGC > SRR4302543.6796742/1‑94 (MQ=60)
GTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGC < SRR4302543.5503664/94‑1 (MQ=60)
TGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCT < SRR4302543.7140879/94‑1 (MQ=60)
TGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCT > SRR4302543.872416/1‑94 (MQ=60)
TGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCT > SRR4302543.872417/1‑94 (MQ=60)
TGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCT > SRR4302543.5784638/1‑94 (MQ=60)
GACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTG < SRR4302543.7160901/94‑1 (MQ=60)
GACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTG < SRR4302543.3901483/94‑1 (MQ=60)
ACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGG < SRR4302543.3020632/94‑1 (MQ=60)
ACTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGC > SRR4302543.2020365/1‑94 (MQ=60)
CTCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGC > SRR4302543.1433537/1‑94 (MQ=60)
CTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGC > SRR4302543.6914460/1‑94 (MQ=60)
TCCCGCTACACTTAATACACAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCCACCCGATACAACCGGCATGCACATTCTGCTCAAGCTGGCC > SRR4302543.5171336/1‑94 (MQ=60)
TCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCC > SRR4302543.5171337/1‑94 (MQ=60)
TCCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCC < SRR4302543.792199/94‑1 (MQ=60)
CCCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCT > SRR4302543.911243/1‑94 (MQ=60)
CCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTC < SRR4302543.3269591/94‑1 (MQ=60)
CCGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTC < SRR4302543.5609258/94‑1 (MQ=60)
CCGCTACACTTAATACAAAAAGTCACAAGGAAGCTCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTC < SRR4302543.4876348/94‑1 (MQ=60)
CGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCG > SRR4302543.2217929/1‑94 (MQ=60)
CGCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCG < SRR4302543.5672537/94‑1 (MQ=60)
CGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCG > SRR4302543.1460159/1‑94 (MQ=60)
GCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGC > SRR4302543.4152827/1‑94 (MQ=60)
GCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGC > SRR4302543.1085620/1‑94 (MQ=60)
GCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGC > SRR4302543.5940376/1‑94 (MQ=60)
GCTACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGC > SRR4302543.5940375/1‑94 (MQ=60)
CTACAGTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCAGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCT < SRR4302543.2147953/94‑1 (MQ=60)
TACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTG < SRR4302543.5058945/94‑1 (MQ=60)
ACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAGCCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGG < SRR4302543.2867598/94‑1 (MQ=60)
ACACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGG < SRR4302543.7665862/94‑1 (MQ=60)
CACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGT > SRR4302543.4679096/1‑94 (MQ=60)
CACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGT > SRR4302543.6475156/1‑94 (MQ=60)
ACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTA > SRR4302543.4477758/1‑94 (MQ=60)
ACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTA < SRR4302543.4484497/94‑1 (MQ=60)
ACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTA > SRR4302543.4599153/1‑94 (MQ=60)
ACTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTA > SRR4302543.4836187/1‑94 (MQ=60)
CTTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAG > SRR4302543.1691550/1‑94 (MQ=60)
CTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAG > SRR4302543.3429268/1‑94 (MQ=60)
TTAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGT > SRR4302543.1753748/1‑94 (MQ=60)
TAATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTG < SRR4302543.3407046/94‑1 (MQ=60)
AATACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGA < SRR4302543.7624108/94‑1 (MQ=60)
ACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCC < SRR4302543.7052638/94‑1 (MQ=60)
ACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCC > SRR4302543.5789808/1‑94 (MQ=60)
ACAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCC < SRR4302543.1929113/94‑1 (MQ=60)
CAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCT < SRR4302543.1901501/94‑1 (MQ=60)
CAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCT < SRR4302543.7726058/94‑1 (MQ=60)
CAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCT > SRR4302543.3207611/1‑94 (MQ=60)
CAAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCT > SRR4302543.2743154/1‑94 (MQ=60)
AAAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGAGAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTC < SRR4302543.4459785/94‑1 (MQ=60)
AAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTC < SRR4302543.5623978/94‑1 (MQ=60)
AAAAGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCG < SRR4302543.3622245/94‑1 (MQ=60)
AAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCG < SRR4302543.2892208/94‑1 (MQ=60)
AAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGC < SRR4302543.728724/94‑1 (MQ=60)
AAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGC > SRR4302543.907572/1‑94 (MQ=60)
AGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGG > SRR4302543.5824040/1‑94 (MQ=60)
AGTCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGG < SRR4302543.5658667/94‑1 (MQ=60)
TCACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGC > SRR4302543.6394635/1‑94 (MQ=60)
CACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCA > SRR4302543.1729704/1‑94 (MQ=60)
CACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCA > SRR4302543.1653034/1‑94 (MQ=60)
ACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCAT < SRR4302543.2683125/94‑1 (MQ=60)
ACAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCAT < SRR4302543.5960182/94‑1 (MQ=60)
ACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCAT < SRR4302543.5248242/94‑1 (MQ=60)
CAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATT > SRR4302543.2108134/1‑94 (MQ=60)
CAAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATT > SRR4302543.2084272/1‑94 (MQ=60)
AAGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTC > SRR4302543.7419233/1‑94 (MQ=60)
AAGGAATCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTC > SRR4302543.4921500/1‑94 (MQ=60)
AAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTC > SRR4302543.2747490/1‑94 (MQ=60)
AAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTC < SRR4302543.3888887/94‑1 (MQ=60)
AGGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCA < SRR4302543.1201343/94‑1 (MQ=60)
AGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCA < SRR4302543.5801460/94‑1 (MQ=60)
GGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCAC < SRR4302543.5235546/94‑1 (MQ=60)
GGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCAC < SRR4302543.1546290/94‑1 (MQ=60)
GGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCAC < SRR4302543.4138415/94‑1 (MQ=60)
GGAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCAC < SRR4302543.1768863/94‑1 (MQ=60)
GGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCAC < SRR4302543.5407730/94‑1 (MQ=60)
GAGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCACG < SRR4302543.2988869/94‑1 (MQ=60)
GAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCACG < SRR4302543.156996/94‑1 (MQ=60)
GAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCACG < SRR4302543.4571545/94‑1 (MQ=60)
AGGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCACGC > SRR4302543.4826589/1‑94 (MQ=60)
GGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCACGCA < SRR4302543.146109/94‑1 (MQ=60)
GGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCACGCA > SRR4302543.439462/1‑94 (MQ=60)
GGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCACGCA < SRR4302543.6157449/94‑1 (MQ=60)
AGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCACGCA < SRR4302543.6320231/94‑1 (MQ=60)
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ATTTTTACCACGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAAAAAGTCACAAGGAAGCCCCAATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCACGCA > NC_000913/3609396‑3609582
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
