Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,980,319 |
A→G |
H31H (CAT→CAC) |
otsB ← |
trehalose‑6‑phosphate phophatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,980,319 | 0 | A | G | 100.0%
| 480.7
/ NA
| 153 | H31H (CAT→CAC) | otsB | trehalose‑6‑phosphate phophatase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (82/71); total (82/71) |
Only 100 of 161 total aligned reads displayed.
CCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGATGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGT > NC_000913/1980229‑1980408
|
cccTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTg > 2:3728002/1‑93 (MQ=255)
ccTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGc < 1:525198/93‑1 (MQ=255)
ccTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGc > 1:930891/1‑93 (MQ=255)
cTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCg > 1:1154192/1‑93 (MQ=255)
cTGATATCAATGCCAATGCACCATCACTTGCGGCTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCg > 1:856629/1‑93 (MQ=255)
tGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCgg > 2:733895/1‑93 (MQ=255)
atatCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCCGGGTGCGGtt > 2:2516646/1‑93 (MQ=255)
tatCAATGCCAATGCACCATCGCTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGttt < 1:3224577/93‑1 (MQ=255)
aatCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGttt < 1:4144812/92‑1 (MQ=255)
atCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTg > 2:291371/1‑93 (MQ=255)
tCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTgt > 1:2985030/1‑92 (MQ=255)
tCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGa < 2:2394096/93‑1 (MQ=255)
tCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGa > 2:3798727/1‑93 (MQ=255)
tCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGa > 1:2167075/1‑93 (MQ=255)
caatgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGAt > 1:2585163/1‑93 (MQ=255)
aatgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGAtt < 2:4205629/93‑1 (MQ=255)
aatgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGAtt < 1:2423163/93‑1 (MQ=255)
aatgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGAtt > 1:3991048/1‑93 (MQ=255)
atgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGAttt > 1:947240/1‑93 (MQ=255)
atgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGAttt > 1:106769/1‑93 (MQ=255)
tgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTc < 2:1777030/93‑1 (MQ=255)
tgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTc < 1:2478211/93‑1 (MQ=255)
tgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTc > 2:1572985/1‑93 (MQ=255)
tgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTc > 1:3606302/1‑93 (MQ=255)
tgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTc > 1:3313344/1‑93 (MQ=255)
caatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGc > 2:1544570/1‑93 (MQ=255)
aatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGcc > 1:3354077/1‑93 (MQ=255)
cACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCg > 2:2791403/1‑93 (MQ=255)
aCCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGt > 1:619779/1‑93 (MQ=255)
aCCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGt > 1:2671191/1‑93 (MQ=255)
aCCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGt > 1:1676430/1‑93 (MQ=255)
aCCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGGGCGGTTTGATTTTCGCCAGCGt > 1:3481250/1‑93 (MQ=255)
ccATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGtt > 2:2194985/1‑93 (MQ=255)
aTCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTcc < 2:2634537/93‑1 (MQ=255)
aTCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTcc < 1:3344207/93‑1 (MQ=255)
tCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGCTTGATTTCCGCCAGCGTTCCa > 1:3919517/1‑93 (MQ=255)
tCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAAGATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCa < 1:4519589/93‑1 (MQ=255)
aCTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATc > 2:2613894/1‑93 (MQ=255)
aCTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATc > 1:3543400/1‑93 (MQ=255)
cTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCa > 2:1370647/1‑93 (MQ=255)
ttGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCaa < 1:1765433/93‑1 (MQ=255)
ttGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCaa < 2:539320/93‑1 (MQ=255)
ttGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCaa < 2:3322942/93‑1 (MQ=255)
tGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAg < 2:206318/93‑1 (MQ=255)
cGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGAt < 2:2211914/93‑1 (MQ=255)
ttGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaa < 2:1201672/93‑1 (MQ=255)
ttGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaa < 1:534382/93‑1 (MQ=255)
tGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaaa > 2:1169599/1‑93 (MQ=255)
gCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaaaa < 1:1861231/93‑1 (MQ=255)
ccAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaaaaa > 1:75926/1‑93 (MQ=255)
cAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaaaaaa > 2:3247869/1‑93 (MQ=255)
aGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAAc < 2:396185/93‑1 (MQ=255)
aGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAAc > 2:3331352/1‑93 (MQ=255)
gTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAAcc > 2:1923710/1‑93 (MQ=255)
gTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAAcc > 2:910672/1‑93 (MQ=255)
gTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAAcc > 2:49233/1‑93 (MQ=255)
cTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGc < 1:1876868/93‑1 (MQ=255)
cTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGc > 1:594901/1‑93 (MQ=255)
tGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCa < 2:1750382/93‑1 (MQ=255)
tGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCa < 2:3491771/93‑1 (MQ=255)
gTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCat > 2:4326940/1‑93 (MQ=255)
gTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCat < 2:3558965/93‑1 (MQ=255)
gTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCat > 2:3949764/1‑93 (MQ=255)
tAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCata > 1:2917890/1‑93 (MQ=255)
tAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCata < 1:213091/93‑1 (MQ=255)
aGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCatat < 2:4182565/93‑1 (MQ=255)
gTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAtt < 1:1669449/93‑1 (MQ=255)
tCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCTGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAttt > 1:1783571/1‑93 (MQ=255)
ccTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTc < 2:399180/93‑1 (MQ=255)
cTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTcg < 1:4337690/93‑1 (MQ=255)
ttGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTcgc > 2:4623929/1‑93 (MQ=255)
tGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTcgcg < 1:1401749/93‑1 (MQ=255)
aGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGAt > 1:4229171/1‑93 (MQ=255)
aGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGAt < 1:1039898/93‑1 (MQ=255)
gAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATa > 2:845336/1‑93 (MQ=255)
aaTATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAg > 1:3679721/1‑93 (MQ=255)
atatTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGt > 1:3137778/1‑93 (MQ=255)
atatTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGt < 1:1190022/93‑1 (MQ=255)
atTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTc < 1:2813090/93‑1 (MQ=255)
ttGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCa > 2:4475864/1‑93 (MQ=255)
tGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAg < 2:2322173/93‑1 (MQ=255)
gTCAGGCACGACGACCTGATCGGGGTGCGGTTCGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACTAGGCATATTTCGCGGATAGTTCAgg > 1:2065809/1‑93 (MQ=255)
cAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAgggg > 1:3038146/1‑93 (MQ=255)
ggCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAggggct > 2:1887162/1‑91 (MQ=255)
cACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTc < 1:650020/93‑1 (MQ=255)
acgacgACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCg > 1:2919834/1‑93 (MQ=255)
cgacgaCCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCgg < 1:767826/93‑1 (MQ=255)
gacCTGATCGGGGTGCGTTTTGATTTCCGCCAGCGTTACATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTaa < 2:3595384/93‑1 (MQ=255)
acCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAAc > 2:4445999/1‑93 (MQ=255)
cTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAACCCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACgg < 2:1916947/93‑1 (MQ=255)
cTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACgg < 1:461783/93‑1 (MQ=255)
cTGATCGGGGCGCGGATTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGATCAGGGGTTTCGGTTAACgg > 2:3037252/1‑93 (MQ=255)
tGATCGGGGGGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTCACGGt > 2:3201429/1‑93 (MQ=255)
gATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGtt > 2:2560532/1‑93 (MQ=255)
gATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGtt > 1:4244927/1‑93 (MQ=255)
ataggggTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTc < 1:345250/90‑1 (MQ=255)
aTCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTc < 2:3130539/93‑1 (MQ=255)
aTCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTc < 2:2407242/93‑1 (MQ=255)
aTCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTc < 1:1964207/93‑1 (MQ=255)
ggggTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGt > 1:3018934/1‑93 (MQ=255)
|
CCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGATGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGT > NC_000913/1980229‑1980408
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGATGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGTCA > NC_000913/1980229‑1980410
|
CCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGC > SRR4302535.937473/1‑94 (MQ=60)
CCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCG > SRR4302535.1162441/1‑94 (MQ=60)
CCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCG < SRR4302535.528866/94‑1 (MQ=60)
CCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCG < SRR4302535.3467493/94‑1 (MQ=60)
CCTGATATCAATGCCAATGCACCATCACTTGCGGCTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCG > SRR4302535.862666/1‑94 (MQ=60)
GATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTT < SRR4302535.1627116/94‑1 (MQ=60)
GATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTT > SRR4302535.3285745/1‑94 (MQ=60)
TATCAATGCCAATGCACCATCGCTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTG < SRR4302535.3246930/94‑1 (MQ=60)
TATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTG > SRR4302535.1995313/1‑94 (MQ=60)
AATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTG < SRR4302535.4173194/94‑1 (MQ=60)
ATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGT > SRR4302535.354943/1‑94 (MQ=60)
ATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGT > SRR4302535.3005968/1‑94 (MQ=60)
ATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGA > SRR4302535.4252161/1‑94 (MQ=60)
ATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGA > SRR4302535.2933204/1‑94 (MQ=60)
ATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGA > SRR4302535.2182608/1‑94 (MQ=60)
TCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGAT > SRR4302535.2603728/1‑94 (MQ=60)
CAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATT > SRR4302535.4018346/1‑94 (MQ=60)
AATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTT > SRR4302535.107526/1‑94 (MQ=60)
AATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTT < SRR4302535.2440619/94‑1 (MQ=60)
AATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTT > SRR4302535.953952/1‑94 (MQ=60)
ATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTC > SRR4302535.3336397/1‑94 (MQ=60)
ATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTC > SRR4302535.3631321/1‑94 (MQ=60)
TGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCC < SRR4302535.114074/94‑1 (MQ=60)
TGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCC < SRR4302535.2496085/94‑1 (MQ=60)
CAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCC > SRR4302535.3377433/1‑94 (MQ=60)
CACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGT > SRR4302535.2723667/1‑94 (MQ=60)
CACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGT > SRR4302535.624089/1‑94 (MQ=60)
CACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGT > SRR4302535.1688570/1‑94 (MQ=60)
CACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGT > SRR4302535.2690302/1‑94 (MQ=60)
CACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGT < SRR4302535.3841283/94‑1 (MQ=60)
CACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGGGCGGTTTGATTTTCGCCAGCGT > SRR4302535.3505430/1‑94 (MQ=60)
CATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCC > SRR4302535.3120233/1‑94 (MQ=60)
CATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGGTCC > SRR4302535.4364201/1‑94 (MQ=60)
ATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCA < SRR4302535.3367504/94‑1 (MQ=60)
ATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGCTTGATTTCCGCCAGCGTTCCA > SRR4302535.3946322/1‑94 (MQ=60)
TCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAAGATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCAT < SRR4302535.4550564/94‑1 (MQ=60)
CACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATC > SRR4302535.3568014/1‑94 (MQ=60)
ACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCA < SRR4302535.253280/94‑1 (MQ=60)
TTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAG < SRR4302535.1778232/94‑1 (MQ=60)
TTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAG < SRR4302535.4709280/94‑1 (MQ=60)
GGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCA < SRR4302535.444997/94‑1 (MQ=60)
TTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAA < SRR4302535.538118/94‑1 (MQ=60)
GCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAA > SRR4302535.76477/1‑94 (MQ=60)
GCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAA < SRR4302535.1874654/94‑1 (MQ=60)
AGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACC > SRR4302535.596299/1‑94 (MQ=60)
GTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCG > SRR4302535.610303/1‑94 (MQ=60)
GCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGC > SRR4302535.599070/1‑94 (MQ=60)
CTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCA < SRR4302535.1890382/94‑1 (MQ=60)
GTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATA > SRR4302535.2938485/1‑94 (MQ=60)
TAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAT < SRR4302535.3589545/94‑1 (MQ=60)
TAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAT < SRR4302535.214554/94‑1 (MQ=60)
AGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCTGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATT > SRR4302535.2263961/1‑94 (MQ=60)
GTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCTGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTT > SRR4302535.1796479/1‑94 (MQ=60)
GTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTT < SRR4302535.1681527/94‑1 (MQ=60)
CTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGC > SRR4302535.2963451/1‑94 (MQ=60)
CTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGC < SRR4302535.4367355/94‑1 (MQ=60)
CTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGC < SRR4302535.694155/94‑1 (MQ=60)
TGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGG > SRR4302535.2177565/1‑94 (MQ=60)
TGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGG < SRR4302535.1411754/94‑1 (MQ=60)
CAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGAT > SRR4302535.4258116/1‑94 (MQ=60)
AGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATA < SRR4302535.1047276/94‑1 (MQ=60)
GAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAG > SRR4302535.3705189/1‑94 (MQ=60)
AATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGT < SRR4302535.3353453/94‑1 (MQ=60)
AATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGT > SRR4302535.3159614/1‑94 (MQ=60)
AATATTGTCAGGCACGACGACCTGATCGGGGAGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGT > SRR4302535.1340626/1‑94 (MQ=60)
ATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTT < SRR4302535.1198542/94‑1 (MQ=60)
ATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCA < SRR4302535.2833081/94‑1 (MQ=60)
ATTGTCAGGCACGACGACCTGANCGGGGTGCGGTTTGATTTCCGCCAGCGTNCCNTCAAGATCNAAAAACCNGGNATATTTCGCGNTNANTNCA > SRR4302535.1407475/1‑94 (MQ=60)
TGTCAGGCACGACGACCTGATCGGGGTGCGGTTCGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACTAGGCATATTTCGCGGATAGTTCAGG > SRR4302535.2080700/1‑94 (MQ=60)
TCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGG > SRR4302535.3059427/1‑94 (MQ=60)
GGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTT < SRR4302535.4020066/94‑1 (MQ=60)
CACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCG < SRR4302535.654553/94‑1 (MQ=60)
CACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCG > SRR4302535.2940435/1‑94 (MQ=60)
ACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTGTCGG > SRR4302535.1736632/1‑94 (MQ=60)
CGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGT < SRR4302535.773232/94‑1 (MQ=60)
GACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTT > SRR4302535.3029046/1‑94 (MQ=60)
ACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACG < SRR4302535.910977/94‑1 (MQ=60)
CTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGT < SRR4302535.465008/94‑1 (MQ=60)
TGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTT < SRR4302535.1845265/94‑1 (MQ=60)
TGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTT > SRR4302535.4273985/1‑94 (MQ=60)
TGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTT < SRR4302535.828657/94‑1 (MQ=60)
ATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCT < SRR4302535.1978369/94‑1 (MQ=60)
ATCGGGGGGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGAATATTTCGCGGATAGTTCATGGGTTTCGGTTAACGGTTCT > SRR4302535.1352112/1‑94 (MQ=60)
ATAGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCT < SRR4302535.347629/94‑1 (MQ=60)
CGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGT > SRR4302535.3040080/1‑94 (MQ=60)
GGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGTC < SRR4302535.1889945/94‑1 (MQ=60)
GGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGTCA < SRR4302535.3092795/94‑1 (MQ=60)
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CCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGATGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGTCA > NC_000913/1980229‑1980410
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
