Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,980,319 |
A→G |
H31H (CAT→CAC) |
otsB ← |
trehalose‑6‑phosphate phophatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,980,319 | 0 | A | G | 100.0%
| 712.7
/ NA
| 228 | H31H (CAT→CAC) | otsB | trehalose‑6‑phosphate phophatase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (127/101); total (127/101) |
Only 100 of 236 total aligned reads displayed.
CCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGATGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGT > NC_000913/1980229‑1980408
|
ccTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGc > 1:685143/1‑93 (MQ=255)
cTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCg < 1:1193314/93‑1 (MQ=255)
atatCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGtt > 2:4001375/1‑93 (MQ=255)
tatCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGttt > 2:7660428/1‑93 (MQ=255)
atCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTg > 1:2706051/1‑93 (MQ=255)
caatgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGAt < 2:7871276/93‑1 (MQ=255)
catgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGAtt < 2:2032450/92‑1 (MQ=255)
aatgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGAtt < 1:385935/93‑1 (MQ=255)
aatgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGGTTGAtt > 2:51549/1‑93 (MQ=255)
tgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTc > 1:438736/1‑93 (MQ=255)
tgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTc < 1:7790223/93‑1 (MQ=255)
ccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCg < 1:4066625/93‑1 (MQ=255)
caatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGc > 2:7068593/1‑93 (MQ=255)
atgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCa < 2:4508912/93‑1 (MQ=255)
atgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCa > 2:7649315/1‑93 (MQ=255)
cACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCg < 2:5528471/93‑1 (MQ=255)
aCCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGt > 2:3603184/1‑93 (MQ=255)
cATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTc < 2:1546499/93‑1 (MQ=255)
cATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTc < 1:5590911/93‑1 (MQ=255)
ctCACTTGGGGTTTCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTcc < 1:3701640/92‑1 (MQ=255)
aTCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCCGCGTTcc > 2:5331286/1‑93 (MQ=255)
aTCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTcc < 2:7512630/93‑1 (MQ=255)
tCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCa > 1:3964002/1‑93 (MQ=255)
tCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCa > 2:1262957/1‑93 (MQ=255)
tCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCa > 1:6428463/1‑93 (MQ=255)
tCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGCTCCa > 2:566249/1‑93 (MQ=255)
cACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCAt > 2:1698345/1‑93 (MQ=255)
cACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCAt < 1:1346355/93‑1 (MQ=255)
aCTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATc < 1:6716081/93‑1 (MQ=255)
ttGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCaa < 1:5446307/93‑1 (MQ=255)
tGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAg < 2:5568747/93‑1 (MQ=255)
cGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGAt < 1:7678400/93‑1 (MQ=255)
ggTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATc > 2:4959046/1‑93 (MQ=255)
gTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCa > 2:6047901/1‑93 (MQ=255)
gCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaaaa < 2:5870861/93‑1 (MQ=255)
ccAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaaaaa > 1:2450052/1‑93 (MQ=255)
cAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaaaaaa > 1:4739353/1‑93 (MQ=255)
cAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaaaaaa > 2:3052642/1‑93 (MQ=255)
aGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAAc > 1:3518092/1‑93 (MQ=255)
aGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAAc > 2:6911107/1‑93 (MQ=255)
gTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAAcc > 2:5900072/1‑93 (MQ=255)
tAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCa > 2:808457/1‑93 (MQ=255)
tAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCa < 1:3017046/93‑1 (MQ=255)
tAGCTGTAGTCCTTGCAGAATATTGTAAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCa > 2:7248479/1‑93 (MQ=255)
aGCTGTAGTCCTTGCAGAATATTGTCAGGCCCGGCGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAg < 1:7317934/93‑1 (MQ=255)
aGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAg < 1:4463229/93‑1 (MQ=255)
gCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAgg > 2:3856076/1‑93 (MQ=255)
tttcgTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCa < 1:2837978/89‑1 (MQ=255)
tGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCa < 2:4972302/93‑1 (MQ=255)
gTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCat > 1:888794/1‑93 (MQ=255)
gTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGCTCCATCAAGATCAAAAAACCAGGCat > 2:5737138/1‑93 (MQ=255)
tAGTCCTTGCAGAATATTGTCAGGCACGACGACCTAATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCata > 1:3928528/1‑93 (MQ=255)
aGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCatat < 2:3964487/93‑1 (MQ=255)
gTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGTTCAAAAAACCAGGCATAtt < 1:7661063/93‑1 (MQ=255)
gTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAtt < 1:6995680/93‑1 (MQ=255)
gTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAtt < 1:3078017/93‑1 (MQ=255)
tCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAttt < 1:2955835/93‑1 (MQ=255)
tCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAttt > 1:1390959/1‑93 (MQ=255)
cTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTcg < 2:2799335/93‑1 (MQ=255)
cTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTcg > 1:1804793/1‑93 (MQ=255)
ttGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTcgc > 1:483564/1‑93 (MQ=255)
tggCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGACATATTTcgc < 2:3262986/91‑1 (MQ=255)
tGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTcgcg > 1:457634/1‑93 (MQ=255)
tGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTcgcg > 2:4704827/1‑93 (MQ=255)
gCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCgg > 1:2006615/1‑93 (MQ=255)
aGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGAt > 2:5506254/1‑93 (MQ=255)
gAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCACGATCAAAAAACCAGGCATATTTCGCGGATa > 1:1715922/1‑93 (MQ=255)
gAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATa < 2:3702152/93‑1 (MQ=255)
tatTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGtt > 1:2599876/1‑93 (MQ=255)
atTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTc < 2:5232720/93‑1 (MQ=255)
atTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTc > 2:4559486/1‑93 (MQ=255)
atTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTc < 2:2155259/93‑1 (MQ=255)
atTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTc > 1:6190580/1‑93 (MQ=255)
ttGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCa < 1:824324/93‑1 (MQ=255)
tGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAg < 2:3156250/93‑1 (MQ=255)
tGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAg > 2:1201692/1‑93 (MQ=255)
gTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAgg < 2:2981476/93‑1 (MQ=255)
aGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGt < 1:6735525/93‑1 (MQ=255)
ggCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGtt > 2:6347103/1‑93 (MQ=255)
gacgacCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGt < 2:4202629/93‑1 (MQ=255)
acgacCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGtt > 1:3303832/1‑93 (MQ=255)
gacCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTaa > 2:6208878/1‑93 (MQ=255)
acCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAAc > 1:7180870/1‑93 (MQ=255)
acCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAAc > 1:4023105/1‑93 (MQ=255)
acCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAAc > 1:5161094/1‑93 (MQ=255)
acCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGGTCAGGGGGTTCGGTTAAc > 1:2283046/1‑93 (MQ=255)
ccTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACg < 1:5836911/93‑1 (MQ=255)
ccTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACg < 2:6611994/93‑1 (MQ=255)
tGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGt > 2:6546657/1‑93 (MQ=255)
gATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGtt > 2:1824952/1‑93 (MQ=255)
aTCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTc < 2:6681968/93‑1 (MQ=255)
aTCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTc < 1:5897364/93‑1 (MQ=255)
aTCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTc < 1:3569690/93‑1 (MQ=255)
aTCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTc < 1:520327/93‑1 (MQ=255)
tCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCt < 1:3298918/93‑1 (MQ=255)
tCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCt > 2:2098529/1‑93 (MQ=255)
tCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCt > 1:3678940/1‑93 (MQ=255)
tCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCt < 1:4295312/93‑1 (MQ=255)
cGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTg < 2:5492928/93‑1 (MQ=255)
ggggTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGt < 2:1743409/93‑1 (MQ=255)
|
CCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGATGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGT > NC_000913/1980229‑1980408
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGCCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGATGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGTCA > NC_000913/1980226‑1980410
|
GCGCCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGG < SRR4302543.4272309/94‑1 (MQ=60)
CGCCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGT > SRR4302543.413457/1‑94 (MQ=60)
GCCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTG > SRR4302543.4023163/1‑94 (MQ=60)
GCCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTG > SRR4302543.3078498/1‑94 (MQ=60)
GCCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTG < SRR4302543.230640/94‑1 (MQ=60)
CCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGC > SRR4302543.691454/1‑94 (MQ=60)
CCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCG > SRR4302543.5530086/1‑94 (MQ=60)
CTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGG < SRR4302543.1204076/94‑1 (MQ=60)
TGATATCAATGCCAATGCACCATCACTTGCGGTTTCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGTCCTGATCGGGGTGCGGT < SRR4302543.2963210/94‑1 (MQ=60)
TATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTG > SRR4302543.4563382/1‑94 (MQ=60)
TATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTG > SRR4302543.2730605/1‑94 (MQ=60)
ATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGA > SRR4302543.3000817/1‑94 (MQ=60)
ATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGA > SRR4302543.2541694/1‑94 (MQ=60)
AATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTT < SRR4302543.389499/94‑1 (MQ=60)
AATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTT > SRR4302543.3029893/1‑94 (MQ=60)
AATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTT < SRR4302543.2670178/94‑1 (MQ=60)
AATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTT > SRR4302543.7679386/1‑94 (MQ=60)
ATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTC > SRR4302543.442847/1‑94 (MQ=60)
ATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTC < SRR4302543.1644295/94‑1 (MQ=60)
ATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGGGCGGTTTGATTTC > SRR4302543.2752192/1‑94 (MQ=60)
ATGCCAATGCACCATCACTTGCGGATGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTC > SRR4302543.3209576/1‑94 (MQ=60)
TGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCC < SRR4302543.7863651/94‑1 (MQ=60)
CCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGC < SRR4302543.4103049/94‑1 (MQ=60)
CAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCC < SRR4302543.5039788/94‑1 (MQ=60)
CAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCC > SRR4302543.604786/1‑94 (MQ=60)
CAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCC > SRR4302543.3158987/1‑94 (MQ=60)
GCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCG > SRR4302543.4632998/1‑94 (MQ=60)
GCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCG > SRR4302543.3469018/1‑94 (MQ=60)
CACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGT < SRR4302543.7489091/94‑1 (MQ=60)
CCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTC < SRR4302543.2189551/94‑1 (MQ=60)
CATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCC < SRR4302543.5641841/94‑1 (MQ=60)
CTCACTTGGGGTTTCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCA < SRR4302543.3734180/94‑1 (MQ=60)
ATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCA > SRR4302543.3999111/1‑94 (MQ=60)
ATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCA > SRR4302543.6489035/1‑94 (MQ=60)
ATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCA < SRR4302543.6717484/94‑1 (MQ=60)
CACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATC > SRR4302543.7345146/1‑94 (MQ=60)
CACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATC < SRR4302543.1358389/94‑1 (MQ=60)
ACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCA < SRR4302543.6779560/94‑1 (MQ=60)
ACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCA < SRR4302543.7209833/94‑1 (MQ=60)
TTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAG < SRR4302543.896636/94‑1 (MQ=60)
TTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAG < SRR4302543.3592827/94‑1 (MQ=60)
TTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAG < SRR4302543.5495727/94‑1 (MQ=60)
GCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGAT < SRR4302543.333320/94‑1 (MQ=60)
CGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATC < SRR4302543.7751138/94‑1 (MQ=60)
GGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCA > SRR4302543.6191555/1‑94 (MQ=60)
GGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCA < SRR4302543.5436701/94‑1 (MQ=60)
GTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAA > SRR4302543.5232103/1‑94 (MQ=60)
GCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAA > SRR4302543.1477086/1‑94 (MQ=60)
GCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAA > SRR4302543.2472152/1‑94 (MQ=60)
CCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAA > SRR4302543.4782655/1‑94 (MQ=60)
CAGTAGCTGTAGTCCTTGCAGAATATTTGCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCTGCGTTCCATCAAGATCAAAAAAC > SRR4302543.4380332/1‑94 (MQ=60)
CAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAAC > SRR4302543.3549500/1‑94 (MQ=60)
AGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACA > SRR4302543.1359945/1‑94 (MQ=60)
TAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAG < SRR4302543.3044333/94‑1 (MQ=60)
AGCTGTAGTCCTTGCAGAATATTGTCAGGCCCGGCGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGG < SRR4302543.7388435/94‑1 (MQ=60)
AGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGG < SRR4302543.4503671/94‑1 (MQ=60)
AGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGG < SRR4302543.4503670/94‑1 (MQ=60)
AGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGG > SRR4302543.3876581/1‑94 (MQ=60)
AGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGG > SRR4302543.7744836/1‑94 (MQ=60)
CTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCA < SRR4302543.5896252/94‑1 (MQ=60)
CTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCA > SRR4302543.78916/1‑94 (MQ=60)
CTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCA > SRR4302543.360982/1‑94 (MQ=60)
CTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCA < SRR4302543.4030050/94‑1 (MQ=60)
CTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCA < SRR4302543.3994011/94‑1 (MQ=60)
tttcGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCAT < SRR4302543.2863924/90‑1 (MQ=60)
TGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCAT > SRR4302543.896662/1‑94 (MQ=60)
TGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCAT > SRR4302543.7943760/1‑94 (MQ=60)
GTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATA < SRR4302543.1755324/94‑1 (MQ=60)
GTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTAATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATA > SRR4302543.3963202/1‑94 (MQ=60)
TAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAT > SRR4302543.700773/1‑94 (MQ=60)
TAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAT < SRR4302543.6561569/94‑1 (MQ=60)
GAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAT < SRR4302543.2721061/94‑1 (MQ=60)
AGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGGGCGGTTTGATTTCCGCCAGGCTTCCATCAACGTCAAAAAACTATGCATATT > SRR4302543.7632172/1‑94 (MQ=60)
GTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGTTCAAAAAACCAGGCATATTT < SRR4302543.7733678/94‑1 (MQ=60)
GTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTT < SRR4302543.3105697/94‑1 (MQ=60)
GTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTT > SRR4302543.1403482/1‑94 (MQ=60)
GTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTT < SRR4302543.7061673/94‑1 (MQ=60)
TCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTC < SRR4302543.2982671/94‑1 (MQ=60)
CCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCG > SRR4302543.1820946/1‑94 (MQ=60)
CCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCG > SRR4302543.3597103/1‑94 (MQ=60)
CCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCG > SRR4302543.3905241/1‑94 (MQ=60)
CCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCG > SRR4302543.1820947/1‑94 (MQ=60)
CTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGC > SRR4302543.4209933/1‑94 (MQ=60)
CTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGC > SRR4302543.488031/1‑94 (MQ=60)
CTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGAGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGC > SRR4302543.488030/1‑94 (MQ=60)
TTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCG > SRR4302543.461887/1‑94 (MQ=60)
TGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGG > SRR4302543.2024651/1‑94 (MQ=60)
GCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGA > SRR4302543.2318029/1‑94 (MQ=60)
AGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCACGATCAAAAAACCAGGCATATTTCGCGGATA > SRR4302543.1731253/1‑94 (MQ=60)
GAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAG > SRR4302543.4442355/1‑94 (MQ=60)
ATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTT > SRR4302543.2623490/1‑94 (MQ=60)
ATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTT > SRR4302543.3815104/1‑94 (MQ=60)
TATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTC > SRR4302543.6249064/1‑94 (MQ=60)
TTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAG < SRR4302543.831591/94‑1 (MQ=60)
GTCATGCACGCCGACATGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCAATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGG < SRR4302543.574474/94‑1 (MQ=60)
GTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGG < SRR4302543.897923/94‑1 (MQ=60)
AGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTT < SRR4302543.6799148/94‑1 (MQ=60)
AGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTT < SRR4302543.6799149/94‑1 (MQ=60)
AGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTT < SRR4302543.223218/94‑1 (MQ=60)
AGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTT < SRR4302543.4264485/94‑1 (MQ=60)
GGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTT < SRR4302543.5527673/94‑1 (MQ=60)
GGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGAATATTTCGCGGATAGTTCAGGGGATT > SRR4302543.7001082/1‑94 (MQ=60)
ACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGG < SRR4302543.5008176/94‑1 (MQ=60)
GACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTT > SRR4302543.1355966/1‑94 (MQ=60)
GACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTT > SRR4302543.3333639/1‑94 (MQ=60)
ACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTA > SRR4302543.6878752/1‑94 (MQ=60)
GACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAAC > SRR4302543.7250559/1‑94 (MQ=60)
GACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAAC > SRR4302543.3730901/1‑94 (MQ=60)
GACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAAC > SRR4302543.4059047/1‑94 (MQ=60)
GACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAAC > SRR4302543.5207730/1‑94 (MQ=60)
GACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGGTCAGGGGGTTCGGTTAAC > SRR4302543.2303906/1‑94 (MQ=60)
CCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGG < SRR4302543.5890001/94‑1 (MQ=60)
CCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGG > SRR4302543.40645/1‑94 (MQ=60)
CTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGT > SRR4302543.780044/1‑94 (MQ=60)
ATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCT > SRR4302543.3711256/1‑94 (MQ=60)
ATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCT < SRR4302543.3601252/94‑1 (MQ=60)
ATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCT < SRR4302543.5951154/94‑1 (MQ=60)
ATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCT < SRR4302543.525158/94‑1 (MQ=60)
TCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTG < SRR4302543.4334357/94‑1 (MQ=60)
TCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTG < SRR4302543.3328684/94‑1 (MQ=60)
TCGGGGTGCGGTTTGATTTCCGCCAGCGCTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTG > SRR4302543.6365061/1‑94 (MQ=60)
GGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGTCA < SRR4302543.7129569/94‑1 (MQ=60)
GGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGTCA > SRR4302543.7353890/1‑94 (MQ=60)
GGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGTCA > SRR4302543.2219104/1‑94 (MQ=60)
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GCGCCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGATGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGTCA > NC_000913/1980226‑1980410
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
