Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,083,359 |
T→C |
H191R (CAC→CGC) |
speA ← |
biosynthetic arginine decarboxylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,083,359 | 0 | T | C | 99.5%
| 588.9
/ ‑4.5
| 186 | H191R (CAC→CGC) | speA | biosynthetic arginine decarboxylase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (97/88); minor base A (1/0); total (98/88) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.44e-01 |
Only 100 of 187 total aligned reads displayed.
CGCCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGTGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCA > NC_000913/3083270‑3083448
|
cccAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGcccc < 1:1474627/93‑1 (MQ=255)
ccAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCa > 2:4037789/1‑93 (MQ=255)
ccAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCa > 1:3982249/1‑93 (MQ=255)
cAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCAt > 1:312313/1‑93 (MQ=255)
aGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCAtc < 1:2820087/93‑1 (MQ=255)
cGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCAtcttc > 2:3794971/1‑93 (MQ=255)
gAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCAtcttct > 2:1996740/1‑93 (MQ=255)
gAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCAtcttct < 1:4264614/93‑1 (MQ=255)
ggAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCg > 2:2442415/1‑93 (MQ=255)
gAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGc < 1:500207/93‑1 (MQ=255)
aCGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCCATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCa > 1:1021994/1‑93 (MQ=255)
aCGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCa > 1:3566633/1‑93 (MQ=255)
cGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCaa > 1:1010261/1‑93 (MQ=255)
gACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAAt > 1:4553051/1‑93 (MQ=255)
gACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAAt < 1:980984/93‑1 (MQ=255)
gACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAAt < 2:1084762/93‑1 (MQ=255)
gACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGAGCCCCATCTTCTCGCCAAt > 1:3343275/1‑93 (MQ=255)
cATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTa > 1:3738210/1‑93 (MQ=255)
cATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTa < 2:4127546/93‑1 (MQ=255)
aTTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTaa < 1:2053276/93‑1 (MQ=255)
aTTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTaa > 2:133636/1‑93 (MQ=255)
ttCAGACGTTCTGCTTCATCAAGCACAATGGCTATTTCTGACATCTCCTCAATGACAAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAAt < 2:2500624/93‑1 (MQ=255)
cAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGc < 2:2356456/93‑1 (MQ=255)
aGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGcc > 1:158897/1‑93 (MQ=255)
gACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCa > 1:2295327/1‑93 (MQ=255)
gACGTGCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCa < 1:1909623/93‑1 (MQ=255)
cTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGa < 1:1665306/93‑1 (MQ=255)
tGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGat > 2:588169/1‑93 (MQ=255)
tGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGat > 2:3553421/1‑93 (MQ=255)
gCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGata < 1:1179901/93‑1 (MQ=255)
gCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGata < 1:133570/93‑1 (MQ=255)
gCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGata > 1:2379701/1‑93 (MQ=255)
cTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGatat > 1:2498225/1‑93 (MQ=255)
cTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGatat < 2:4457812/93‑1 (MQ=255)
ttCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGatata < 2:1635281/93‑1 (MQ=255)
tCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGatatat < 2:3421186/93‑1 (MQ=255)
tCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGatatat < 1:2013226/93‑1 (MQ=255)
cATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATAtt < 2:2944009/93‑1 (MQ=255)
cATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATAtt < 2:3017289/93‑1 (MQ=255)
cATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATAtt < 2:875952/93‑1 (MQ=255)
aTCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTc > 2:2664839/1‑93 (MQ=255)
tCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTcg > 1:2982572/1‑93 (MQ=255)
cAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCACTTAATGCCAGGCGGATATATTcgcg > 2:1739795/1‑93 (MQ=255)
cAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTcgcg > 2:3941743/1‑93 (MQ=255)
gCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGt > 1:4374973/1‑93 (MQ=255)
acaATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCt > 1:4071479/1‑93 (MQ=255)
acaATAGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCt > 2:450751/1‑93 (MQ=255)
caATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCtt < 1:2696638/93‑1 (MQ=255)
caATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCtt < 2:3731943/93‑1 (MQ=255)
caATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCtt < 2:3144289/93‑1 (MQ=255)
caATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAAATAATGCCAGGCGGATATATTCGCGGTCtt < 2:3466358/93‑1 (MQ=255)
aTGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTta < 1:1767651/93‑1 (MQ=255)
aTGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTta < 2:3055475/93‑1 (MQ=255)
aTGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTta > 2:1849393/1‑93 (MQ=255)
aTGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTAGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTta > 2:3824567/1‑93 (MQ=255)
tGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTtat > 2:2587187/1‑93 (MQ=255)
tGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTtat > 1:2508974/1‑93 (MQ=255)
tGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTtat < 1:363493/93‑1 (MQ=255)
gCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATaa < 2:429601/93‑1 (MQ=255)
cGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAAc < 2:1482507/93‑1 (MQ=255)
aTTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCg > 2:1919123/1‑93 (MQ=255)
tttCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGt > 1:3074227/1‑93 (MQ=255)
tttCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGt > 1:4450423/1‑93 (MQ=255)
ttCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGtt < 2:1879519/93‑1 (MQ=255)
tCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTg > 2:1447382/1‑93 (MQ=255)
gACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAg > 2:4353497/1‑93 (MQ=255)
cATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGAc < 1:3543849/93‑1 (MQ=255)
tcttctCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGa < 1:1918534/93‑1 (MQ=255)
tttctCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGAt < 1:2627375/92‑1 (MQ=255)
cttctCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGAt < 1:2675940/93‑1 (MQ=255)
ctcAATGACCAGATAGACCTTGCGCCCCATCGTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGAc < 1:3003311/93‑1 (MQ=255)
tcAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGTTGACg > 2:224601/1‑93 (MQ=255)
tcAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACg > 2:4386746/1‑93 (MQ=255)
cAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGc < 1:1096808/93‑1 (MQ=255)
aaTGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCt > 2:387194/1‑93 (MQ=255)
aaTGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCt > 1:1997435/1‑93 (MQ=255)
aaTGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCt > 1:4495450/1‑93 (MQ=255)
aTGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTa < 1:3744802/93‑1 (MQ=255)
tGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATTTATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTAc < 1:2926749/93‑1 (MQ=255)
tGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTAc < 2:2729480/93‑1 (MQ=255)
gACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACg < 1:712988/93‑1 (MQ=255)
ccAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACggg < 1:3211666/93‑1 (MQ=255)
gATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCa < 1:1737498/93‑1 (MQ=255)
gATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCa > 2:2965777/1‑93 (MQ=255)
gATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCa > 2:1721276/1‑93 (MQ=255)
gATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCa > 1:842612/1‑93 (MQ=255)
gATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCa < 1:3923248/93‑1 (MQ=255)
aTAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCAt > 1:160097/1‑93 (MQ=255)
aTAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCAt < 1:4648027/93‑1 (MQ=255)
aTAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTCTATAACCGTTGCAGACGATGACGCTACGGGTCAt > 1:828763/1‑93 (MQ=255)
tAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATg > 1:2065326/1‑93 (MQ=255)
gACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGcc < 2:2810843/93‑1 (MQ=255)
gACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGcc > 1:1828868/1‑93 (MQ=255)
ccTTGCGCCCCATCTTCTCACCAATTAATGCCATGCGGATATATTCGCGGTCTTTATAACCGTTGCACACGCTGACGCTACGGGTCATGCCac > 2:4568827/1‑92 (MQ=255)
cTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGc > 1:1415419/1‑93 (MQ=255)
ttGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCa < 1:2841021/93‑1 (MQ=255)
ttGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCa > 2:2043465/1‑93 (MQ=255)
ttGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCa < 1:655549/93‑1 (MQ=255)
ttGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCa > 2:754342/1‑93 (MQ=255)
ttGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCa > 1:433630/1‑93 (MQ=255)
|
CGCCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGTGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCA > NC_000913/3083270‑3083448
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGCCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGTGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCATGTG > NC_000913/3083269‑3083452
|
ACGCCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCC > SRR4302535.4273757/1‑94 (MQ=60)
CCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCA < SRR4302535.1485186/94‑1 (MQ=60)
CCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCA > SRR4302535.4009458/1‑94 (MQ=60)
CCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCAT > SRR4302535.314477/1‑94 (MQ=60)
AGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCT < SRR4302535.242270/94‑1 (MQ=60)
AGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCT < SRR4302535.2840116/94‑1 (MQ=60)
AGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCT > SRR4302535.4461120/1‑94 (MQ=60)
CGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCT < SRR4302535.3019051/94‑1 (MQ=60)
GAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTC < SRR4302535.4293820/94‑1 (MQ=60)
GAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCC < SRR4302535.503711/94‑1 (MQ=60)
AACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCCATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCA > SRR4302535.1029253/1‑94 (MQ=60)
AACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCA > SRR4302535.3591358/1‑94 (MQ=60)
ACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAA < SRR4302535.820188/94‑1 (MQ=60)
ACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAA > SRR4302535.1017438/1‑94 (MQ=60)
CGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAAT > SRR4302535.4584161/1‑94 (MQ=60)
CGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGAGCCCCATCTTCTCGCCAAT > SRR4302535.3366568/1‑94 (MQ=60)
GACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATT < SRR4302535.987954/94‑1 (MQ=60)
ACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTA > SRR4302535.401200/1‑94 (MQ=60)
ACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTA > SRR4302535.3764081/1‑94 (MQ=60)
ATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAAT < SRR4302535.2068065/94‑1 (MQ=60)
TCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGC < SRR4302535.591282/94‑1 (MQ=60)
TCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGC > SRR4302535.2640896/1‑94 (MQ=60)
CAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCC > SRR4302535.160014/1‑94 (MQ=60)
AGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCA < SRR4302535.1754274/94‑1 (MQ=60)
AGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCA > SRR4302535.2311744/1‑94 (MQ=60)
GACGTGCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAG < SRR4302535.1923388/94‑1 (MQ=60)
TTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGAT < SRR4302535.3956290/94‑1 (MQ=60)
CTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGAT > SRR4302535.31283/1‑94 (MQ=60)
CTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGAT < SRR4302535.1677356/94‑1 (MQ=60)
TGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATA > SRR4302535.2396789/1‑94 (MQ=60)
TGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATA > SRR4302535.3936581/1‑94 (MQ=60)
GCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATAT > SRR4302535.2516248/1‑94 (MQ=60)
GCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATAT < SRR4302535.134505/94‑1 (MQ=60)
GCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATAT < SRR4302535.1188321/94‑1 (MQ=60)
CTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATA < SRR4302535.2079312/94‑1 (MQ=60)
CTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATA > SRR4302535.4548541/1‑94 (MQ=60)
TCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATT < SRR4302535.2027729/94‑1 (MQ=60)
ATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCTAATTAATGCCAGGCGGATATATTCG < SRR4302535.2991090/94‑1 (MQ=60)
ATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCG < SRR4302535.3427058/94‑1 (MQ=60)
ATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCG > SRR4302535.1363755/1‑94 (MQ=60)
ATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCG < SRR4302535.4394647/94‑1 (MQ=60)
ATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCG > SRR4302535.3003493/1‑94 (MQ=60)
AGCACAATGGCGATTTCTGACATCTTCTCAATGACCANATAGACCTTGCGCNCCNTCTTCTCGNCAATTAATGCNAGGCGNANATNTNCNCNGT > SRR4302535.521085/1‑94 (MQ=60)
AGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGT > SRR4302535.4404906/1‑94 (MQ=60)
GCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTC < SRR4302535.1202883/94‑1 (MQ=60)
CACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCT > SRR4302535.4099341/1‑94 (MQ=60)
CAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTT < SRR4302535.358084/94‑1 (MQ=60)
CAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTT < SRR4302535.1682780/94‑1 (MQ=60)
CAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTT < SRR4302535.1062655/94‑1 (MQ=60)
CAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTT < SRR4302535.2715914/94‑1 (MQ=60)
AATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTA > SRR4302535.4700384/1‑94 (MQ=60)
AATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTA < SRR4302535.367432/94‑1 (MQ=60)
AATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTA > SRR4302535.4616531/1‑94 (MQ=60)
ATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTAT < SRR4302535.1780468/94‑1 (MQ=60)
ATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTAT < SRR4302535.2843211/94‑1 (MQ=60)
ATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTAT > SRR4302535.2527059/1‑94 (MQ=60)
TGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATA < SRR4302535.365997/94‑1 (MQ=60)
GGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAA < SRR4302535.1860249/94‑1 (MQ=60)
GCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAAC < SRR4302535.2034998/94‑1 (MQ=60)
GCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAAC > SRR4302535.2702533/1‑94 (MQ=60)
CGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACC > SRR4302535.146351/1‑94 (MQ=60)
GATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCG > SRR4302535.1518421/1‑94 (MQ=60)
ATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGT > SRR4302535.4480946/1‑94 (MQ=60)
ATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGT > SRR4302535.3095682/1‑94 (MQ=60)
TTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTT < SRR4302535.3632389/94‑1 (MQ=60)
CATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACG > SRR4302535.2275868/1‑94 (MQ=60)
CATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACG < SRR4302535.3568464/94‑1 (MQ=60)
TCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGAT < SRR4302535.1932359/94‑1 (MQ=60)
ACTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGAT < SRR4302535.319573/94‑1 (MQ=60)
TTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATG < SRR4302535.2646205/94‑1 (MQ=60)
CTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATG < SRR4302535.2695086/94‑1 (MQ=60)
TCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGAC < SRR4302535.1122974/94‑1 (MQ=60)
CTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACG > SRR4302535.2920788/1‑94 (MQ=60)
CTCAATGACCAGATAGACCTTGCGCCCCATCGTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACG < SRR4302535.3024365/94‑1 (MQ=60)
CAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCT > SRR4302535.2011818/1‑94 (MQ=60)
CAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCT > SRR4302535.1962409/1‑94 (MQ=60)
CAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCT > SRR4302535.4526308/1‑94 (MQ=60)
CAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCT < SRR4302535.1104618/94‑1 (MQ=60)
ATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTAC < SRR4302535.3770711/94‑1 (MQ=60)
TGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATTTATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACG < SRR4302535.2947378/94‑1 (MQ=60)
TGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACG < SRR4302535.1793325/94‑1 (MQ=60)
GACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGG < SRR4302535.717994/94‑1 (MQ=60)
ACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGG < SRR4302535.3268919/94‑1 (MQ=60)
ACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGG > SRR4302535.1622140/1‑94 (MQ=60)
CCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGT > SRR4302535.71345/1‑94 (MQ=60)
CCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGT < SRR4302535.3233909/94‑1 (MQ=60)
CAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCTGACGATGACGCTACGGGTC > SRR4302535.252047/1‑94 (MQ=60)
AGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCA > SRR4302535.848532/1‑94 (MQ=60)
GATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCAT > SRR4302535.4355403/1‑94 (MQ=60)
GATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCAT < SRR4302535.1750056/94‑1 (MQ=60)
GATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCAT > SRR4302535.2823669/1‑94 (MQ=60)
GATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCAT < SRR4302535.3950060/94‑1 (MQ=60)
GATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCAT > SRR4302535.161220/1‑94 (MQ=60)
GATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTCTATAACCGTTGCAGACGATGACGCTACGGGTCAT > SRR4302535.834570/1‑94 (MQ=60)
ATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATG < SRR4302535.4679511/94‑1 (MQ=60)
ATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATG > SRR4302535.2080215/1‑94 (MQ=60)
AGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCC > SRR4302535.1842070/1‑94 (MQ=60)
GACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCA > SRR4302535.2352442/1‑94 (MQ=60)
GACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCA > SRR4302535.1929437/1‑94 (MQ=60)
ACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAG > SRR4302535.964168/1‑94 (MQ=60)
CCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGC > SRR4302535.1425524/1‑94 (MQ=60)
CTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCA > SRR4302535.436650/1‑94 (MQ=60)
TTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCAT < SRR4302535.660127/94‑1 (MQ=60)
TTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCAT < SRR4302535.2861173/94‑1 (MQ=60)
TGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCATG < SRR4302535.4536481/94‑1 (MQ=60)
TGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCATG < SRR4302535.2938162/94‑1 (MQ=60)
CGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCATGTG > SRR4302535.722897/1‑94 (MQ=60)
CGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCATGTG > SRR4302535.621606/1‑94 (MQ=60)
|
ACGCCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGTGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCATGTG > NC_000913/3083269‑3083452
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
