Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,999,913 |
C→T |
A516V (GCC→GTC) |
b2866 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,999,913 | 0 | C | T | 100.0%
| 691.8
/ NA
| 191 | A516V (GCC→GTC) | b2866 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (100/91); total (100/91) |
Only 100 of 195 total aligned reads displayed.
TGGCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGCCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCATGC > NC_000913/2999823‑3000002
|
tggCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCt > 1:2123775/1‑93 (MQ=255)
tggCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCt < 2:3254831/93‑1 (MQ=255)
ggCAGAAACCGTGGGGGTTCCGGTCAGCGACGTCCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGtctc < 1:4613050/93‑1 (MQ=255)
gCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCa > 1:4044514/1‑93 (MQ=255)
aGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGACACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACg < 2:4286427/93‑1 (MQ=255)
gAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGc > 2:130132/1‑93 (MQ=255)
gAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGc < 2:2689259/93‑1 (MQ=255)
gAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGc > 1:3239945/1‑93 (MQ=255)
aaaCCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGcc < 1:1266912/93‑1 (MQ=255)
ccGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCCTATGTCTCAGGCCaga > 2:1893294/1‑93 (MQ=255)
ccGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCaga < 1:843718/93‑1 (MQ=255)
ccGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCaga < 2:671942/93‑1 (MQ=255)
cGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCagag > 1:3532424/1‑93 (MQ=255)
gTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGc > 1:1086918/1‑93 (MQ=255)
tGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCt > 2:3327329/1‑93 (MQ=255)
gggTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATg < 2:590785/93‑1 (MQ=255)
gTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGtt < 1:1012156/93‑1 (MQ=255)
gTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGtt < 2:2507183/93‑1 (MQ=255)
tCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGc < 2:1019472/93‑1 (MQ=255)
tCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGc < 2:907626/93‑1 (MQ=255)
ccGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGcc < 2:3955800/93‑1 (MQ=255)
cGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCcg > 1:3560423/1‑93 (MQ=255)
ggTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCcgc < 2:3669157/93‑1 (MQ=255)
tCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCgcgc > 1:497281/1‑93 (MQ=255)
tCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCgcgc > 2:1462325/1‑93 (MQ=255)
gCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctg < 2:2471151/93‑1 (MQ=255)
gACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCcttcg > 1:3203682/1‑93 (MQ=255)
gACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGACGCGCctgcg > 2:3596884/1‑93 (MQ=255)
aCGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctgcgc < 1:3056472/93‑1 (MQ=255)
aCGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctgcgc > 1:2962981/1‑93 (MQ=255)
cGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctgcgct > 1:4676000/1‑93 (MQ=255)
gTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctgcgctg > 1:3840976/1‑93 (MQ=255)
ttCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctgcgctgc > 2:4613392/1‑93 (MQ=255)
tCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctgcgctgcg > 1:2745989/1‑93 (MQ=255)
cgcgTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCtgcgctgcgc > 1:4282403/1‑93 (MQ=255)
gcgTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCa > 2:3289412/1‑93 (MQ=255)
cgTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAg < 1:2354903/93‑1 (MQ=255)
cgTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAg < 1:4514334/93‑1 (MQ=255)
cgTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAg > 2:4400584/1‑93 (MQ=255)
cgTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAg < 2:3102278/93‑1 (MQ=255)
gTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCCGt > 2:986568/1‑93 (MQ=255)
gTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGt > 1:3326386/1‑93 (MQ=255)
gTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGt > 2:3175383/1‑93 (MQ=255)
gTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGt < 2:3869414/93‑1 (MQ=255)
gTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGACGCGCCTGCGCTGCGCAGt > 2:1081020/1‑93 (MQ=255)
ttATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTg > 2:2246620/1‑93 (MQ=255)
aTTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCg > 2:643920/1‑93 (MQ=255)
tttCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCgg < 2:371543/93‑1 (MQ=255)
tttCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCgg > 1:4214952/1‑93 (MQ=255)
tCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCa > 2:2070729/1‑93 (MQ=255)
aaCTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACt > 1:2155467/1‑93 (MQ=255)
aCTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACta > 1:3695045/1‑93 (MQ=255)
aCTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACta > 2:2727960/1‑93 (MQ=255)
aCTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACta > 2:2420311/1‑93 (MQ=255)
aCTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACta < 1:3992103/93‑1 (MQ=255)
cTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtat > 2:3833346/1‑93 (MQ=255)
cTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtat < 2:4100367/93‑1 (MQ=255)
tCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtatt > 1:1934022/1‑93 (MQ=255)
tCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtatt > 2:1205237/1‑93 (MQ=255)
tCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtatt < 1:1729423/93‑1 (MQ=255)
tCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtatt < 1:3753287/93‑1 (MQ=255)
tCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtatt > 2:553295/1‑93 (MQ=255)
cAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtatta > 2:217588/1‑93 (MQ=255)
aaGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGNTGCGCAGTGCGGCACtattat > 1:1928716/1‑93 (MQ=255)
aaGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtattat > 1:826254/1‑93 (MQ=255)
aGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTattatt > 1:4181490/1‑93 (MQ=255)
aTACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTaa > 2:386204/1‑93 (MQ=255)
tgccGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTaaa < 2:3875440/91‑1 (MQ=255)
aCCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTaaaa > 2:2130765/1‑93 (MQ=255)
aCCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTaaaa < 2:1679931/93‑1 (MQ=255)
ccGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAag > 2:431932/1‑93 (MQ=255)
gACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAagag > 1:2078338/1‑93 (MQ=255)
aCGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAgaga < 1:1282172/93‑1 (MQ=255)
aCGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAgaga < 1:4327115/93‑1 (MQ=255)
aCGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAgaga > 2:1922709/1‑93 (MQ=255)
gTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGaaa < 2:803670/93‑1 (MQ=255)
gTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGaaa < 2:1648695/93‑1 (MQ=255)
ttACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAGGAGaaaa < 1:2326457/93‑1 (MQ=255)
ttACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGaaaa > 1:2251328/1‑93 (MQ=255)
tACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAat < 1:1427219/93‑1 (MQ=255)
tgCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAatca < 1:2405136/92‑1 (MQ=255)
gCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAatcat < 2:869939/93‑1 (MQ=255)
ccGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAatcatc < 1:733899/93‑1 (MQ=255)
ccGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAatcatc < 1:2199327/93‑1 (MQ=255)
cGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCg < 2:1954399/93‑1 (MQ=255)
gTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGc < 1:45890/93‑1 (MQ=255)
tCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTc < 2:4378127/93‑1 (MQ=255)
cGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCa < 2:258101/93‑1 (MQ=255)
gATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCAc > 2:2896314/1‑93 (MQ=255)
gATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCAc < 2:3778687/93‑1 (MQ=255)
aTCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCAcg < 2:344656/93‑1 (MQ=255)
aTCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCAcg > 2:1102786/1‑93 (MQ=255)
ggCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCa > 2:3213895/1‑93 (MQ=255)
gcgcATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAg > 2:531287/1‑93 (MQ=255)
gcATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTc > 2:768979/1‑93 (MQ=255)
gcATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTc > 2:1746490/1‑93 (MQ=255)
cATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCa < 2:3015187/93‑1 (MQ=255)
aTTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCAt < 2:498829/93‑1 (MQ=255)
ttGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCATGCCGCAGTCATGc > 1:1552463/1‑93 (MQ=255)
ttGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCATGc < 2:2346454/93‑1 (MQ=255)
|
TGGCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGCCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCATGC > NC_000913/2999823‑3000002
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTGGCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGCCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCATGCTA > NC_000913/2999821‑3000004
|
GGTGGCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTC > SRR4302535.1926047/1‑94 (MQ=60)
GTGGCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCT > SRR4302535.2139082/1‑94 (MQ=60)
GGCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCA > SRR4302535.4072205/1‑94 (MQ=60)
GGCAGAAACCGTGGGGGTTCCGGTCAGCGACGTCCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCA < SRR4302535.4644389/94‑1 (MQ=60)
AGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGC > SRR4302535.3262441/1‑94 (MQ=60)
AGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGC > SRR4302535.2136664/1‑94 (MQ=60)
AAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCA < SRR4302535.1275971/94‑1 (MQ=60)
AAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCA > SRR4302535.3013767/1‑94 (MQ=60)
CCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAG < SRR4302535.849647/94‑1 (MQ=60)
CCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAG > SRR4302535.3556948/1‑94 (MQ=60)
CGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGGGC > SRR4302535.2058179/1‑94 (MQ=60)
CGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGC > SRR4302535.1094645/1‑94 (MQ=60)
GGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTAT < SRR4302535.2391528/94‑1 (MQ=60)
GGGGGTTCCGGTCAGCGACGTTCGCGTGATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTAT < SRR4302535.4352897/94‑1 (MQ=60)
GGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATG < SRR4302535.1944015/94‑1 (MQ=60)
GTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTG < SRR4302535.1019351/94‑1 (MQ=60)
GTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTG < SRR4302535.1675827/94‑1 (MQ=60)
CCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCG > SRR4302535.3585111/1‑94 (MQ=60)
GTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGC > SRR4302535.760291/1‑94 (MQ=60)
GTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGC > SRR4302535.500770/1‑94 (MQ=60)
CAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCT < SRR4302535.2857260/94‑1 (MQ=60)
CGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTTCG > SRR4302535.3225868/1‑94 (MQ=60)
CGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCG > SRR4302535.4562694/1‑94 (MQ=60)
GACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGC > SRR4302535.2983780/1‑94 (MQ=60)
GACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGC > SRR4302535.3222340/1‑94 (MQ=60)
ACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCT < SRR4302535.3728309/94‑1 (MQ=60)
ACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCT < SRR4302535.3077864/94‑1 (MQ=60)
ACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCT < SRR4302535.1413769/94‑1 (MQ=60)
ACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCT > SRR4302535.4707563/1‑94 (MQ=60)
CGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTG < SRR4302535.4703720/94‑1 (MQ=60)
CGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTG > SRR4302535.3867442/1‑94 (MQ=60)
TTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCG > SRR4302535.2765561/1‑94 (MQ=60)
TCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGC > SRR4302535.4311701/1‑94 (MQ=60)
CGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCC > SRR4302535.2760872/1‑94 (MQ=60)
CGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCA > SRR4302535.462909/1‑94 (MQ=60)
GCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAG < SRR4302535.3607160/94‑1 (MQ=60)
CTTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGT < SRR4302535.180027/94‑1 (MQ=60)
CGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGT < SRR4302535.2371788/94‑1 (MQ=60)
CGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGT < SRR4302535.4545289/94‑1 (MQ=60)
CGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGT > SRR4302535.3349532/1‑94 (MQ=60)
TATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCG < SRR4302535.3273707/94‑1 (MQ=60)
TATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCG > SRR4302535.3907098/1‑94 (MQ=60)
ATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGG > SRR4302535.4243799/1‑94 (MQ=60)
TTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCA < SRR4302535.236243/94‑1 (MQ=60)
TCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCAC < SRR4302535.4040713/94‑1 (MQ=60)
CAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACT > SRR4302535.1290829/1‑94 (MQ=60)
CAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACT > SRR4302535.2170955/1‑94 (MQ=60)
AACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTA > SRR4302535.3720621/1‑94 (MQ=60)
ACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTAT < SRR4302535.4019410/94‑1 (MQ=60)
CTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATT < SRR4302535.4096360/94‑1 (MQ=60)
CTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATT < SRR4302535.21445/94‑1 (MQ=60)
CTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATT > SRR4302535.1947951/1‑94 (MQ=60)
TCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTA < SRR4302535.1741922/94‑1 (MQ=60)
TCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTA < SRR4302535.3779260/94‑1 (MQ=60)
CAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGNTGCGCAGTGCGGCACTATTAT > SRR4302535.1942616/1‑94 (MQ=60)
CAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTAT > SRR4302535.3571472/1‑94 (MQ=60)
CAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTAT < SRR4302535.127501/94‑1 (MQ=60)
CAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTAT > SRR4302535.832040/1‑94 (MQ=60)
CAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTAT < SRR4302535.2443164/94‑1 (MQ=60)
AAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATT > SRR4302535.2223193/1‑94 (MQ=60)
AAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATT > SRR4302535.4210105/1‑94 (MQ=60)
AGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTA < SRR4302535.62655/94‑1 (MQ=60)
AGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTA > SRR4302535.4292497/1‑94 (MQ=60)
CCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGA > SRR4302535.1557511/1‑94 (MQ=60)
CGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAG > SRR4302535.2093311/1‑94 (MQ=60)
GACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGA < SRR4302535.2321294/94‑1 (MQ=60)
ACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAA < SRR4302535.4356707/94‑1 (MQ=60)
ACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAA < SRR4302535.1291320/94‑1 (MQ=60)
CGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAA > SRR4302535.421636/1‑94 (MQ=60)
GTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAA > SRR4302535.2267362/1‑94 (MQ=60)
TTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAGGAGAAAAT < SRR4302535.2343102/94‑1 (MQ=60)
TTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAAT < SRR4302535.480424/94‑1 (MQ=60)
TACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATC < SRR4302535.1437408/94‑1 (MQ=60)
TGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCAT < SRR4302535.2422445/94‑1 (MQ=60)
CCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCG < SRR4302535.739056/94‑1 (MQ=60)
CCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCG < SRR4302535.2215000/94‑1 (MQ=60)
CCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCG < SRR4302535.2175429/94‑1 (MQ=60)
CGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGC < SRR4302535.3847720/94‑1 (MQ=60)
GTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCT < SRR4302535.46238/94‑1 (MQ=60)
CGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCAC > SRR4302535.4477209/1‑94 (MQ=60)
CGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTC > SRR4302535.3395940/1‑94 (MQ=60)
TTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCATGCCGCAGTCATGC > SRR4302535.1563647/1‑94 (MQ=60)
TGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCATGCTA < SRR4302535.3219992/94‑1 (MQ=60)
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GGTGGCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGCCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCATGCTA > NC_000913/2999821‑3000004
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
