Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,045,049 |
T→C |
V722A (GTC→GCC) |
b1978 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,045,049 | 0 | T | C | 100.0%
| 561.1
/ NA
| 176 | V722A (GTC→GCC) | b1978 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (91/85); total (91/85) |
Only 100 of 179 total aligned reads displayed.
AGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATAC > NC_000913/2044959‑2045136
|
ggAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCta > 1:3632590/1‑93 (MQ=255)
ggAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCta > 1:2897010/1‑93 (MQ=255)
gAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCtat > 1:491862/1‑93 (MQ=255)
gAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCtat > 1:2065545/1‑93 (MQ=255)
aCAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATaa < 1:1275601/93‑1 (MQ=255)
aCAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATaa < 1:1580109/93‑1 (MQ=255)
aCAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATaa < 1:2548790/93‑1 (MQ=255)
cAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTGACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAg > 2:2848509/1‑93 (MQ=255)
cAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAg < 2:493075/93‑1 (MQ=255)
cAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAg > 2:3688379/1‑93 (MQ=255)
cAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAg < 2:3519502/93‑1 (MQ=255)
aaaaaCAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAgg > 2:1214639/1‑93 (MQ=255)
aaCAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGa < 2:263484/93‑1 (MQ=255)
gCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCta > 2:785669/1‑93 (MQ=255)
aCTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAc < 1:3922324/93‑1 (MQ=255)
aCTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAc > 1:4205697/1‑93 (MQ=255)
aCTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAc < 2:963520/93‑1 (MQ=255)
aCTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAc > 2:365826/1‑93 (MQ=255)
cTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAcc < 2:2204468/93‑1 (MQ=255)
cTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAcc < 1:1176542/93‑1 (MQ=255)
cTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAcc < 1:3215908/93‑1 (MQ=255)
aTAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCt > 1:1633549/1‑93 (MQ=255)
tAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCta > 2:2566275/1‑93 (MQ=255)
tAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCta > 2:3743574/1‑93 (MQ=255)
tAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCta < 1:1132978/93‑1 (MQ=255)
aaCGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCtat > 2:2758694/1‑93 (MQ=255)
aCGCAGTCAGCATCGCCAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCtata < 2:4136187/93‑1 (MQ=255)
aCGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCtata > 2:1487568/1‑93 (MQ=255)
cGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATAc < 2:3205484/93‑1 (MQ=255)
cGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATAc > 2:2594028/1‑93 (MQ=255)
gCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATAcc > 1:2252533/1‑93 (MQ=255)
gTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCaaa > 1:535897/1‑93 (MQ=255)
gTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCaaa > 1:733424/1‑93 (MQ=255)
tCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAg < 2:494521/93‑1 (MQ=255)
tCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAg > 1:1208470/1‑93 (MQ=255)
cAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAgg < 2:1139089/93‑1 (MQ=255)
aGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGc < 2:1433899/93‑1 (MQ=255)
gCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAACCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCa < 1:4114972/93‑1 (MQ=255)
gCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCa < 1:3900236/93‑1 (MQ=255)
gCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCa > 1:2005289/1‑93 (MQ=255)
gCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCa > 2:2716943/1‑93 (MQ=255)
aTCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGt > 1:2180419/1‑93 (MQ=255)
aTCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGt < 1:83340/93‑1 (MQ=255)
cGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTgg > 1:3061744/1‑93 (MQ=255)
cGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTgg < 1:3817116/93‑1 (MQ=255)
gACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGa < 2:3277054/93‑1 (MQ=255)
gACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGa > 2:163968/1‑93 (MQ=255)
aCAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGAc < 1:4315215/93‑1 (MQ=255)
aCAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGAc > 2:2683516/1‑93 (MQ=255)
aCAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAAGCGACCTATACCGCCTATACCAAAGGCAGTGGAc > 2:422399/1‑93 (MQ=255)
aaCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACtt > 2:3687702/1‑93 (MQ=255)
aaCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACtt > 2:2503105/1‑93 (MQ=255)
aCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTa < 1:1116800/93‑1 (MQ=255)
aCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTa < 1:3761485/93‑1 (MQ=255)
aaaCCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCg < 2:2435187/93‑1 (MQ=255)
aaCCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGa > 1:3013689/1‑93 (MQ=255)
aCCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGaa < 1:2136901/93‑1 (MQ=255)
aCCAGCAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGaa < 1:2325642/93‑1 (MQ=255)
ccAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAg > 2:2423180/1‑93 (MQ=255)
ccAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAg > 2:4516404/1‑93 (MQ=255)
cAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGc > 1:2736402/1‑93 (MQ=255)
cAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGc > 2:2746484/1‑93 (MQ=255)
aGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCt < 1:780810/93‑1 (MQ=255)
ggAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTa < 1:1443303/93‑1 (MQ=255)
ggAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTa > 1:1120280/1‑93 (MQ=255)
ggAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTa > 2:18341/1‑93 (MQ=255)
ggAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTa < 2:1076703/93‑1 (MQ=255)
gAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTAt < 1:328838/93‑1 (MQ=255)
gAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTAt < 1:3106383/93‑1 (MQ=255)
gAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTAt < 1:199604/93‑1 (MQ=255)
aGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTGTACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTAtt < 1:3297090/93‑1 (MQ=255)
gTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTa > 1:1204838/1‑93 (MQ=255)
gTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTa > 2:3381934/1‑93 (MQ=255)
aCTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACTTATCCCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATg < 1:2527122/93‑1 (MQ=255)
aCTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATg > 1:2091009/1‑93 (MQ=255)
cTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGc > 2:489383/1‑93 (MQ=255)
cAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCaaa < 1:2553001/93‑1 (MQ=255)
gACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAAc < 2:2485575/93‑1 (MQ=255)
aCTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACt > 1:60422/1‑93 (MQ=255)
tGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTgg > 1:3435527/1‑93 (MQ=255)
ggAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGa > 2:19666/1‑93 (MQ=255)
gaaagaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGaa > 1:1927611/1‑93 (MQ=255)
aaagaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAAt < 2:635885/93‑1 (MQ=255)
aagaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATg > 2:3870581/1‑93 (MQ=255)
agaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGa > 2:2400485/1‑93 (MQ=255)
agaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGa > 1:2951220/1‑93 (MQ=255)
agaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGa < 2:305357/93‑1 (MQ=255)
gaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGaa < 1:175360/93‑1 (MQ=255)
gaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGaa < 2:4430980/93‑1 (MQ=255)
aagccGCAGATGGCGCCTATAAGGCGGCCTATACCGCCTATACCAAAGGCAGTGCACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAg < 2:1103881/90‑1 (MQ=255)
ccGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtt < 2:3470877/93‑1 (MQ=255)
ccGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtt > 2:2096729/1‑93 (MQ=255)
ccGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtt < 1:4497876/93‑1 (MQ=255)
ccGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtt > 1:3177924/1‑93 (MQ=255)
gCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTg > 1:1563536/1‑93 (MQ=255)
aGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCa < 1:1682030/93‑1 (MQ=255)
aGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCa < 1:546600/93‑1 (MQ=255)
aGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCa < 2:1462031/93‑1 (MQ=255)
aGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCa < 1:664883/93‑1 (MQ=255)
gATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCAt > 2:3925006/1‑93 (MQ=255)
|
AGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATAC > NC_000913/2044959‑2045136
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGG > NC_000913/2044959‑2045142
|
AGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTA > SRR4302535.3657766/1‑94 (MQ=60)
AGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTA > SRR4302535.2917496/1‑94 (MQ=60)
GGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTAT > SRR4302535.2080435/1‑94 (MQ=60)
GGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTAT > SRR4302535.495310/1‑94 (MQ=60)
GGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTAT < SRR4302535.1586449/94‑1 (MQ=60)
ACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAG > SRR4302535.11376/1‑94 (MQ=60)
ACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAG < SRR4302535.2567132/94‑1 (MQ=60)
ACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAG < SRR4302535.1591516/94‑1 (MQ=60)
ACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAG < SRR4302535.1284709/94‑1 (MQ=60)
ACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACAGCAGATGGCGCCTATAAG > SRR4302535.1821204/1‑94 (MQ=60)
CAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGG > SRR4302535.626369/1‑94 (MQ=60)
ACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACC < SRR4302535.3300688/94‑1 (MQ=60)
CAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCT < SRR4302535.141135/94‑1 (MQ=60)
AGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTA > SRR4302535.1746092/1‑94 (MQ=60)
AGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTA > SRR4302535.2887596/1‑94 (MQ=60)
CAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATA > SRR4302535.2149779/1‑94 (MQ=60)
AACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAC > SRR4302535.4234479/1‑94 (MQ=60)
ACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATATGGCGACCTATACC < SRR4302535.2550652/94‑1 (MQ=60)
ACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACC < SRR4302535.2055838/94‑1 (MQ=60)
ACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACC < SRR4302535.3949135/94‑1 (MQ=60)
CTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCG < SRR4302535.3238180/94‑1 (MQ=60)
CTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCG < SRR4302535.1184940/94‑1 (MQ=60)
GAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCC < SRR4302535.3207851/94‑1 (MQ=60)
AATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCT > SRR4302535.1645354/1‑94 (MQ=60)
TAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTAT < SRR4302535.1141066/94‑1 (MQ=60)
AACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATA > SRR4302535.150080/1‑94 (MQ=60)
AACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATA > SRR4302535.547850/1‑94 (MQ=60)
CGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACC > SRR4302535.4099999/1‑94 (MQ=60)
CGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACC > SRR4302535.2268573/1‑94 (MQ=60)
CGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACC > SRR4302535.3167586/1‑94 (MQ=60)
AGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAA > SRR4302535.738577/1‑94 (MQ=60)
AGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAA > SRR4302535.539640/1‑94 (MQ=60)
GTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAG > SRR4302535.1217155/1‑94 (MQ=60)
AGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCA > SRR4302535.2019736/1‑94 (MQ=60)
GCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAACCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAG < SRR4302535.4143139/94‑1 (MQ=60)
GCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAG < SRR4302535.3926951/94‑1 (MQ=60)
CATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGT < SRR4302535.3085216/94‑1 (MQ=60)
CATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGT > SRR4302535.2195980/1‑94 (MQ=60)
ATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTG < SRR4302535.83928/94‑1 (MQ=60)
ATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTG < SRR4302535.2083062/94‑1 (MQ=60)
TCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGG > SRR4302535.3083153/1‑94 (MQ=60)
CGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGA < SRR4302535.3843459/94‑1 (MQ=60)
GACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGAC > SRR4302535.3015107/1‑94 (MQ=60)
ACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACT < SRR4302535.4344733/94‑1 (MQ=60)
ACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACT < SRR4302535.3692260/94‑1 (MQ=60)
ACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTAC < SRR4302535.3787479/94‑1 (MQ=60)
ACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTAC < SRR4302535.1124764/94‑1 (MQ=60)
ACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTAC < SRR4302535.693071/94‑1 (MQ=60)
CGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACT < SRR4302535.4218742/94‑1 (MQ=60)
CGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGCCAGTGGCCTTACG > SRR4302535.3944921/1‑94 (MQ=60)
GTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTG > SRR4302535.3498107/1‑94 (MQ=60)
AAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGA > SRR4302535.3034810/1‑94 (MQ=60)
ACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAG < SRR4302535.2152294/94‑1 (MQ=60)
ACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAG < SRR4302535.2389280/94‑1 (MQ=60)
ACCAGCAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAG < SRR4302535.2342282/94‑1 (MQ=60)
CCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGC > SRR4302535.2755922/1‑94 (MQ=60)
CAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCT < SRR4302535.1651405/94‑1 (MQ=60)
AGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTA > SRR4302535.1128269/1‑94 (MQ=60)
AGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTA < SRR4302535.786293/94‑1 (MQ=60)
GGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTAT < SRR4302535.1453625/94‑1 (MQ=60)
GAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATT < SRR4302535.200971/94‑1 (MQ=60)
GAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATT < SRR4302535.331120/94‑1 (MQ=60)
GAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATT < SRR4302535.3128009/94‑1 (MQ=60)
AGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTGTACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTA < SRR4302535.3320012/94‑1 (MQ=60)
AGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTA > SRR4302535.1213490/1‑94 (MQ=60)
AGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTA < SRR4302535.2923366/94‑1 (MQ=60)
GTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAA > SRR4302535.1182113/1‑94 (MQ=60)
GCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAAT < SRR4302535.766465/94‑1 (MQ=60)
CACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATG > SRR4302535.2106077/1‑94 (MQ=60)
ACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACTTATCCCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGC < SRR4302535.2545327/94‑1 (MQ=60)
TACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAA < SRR4302535.1997533/94‑1 (MQ=60)
CAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAA < SRR4302535.2571382/94‑1 (MQ=60)
GACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACT > SRR4302535.60869/1‑94 (MQ=60)
CTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGG > SRR4302535.3459402/1‑94 (MQ=60)
GGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAA > SRR4302535.1941503/1‑94 (MQ=60)
AAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATG > SRR4302535.3793588/1‑94 (MQ=60)
AAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGA > SRR4302535.2971952/1‑94 (MQ=60)
AAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGA < SRR4302535.1244425/94‑1 (MQ=60)
AAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGA > SRR4302535.2297848/1‑94 (MQ=60)
GAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAG < SRR4302535.176577/94‑1 (MQ=60)
GAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAG > SRR4302535.3364862/1‑94 (MQ=60)
AACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAT > SRR4302535.2168063/1‑94 (MQ=60)
ACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATT > SRR4302535.3199905/1‑94 (MQ=60)
ACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTAGAATGAAGATT > SRR4302535.4562613/1‑94 (MQ=60)
CCGCAGATGGCGCTTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTT < SRR4302535.1212891/94‑1 (MQ=60)
CCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTT < SRR4302535.4528757/94‑1 (MQ=60)
CGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTG > SRR4302535.1574800/1‑94 (MQ=60)
AGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCAT < SRR4302535.550421/94‑1 (MQ=60)
AGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCAT < SRR4302535.669527/94‑1 (MQ=60)
AGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCAT < SRR4302535.1694213/94‑1 (MQ=60)
ATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATAC > SRR4302535.2664879/1‑94 (MQ=60)
ATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATAC < SRR4302535.497458/94‑1 (MQ=60)
ATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATAC < SRR4302535.835280/94‑1 (MQ=60)
ATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATAC > SRR4302535.4421321/1‑94 (MQ=60)
CCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGG > SRR4302535.1882039/1‑94 (MQ=60)
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AGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGG > NC_000913/2044959‑2045142
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
