Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,032,284 |
T→C |
D304G (GAT→GGT) |
lysS ← |
lysine tRNA synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,032,284 | 0 | T | C | 100.0%
| 577.0
/ NA
| 180 | D304G (GAT→GGT) | lysS | lysine tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (86/94); total (86/94) |
Only 100 of 191 total aligned reads displayed.
TTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATATCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGA > NC_000913/3032194‑3032371
|
ttGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAccc > 2:3669163/1‑93 (MQ=255)
ttGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAccc < 1:3374782/93‑1 (MQ=255)
ttGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAccc > 1:4277749/1‑93 (MQ=255)
ttGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAccc > 2:4155685/1‑93 (MQ=255)
tGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCt < 1:2317523/93‑1 (MQ=255)
gATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCtg > 2:3789636/1‑93 (MQ=255)
gATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCtg < 1:1051276/93‑1 (MQ=255)
gCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGcc > 2:444217/1‑93 (MQ=255)
cTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCa < 2:4243144/93‑1 (MQ=255)
cTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCa > 2:1128451/1‑93 (MQ=255)
ttCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCag > 2:282429/1‑93 (MQ=255)
tCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCaga < 1:342280/93‑1 (MQ=255)
cacgcacgGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCagag < 1:981829/93‑1 (MQ=255)
aCGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGt > 2:1888277/1‑93 (MQ=255)
cGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTTGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTa > 2:3792164/1‑93 (MQ=255)
cGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTa > 1:2111085/1‑93 (MQ=255)
cGCATGGTCAGTTTTACGAACGGTTTACCGAAGTGCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTGACCGAGAATACCCTGTGCCAGAGTa < 2:4333275/93‑1 (MQ=255)
gCATGGTCAGTTTTTCGAACGGTTTACAGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTAc > 2:462819/1‑93 (MQ=255)
cATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACg > 2:902532/1‑93 (MQ=255)
cATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACg > 1:2158503/1‑93 (MQ=255)
ggTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGaa < 1:4191911/93‑1 (MQ=255)
gTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGCGAATACCCTGTGCCAGAGTACGGAAc > 2:58074/1‑93 (MQ=255)
gTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAAc > 2:1871327/1‑93 (MQ=255)
gTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAAc > 2:2273757/1‑93 (MQ=255)
gTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAAc < 2:3908914/93‑1 (MQ=255)
tCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACa > 2:3338941/1‑93 (MQ=255)
tCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACa < 2:1020124/93‑1 (MQ=255)
tCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACa > 1:819790/1‑93 (MQ=255)
tCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACa < 1:2914810/93‑1 (MQ=255)
cAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAg < 1:2574406/93‑1 (MQ=255)
cAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAg < 2:3834125/93‑1 (MQ=255)
cAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAg > 2:1424843/1‑93 (MQ=255)
gTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCg > 2:1141267/1‑93 (MQ=255)
gTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCg > 2:1515008/1‑93 (MQ=255)
tttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGAtt > 2:4223351/1‑93 (MQ=255)
ttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTc < 1:854711/93‑1 (MQ=255)
ttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTc < 1:3685176/93‑1 (MQ=255)
ttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTc < 1:3524130/93‑1 (MQ=255)
ttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTc < 2:2582217/93‑1 (MQ=255)
ttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTc < 1:2840600/93‑1 (MQ=255)
tCGGACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCg < 2:3939187/93‑1 (MQ=255)
cGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCgg > 1:2884007/1‑93 (MQ=255)
gAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGt < 2:1303216/93‑1 (MQ=255)
gAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGt > 1:3138144/1‑93 (MQ=255)
agggTTTGCCGAAGTCCAGCGTCACGCCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCa < 2:1979060/91‑1 (MQ=255)
ggTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGc < 2:1710454/93‑1 (MQ=255)
ggTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGc > 1:4070924/1‑93 (MQ=255)
gTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCt < 1:3452551/93‑1 (MQ=255)
tttACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTc > 1:4561894/1‑93 (MQ=255)
aCCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGAt < 1:4597539/93‑1 (MQ=255)
aCCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGAt < 1:2186852/93‑1 (MQ=255)
cGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCa < 2:1745173/93‑1 (MQ=255)
cGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCa > 2:744541/1‑93 (MQ=255)
gAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAg < 2:4250741/93‑1 (MQ=255)
aaGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGa < 1:1960122/93‑1 (MQ=255)
aaGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGa > 1:2749725/1‑93 (MQ=255)
aGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGAt > 2:4085415/1‑93 (MQ=255)
aGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGAt < 2:6991/93‑1 (MQ=255)
aGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGAt > 2:3937799/1‑93 (MQ=255)
gTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATc > 2:2466155/1‑93 (MQ=255)
ccAGCGTCACGTCGCCGTAGGACACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGGACAGCGATTAGGTCAGCTCGATCGGCTCtt > 1:437870/1‑93 (MQ=255)
cAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCttt < 1:1672032/93‑1 (MQ=255)
aGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTg < 1:1331563/93‑1 (MQ=255)
gCGTCACGTCGCCGTATGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGt < 2:4050005/93‑1 (MQ=255)
gCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCATATCTTTGt < 2:4577654/93‑1 (MQ=255)
gCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGt > 1:2563347/1‑93 (MQ=255)
gCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGt < 1:4356430/93‑1 (MQ=255)
gCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGt > 1:1988509/1‑93 (MQ=255)
gCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGCCAGCTCGATCAGATCTTTga > 1:325129/1‑92 (MQ=255)
cACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATCCCCTGTGCCAGATTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATc < 2:3527962/93‑1 (MQ=255)
aCGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCt < 2:2954732/93‑1 (MQ=255)
cGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTg < 2:1995836/93‑1 (MQ=255)
tCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCg > 2:1187709/1‑93 (MQ=255)
ccGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTaa < 1:102143/93‑1 (MQ=255)
cGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAg < 1:1119215/93‑1 (MQ=255)
cGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAg < 2:2128102/93‑1 (MQ=255)
gTAGGTCACTTCCGTCTTACCGAGAATGCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGc < 2:2217003/93‑1 (MQ=255)
gTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGc > 2:753/1‑93 (MQ=255)
ggTCACCTCCGTCTAACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCAt < 1:1541168/93‑1 (MQ=255)
gTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATg > 2:87735/1‑93 (MQ=255)
cACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTa < 1:3128796/93‑1 (MQ=255)
cACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTa < 1:248933/93‑1 (MQ=255)
aCTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGTTTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTag < 2:4187662/93‑1 (MQ=255)
aCTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTag > 2:2691010/1‑93 (MQ=255)
cTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTaga > 2:3103757/1‑93 (MQ=255)
cTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTaga < 2:1445105/93‑1 (MQ=255)
ttCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTagag < 2:3457408/93‑1 (MQ=255)
tCCGTCTTACCGAGAATACCCTGTGACAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGt > 1:3842197/1‑93 (MQ=255)
ccGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGtt > 1:1803848/1‑93 (MQ=255)
cagTCTTACCGAGAATACCCTGTGACAGAGTACGGAACAGCGATTCGGTCAGATCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGtt > 2:2503198/3‑93 (MQ=255)
gTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTcc < 1:602283/93‑1 (MQ=255)
tCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCca > 2:2091336/1‑93 (MQ=255)
tCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCca > 2:2994663/1‑93 (MQ=255)
tCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCca < 2:2363486/93‑1 (MQ=255)
tACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcatca < 1:1641093/93‑1 (MQ=255)
tACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcatca > 1:1504347/1‑93 (MQ=255)
aCCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcatcat > 2:2553557/1‑93 (MQ=255)
aCCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcatcat < 2:2165171/93‑1 (MQ=255)
ccGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATg < 1:3625141/93‑1 (MQ=255)
agaATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTg > 2:3052872/1‑93 (MQ=255)
|
TTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATATCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGA > NC_000913/3032194‑3032371
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATATCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTCTG > NC_000913/3032191‑3032377
|
TTCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAC > SRR4302535.1774973/1‑94 (MQ=60)
TTCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAC < SRR4302535.1694374/94‑1 (MQ=60)
TTCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAC < SRR4302535.1455457/94‑1 (MQ=60)
TCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACC < SRR4302535.2645718/94‑1 (MQ=60)
TCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACC > SRR4302535.382886/1‑94 (MQ=60)
CTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCC > SRR4302535.2900448/1‑94 (MQ=60)
CTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCC > SRR4302535.4307025/1‑94 (MQ=60)
TTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCT < SRR4302535.3398255/94‑1 (MQ=60)
TGATCTCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTG < SRR4302535.2857226/94‑1 (MQ=60)
TGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTG < SRR4302535.2334111/94‑1 (MQ=60)
GATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGT < SRR4302535.1058752/94‑1 (MQ=60)
GATCGCTGCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGT < SRR4302535.4593144/94‑1 (MQ=60)
CCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCA < SRR4302535.1860819/94‑1 (MQ=60)
CTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAG > SRR4302535.2926221/1‑94 (MQ=60)
TCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAG < SRR4302535.344652/94‑1 (MQ=60)
CACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGA > SRR4302535.878155/1‑94 (MQ=60)
CACGCACGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGT < SRR4302535.988808/94‑1 (MQ=60)
ACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTA > SRR4302535.2126311/1‑94 (MQ=60)
CGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTAC < SRR4302535.4190376/94‑1 (MQ=60)
GCATTGTCAGTTTTGCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACG < SRR4302535.842656/94‑1 (MQ=60)
GCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACG > SRR4302535.2174012/1‑94 (MQ=60)
GGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAAC < SRR4302535.4220598/94‑1 (MQ=60)
GTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACA < SRR4302535.4309871/94‑1 (MQ=60)
GTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACA > SRR4302535.825545/1‑94 (MQ=60)
TCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAG < SRR4302535.2935396/94‑1 (MQ=60)
CAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGC < SRR4302535.2592909/94‑1 (MQ=60)
GTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGA < SRR4302535.3448573/94‑1 (MQ=60)
TTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTC < SRR4302535.3137647/94‑1 (MQ=60)
TTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTC < SRR4302535.2390841/94‑1 (MQ=60)
TTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCG < SRR4302535.860734/94‑1 (MQ=60)
TTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCG < SRR4302535.3710673/94‑1 (MQ=60)
TTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCG < SRR4302535.2860751/94‑1 (MQ=60)
TTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCG < SRR4302535.3548606/94‑1 (MQ=60)
TCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGG > SRR4302535.2904414/1‑94 (MQ=60)
CGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGT > SRR4302535.3704243/1‑94 (MQ=60)
CGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGT > SRR4302535.3159982/1‑94 (MQ=60)
CGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACATCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGT > SRR4302535.2527519/1‑94 (MQ=60)
CGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGC > SRR4302535.4098782/1‑94 (MQ=60)
GGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCT > SRR4302535.3163004/1‑94 (MQ=60)
GGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCT > SRR4302535.3773243/1‑94 (MQ=60)
GTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTC < SRR4302535.3476548/94‑1 (MQ=60)
GTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTC > SRR4302535.4593027/1‑94 (MQ=60)
TACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGAT < SRR4302535.3569852/94‑1 (MQ=60)
ACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATC < SRR4302535.4628816/94‑1 (MQ=60)
ACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATC < SRR4302535.2202432/94‑1 (MQ=60)
CGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAG < SRR4302535.1616649/94‑1 (MQ=60)
GAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGA > SRR4302535.2769328/1‑94 (MQ=60)
GAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGA > SRR4302535.261058/1‑94 (MQ=60)
AAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGAT < SRR4302535.1974260/94‑1 (MQ=60)
GTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTcccggggacgggaacggcgatccggtcacctcaaccagatct > SRR4302535.1455342/1‑52 (MQ=60)
TCCAGCGTCACGTCGCCGTAGGACACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGGACAGCGATTAGGTCAGCTCGATCGGCTCTT > SRR4302535.440933/1‑94 (MQ=60)
CAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTG < SRR4302535.1684133/94‑1 (MQ=60)
AGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGT < SRR4302535.1341063/94‑1 (MQ=60)
AGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGT > SRR4302535.2002828/1‑94 (MQ=60)
AGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGT > SRR4302535.2581796/1‑94 (MQ=60)
AGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGCCAGCTCGATCAGATCTTTGA > SRR4302535.327378/1‑94 (MQ=60)
GCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTA < SRR4302535.4386253/94‑1 (MQ=60)
CGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAA < SRR4302535.4439665/94‑1 (MQ=60)
CGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCGGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGGTCTTTGTAA > SRR4302535.3319803/1‑94 (MQ=60)
GTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAAT < SRR4302535.3531130/94‑1 (MQ=60)
TCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATC < SRR4302535.1679603/94‑1 (MQ=60)
CACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCT < SRR4302535.2186785/94‑1 (MQ=60)
CACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCT > SRR4302535.3431215/1‑94 (MQ=60)
CGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGC > SRR4302535.1154592/1‑94 (MQ=60)
CGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGC > SRR4302535.61507/1‑94 (MQ=60)
CCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAG < SRR4302535.102862/94‑1 (MQ=60)
CGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGC < SRR4302535.1127200/94‑1 (MQ=60)
GGTCACCTCCGTCTAACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATG < SRR4302535.1552280/94‑1 (MQ=60)
CACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAG > SRR4302535.1698890/1‑94 (MQ=60)
CACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAG < SRR4302535.1988853/94‑1 (MQ=60)
CACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAG < SRR4302535.467526/94‑1 (MQ=60)
CACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAG < SRR4302535.3150585/94‑1 (MQ=60)
CACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAG < SRR4302535.250646/94‑1 (MQ=60)
CACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAG < SRR4302535.4392519/94‑1 (MQ=60)
TTCCGTCTTACCGAGAATACCCTGTGACAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGT > SRR4302535.3868666/1‑94 (MQ=60)
TCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTT > SRR4302535.1816884/1‑94 (MQ=60)
CGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCC > SRR4302535.2267543/1‑94 (MQ=60)
GTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCA < SRR4302535.606498/94‑1 (MQ=60)
CTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATC > SRR4302535.155095/1‑94 (MQ=60)
TTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCA > SRR4302535.1515166/1‑94 (MQ=60)
TTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCA < SRR4302535.1080280/94‑1 (MQ=60)
TTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCA < SRR4302535.2583272/94‑1 (MQ=60)
TACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCAT < SRR4302535.4056826/94‑1 (MQ=60)
TACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCAT < SRR4302535.1652955/94‑1 (MQ=60)
CCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGG < SRR4302535.3650266/94‑1 (MQ=60)
AGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGA > SRR4302535.2054374/1‑94 (MQ=60)
GAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAA < SRR4302535.99745/94‑1 (MQ=60)
ACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTCT < SRR4302535.4337141/94‑1 (MQ=60)
ACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTCT < SRR4302535.3933457/94‑1 (MQ=60)
CCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTCTG < SRR4302535.737610/94‑1 (MQ=60)
CCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTCTG < SRR4302535.2069627/94‑1 (MQ=60)
|
TTCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATATCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTCTG > NC_000913/3032191‑3032377
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
