Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,032,284	T→C	D304G (GAT→GGT)	lysS ←	lysine tRNA synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,032,284	0	T	C	99.4%	1042.2 / ‑3.5	331	D304G (GAT→GGT)	lysS	lysine tRNA synthetase
Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (115/214); total (116/215)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.33e-01

Only 100 of 350 total aligned reads displayed.

TTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATATCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAAC  >  NC_000913/3032194‑3032373

ttGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAccc                                                                                         >  2:7625962/1‑93 (MQ=255)

       cTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCa                                                                                  >  1:1314830/1‑93 (MQ=255)

        ttCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCGCTTCCGTCTTACCGAGAATACCCTGTGCCag                                                                                 >  2:3834895/1‑93 (MQ=255)

         tCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCaga                                                                                <  1:7387209/93‑1 (MQ=255)

         tCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCaga                                                                                <  2:164392/93‑1 (MQ=255)

          cACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCagag                                                                               <  1:1427783/93‑1 (MQ=255)

          cACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCagag                                                                               <  1:1768816/93‑1 (MQ=255)

          cACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCagag                                                                               <  1:4721052/93‑1 (MQ=255)

           aCGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGt                                                                              <  2:5804184/93‑1 (MQ=255)

            cGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTa                                                                             <  2:3151550/93‑1 (MQ=255)

             gCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTAc                                                                            <  1:1229260/93‑1 (MQ=255)

             gCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTAc                                                                            <  1:4170696/93‑1 (MQ=255)

             gCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTAc                                                                            >  2:6366794/1‑93 (MQ=255)

                  gTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATTCCCTGTGCCAGAGTACGGAAc                                                                       <  2:683108/93‑1 (MQ=255)

                  gTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAAc                                                                       <  2:4934715/93‑1 (MQ=255)

                  gTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAAc                                                                       >  2:2782455/1‑93 (MQ=255)

                   tCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACa                                                                      <  2:7233615/93‑1 (MQ=255)

                    cAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAg                                                                     <  2:4648841/93‑1 (MQ=255)

                    cAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAg                                                                     >  2:7470927/1‑93 (MQ=255)

                     aGTTTTTCGAATGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGc                                                                    >  2:7801782/1‑93 (MQ=255)

                     aGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGc                                                                    <  2:1666891/93‑1 (MQ=255)

                      gTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAgtg                                                                   >  2:366442/1‑91 (MQ=255)

                      gTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCg                                                                   >  2:6446868/1‑93 (MQ=255)

                       tttttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGa                                                                  <  1:678659/93‑1 (MQ=255)

                        ttttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGAt                                                                 <  2:2231390/93‑1 (MQ=255)

                         tttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGAtt                                                                >  2:1566594/1‑93 (MQ=255)

                           tCGAACGGTTTACCGAAGTCCAGCGTCCCGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCg                                                              <  2:2942059/93‑1 (MQ=255)

                            cGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCgg                                                             <  2:600092/93‑1 (MQ=255)

                             gAACGGTTTACCGAAGTCCAGCGTCGCGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGt                                                            <  1:6688787/93‑1 (MQ=255)

                              aaCGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATATCCTGTGCCAGAGTACGGAACAGCGATTCGGTc                                                           <  2:7274086/93‑1 (MQ=255)

                              aaCGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTc                                                           <  2:81135/93‑1 (MQ=255)

                              aaCGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTc                                                           >  1:2363766/1‑93 (MQ=255)

                              aaCGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTc                                                           >  1:5158536/1‑93 (MQ=255)

                               aCGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCa                                                          >  2:2586999/1‑93 (MQ=255)

                                  gTTTACCGAATTCCATCGTCACGCCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCt                                                       <  1:2003208/93‑1 (MQ=255)

                                  gTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCt                                                       >  1:3987029/1‑93 (MQ=255)

                                  gTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCt                                                       >  2:6219425/1‑93 (MQ=255)

                                   tttACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTc                                                      <  2:5130990/93‑1 (MQ=255)

                                   tttACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTc                                                      <  1:2105600/93‑1 (MQ=255)

                                    ttACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAACGATTCGGTCAGCTCg                                                     >  2:4410465/1‑93 (MQ=255)

                                       ccGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATc                                                  <  2:5207191/93‑1 (MQ=255)

                                        cGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCa                                                 <  1:58466/93‑1 (MQ=255)

                                         gAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAg                                                <  1:7110891/93‑1 (MQ=255)

                                          aaGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGa                                               >  1:5644077/1‑93 (MQ=255)

                                          aaGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGa                                               <  1:814040/93‑1 (MQ=255)

                                            gTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATc                                             <  1:3356476/93‑1 (MQ=255)

                                            gTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATc                                             <  1:350258/93‑1 (MQ=255)

                                             tCCAGCGTCTCGTCGCCTTAGGTCACTTCCGTCTTACCGAGAATGCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCt                                            <  1:944145/93‑1 (MQ=255)

                                              ccAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCtt                                           <  1:5530416/93‑1 (MQ=255)

                                              ccAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCtt                                           >  1:1696185/1‑93 (MQ=255)

                                              ccAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCtt                                           <  1:2586882/93‑1 (MQ=255)

                                               cAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCttt                                          <  1:7508226/93‑1 (MQ=255)

                                                   gTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTaa                                      >  2:7423527/1‑93 (MQ=255)

                                                    tCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAAt                                     <  1:6159118/93‑1 (MQ=255)

                                                    tCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAAt                                     <  2:3085072/93‑1 (MQ=255)

                                                     cACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATc                                    <  1:5277510/93‑1 (MQ=255)

                                                      aCGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCt                                   <  2:1434364/93‑1 (MQ=255)

                                                      aCGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCt                                   >  1:3875824/1‑93 (MQ=255)

                                                       cGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTg                                  <  2:2027341/93‑1 (MQ=255)

                                                       cGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTg                                  <  1:366244/93‑1 (MQ=255)

                                                       cGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTg                                  >  2:4180655/1‑93 (MQ=255)

                                                       cGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTg                                  >  2:4250368/1‑93 (MQ=255)

                                                        gTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGc                                 <  1:4504112/93‑1 (MQ=255)

                                                        gTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGc                                 <  1:2682385/93‑1 (MQ=255)

                                                           gCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTa                              >  1:3290154/1‑93 (MQ=255)

                                                           gCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTa                              >  2:4729552/1‑93 (MQ=255)

                                                           gCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTa                              <  1:2168669/93‑1 (MQ=255)

                                                           gCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTa                              >  1:2994293/1‑93 (MQ=255)

                                                            ccGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTaa                             <  2:6714270/93‑1 (MQ=255)

                                                               tAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGcc                          <  1:5424422/93‑1 (MQ=255)

                                                                aGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCa                         <  2:359374/93‑1 (MQ=255)

                                                                aGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCa                         <  1:6940599/93‑1 (MQ=255)

                                                                aGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCa                         >  2:6594665/1‑93 (MQ=255)

                                                                 ggTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCAt                        >  2:3787739/1‑93 (MQ=255)

                                                                   tCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGt                      <  1:3141280/93‑1 (MQ=255)

                                                                    cACTTCCGTCTTACCGAGAATGCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTa                     <  1:4103459/93‑1 (MQ=255)

                                                                      cTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTaga                   <  2:3262416/93‑1 (MQ=255)

                                                                       ttCCGTCTTACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTagag                  <  1:1027795/93‑1 (MQ=255)

                                                                        tCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGt                 >  2:5724669/1‑93 (MQ=255)

                                                                         ccGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGtt                >  2:4001385/1‑93 (MQ=255)

                                                                             tttcccGAGAATACCCTGTGCCAGAATACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCTTAAGCCATGTAGAGTTCcat            <  1:6298257/89‑1 (MQ=37)

                                                                             cTTACCGAGAATATCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcat            >  1:7759912/1‑93 (MQ=255)

                                                                             cTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcat            <  2:1197016/93‑1 (MQ=255)

                                                                             cTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCAATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcat            <  2:5301805/93‑1 (MQ=255)

                                                                               tACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcatca          <  1:5099427/93‑1 (MQ=255)

                                                                               tACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcatca          <  2:2134698/93‑1 (MQ=255)

                                                                               tACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcatca          <  2:1066872/93‑1 (MQ=255)

                                                                               tACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcatca          <  2:6790376/93‑1 (MQ=255)

                                                                                 ccGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATg        <  1:595458/93‑1 (MQ=255)

                                                                                 ccGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATg        <  2:2786820/93‑1 (MQ=255)

                                                                                 ccGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATg        <  2:5569669/93‑1 (MQ=255)

                                                                                  cGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATgg       <  1:877586/93‑1 (MQ=255)

                                                                                  cGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATgg       <  1:709261/93‑1 (MQ=255)

                                                                                   gagaATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGt      <  1:976605/93‑1 (MQ=255)

                                                                                   gagaATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGt      <  2:5582535/93‑1 (MQ=255)

                                                                                    agaATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTg     <  1:7252618/93‑1 (MQ=255)

                                                                                     gaATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGa    >  2:1359848/1‑93 (MQ=255)

                                                                                      aaTACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGaa   >  2:766456/1‑93 (MQ=255)

                                                                                       atacCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAAc  <  1:6516396/93‑1 (MQ=255)

                                                                                       atacCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAAc  >  2:1829681/1‑93 (MQ=255)

TTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATATCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAAC  >  NC_000913/3032194‑3032373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATATCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTCTG  >  NC_000913/3032191‑3032377

TTCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAC                                                                                               <  SRR4302543.7557223/94‑1 (MQ=60)

TTCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAC                                                                                               >  SRR4302543.5037804/1‑94 (MQ=60)

 TCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACC                                                                                              <  SRR4302543.3574911/94‑1 (MQ=60)

 TCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACC                                                                                              >  SRR4302543.3835133/1‑94 (MQ=60)

 TCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACC                                                                                              <  SRR4302543.7462369/94‑1 (MQ=60)

 TCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACC                                                                                              <  SRR4302543.4445509/94‑1 (MQ=60)

    TGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTG                                                                                           <  SRR4302543.3308068/94‑1 (MQ=60)

    TGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTG                                                                                           >  SRR4302543.535089/1‑94 (MQ=60)

      ATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTG                                                                                         >  SRR4302543.5780402/1‑94 (MQ=60)

       TCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGC                                                                                        <  SRR4302543.2173200/94‑1 (MQ=60)

       TCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTATGC                                                                                        >  SRR4302543.3344793/1‑94 (MQ=60)

        CGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGACGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGCATACACTGTGCC                                                                                       >  SRR4302543.829633/1‑94 (MQ=60)

        CGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCC                                                                                       >  SRR4302543.829632/1‑94 (MQ=60)

         GCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCA                                                                                      >  SRR4302543.2174224/1‑94 (MQ=60)

         GCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCA                                                                                      >  SRR4302543.1326512/1‑94 (MQ=60)

          CTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAG                                                                                     <  SRR4302543.7788643/94‑1 (MQ=60)

          CTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAG                                                                                     >  SRR4302543.4557461/1‑94 (MQ=60)

          CTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAG                                                                                     <  SRR4302543.6184432/94‑1 (MQ=60)

          CTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAG                                                                                     <  SRR4302543.983942/94‑1 (MQ=60)

           TTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGA                                                                                    <  SRR4302543.2729417/94‑1 (MQ=60)

            TCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAG                                                                                   <  SRR4302543.7458189/94‑1 (MQ=60)

            TCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAG                                                                                   <  SRR4302543.2602622/94‑1 (MQ=60)

            TCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAG                                                                                   <  SRR4302543.5172632/94‑1 (MQ=60)

            TCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAG                                                                                   <  SRR4302543.148160/94‑1 (MQ=60)

             CACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGT                                                                                  <  SRR4302543.3332404/94‑1 (MQ=60)

             CACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGT                                                                                  <  SRR4302543.1784630/94‑1 (MQ=60)

             CACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGT                                                                                  <  SRR4302543.1440700/94‑1 (MQ=60)

             CACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGT                                                                                  <  SRR4302543.4582924/94‑1 (MQ=60)

             CACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGT                                                                                  <  SRR4302543.4764191/94‑1 (MQ=60)

             CACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGT                                                                                  <  SRR4302543.1440699/94‑1 (MQ=60)

               CGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTAC                                                                                <  SRR4302543.3856139/94‑1 (MQ=60)

               CGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTAC                                                                                <  SRR4302543.3900111/94‑1 (MQ=60)

               CGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTAC                                                                                <  SRR4302543.7465009/94‑1 (MQ=60)

                GCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACG                                                                               <  SRR4302543.6181145/94‑1 (MQ=60)

                GCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACG                                                                               <  SRR4302543.4208459/94‑1 (MQ=60)

                GCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACG                                                                               <  SRR4302543.1240311/94‑1 (MQ=60)

                  ATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGA                                                                             >  SRR4302543.624168/1‑94 (MQ=60)

                  ATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGA                                                                             >  SRR4302543.5157438/1‑94 (MQ=60)

                  ATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGA                                                                             <  SRR4302543.2008734/94‑1 (MQ=60)

                  ATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGA                                                                             >  SRR4302543.5545718/1‑94 (MQ=60)

                   TGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAA                                                                            >  SRR4302543.7340302/1‑94 (MQ=60)

                   TGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAA                                                                            <  SRR4302543.1547478/94‑1 (MQ=60)

                     GTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACA                                                                          >  SRR4302543.6487819/1‑94 (MQ=60)

                     GTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACA                                                                          >  SRR4302543.6514422/1‑94 (MQ=60)

                     GTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACA                                                                          <  SRR4302543.1191882/94‑1 (MQ=60)

                      TCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAG                                                                         <  SRR4302543.5607060/94‑1 (MQ=60)

                      TCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAG                                                                         <  SRR4302543.3217699/94‑1 (MQ=60)

                        AGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCG                                                                       <  SRR4302543.2143207/94‑1 (MQ=60)

                        AGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCG                                                                       >  SRR4302543.816298/1‑94 (MQ=60)

                          TTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGAT                                                                     >  SRR4302543.2027002/1‑94 (MQ=60)

                          TTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGAT                                                                     <  SRR4302543.684908/94‑1 (MQ=60)

                            TTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTC                                                                   >  SRR4302543.6967796/1‑94 (MQ=60)

                            TTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTC                                                                   <  SRR4302543.3624318/94‑1 (MQ=60)

                            TTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTC                                                                   <  SRR4302543.417305/94‑1 (MQ=60)

                              TCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGG                                                                 <  SRR4302543.7471578/94‑1 (MQ=60)

                                GAACGGTTTACCGAAGTCCAGCGTCGCGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTC                                                               <  SRR4302543.6751923/94‑1 (MQ=60)

                                GAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTC                                                               >  SRR4302543.5205155/1‑94 (MQ=60)

                                GAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTC                                                               >  SRR4302543.2385199/1‑94 (MQ=60)

                                GAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTC                                                               >  SRR4302543.2300903/1‑94 (MQ=60)

                                GAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTC                                                               <  SRR4302543.140157/94‑1 (MQ=60)

                                 AACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCA                                                              <  SRR4302543.5124242/94‑1 (MQ=60)

                                 AACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCA                                                              <  SRR4302543.3091443/94‑1 (MQ=60)

                                  ACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAG                                                             <  SRR4302543.551446/94‑1 (MQ=60)

                                  ACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAG                                                             <  SRR4302543.551445/94‑1 (MQ=60)

                                  ACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAG                                                             <  SRR4302543.6429441/94‑1 (MQ=60)

                                  ACGGTTTACCCAAGTCCAGCGTCCCGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAG                                                             <  SRR4302543.7174884/94‑1 (MQ=60)

                                    GGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCT                                                           <  SRR4302543.7320671/94‑1 (MQ=60)

                                    GGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCT                                                           >  SRR4302543.4022439/1‑94 (MQ=60)

                                    GGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCT                                                           >  SRR4302543.4022440/1‑94 (MQ=60)

                                     GTTTACCGAATTCCATCGTCACGCCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTC                                                          <  SRR4302543.2021199/94‑1 (MQ=60)

                                      TTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCG                                                         <  SRR4302543.2124440/94‑1 (MQ=60)

                                      TTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCG                                                         <  SRR4302543.4039118/94‑1 (MQ=60)

                                       TTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGA                                                        >  SRR4302543.3444348/1‑94 (MQ=60)

                                       TTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGA                                                        >  SRR4302543.3444349/1‑94 (MQ=60)

                                        TACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGAT                                                       <  SRR4302543.7290122/94‑1 (MQ=60)

                                        TACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGAT                                                       >  SRR4302543.2457144/1‑94 (MQ=60)

                                        TACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGAT                                                       >  SRR4302543.3713351/1‑94 (MQ=60)

                                        TAACGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGAT                                                       <  SRR4302543.131566/94‑1 (MQ=60)

                                           CGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAG                                                    <  SRR4302543.3966560/94‑1 (MQ=60)

                                           CGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAG                                                    <  SRR4302543.1292825/94‑1 (MQ=60)

                                           CGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAG                                                    >  SRR4302543.5826003/1‑94 (MQ=60)

                                           CGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAG                                                    <  SRR4302543.58980/94‑1 (MQ=60)

                                            GAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGA                                                   >  SRR4302543.5695526/1‑94 (MQ=60)

                                            GAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGA                                                   <  SRR4302543.7179969/94‑1 (MQ=60)

                                             AAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGAT                                                  <  SRR4302543.821207/94‑1 (MQ=60)

                                             AAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGAT                                                  <  SRR4302543.3289987/94‑1 (MQ=60)

                                             AAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGAT                                                  <  SRR4302543.5216590/94‑1 (MQ=60)

                                              AGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCcgacaggac                                                 >  SRR4302543.3244755/1‑85 (MQ=60)

                                              AGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATC                                                 <  SRR4302543.1381352/94‑1 (MQ=60)

                                               GTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCT                                                <  SRR4302543.353498/94‑1 (MQ=60)

                                               GTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCT                                                <  SRR4302543.3386681/94‑1 (MQ=60)

                                                TCCAGCGTCTCGTCGCCTTAGGTCACTTCCGTCTTACCGAGAATGCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTT                                               <  SRR4302543.952399/94‑1 (MQ=60)

                                                TCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTT                                               >  SRR4302543.1711397/1‑94 (MQ=60)

                                                 CCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTT                                              <  SRR4302543.5946060/94‑1 (MQ=60)

                                                 CCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTT                                              <  SRR4302543.7213309/94‑1 (MQ=60)

                                                 CCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTT                                              <  SRR4302543.5580661/94‑1 (MQ=60)

                                                 CCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTT                                              <  SRR4302543.6763098/94‑1 (MQ=60)

                                                 CCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTT                                              <  SRR4302543.2610411/94‑1 (MQ=60)

                                                  CAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTG                                             <  SRR4302543.1766211/94‑1 (MQ=60)

                                                  CAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTG                                             <  SRR4302543.7579976/94‑1 (MQ=60)

                                                  CAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCAATCAGATCTTTG                                             <  SRR4302543.4168053/94‑1 (MQ=60)

                                                   AGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGT                                            >  SRR4302543.91486/1‑94 (MQ=60)

                                                     CGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAA                                          >  SRR4302543.4233438/1‑94 (MQ=60)

                                                      GTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAAT                                         >  SRR4302543.5984687/1‑94 (MQ=60)

                                                      GTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAAT                                         >  SRR4302543.3143651/1‑94 (MQ=60)

                                                       TCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATC                                        <  SRR4302543.6217413/94‑1 (MQ=60)

                                                        CACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCT                                       <  SRR4302543.5325124/94‑1 (MQ=60)

                                                        CACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCT                                       <  SRR4302543.180164/94‑1 (MQ=60)

                                                        CACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCT                                       <  SRR4302543.5853068/94‑1 (MQ=60)

                                                        CACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCT                                       >  SRR4302543.3910040/1‑94 (MQ=60)

                                                         ACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTG                                      <  SRR4302543.740370/94‑1 (MQ=60)

                                                          CGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGC                                     <  SRR4302543.369631/94‑1 (MQ=60)

                                                           GTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCG                                    <  SRR4302543.2706694/94‑1 (MQ=60)

                                                           GTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCG                                    <  SRR4302543.4545061/94‑1 (MQ=60)

                                                           GTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCG                                    <  SRR4302543.4545060/94‑1 (MQ=60)

                                                            TCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGT                                   <  SRR4302543.2619753/94‑1 (MQ=60)

                                                             CGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTA                                  >  SRR4302543.3319851/1‑94 (MQ=60)

                                                             CGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTA                                  >  SRR4302543.3021467/1‑94 (MQ=60)

                                                              GCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAA                                 <  SRR4302543.2188101/94‑1 (MQ=60)

                                                               CCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAG                                <  SRR4302543.1247921/94‑1 (MQ=60)

                                                               CCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAG                                <  SRR4302543.7028423/94‑1 (MQ=60)

                                                                 GTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCC                              >  SRR4302543.6587375/1‑94 (MQ=60)

                                                                  TAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTGAGCTCAATCAGATCTTTGTAATCTGCGTAAGCCA                             <  SRR4302543.6835352/94‑1 (MQ=60)

                                                                  TAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCA                             <  SRR4302543.5291564/94‑1 (MQ=60)

                                                                  TAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCA                             <  SRR4302543.2293126/94‑1 (MQ=60)

                                                                  TAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCA                             <  SRR4302543.5473726/94‑1 (MQ=60)

                                                                  TAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCAATCAGATCTTTGTAATCTGCGTAAGCCA                             <  SRR4302543.6835353/94‑1 (MQ=60)

                                                                   AGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCAT                            <  SRR4302543.7005884/94‑1 (MQ=60)

                                                                   AGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCAT                            >  SRR4302543.2828211/1‑94 (MQ=60)

                                                                   AGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCAT                            <  SRR4302543.6051622/94‑1 (MQ=60)

                                                                   AGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCAATCAGATCTTTGTAATCTGCGTAAGCCAT                            <  SRR4302543.5351197/94‑1 (MQ=60)

                                                                      TCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTA                         <  SRR4302543.3169536/94‑1 (MQ=60)

                                                                       CACTTCCGTCTTACCGAGAATGCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAG                        <  SRR4302543.4140365/94‑1 (MQ=60)

                                                                       CACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAG                        >  SRR4302543.7810574/1‑94 (MQ=60)

                                                                       CACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAG                        <  SRR4302543.5680943/94‑1 (MQ=60)

                                                                       CACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAG                        <  SRR4302543.3448891/94‑1 (MQ=60)

                                                                        ACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGA                       <  SRR4302543.6355324/94‑1 (MQ=60)

                                                                        ACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGA                       <  SRR4302543.3653128/94‑1 (MQ=60)

                                                                         CTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAG                      <  SRR4302543.4016214/94‑1 (MQ=60)

                                                                         CTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAG                      >  SRR4302543.2439459/1‑94 (MQ=60)

                                                                          TTCCGTCTTACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGT                     <  SRR4302543.1036902/94‑1 (MQ=60)

                                                                          TTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGT                     <  SRR4302543.5020994/94‑1 (MQ=60)

                                                                          TTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGT                     >  SRR4302543.800099/1‑94 (MQ=60)

                                                                           TCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTT                    <  SRR4302543.942349/94‑1 (MQ=60)

                                                                           TCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTT                    <  SRR4302543.7164683/94‑1 (MQ=60)

                                                                             CGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCC                  >  SRR4302543.1125942/1‑94 (MQ=60)

                                                                             CGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCC                  >  SRR4302543.4311480/1‑94 (MQ=60)

                                                                              GTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCA                 >  SRR4302543.1721130/1‑94 (MQ=60)

                                                                              GTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCA                 >  SRR4302543.195084/1‑94 (MQ=60)

                                                                              GTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCA                 >  SRR4302543.7991669/1‑94 (MQ=60)

                                                                               TCTTACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCAT                <  SRR4302543.7039734/94‑1 (MQ=60)

                                                                               TCTTACCGAGAATATCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCAT                >  SRR4302543.7833143/1‑94 (MQ=60)

                                                                               TCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCAT                <  SRR4302543.2662478/94‑1 (MQ=60)

                                                                                tttcCCGAGAATACCCTGTGCCAGAATACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCTTAAGCCATGTAGAGTTCCATC               <  SRR4302543.6357533/90‑1 (MQ=60)

                                                                                CTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATC               >  SRR4302543.4835364/1‑94 (MQ=60)

                                                                                CTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATC               >  SRR4302543.6902809/1‑94 (MQ=60)

                                                                                 TTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCA              >  SRR4302543.2045809/1‑94 (MQ=60)

                                                                                 TTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCAATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCA              <  SRR4302543.6647486/94‑1 (MQ=60)

                                                                                  TACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCAT             >  SRR4302543.946702/1‑94 (MQ=60)

                                                                                  TACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCAT             <  SRR4302543.2809470/94‑1 (MQ=60)

                                                                                  TACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCAT             <  SRR4302543.5145597/94‑1 (MQ=60)

                                                                                    CCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGG           <  SRR4302543.600922/94‑1 (MQ=60)

                                                                                     CGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGT          <  SRR4302543.715706/94‑1 (MQ=60)

                                                                                     CGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGT          <  SRR4302543.709611/94‑1 (MQ=60)

                                                                                     CGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGT          <  SRR4302543.885383/94‑1 (MQ=60)

                                                                                      GAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTG         <  SRR4302543.985218/94‑1 (MQ=60)

                                                                                      GAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTG         <  SRR4302543.5268617/94‑1 (MQ=60)

                                                                                      GAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTG         <  SRR4302543.7484773/94‑1 (MQ=60)

                                                                                       AGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGA        <  SRR4302543.7322747/94‑1 (MQ=60)

                                                                                        GAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAA       <  SRR4302543.403594/94‑1 (MQ=60)

                                                                                        GAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAA       <  SRR4302543.968087/94‑1 (MQ=60)

                                                                                          ATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACT     <  SRR4302543.6577766/94‑1 (MQ=60)

                                                                                           TACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTC    <  SRR4302543.7519480/94‑1 (MQ=60)

                                                                                            ACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGACCTCT   >  SRR4302543.5441305/1‑94 (MQ=60)

                                                                                            ACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTCT   <  SRR4302543.5129428/94‑1 (MQ=60)

                                                                                            ACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTCT   >  SRR4302543.4226163/1‑94 (MQ=60)

                                                                                            ACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTCT   <  SRR4302543.3757767/94‑1 (MQ=60)

                                                                                             CCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTCTG  <  SRR4302543.4336142/94‑1 (MQ=60)

                                                                                             CCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTCTG  >  SRR4302543.2225156/1‑94 (MQ=60)

TTCTTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATATCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGAACTCTG  >  NC_000913/3032191‑3032377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`